F376382

General Info

Members Datasets Scaffolds Average Seq Length
269 204 538 247

Family's Representative Sequence

Representative Sequence 3300041512|Ga0451853_3050226|Ga0451853_3050226_213_1064
Length 283
Sequence LPRLRGRFSRGRRKLPFFLRYRFESAGKIIAMTSIAAVPHAPTAILSALAEEQSGLIDLMENARQVKHAGREFWLGALHGHPVVLVLARIGKVAAATTAVALIEHFKVGRIVFTGVAGGLGESVNVGDVVVADSFVQHDMDASPLFPRYEVPLYGKTVFESNAALTALLHAAALAAGTVPAYPAARVHRGLVISGDRFVCGAQEAAGIRAALIAAGHAPMAVEMEGAAVAQVCHDYGVAFASVRTISDRADDTAHVDFPAFVAEVASVYARAIVEKLLPAVTV

Samples

Sample ID Description Type Environment
1 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
11 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
12 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
45 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
49 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
50 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
53 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
69 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
70 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
71 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
73 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
76 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
83 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
113 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
114 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
115 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
116 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
117 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
118 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
121 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
122 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
123 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
128 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
129 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
130 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
131 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
132 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
133 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
134 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
137 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
138 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
139 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
140 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
141 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
142 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
143 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
144 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
145 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
146 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
147 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
148 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
149 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
150 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
151 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
152 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
153 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
154 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
155 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
