F376458

General Info

Members Datasets Scaffolds Average Seq Length
269 161 538 336

Family's Representative Sequence

Representative Sequence 3300046663|Ga0495635_0088115|Ga0495635_0088115_56_1102
Length 348
Sequence MRNQVKQTAMKRIFFLLCLGCSLITARAQQKPHYTQYILNNYIINPALTGIENYTDIKVSHRHQWVGIQDAPVTTYITIHAPLGKKDFRTSATSYRVPGENPRGKSYWDDYTAAQPHHGIGLQIINDRTGPLNRFSAYGTYAYHIGISARTNIAAGFGAGFSNLSLAADKLDFGPANPVDPAVYNSKVLNTIVPDCNAGVWIYSADYFIGLAAQQIIPSKIDFSNGVLTTQEGKLVPHLFFTGGYRFLVGEDFNMIPSTMVKYVSSTLSTDFNIKIQYTDIAWTGFSYRVHDGFAAMIGMNISNAVNIGYSYDYTTSKLNTFTRGTHEIVVGFMIGNKYGDWCPRNVW

Samples

Sample ID Description Type Environment
1 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
68 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
69 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
105 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
106 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
107 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
108 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
115 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
116 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
117 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
118 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
129 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
130 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
136 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
137 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
138 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
139 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
140 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
141 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
146 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
149 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
150 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
151 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
152 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
153 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
154 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
155 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
156 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
157 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
158 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
159 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
160 2738541278 Niastella sp. CF465 Isolate Unclassified
161 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.51
Metatranscriptomes 0
Isolates 1.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.04
Nodule 0
Rhizoplane 0
Rhizosphere 77.32
Stem 0
Stem Tuber 0
Unclassified 14.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495635_0088115 3300046663 Bacteria 2124
2 JGI24751J29686_10000631 3300002459 Bacteria 9058
3 rootH1_10002935 3300003316 Bacteria 6973
4 rootH1_10070160 3300003316 Bacteria 4451
5 rootH2_10043213 3300003320 Bacteria 4773
6 rootH2_10075306 3300003320 Bacteria 2921
7 rootL2_10276975 3300003322 Bacteria 1460
8 rootH1_10000662 3300003323 Bacteria 213765
9 rootH1_10014881 3300003323 Bacteria 67322
10 rootH1_10017472 3300003323 Bacteria 25637
11 rootH1_10026982 3300003323 Bacteria 35823
12 rootH1_10211236 3300003323 Bacteria 4106
13 JGI25160J50197_1001825 3300003354 Bacteria 10265
14 Ga0070683_100006533 3300005329 Bacteria 9792
15 Ga0070670_100029135 3300005331 Bacteria 4751
16 Ga0068869_100025547 3300005334 Bacteria 4102
17 Ga0070666_10002327 3300005335 Bacteria 11480
18 Ga0068868_100171013 3300005338 Bacteria 1799
19 Ga0070689_100345500 3300005340 Bacteria 1247
