F376500
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 269 | 146 | 538 | 352 |
Family's Representative Sequence
| Representative Sequence | 3300049571|Ga0501034_0021174|Ga0501034_0021174_2275_3360 |
| Length | 361 |
| Sequence | VERYSRQIILPQIGTSGQQKLLAAKVLVVGAGGLGCPVLQYLSTAGIGTIGIADSDKVSAINLNRQVLYDENDIGRDKTHVCQEKLSKLNSGSVIHTYSSVNTNNALEIIRQYDVIVDCTDNFSTRYLLNDACIICNRPLVHASIYRFDASLSVFNYTNKYGERGATYRCLFPFPPKLDEIESCSEAGVLGTLTGIIGCMQANEVLKIIGEFGEVLSGKLLMFDGLTGQSRIMKVKLNHENLNITSLAENYDFTAPNIKEITASALHQKLHDKEDIQLVDVRTVEEYANFHLNSSFIPINILEKNIHLISRDKPVIFYCETGSRSASAIKILQEQYHFDNLYNLQGGLREWKTTIAHHNLS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 2 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 3 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 4 | 3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Metagenome | Rhizosphere |
| 5 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 6 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 7 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 8 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 9 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 10 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 11 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 12 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 13 | 3300004799 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 14 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 15 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 20 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 27 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 28 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 29 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 30 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 31 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 32 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 34 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 35 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 36 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 37 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 38 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 39 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 40 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 42 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 43 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 61 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 65 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 67 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 70 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 71 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 99 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 100 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 101 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 102 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 103 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 104 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 105 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 106 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 107 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 108 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 133 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 137 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 138 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 139 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 140 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 141 | 2839989709 | Pontibacter arcticus 2b14 | Isolate | Unclassified |
| 142 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 143 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 144 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 145 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 146 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.03 |
| Metatranscriptomes | 0.37 |
| Isolates | 2.6 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 6.32 |
| Nodule | 0 |
| Rhizoplane | 0.37 |
| Rhizosphere | 86.25 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 9.29 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501034_0021174 | 3300049571 | Bacteria | 6632 |
| 2 | JGI24737J22298_10003849 | 3300001990 | Bacteria | 5277 |
| 3 | JGI24735J21928_10000004 | 3300002067 | Bacteria | 381713 |
| 4 | JGI24744J21845_10002604 | 3300002077 | Bacteria | 3685 |
| 5 | JGI25162J39368_1000017 | 3300002737 | Bacteria | 281385 |
| 6 | JGI25162J39368_1002129 | 3300002737 | Bacteria | 8382 |