156 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
157 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
158 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
169 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
170 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
174 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
175 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
176 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
177 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
178 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
179 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
180 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
181 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
182 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
183 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
184 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
185 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
186 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
187 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
188 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
189 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
190 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
191 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
192 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
193 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
194 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
195 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
196 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
197 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
198 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
199 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
200 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
201 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
202 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
203 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
204 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.51
Metatranscriptomes 0
Isolates 1.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 36.8
Nodule 0
Rhizoplane 3.72
Rhizosphere 48.7
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451853_3050226 3300041512 Bacteria 1376
2 JGI25156J39149_1000266 3300002705 Bacteria 35297
3 JGI25154J39366_1000667 3300002738 Bacteria 16007
4 JGI25157J39369_1000026 3300002741 Bacteria 148982
5 JGI25159J45721_1004516 3300002987 Bacteria 4600
6 JGI25151J46595_10002989 3300003187 Bacteria 9641
7 JGI25151J46595_10006986 3300003187 Bacteria 5587
8 rootH2_10024744 3300003320 Bacteria 6915
9 rootL2_10140265 3300003322 Bacteria 4667
10 rootL2_10176132 3300003322 Bacteria 2571
11 rootH1_10008686 3300003323 Bacteria 9064
12 rootH1_10081789 3300003323 Bacteria 1770
13 rootH1_10095706 3300003323 Bacteria 3921
14 JGI25160J50197_1000188 3300003354 Bacteria 52036
15 JGI25161J50226_1000007 3300003374 Bacteria 256181
16 Ga0055539_1011091 3300003752 Bacteria 1113
17 Ga0055526_1002015 3300003771 Bacteria 13974
18 Ga0055526_1003935 3300003771 Bacteria 9173
19 Ga0055537_1000243 3300003773 Bacteria 39987
20 Ga0055524_1000213 3300003775 Bacteria 61225
21 Ga0055536_1000526 3300003781 Bacteria 26477
22 Ga0055534_1002616 3300003784 Bacteria 6133
23 Ga0055528_1000316 3300003790 Bacteria 40688