20 Ga0070687_100090607 3300005343 Bacteria 1690
21 Ga0070661_100227687 3300005344 Bacteria 1432
22 Ga0070671_100044339 3300005355 Bacteria 3696
23 Ga0070671_100267759 3300005355 Unclassified 1452
24 Ga0070674_100061699 3300005356 Bacteria 2617
25 Ga0070674_100240825 3300005356 Unclassified 1416
26 Ga0070673_100401620 3300005364 Bacteria 1226
27 Ga0070667_100015388 3300005367 Bacteria 6324
28 Ga0070667_100022258 3300005367 Bacteria 5259
29 Ga0070678_100097290 3300005456 Bacteria 2272
30 Ga0070698_100071230 3300005471 Bacteria 3487
31 Ga0070698_100346070 3300005471 Unclassified 1418
32 Ga0070699_100162636 3300005518 Unclassified 1976
33 Ga0070684_100005487 3300005535 Bacteria 9719
34 Ga0070697_100376385 3300005536 Bacteria 1229
35 Ga0070672_100024126 3300005543 Bacteria 4489
36 Ga0070672_100138955 3300005543 Bacteria 2002
37 Ga0070686_100237375 3300005544 Bacteria 1326
38 Ga0070665_100000009 3300005548 Bacteria 562640
39 Ga0070665_100244922 3300005548 Bacteria 1793
40 Ga0068855_100382784 3300005563 Bacteria 1544
41 Ga0068855_100470604 3300005563 Bacteria 1369
42 Ga0070664_100020116 3300005564 Bacteria 5495
43 Ga0068857_100032256 3300005577 Bacteria 4632
44 Ga0068857_100039870 3300005577 Bacteria 4163
45 Ga0068857_100055712 3300005577 Unclassified 3508
46 Ga0068857_100087453 3300005577 Bacteria 2787
47 Ga0068854_100095998 3300005578 Bacteria 2214
48 Ga0068856_100168127 3300005614 Bacteria 2204
49 Ga0068856_100303270 3300005614 Bacteria 1615
50 Ga0068852_100007688 3300005616 Bacteria 7881
51 Ga0068852_100008132 3300005616 Bacteria 7701
52 Ga0068852_100356187 3300005616 Bacteria 1430
53 Ga0068859_100000066 3300005617 Bacteria 100640
54 Ga0068859_100007775 3300005617 Bacteria 10885
55 Ga0068859_100027110 3300005617 Bacteria 5748
56 Ga0068864_100018016 3300005618 Bacteria 5893
57 Ga0068851_10092588 3300005834 Bacteria 1593
58 Ga0068851_10101107 3300005834 Bacteria 1530
59 Ga0068863_100045184 3300005841 Bacteria 4180
60 Ga0068863_100145167 3300005841 Bacteria 2269
61 Ga0068863_100262091 3300005841 Bacteria 1671
62 Ga0068858_100033638 3300005842 Unclassified 4755
63 Ga0068860_100000033 3300005843 Bacteria 245461
64 Ga0068860_100004407 3300005843 Bacteria 14381
65 Ga0068860_100036909 3300005843 Bacteria 4679
66 Ga0068860_100543588 3300005843 Unclassified 1163
67 Ga0081539_10124460 3300005985 Bacteria 1275
68 Ga0068871_100034907 3300006358 Unclassified 3994
69 Ga0075429_100222973 3300006880 Bacteria 1651
70 Ga0097620_100000066 3300006931 Bacteria 100640
71 Ga0097620_100007776 3300006931 Bacteria 10885
72 Ga0097620_100027110 3300006931 Bacteria 5748
73 Ga0105240_10027402 3300009093 Bacteria 7458
74 Ga0105240_10044790 3300009093 Bacteria 5618
75 Ga0105240_10125047 3300009093 Bacteria 3092
76 Ga0105240_10135326 3300009093 Bacteria 2951
77 Ga0111539_10140855 3300009094 Bacteria 2823
78 Ga0105247_10004921 3300009101 Bacteria 8496
79 Ga0114129_10010212 3300009147 Bacteria 13386
80 Ga0114129_10030870 3300009147 Bacteria 7579
81 Ga0105241_10024882 3300009174 Unclassified 4448
82 Ga0105237_10003163 3300009545 Bacteria 19782
83 Ga0105237_10009397 3300009545 Bacteria 10471
84 Ga0105237_10022688 3300009545 Bacteria 6440
85 Ga0105237_10030545 3300009545 Bacteria 5471
86 Ga0105238_10211769 3300009551 Unclassified 1914
87 Ga0105249_10008749 3300009553 Bacteria 8833
88 Ga0105249_10019738 3300009553 Bacteria 6018
89 Ga0105239_10001450 3300010375 Bacteria 31601
90 Ga0105239_10001680 3300010375 Bacteria 29168
91 Ga0105239_10008698 3300010375 Bacteria 11493
92 Ga0105239_10044996 3300010375 Bacteria 4838
93 Ga0105239_10121681 3300010375 Bacteria 2899
94 Ga0157373_10005818 3300013100 Bacteria 9229
95 Ga0157371_10019502 3300013102 Bacteria 5000
96 Ga0157371_10037572 3300013102 Bacteria 3465
97 Ga0157370_10009073 3300013104 Bacteria 10666
98 Ga0157369_10005998 3300013105 Bacteria 14118
99 Ga0157369_10034103 3300013105 Bacteria 5588
100 Ga0157369_10105009 3300013105 Unclassified 3007
101 Ga0157374_10154771 3300013296 Bacteria 2231
102 Ga0157374_10279741 3300013296 Bacteria 1647
103 Ga0157374_10387670 3300013296 Unclassified 1392
104 Ga0157378_10008467 3300013297 Bacteria 8960
105 Ga0157378_10015270 3300013297 Bacteria 6725
106 Ga0157378_10053606 3300013297 Bacteria 3591
107 Ga0163162_10002903 3300013306 Bacteria 16325
108 Ga0157372_10001355 3300013307 Bacteria 26492
109 Ga0157372_10026266 3300013307 Bacteria 6335
110 Ga0157372_10033444 3300013307 Bacteria 5648
111 Ga0157372_10539344 3300013307 Bacteria 1360
112 Ga0157375_10109288 3300013308 Bacteria 2861
113 Ga0157375_10314442 3300013308 Viruses 1730
114 Ga0163163_10029124 3300014325 Bacteria 5310
115 Ga0163163_10128837 3300014325 Bacteria 2570
116 Ga0163163_10261679 3300014325 Unclassified 1781
117 Ga0163163_10558281 3300014325 Unclassified 1208
118 Ga0157380_10265130 3300014326 Bacteria 1562
119 Ga0157377_10010802 3300014745 Bacteria 4532
120 Ga0157377_10076979 3300014745 Bacteria 1941
121 Ga0157379_10049786 3300014968 Unclassified 3741
122 Ga0157376_10193762 3300014969 Bacteria 1865
123 Ga0213876_10002226 3300021384 Archaea 11438
124 Ga0209646_1002022 3300025246 Bacteria 4837
125 Ga0209646_1003063 3300025246 Bacteria 3411
126 Ga0207426_1000019 3300025302 Bacteria 558579
127 Ga0207656_10005596 3300025321 Bacteria 4455
128 Ga0207710_10027926 3300025900 Unclassified 2447
129 Ga0207688_10108184 3300025901 Bacteria 1612
130 Ga0207680_10000143 3300025903 Bacteria 34125
131 Ga0207654_10013553 3300025911 Unclassified 4195
132 Ga0207654_10086386 3300025911 Bacteria 1901
133 Ga0207695_10061800 3300025913 Bacteria 3870
134 Ga0207695_10130522 3300025913 Unclassified 2471
135 Ga0207695_10306456 3300025913 Bacteria 1479
136 Ga0207671_10014297 3300025914 Bacteria 6279
137 Ga0207671_10023619 3300025914 Bacteria 4635
138 Ga0207671_10257484 3300025914 Bacteria 1373
139 Ga0207662_10023957 3300025918 Bacteria 3511
140 Ga0207657_10050484 3300025919 Bacteria 3621
141 Ga0207649_10144647 3300025920 Bacteria 1631
142 Ga0207694_10037362 3300025924 Bacteria 3730
143 Ga0207694_10091482 3300025924 Bacteria 2401
144 Ga0207650_10257931 3300025925 Unclassified 1413
145 Ga0207644_10185830 3300025931 Unclassified 1632
146 Ga0207669_10079897 3300025937 Unclassified 2090
147 Ga0207704_10251778 3300025938 Bacteria 1326
148 Ga0207691_10081290 3300025940 Bacteria 2913
149 Ga0207689_10011306 3300025942 Bacteria 7660
150 Ga0207661_10146071 3300025944 Bacteria 2040
151 Ga0207679_10005774 3300025945 Bacteria 7769
152 Ga0207667_10000610 3300025949 Bacteria 46234
153 Ga0207712_10014722 3300025961 Bacteria 5036
154 Ga0207658_10019248 3300025986 Unclassified 4720
155 Ga0207677_10093888 3300026023 Bacteria 2189
156 Ga0207703_10098782 3300026035 Unclassified 2469
157 Ga0207641_10006292 3300026088 Bacteria 10040
158 Ga0207641_10006787 3300026088 Bacteria 9592
159 Ga0207641_10070301 3300026088 Bacteria 3008
160 Ga0207674_10009385 3300026116 Bacteria 11187
161 Ga0207674_10295904 3300026116 Unclassified 1567
162 Ga0207675_100224674 3300026118 Bacteria 1810
163 Ga0207675_100461379 3300026118 Bacteria 1260
164 Ga0207683_10129147 3300026121 Bacteria 2272
165 Ga0207698_10003300 3300026142 Bacteria 9700
166 Ga0207698_10026580 3300026142 Bacteria 4095
167 Ga0268266_10000014 3300028379 Bacteria 644033
168 Ga0268266_10322033 3300028379 Bacteria 1447
169 Ga0268265_10293809 3300028380 Bacteria 1460