24 Ga0055530_10001521 3300003791 Bacteria 16748
25 Ga0055530_10003710 3300003791 Bacteria 8501
26 Ga0055540_1000176 3300003792 Bacteria 63046
27 Ga0055531_10000850 3300003794 Bacteria 25221
28 Ga0055531_10001384 3300003794 Bacteria 17989
29 Ga0055543_1000842 3300004625 Bacteria 14843
30 Ga0065165_1013300 3300005262 Bacteria 3283
31 Ga0065165_1018310 3300005262 Bacteria 2540
32 Ga0065165_1023985 3300005262 Bacteria 2058
33 Ga0070690_100355527 3300005330 Bacteria 1064
34 Ga0068869_100070058 3300005334 Bacteria 2594
35 Ga0070660_100248213 3300005339 Bacteria 1451
36 Ga0070660_100337731 3300005339 Bacteria 1239
37 Ga0070669_100071515 3300005353 Bacteria 2567
38 Ga0070675_100133166 3300005354 Bacteria 2120
39 Ga0070671_100063727 3300005355 Bacteria 3070
40 Ga0070659_100030625 3300005366 Bacteria 4164
41 Ga0070667_100088509 3300005367 Bacteria 2659
42 Ga0070667_100103185 3300005367 Bacteria 2465
43 Ga0070667_100254461 3300005367 Bacteria 1571
44 Ga0070714_100202631 3300005435 Bacteria 1816
45 Ga0070678_100077182 3300005456 Bacteria 2512
46 Ga0070662_100045789 3300005457 Bacteria 3140
47 Ga0070679_100026575 3300005530 Bacteria 5690
48 Ga0068853_100320904 3300005539 Bacteria 1436
49 Ga0070672_100031163 3300005543 Bacteria 4012
50 Ga0070665_100288339 3300005548 Bacteria 1644
51 Ga0068855_100023374 3300005563 Bacteria 7403
52 Ga0068855_100029345 3300005563 Bacteria 6577
53 Ga0068857_100004275 3300005577 Bacteria 12044
54 Ga0068854_100003679 3300005578 Bacteria 9595
55 Ga0068854_100013352 3300005578 Bacteria 5388
56 Ga0068856_100004474 3300005614 Bacteria 13908
57 Ga0068852_100085146 3300005616 Bacteria 2815
58 Ga0068859_100882425 3300005617 Bacteria 980
59 Ga0068864_100092639 3300005618 Bacteria 2668
60 Ga0068863_100296513 3300005841 Bacteria 1568
61 Ga0075365_10010924 3300006038 Bacteria 5317
62 Ga0075365_10338943 3300006038 Bacteria 1059
63 Ga0075368_10011662 3300006042 Bacteria 3201
64 Ga0075368_10020773 3300006042 Bacteria 2489
65 Ga0075363_100116269 3300006048 Bacteria 1490
66 Ga0075362_10003388 3300006177 Bacteria 5560
67 Ga0075367_10013897 3300006178 Bacteria 4343
68 Ga0075367_10261893 3300006178 Bacteria 1085
69 Ga0075369_10009356 3300006186 Bacteria 3805
70 Ga0075369_10080749 3300006186 Bacteria 1442
71 Ga0075366_10061247 3300006195 Bacteria 2236
72 Ga0075366_10099303 3300006195 Bacteria 1746
73 Ga0075366_10137437 3300006195 Bacteria 1476
74 Ga0068865_100327480 3300006881 Bacteria 1234
75 Ga0097620_100882422 3300006931 Bacteria 980
76 Ga0105244_10013573 3300009036 Bacteria 4752
77 Ga0105240_10000945 3300009093 Bacteria 51693
78 Ga0105240_10018521 3300009093 Bacteria 9348
79 Ga0105240_10086376 3300009093 Bacteria 3842
80 Ga0105241_10066951 3300009174 Bacteria 2779
81 Ga0105248_10004153 3300009177 Bacteria 16021
82 Ga0105237_10077787 3300009545 Bacteria 3307
83 Ga0105238_10042588 3300009551 Bacteria 4597
84 Ga0105239_10042880 3300010375 Bacteria 4958
85 Ga0105239_10211865 3300010375 Bacteria 2172
86 Ga0157369_10137886 3300013105 Bacteria 2582
87 Ga0157372_10084992 3300013307 Bacteria 3588
88 Ga0157380_10282301 3300014326 Bacteria 1520
89 Ga0163161_10385306 3300017792 Bacteria 1121
90 Ga0209258_100442 3300025242 Bacteria 46898
91 Ga0207425_1002808 3300025245 Bacteria 5880
92 Ga0209646_1000012 3300025246 Bacteria 573300
93 Ga0209026_1000004 3300025250 Bacteria 949012