170 Ga0268264_10000013 3300028381 Bacteria 513859
171 Ga0268264_10001339 3300028381 Bacteria 23170
172 Ga0268264_10002568 3300028381 Bacteria 15916
173 Ga0268264_10018521 3300028381 Bacteria 5695
174 Ga0307517_10201326 3300028786 Unclassified 1244
175 Ga0307515_10000002 3300028794 Bacteria 1231751
176 Ga0307515_10000251 3300028794 Bacteria 132970
177 Ga0307512_10139457 3300030522 Unclassified 1489
178 Ga0307513_10095285 3300031456 Bacteria 3018
179 Ga0307513_10154937 3300031456 Bacteria 2193
180 Ga0307513_10225219 3300031456 Bacteria 1692
181 Ga0307509_10027725 3300031507 Bacteria 6300
182 Ga0307509_10039762 3300031507 Bacteria 5121
183 Ga0307509_10044720 3300031507 Unclassified 4782
184 Ga0307509_10080678 3300031507 Bacteria 3364
185 Ga0307509_10122051 3300031507 Unclassified 2581
186 Ga0307508_10001604 3300031616 Bacteria 25228
187 Ga0307508_10002685 3300031616 Bacteria 18623
188 Ga0307410_10080977 3300031852 Unclassified 2280
189 Ga0307406_10022518 3300031901 Bacteria 3739
190 Ga0307409_100445388 3300031995 Bacteria 1249
191 Ga0373945_0084455 3300035116 Bacteria 1221
192 Ga0395905_0131273 3300037471 Bacteria 2356
193 Ga0436365_0078862 3300039437 Bacteria 16251
194 Ga0439436_0026013 3300041404 Bacteria 1717
195 Ga0439439_0036819 3300041406 Bacteria 1260
196 Ga0451853_0090482 3300041512 Bacteria 2115
197 Ga0451853_0259666 3300041512 Bacteria 4239
198 Ga0439457_001229 3300042014 Bacteria 7709
199 Ga0439457_008198 3300042014 Bacteria 2471
200 Ga0439462_0025364 3300042015 Bacteria 1560
201 Ga0451577_0009003 3300042876 Bacteria 9646
202 Ga0466969_0000399 3300044656 Bacteria 23843
203 Ga0466969_0000427 3300044656 Bacteria 23025
204 Ga0466972_0000007 3300044658 Bacteria 277010
205 Ga0466972_0000022 3300044658 Bacteria 193802
206 Ga0466972_0000101 3300044658 Bacteria 75550
207 Ga0466972_0009925 3300044658 Bacteria 4779
208 Ga0466972_0029690 3300044658 Bacteria 2692
209 Ga0453684_0585231 3300044712 Bacteria 1225
210 Ga0466970_0005518 3300044765 Bacteria 6281
211 Ga0466957_0000085 3300044842 Bacteria 37682
212 Ga0466957_0009109 3300044842 Bacteria 5660
213 Ga0466957_0010213 3300044842 Bacteria 5378
214 Ga0466957_0018062 3300044842 Bacteria 4138
215 Ga0466959_0000011 3300045049 Bacteria 173387
216 Ga0466959_0000053 3300045049 Bacteria 81055
217 Ga0495638_0074485 3300046460 Unclassified 2071
218 Ga0495638_0075249 3300046460 Bacteria 2058
219 Ga0495648_0002439 3300046524 Bacteria 17207
220 Ga0495625_0108770 3300046660 Bacteria 1897
221 Ga0495687_000106 3300047443 Bacteria 128130
222 Ga0501290_014185 3300049513 Unclassified 1046
223 Ga0501033_0016689 3300049570 Bacteria 5554
224 Ga0501034_0011163 3300049571 Bacteria 9323
225 Ga0501034_0061141 3300049571 Unclassified 3783
226 Ga0501043_0163977 3300049579 Bacteria 1736
227 Ga0501047_0008196 3300049581 Bacteria 9873
228 Ga0501047_0064289 3300049581 Bacteria 3539
229 Ga0501047_0191382 3300049581 Bacteria 1909
230 Ga0501202_002481 3300049652 Unclassified 3096
231 Ga0501217_007230 3300049661 Unclassified 2375
232 Ga0501223_006845 3300049663 Unclassified 2343
233 Ga0501252_001978 3300049682 Bacteria 1982
234 Ga0501225_0000267 3300049705 Bacteria 16469
235 Ga0501241_033644 3300049758 Bacteria 975
236 Ga0501266_005680 3300049763 Unclassified 1550
237 Ga0501044_0094812 3300049823 Bacteria 3008
238 Ga0501044_0173061 3300049823 Unclassified 2129
239 nmdc:mga0k408_87327_c1 3300050493 Bacteria 1831
240 nmdc:mga05p37_23467_c1 3300050507 Bacteria 7485
241 nmdc:mga05p37_6859_c1 3300050507 Bacteria 13426
242 Ga0500578_0000018 3300053086 Bacteria 172537
243 Ga0500578_0025459 3300053086 Bacteria 3796
244 Ga0500646_0028629 3300053090 Unclassified 1522
245 Ga0500583_0000005 3300053092 Bacteria 166480
246 Ga0500583_0000334 3300053092 Bacteria 15648
247 Ga0500583_0006259 3300053092 Bacteria 4078
248 Ga0500583_0088206 3300053092 Unclassified 1507
249 Ga0500555_020177 3300053103 Bacteria 1920
250 Ga0500562_000078 3300053108 Bacteria 44915
251 Ga0500594_0023812 3300053118 Bacteria 1556
252 Ga0500594_0029085 3300053118 Bacteria 1443
253 Ga0500652_033015 3300053131 Bacteria 2043
254 Ga0500652_035445 3300053131 Bacteria 1982
255 Ga0500658_0121552 3300053134 Bacteria 1158
256 Ga0500559_0028653 3300053136 Bacteria 2380
257 Ga0500568_0000142 3300053139 Bacteria 64049
258 Ga0500568_0004451 3300053139 Bacteria 7483
259 Ga0500573_0078074 3300053140 Bacteria 1884
260 Ga0500604_0001230 3300053151 Bacteria 7146
261 Ga0500616_0019431 3300053153 Bacteria 3830
262 Ga0500622_0005569 3300053156 Bacteria 7521
263 Ga0500622_0013019 3300053156 Bacteria 4495
264 Ga0500622_0047363 3300053156 Unclassified 2220
265 Ga0500645_044439 3300053730 Bacteria 1306
266 2738724174 2738541278 Bacteria 9755573
267 2738726967 2738541278 Bacteria 9755573
268 2738729582 2738541278 Bacteria 9755573
269 2929156476 2929154850 Bacteria 6753285
270 Ga0495635_0088115
271 JGI24751J29686_10000631
272 rootH1_10002935
273 rootH1_10070160
274 rootH2_10043213
275 rootH2_10075306
276 rootL2_10276975
277 rootH1_10000662
278 rootH1_10014881
279 rootH1_10017472
280 rootH1_10026982
281 rootH1_10211236
282 JGI25160J50197_1001825
283 Ga0070683_100006533
284 Ga0070670_100029135
285 Ga0068869_100025547
286 Ga0070666_10002327
287 Ga0068868_100171013
288 Ga0070689_100345500
289 Ga0070687_100090607
290 Ga0070661_100227687
291 Ga0070671_100044339
292 Ga0070671_100267759
293 Ga0070674_100061699
294 Ga0070674_100240825
295 Ga0070673_100401620
296 Ga0070667_100015388
297 Ga0070667_100022258
298 Ga0070678_100097290
299 Ga0070698_100071230
300 Ga0070698_100346070
301 Ga0070699_100162636
302 Ga0070684_100005487
303 Ga0070697_100376385
304 Ga0070672_100024126
305 Ga0070672_100138955
306 Ga0070686_100237375
307 Ga0070665_100000009
308 Ga0070665_100244922
309 Ga0068855_100382784
310 Ga0068855_100470604
311 Ga0070664_100020116
312 Ga0068857_100032256
313 Ga0068857_100039870
314 Ga0068857_100055712
315 Ga0068857_100087453
316 Ga0068854_100095998
317 Ga0068856_100168127
318 Ga0068856_100303270
319 Ga0068852_100007688
320 Ga0068852_100008132
321 Ga0068852_100356187
322 Ga0068859_100000066
323 Ga0068859_100007775
324 Ga0068859_100027110
325 Ga0068864_100018016
326 Ga0068851_10092588
327 Ga0068851_10101107
328 Ga0068863_100045184
329 Ga0068863_100145167
330 Ga0068863_100262091
331 Ga0068858_100033638
332 Ga0068860_100000033
333 Ga0068860_100004407
334 Ga0068860_100036909
335 Ga0068860_100543588
336 Ga0081539_10124460
337 Ga0068871_100034907
338 Ga0075429_100222973
339 Ga0097620_100000066
340 Ga0097620_100007776
341 Ga0097620_100027110
342 Ga0105240_10027402
343 Ga0105240_10044790
344 Ga0105240_10125047
345 Ga0105240_10135326
346 Ga0111539_10140855
347 Ga0105247_10004921
348 Ga0114129_10010212
349 Ga0114129_10030870
350 Ga0105241_10024882
351 Ga0105237_10003163
352 Ga0105237_10009397
353 Ga0105237_10022688
354 Ga0105237_10030545
355 Ga0105238_10211769
356 Ga0105249_10008749
357 Ga0105249_10019738
358 Ga0105239_10001450
359 Ga0105239_10001680
360 Ga0105239_10008698
361 Ga0105239_10044996
362 Ga0105239_10121681
363 Ga0157373_10005818
364 Ga0157371_10019502
365 Ga0157371_10037572
366 Ga0157370_10009073
367 Ga0157369_10005998
368 Ga0157369_10034103
369 Ga0157369_10105009
370 Ga0157374_10154771
371 Ga0157374_10279741
372 Ga0157374_10387670
373 Ga0157378_10008467
374 Ga0157378_10015270
375 Ga0157378_10053606