94 Ga0209677_100079 3300025253 Bacteria 121137
95 Ga0209759_1000003 3300025256 Bacteria 792130
96 Ga0209565_1000026 3300025263 Bacteria 365910
97 Ga0209673_1000009 3300025273 Bacteria 620735
98 Ga0209130_1000289 3300025284 Bacteria 61485
99 Ga0209130_1001571 3300025284 Bacteria 14386
100 Ga0209675_1000473 3300025291 Bacteria 30855
101 Ga0209676_1000013 3300025292 Bacteria 816080
102 Ga0209676_1008088 3300025292 Bacteria 4774
103 Ga0209025_1000728 3300025294 Bacteria 55852
104 Ga0209025_1006033 3300025294 Bacteria 9587
105 Ga0209025_1012088 3300025294 Bacteria 5587
106 Ga0209564_1000579 3300025295 Bacteria 58010
107 Ga0209564_1000620 3300025295 Bacteria 54301
108 Ga0209564_1012266 3300025295 Bacteria 3751
109 Ga0209050_1000008 3300025298 Bacteria 1144179
110 Ga0209050_1002038 3300025298 Bacteria 18671
111 Ga0209256_1000003 3300025299 Bacteria 1661127
112 Ga0207426_1000091 3300025302 Bacteria 280561
113 Ga0207426_1004353 3300025302 Bacteria 6957
114 Ga0209051_1000005 3300025303 Bacteria 1142353
115 Ga0209257_1000048 3300025304 Bacteria 455536
116 Ga0207695_10008295 3300025913 Bacteria 13026
117 Ga0207695_10025953 3300025913 Bacteria 6548
118 Ga0207695_10060988 3300025913 Bacteria 3900
119 Ga0207671_10036704 3300025914 Bacteria 3635
120 Ga0207660_10441674 3300025917 Bacteria 1051
121 Ga0207657_10029593 3300025919 Bacteria 4983
122 Ga0207652_10253712 3300025921 Bacteria 1586
123 Ga0207681_10011540 3300025923 Bacteria 5428
124 Ga0207694_10233537 3300025924 Bacteria 1502
125 Ga0207659_10128414 3300025926 Bacteria 1953
126 Ga0207664_10061356 3300025929 Bacteria 2999
127 Ga0207644_10055670 3300025931 Bacteria 2852
128 Ga0207706_10054954 3300025933 Bacteria 3513
129 Ga0207709_10050226 3300025935 Bacteria 2549
130 Ga0207704_10280710 3300025938 Bacteria 1266
131 Ga0207691_10070010 3300025940 Bacteria 3168
132 Ga0207711_10006876 3300025941 Bacteria 9551
133 Ga0207667_10002877 3300025949 Bacteria 21376
134 Ga0207667_10029595 3300025949 Bacteria 5937
135 Ga0207667_10252524 3300025949 Bacteria 1804
136 Ga0207668_10699340 3300025972 Bacteria 891
137 Ga0207640_10110328 3300025981 Bacteria 1949
138 Ga0207640_10201072 3300025981 Bacteria 1510
139 Ga0207658_10103942 3300025986 Bacteria 2231
140 Ga0207658_10242785 3300025986 Bacteria 1527
141 Ga0207639_10249554 3300026041 Bacteria 1547
142 Ga0207702_10000033 3300026078 Bacteria 166621
143 Ga0207702_10000039 3300026078 Bacteria 152825
144 Ga0207702_10000058 3300026078 Bacteria 130860
145 Ga0207641_10340231 3300026088 Bacteria 1428
146 Ga0207641_10358869 3300026088 Bacteria 1391
147 Ga0207676_10235200 3300026095 Bacteria 1640
148 Ga0207674_10015667 3300026116 Bacteria 8323
149 Ga0207674_10024682 3300026116 Bacteria 6419
150 Ga0207674_10113642 3300026116 Bacteria 2680
151 Ga0207675_101097190 3300026118 Bacteria 815
152 Ga0207683_10274137 3300026121 Bacteria 1541
153 Ga0207698_10124558 3300026142 Bacteria 2189
154 Ga0207698_10603318 3300026142 Bacteria 1082
155 Ga0265336_10000011 3300028666 Bacteria 275816
156 Ga0307515_10003726 3300028794 Bacteria 31986
157 Ga0265324_10000746 3300029957 Bacteria 21625
158 Ga0307512_10096620 3300030522 Bacteria 2025
159 Ga0265328_10004635 3300031239 Bacteria 5952
160 Ga0265328_10014855 3300031239 Bacteria 3059
161 Ga0265327_10000622 3300031251 Bacteria 58359
162 Ga0307513_10000653 3300031456 Bacteria 49874
163 Ga0307513_10108188 3300031456 Bacteria 2781
164 Ga0307408_100487921 3300031548 Bacteria 1076
165 Ga0307514_10001452 3300031649 Bacteria 28909
166 Ga0307514_10023711 3300031649 Bacteria 4975
167 Ga0307516_10003970 3300031730 Bacteria 18575
168 Ga0307405_10605366 3300031731 Bacteria 895
169 Ga0307416_100235100 3300032002 Bacteria 1770
170 Ga0373925_0469558 3300037068 Bacteria 1032
171 Ga0395898_0023384 3300037466 Bacteria 6247
172 Ga0395905_0000117 3300037471 Bacteria 133291
173 Ga0395905_0009124 3300037471 Bacteria 9717
174 Ga0395905_0009898 3300037471 Bacteria 9292
175 Ga0395905_0047224 3300037471 Bacteria 4036
176 Ga0395901_0009538 3300038443 Bacteria 9849
177 Ga0436363_1662204 3300039450 Bacteria 3778
178 Ga0451804_0098915 3300041463 Bacteria 1130
179 Ga0451835_0203744 3300041492 Bacteria 1124
180 Ga0439449_0020686 3300042007 Bacteria 2465
181 Ga0450894_014138 3300042131 Bacteria 1052
182 Ga0450898_002577 3300042134 Bacteria 2540
183 Ga0450893_0029453 3300042532 Bacteria 974
184 Ga0451577_0466520 3300042876 Bacteria 1147
185 Ga0466969_0000007 3300044656 Bacteria 152114
186 Ga0466966_0072811 3300044684 Bacteria 2150
187 Ga0466966_0290767 3300044684 Bacteria 982
188 Ga0466961_0186893 3300044693 Bacteria 1285
189 Ga0466959_0067417 3300045049 Bacteria 2595
190 Ga0495638_0057311 3300046460 Bacteria 2416
191 Ga0495650_0040462 3300046471 Bacteria 2000
192 Ga0495610_0006682 3300046512 Bacteria 7860
193 Ga0495616_0001625 3300046513 Bacteria 15400
194 Ga0495620_0010354 3300046515 Bacteria 4921
195 Ga0495631_0000462 3300046518 Bacteria 27592
196 Ga0495637_0027168 3300046520 Bacteria 2563
197 Ga0495652_0470807 3300046529 Bacteria 876
198 Ga0495654_0001949 3300046530 Bacteria 13639
199 Ga0495654_0013929 3300046530 Bacteria 4290
200 Ga0495621_0001511 3300046539 Bacteria 6036
201 Ga0495622_0108661 3300046557 Bacteria 1270
202 Ga0495588_0404586 3300046674 Bacteria 716
203 Ga0495658_0059576 3300046683 Bacteria 2187
204 Ga0495670_0179251 3300046691 Bacteria 1118
205 Ga0495671_0004925 3300046692 Bacteria 7887
206 Ga0495660_0065027 3300046810 Bacteria 1948
207 Ga0495676_0007697 3300047321 Bacteria 9879
208 Ga0495593_0089831 3300047673 Bacteria 1582
209 Ga0495614_0012770 3300048089 Bacteria 3686
210 Ga0496102_0541329 3300048905 Bacteria 1087
211 Ga0496104_0068246 3300048907 Bacteria 3379
212 Ga0496105_0376422 3300048908 Bacteria 1130
213 Ga0496108_0343049 3300048911 Bacteria 1303
214 Ga0496109_0054016 3300048912 Bacteria 3666
215 Ga0496109_0276961 3300048912 Bacteria 1581
216 Ga0496110_0429607 3300048913 Bacteria 1204
217 Ga0496112_0034169 3300048915 Bacteria 4947
218 Ga0496113_0070010 3300048916 Bacteria 2665
219 Ga0496117_0099288 3300048920 Bacteria 1848
220 Ga0496121_0127311 3300048924 Bacteria 1912
221 Ga0496122_0132149 3300048925 Bacteria 1583
222 Ga0496123_0050396 3300048926 Bacteria 2782
223 Ga0496125_0047650 3300048928 Bacteria 3581
224 Ga0496126_0035030 3300048929 Bacteria 4708
225 nmdc:mga03683_158971_c1 3300050489 Bacteria 1023
226 nmdc:mga03683_97726_c1 3300050489 Bacteria 1287
227 nmdc:mga03n38_27900_c1 3300050490 Bacteria 2347
228 nmdc:mga0yw44_210800_c1 3300050492 Bacteria 1285
229 nmdc:mga0k408_117854_c1 3300050493 Bacteria 1572
230 nmdc:mga0k408_74384_c1 3300050493 Bacteria 1985
231 nmdc:mga06z11_29736_c1 3300050494 Bacteria 2635
232 nmdc:mga04h51_127814_c1 3300050495 Bacteria 953