376 Ga0163162_10002903
377 Ga0157372_10001355
378 Ga0157372_10026266
379 Ga0157372_10033444
380 Ga0157372_10539344
381 Ga0157375_10109288
382 Ga0157375_10314442
383 Ga0163163_10029124
384 Ga0163163_10128837
385 Ga0163163_10261679
386 Ga0163163_10558281
387 Ga0157380_10265130
388 Ga0157377_10010802
389 Ga0157377_10076979
390 Ga0157379_10049786
391 Ga0157376_10193762
392 Ga0213876_10002226
393 Ga0209646_1002022
394 Ga0209646_1003063
395 Ga0207426_1000019
396 Ga0207656_10005596
397 Ga0207710_10027926
398 Ga0207688_10108184
399 Ga0207680_10000143
400 Ga0207654_10013553
401 Ga0207654_10086386
402 Ga0207695_10061800
403 Ga0207695_10130522
404 Ga0207695_10306456
405 Ga0207671_10014297
406 Ga0207671_10023619
407 Ga0207671_10257484
408 Ga0207662_10023957
409 Ga0207657_10050484
410 Ga0207649_10144647
411 Ga0207694_10037362
412 Ga0207694_10091482
413 Ga0207650_10257931
414 Ga0207644_10185830
415 Ga0207669_10079897
416 Ga0207704_10251778
417 Ga0207691_10081290
418 Ga0207689_10011306
419 Ga0207661_10146071
420 Ga0207679_10005774
421 Ga0207667_10000610
422 Ga0207712_10014722
423 Ga0207658_10019248
424 Ga0207677_10093888
425 Ga0207703_10098782
426 Ga0207641_10006292
427 Ga0207641_10006787
428 Ga0207641_10070301
429 Ga0207674_10009385
430 Ga0207674_10295904
431 Ga0207675_100224674
432 Ga0207675_100461379
433 Ga0207683_10129147
434 Ga0207698_10003300
435 Ga0207698_10026580
436 Ga0268266_10000014
437 Ga0268266_10322033
438 Ga0268265_10293809
439 Ga0268264_10000013
440 Ga0268264_10001339
441 Ga0268264_10002568
442 Ga0268264_10018521
443 Ga0307517_10201326
444 Ga0307515_10000002
445 Ga0307515_10000251
446 Ga0307512_10139457
447 Ga0307513_10095285
448 Ga0307513_10154937
449 Ga0307513_10225219
450 Ga0307509_10027725
451 Ga0307509_10039762
452 Ga0307509_10044720
453 Ga0307509_10080678
454 Ga0307509_10122051
455 Ga0307508_10001604
456 Ga0307508_10002685
457 Ga0307410_10080977
458 Ga0307406_10022518
459 Ga0307409_100445388
460 Ga0373945_0084455
461 Ga0395905_0131273
462 Ga0436365_0078862
463 Ga0439436_0026013
464 Ga0439439_0036819
465 Ga0451853_0090482
466 Ga0451853_0259666
467 Ga0439457_001229
468 Ga0439457_008198
469 Ga0439462_0025364
470 Ga0451577_0009003
471 Ga0466969_0000399
472 Ga0466969_0000427
473 Ga0466972_0000007
474 Ga0466972_0000022
475 Ga0466972_0000101
476 Ga0466972_0009925
477 Ga0466972_0029690
478 Ga0453684_0585231
479 Ga0466970_0005518
480 Ga0466957_0000085
481 Ga0466957_0009109
482 Ga0466957_0010213
483 Ga0466957_0018062
484 Ga0466959_0000011
485 Ga0466959_0000053
486 Ga0495638_0074485
487 Ga0495638_0075249
488 Ga0495648_0002439
489 Ga0495625_0108770
490 Ga0495687_000106
491 Ga0501290_014185
492 Ga0501033_0016689
493 Ga0501034_0011163
494 Ga0501034_0061141
495 Ga0501043_0163977
496 Ga0501047_0008196
497 Ga0501047_0064289
498 Ga0501047_0191382
499 Ga0501202_002481
500 Ga0501217_007230
501 Ga0501223_006845
502 Ga0501252_001978
503 Ga0501225_0000267
504 Ga0501241_033644
505 Ga0501266_005680
506 Ga0501044_0094812
507 Ga0501044_0173061
508 nmdc:mga0k408_87327_c1
509 nmdc:mga05p37_23467_c1
510 nmdc:mga05p37_6859_c1
511 Ga0500578_0000018
512 Ga0500578_0025459
513 Ga0500646_0028629
514 Ga0500583_0000005
515 Ga0500583_0000334
516 Ga0500583_0006259
517 Ga0500583_0088206
518 Ga0500555_020177
519 Ga0500562_000078
520 Ga0500594_0023812
521 Ga0500594_0029085
522 Ga0500652_033015
523 Ga0500652_035445
524 Ga0500658_0121552
525 Ga0500559_0028653
526 Ga0500568_0000142
527 Ga0500568_0004451
528 Ga0500573_0078074
529 Ga0500604_0001230
530 Ga0500616_0019431
531 Ga0500622_0005569
532 Ga0500622_0013019
533 Ga0500622_0047363
534 Ga0500645_044439
535 2738724174
536 2738726967
537 2738729582
538 2929156476