233 nmdc:mga04h51_24740_c1 3300050495 Bacteria 1842
234 nmdc:mga04h51_9567_c1 3300050495 Bacteria 2634
235 nmdc:mga07m45_1411_c1 3300050496 Bacteria 11006
236 nmdc:mga07m45_290455_c1 3300050496 Bacteria 951
237 nmdc:mga07m45_6602_c1 3300050496 Bacteria 5879
238 nmdc:mga07m45_77448_c1 3300050496 Bacteria 1896
239 Ga0500610_0000889 3300053079 Bacteria 9620
240 Ga0500635_0000018 3300053080 Bacteria 112805
241 Ga0500651_0000420 3300053093 Bacteria 22746
242 Ga0500566_0175926 3300053094 Bacteria 1102
243 Ga0500571_001785 3300053110 Bacteria 10357
244 Ga0500595_066161 3300053119 Bacteria 1081
245 Ga0500626_017851 3300053128 Bacteria 3123
246 Ga0500655_001406 3300053133 Bacteria 4561
247 Ga0500658_0002278 3300053134 Bacteria 7426
248 Ga0500658_0002285 3300053134 Bacteria 7417
249 Ga0500559_0073766 3300053136 Bacteria 1540
250 Ga0500564_027164 3300053138 Bacteria 2633
251 Ga0500568_0001449 3300053139 Bacteria 15231
252 Ga0500568_0014623 3300053139 Bacteria 3538
253 Ga0500568_0045506 3300053139 Bacteria 1746
254 Ga0500590_002740 3300053148 Bacteria 7936
255 Ga0500604_0094951 3300053151 Bacteria 978
256 Ga0500616_0049167 3300053153 Bacteria 2232
257 Ga0500619_000257 3300053154 Bacteria 11294
258 Ga0500634_0027597 3300053161 Bacteria 3093
259 Ga0500638_150181 3300053162 Bacteria 1037
260 Ga0500636_0050866 3300053177 Bacteria 2436
261 Ga0500645_000061 3300053730 Bacteria 85703
262 Ga0500645_009029 3300053730 Bacteria 3367
263 Ga0500645_025685 3300053730 Bacteria 1796
264 Ga0500645_038796 3300053730 Bacteria 1412
265 Ga0500661_003659 3300055283 Bacteria 2887
266 2511245326 2511231002 Bacteria 5042903
267 2881104604 2881101125 Bacteria 4590519
268 2928086384 2928084124 Bacteria 7159212
269 2939634352 2939631187 Bacteria 6118131
270 Ga0451853_3050226
271 JGI25156J39149_1000266
272 JGI25154J39366_1000667
273 JGI25157J39369_1000026
274 JGI25159J45721_1004516
275 JGI25151J46595_10002989
276 JGI25151J46595_10006986
277 rootH2_10024744
278 rootL2_10140265
279 rootL2_10176132
280 rootH1_10008686
281 rootH1_10081789
282 rootH1_10095706
283 JGI25160J50197_1000188
284 JGI25161J50226_1000007
285 Ga0055539_1011091
286 Ga0055526_1002015
287 Ga0055526_1003935
288 Ga0055537_1000243
289 Ga0055524_1000213
290 Ga0055536_1000526
291 Ga0055534_1002616
292 Ga0055528_1000316
293 Ga0055530_10001521
294 Ga0055530_10003710
295 Ga0055540_1000176
296 Ga0055531_10000850
297 Ga0055531_10001384
298 Ga0055543_1000842
299 Ga0065165_1013300
300 Ga0065165_1018310
301 Ga0065165_1023985
302 Ga0070690_100355527
303 Ga0068869_100070058
304 Ga0070660_100248213
305 Ga0070660_100337731
306 Ga0070669_100071515
307 Ga0070675_100133166
308 Ga0070671_100063727
309 Ga0070659_100030625
310 Ga0070667_100088509
311 Ga0070667_100103185
312 Ga0070667_100254461
313 Ga0070714_100202631
314 Ga0070678_100077182
315 Ga0070662_100045789
316 Ga0070679_100026575
317 Ga0068853_100320904
318 Ga0070672_100031163
319 Ga0070665_100288339
320 Ga0068855_100023374
321 Ga0068855_100029345
322 Ga0068857_100004275
323 Ga0068854_100003679
324 Ga0068854_100013352
325 Ga0068856_100004474
326 Ga0068852_100085146
327 Ga0068859_100882425
328 Ga0068864_100092639
329 Ga0068863_100296513
330 Ga0075365_10010924
331 Ga0075365_10338943
332 Ga0075368_10011662
333 Ga0075368_10020773
334 Ga0075363_100116269
335 Ga0075362_10003388
336 Ga0075367_10013897
337 Ga0075367_10261893
338 Ga0075369_10009356
339 Ga0075369_10080749
340 Ga0075366_10061247
341 Ga0075366_10099303
342 Ga0075366_10137437
343 Ga0068865_100327480
344 Ga0097620_100882422
345 Ga0105244_10013573
346 Ga0105240_10000945
347 Ga0105240_10018521
348 Ga0105240_10086376
349 Ga0105241_10066951
350 Ga0105248_10004153
351 Ga0105237_10077787
352 Ga0105238_10042588
353 Ga0105239_10042880
354 Ga0105239_10211865
355 Ga0157369_10137886
356 Ga0157372_10084992
357 Ga0157380_10282301
358 Ga0163161_10385306
359 Ga0209258_100442
360 Ga0207425_1002808
361 Ga0209646_1000012
362 Ga0209026_1000004
363 Ga0209677_100079
364 Ga0209759_1000003
365 Ga0209565_1000026
366 Ga0209673_1000009
367 Ga0209130_1000289
368 Ga0209130_1001571
369 Ga0209675_1000473
370 Ga0209676_1000013
371 Ga0209676_1008088
372 Ga0209025_1000728
373 Ga0209025_1006033
374 Ga0209025_1012088
375 Ga0209564_1000579
376 Ga0209564_1000620
377 Ga0209564_1012266
378 Ga0209050_1000008
379 Ga0209050_1002038
380 Ga0209256_1000003
381 Ga0207426_1000091
382 Ga0207426_1004353
383 Ga0209051_1000005
384 Ga0209257_1000048
385 Ga0207695_10008295
386 Ga0207695_10025953
387 Ga0207695_10060988
388 Ga0207671_10036704
389 Ga0207660_10441674
390 Ga0207657_10029593
391 Ga0207652_10253712
392 Ga0207681_10011540
393 Ga0207694_10233537
394 Ga0207659_10128414
395 Ga0207664_10061356
396 Ga0207644_10055670
397 Ga0207706_10054954
398 Ga0207709_10050226
399 Ga0207704_10280710
400 Ga0207691_10070010
401 Ga0207711_10006876
402 Ga0207667_10002877
403 Ga0207667_10029595
404 Ga0207667_10252524
405 Ga0207668_10699340
406 Ga0207640_10110328
407 Ga0207640_10201072
408 Ga0207658_10103942
409 Ga0207658_10242785
410 Ga0207639_10249554
411 Ga0207702_10000033
412 Ga0207702_10000039
413 Ga0207702_10000058
414 Ga0207641_10340231
415 Ga0207641_10358869
416 Ga0207676_10235200
417 Ga0207674_10015667
418 Ga0207674_10024682
419 Ga0207674_10113642
420 Ga0207675_101097190
421 Ga0207683_10274137
422 Ga0207698_10124558
423 Ga0207698_10603318
424 Ga0265336_10000011
425 Ga0307515_10003726
426 Ga0265324_10000746
427 Ga0307512_10096620
428 Ga0265328_10004635
429 Ga0265328_10014855
430 Ga0265327_10000622
431 Ga0307513_10000653
432 Ga0307513_10108188
433 Ga0307408_100487921
434 Ga0307514_10001452
435 Ga0307514_10023711
436 Ga0307516_10003970
437 Ga0307405_10605366
438 Ga0307416_100235100
439 Ga0373925_0469558
440 Ga0395898_0023384
441 Ga0395905_0000117
442 Ga0395905_0009124
443 Ga0395905_0009898
444 Ga0395905_0047224
445 Ga0395901_0009538
446 Ga0436363_1662204
447 Ga0451804_0098915
448 Ga0451835_0203744
449 Ga0439449_0020686
450 Ga0450894_014138
451 Ga0450898_002577
452 Ga0450893_0029453
453 Ga0451577_0466520
454 Ga0466969_0000007
455 Ga0466966_0072811
456 Ga0466966_0290767
457 Ga0466961_0186893
458 Ga0466959_0067417
459 Ga0495638_0057311
460 Ga0495650_0040462
461 Ga0495610_0006682
462 Ga0495616_0001625
463 Ga0495620_0010354
464 Ga0495631_0000462
465 Ga0495637_0027168
466 Ga0495652_0470807
467 Ga0495654_0001949
468 Ga0495654_0013929
469 Ga0495621_0001511
470 Ga0495622_0108661
471 Ga0495588_0404586
472 Ga0495658_0059576
473 Ga0495670_0179251
474 Ga0495671_0004925
475 Ga0495660_0065027
476 Ga0495676_0007697
477 Ga0495593_0089831
478 Ga0495614_0012770
479 Ga0496102_0541329
480 Ga0496104_0068246
481 Ga0496105_0376422
482 Ga0496108_0343049
483 Ga0496109_0054016
484 Ga0496109_0276961
485 Ga0496110_0429607
486 Ga0496112_0034169