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11751

PorP_SprF

Type IX secretion system membrane protein PorP/SprF

26

333

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6gie-assembly1.cif.gz_A crystal structure of the acinetobacter baumannii outer membrane protein omp33 0.6089 43 324
6gie-assembly1.cif.gz_A crystal structure of the acinetobacter baumannii outer membrane protein omp33 0.6019 43 324
2f1c-assembly1.cif.gz_X crystal structure of the monomeric porin ompg 0.5573 61 324
2iwv-assembly2.cif.gz_B structure of the monomeric outer membrane porin ompg in the open and closed conformation 0.5432 62 323
2x9k-assembly1.cif.gz_A structure of a e.coli porin 0.536 60 323
ID Description Score Start End Superfamily
af_Q9M2W6_94_225_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.7399 187 324 2.40.160.10
af_Q9FHQ9_1_163_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.6597 123 324 2.40.160.10
af_Q9M2W6_94_225_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.658 187 324 2.40.160.10
af_Q9FHQ9_1_163_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.632 123 324 2.40.160.10
af_K7MKU5_2_244_2.40.160.10 Mainly Beta;Beta Barrel;Porin;Porin 0.5822 45 324 2.40.160.10
ID Description Score Start End GO Terms
AF-A0A1H9ED92-F1-model_v4 Type IX secretion system membrane protein, PorP/SprF family 0.902 228 334
AF-A0A4R7FCZ9-F1-model_v4 Type IX secretion system PorP/SprF family membrane protein 0.8999 240 329
AF-A0A3C0K347-F1-model_v4 Type IX secretion system membrane protein PorP/SprF 0.8778 234 333
AF-A0A521A6C3-F1-model_v4 Type IX secretion system membrane protein PorP/SprF 0.8764 228 334
AF-A0A3M1YE09-F1-model_v4 Type IX secretion system membrane protein PorP/SprF 0.8763 228 334

Map