487 Ga0496113_0070010
488 Ga0496117_0099288
489 Ga0496121_0127311
490 Ga0496122_0132149
491 Ga0496123_0050396
492 Ga0496125_0047650
493 Ga0496126_0035030
494 nmdc:mga03683_158971_c1
495 nmdc:mga03683_97726_c1
496 nmdc:mga03n38_27900_c1
497 nmdc:mga0yw44_210800_c1
498 nmdc:mga0k408_117854_c1
499 nmdc:mga0k408_74384_c1
500 nmdc:mga06z11_29736_c1
501 nmdc:mga04h51_127814_c1
502 nmdc:mga04h51_24740_c1
503 nmdc:mga04h51_9567_c1
504 nmdc:mga07m45_1411_c1
505 nmdc:mga07m45_290455_c1
506 nmdc:mga07m45_6602_c1
507 nmdc:mga07m45_77448_c1
508 Ga0500610_0000889
509 Ga0500635_0000018
510 Ga0500651_0000420
511 Ga0500566_0175926
512 Ga0500571_001785
513 Ga0500595_066161
514 Ga0500626_017851
515 Ga0500655_001406
516 Ga0500658_0002278
517 Ga0500658_0002285
518 Ga0500559_0073766
519 Ga0500564_027164
520 Ga0500568_0001449
521 Ga0500568_0014623
522 Ga0500568_0045506
523 Ga0500590_002740
524 Ga0500604_0094951
525 Ga0500616_0049167
526 Ga0500619_000257
527 Ga0500634_0027597
528 Ga0500638_150181
529 Ga0500636_0050866
530 Ga0500645_000061
531 Ga0500645_009029
532 Ga0500645_025685
533 Ga0500645_038796
534 Ga0500661_003659
535 2511245326
536 2881104604
537 2928086384
538 2939634352

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01048

PNP_UDP_1

Phosphorylase superfamily

42

279

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6if8-assembly1.cif.gz_B aeromonas hydrophila mtan-2 complexed with adenine 0.9487 2 238
3bl6-assembly1.cif.gz_A-2 crystal structure of staphylococcus aureus 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase in complex with formycin a 0.9481 1 238
4qez-assembly1.cif.gz_A crystal structure of 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase from bacillus anthracis 0.9461 3 237
3mms-assembly1.cif.gz_A-2 crystal structure of streptococcus pneumoniae mta/sah nucleosidase in complex with 8-aminoadenine 0.945 2 237
3eei-assembly1.cif.gz_B crystal structure of 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase from neisseria meningitidis in complex with methylthio-immucillin-a 0.9442 1 238
ID Description Score Start End Superfamily
3mmsA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleoside phosphorylase domain 0.945 2 237 3.40.50.1580
3eeiB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleoside phosphorylase domain 0.9442 1 238 3.40.50.1580
3eeiB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleoside phosphorylase domain 0.9363 1 238 3.40.50.1580
3mmsA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleoside phosphorylase domain 0.9329 2 237 3.40.50.1580
4kn5B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleoside phosphorylase domain 0.9297 5 239 3.40.50.1580
ID Description Score Start End GO Terms
AF-A0A0Q4XNN8-F1-model_v4 adenosylhomocysteine nucleosidase (EC 3.2.2.9) 0.981 2 238 GO:0005829
GO:0008782
GO:0008930
GO:0009164
GO:0019284
GO:0019509
AF-A0A4Q3ME40-F1-model_v4 5'-methylthioadenosine/adenosylhomocysteine nucleosidase 0.9751 2 141 GO:0005829
GO:0008782
GO:0008930
GO:0009116
GO:0019284
AF-A0A0Q4XNN8-F1-model_v4 adenosylhomocysteine nucleosidase (EC 3.2.2.9) 0.9727 2 238 GO:0005829
GO:0008782
GO:0008930
GO:0009164
GO:0019284
GO:0019509
AF-A0A3D3SGM6-F1-model_v4 deleted 0.9709 4 83
AF-A0A542LW77-F1-model_v4 adenosylhomocysteine nucleosidase (EC 3.2.2.9) 0.9703 1 242 GO:0005829
GO:0008782
GO:0008930
GO:0009164
GO:0019284
GO:0019509

Map