| 7 | JGI25164J39214_1002241 | 3300002772 | Bacteria | 3152 |
| 8 | JGI25406J46586_10028843 | 3300003203 | Unclassified | 2109 |
| 9 | JGI25165J46597_1001445 | 3300003214 | Bacteria | 12601 |
| 10 | rootH1_10005314 | 3300003316 | Bacteria | 25578 |
| 11 | rootH2_10001101 | 3300003320 | Bacteria | 45863 |
| 12 | rootH2_10043765 | 3300003320 | Bacteria | 15088 |
| 13 | rootH2_10108973 | 3300003320 | Unclassified | 2895 |
| 14 | rootH2_10227775 | 3300003320 | Bacteria | 1681 |
| 15 | rootL2_10196466 | 3300003322 | Bacteria | 1808 |
| 16 | rootH1_10009528 | 3300003323 | Bacteria | 31356 |
| 17 | rootH1_10231212 | 3300003323 | Bacteria | 2827 |
| 18 | rootH1_10333112 | 3300003323 | Unclassified | 1537 |
| 19 | Ga0058863_11903483 | 3300004799 | Bacteria | 5348 |
| 20 | Ga0065714_10006471 | 3300005288 | Bacteria | 5544 |
| 21 | Ga0065714_10069713 | 3300005288 | Bacteria | 4113 |
| 22 | Ga0070658_10000011 | 3300005327 | Bacteria | 294396 |
| 23 | Ga0070658_10059121 | 3300005327 | Bacteria | 3121 |
| 24 | Ga0070676_10000471 | 3300005328 | Bacteria | 19324 |
| 25 | Ga0070676_10143540 | 3300005328 | Bacteria | 1522 |
| 26 | Ga0070683_100035691 | 3300005329 | Bacteria | 4545 |
| 27 | Ga0070680_100234385 | 3300005336 | Bacteria | 1550 |
| 28 | Ga0068868_100062318 | 3300005338 | Bacteria | 2956 |
| 29 | Ga0070660_100014306 | 3300005339 | Bacteria | 5714 |
| 30 | Ga0070660_100096155 | 3300005339 | Bacteria | 2342 |
| 31 | Ga0070660_100177924 | 3300005339 | Bacteria | 1721 |
| 32 | Ga0070661_100113716 | 3300005344 | Bacteria | 2023 |
| 33 | Ga0070671_100029755 | 3300005355 | Bacteria | 4505 |
| 34 | Ga0070673_100006304 | 3300005364 | Bacteria | 7702 |
| 35 | Ga0070659_100004095 | 3300005366 | Bacteria | 10394 |
| 36 | Ga0070659_100038481 | 3300005366 | Unclassified | 3730 |
| 37 | Ga0070678_100002096 | 3300005456 | Bacteria | 10811 |
| 38 | Ga0070681_10065269 | 3300005458 | Bacteria | 3609 |
| 39 | Ga0070681_10174393 | 3300005458 | Unclassified | 2072 |
| 40 | Ga0068867_100003012 | 3300005459 | Bacteria | 11876 |
| 41 | Ga0068867_100108081 | 3300005459 | Bacteria | 2133 |
| 42 | Ga0070685_10073980 | 3300005466 | Bacteria | 2026 |
| 43 | Ga0070679_100032826 | 3300005530 | Bacteria | 5138 |
| 44 | Ga0070679_100137272 | 3300005530 | Unclassified | 2426 |
| 45 | Ga0070679_100195862 | 3300005530 | Bacteria | 1988 |
| 46 | Ga0070684_100262357 | 3300005535 | Bacteria | 1580 |
| 47 | Ga0068853_100012181 | 3300005539 | Bacteria | 6994 |
| 48 | Ga0068853_100049786 | 3300005539 | Bacteria | 3602 |
| 49 | Ga0068853_100064210 | 3300005539 | Bacteria | 3182 |
| 50 | Ga0068853_100091167 | 3300005539 | Bacteria | 2680 |
| 51 | Ga0068853_100295482 | 3300005539 | Bacteria | 1496 |
| 52 | Ga0070665_100000003 | 3300005548 | Bacteria | 811857 |
| 53 | Ga0070665_100006942 | 3300005548 | Bacteria | 11513 |
| 54 | Ga0068855_100000070 | 3300005563 | Bacteria | 123584 |
| 55 | Ga0068855_100000388 | 3300005563 | Bacteria | 54070 |
| 56 | Ga0068855_100010991 | 3300005563 | Bacteria | 10924 |
| 57 | Ga0068855_100071180 | 3300005563 | Bacteria | 4045 |
| 58 | Ga0068855_100258920 | 3300005563 | Unclassified | 1939 |
| 59 | Ga0068857_100037446 | 3300005577 | Bacteria | 4297 |
| 60 | Ga0068854_100022715 | 3300005578 | Bacteria | 4279 |
| 61 | Ga0068854_100156387 | 3300005578 | Bacteria | 1762 |
| 62 | Ga0068856_100002273 | 3300005614 | Bacteria | 19820 |
| 63 | Ga0068856_100005531 | 3300005614 | Bacteria | 12443 |
| 64 | Ga0068856_100083807 | 3300005614 | Bacteria | 3166 |
| 65 | Ga0068852_100006806 | 3300005616 | Bacteria | 8299 |
| 66 | Ga0068852_100063874 | 3300005616 | Bacteria | 3207 |
| 67 | Ga0068852_100128587 | 3300005616 | Bacteria | 2330 |
| 68 | Ga0068858_100280607 | 3300005842 | Unclassified | 1586 |
| 69 | Ga0075366_10002253 | 3300006195 | Bacteria | 9856 |
| 70 | Ga0075366_10029400 | 3300006195 | Bacteria | 3228 |
| 71 | Ga0097621_100000020 | 3300006237 | Bacteria | 86226 |
| 72 | Ga0097621_100042441 | 3300006237 | Bacteria | 3664 |
| 73 | Ga0068871_100000130 | 3300006358 | Bacteria | 47875 |
| 74 | Ga0068865_100000050 | 3300006881 | Bacteria | 65632 |
| 75 | Ga0105240_10000728 | 3300009093 | Bacteria | 60140 |
| 76 | Ga0105240_10010235 | 3300009093 | Bacteria | 13201 |
| 77 | Ga0105240_10017595 | 3300009093 | Bacteria | 9629 |
| 78 | Ga0105240_10051410 | 3300009093 | Bacteria | 5185 |
| 79 | Ga0105240_10171537 | 3300009093 | Bacteria | 2569 |
| 80 | Ga0105240_10215328 | 3300009093 | Unclassified | 2241 |
| 81 | Ga0111539_10245388 | 3300009094 | Unclassified | 2085 |
| 82 | Ga0105245_10080421 | 3300009098 | Bacteria | 2977 |
| 83 | Ga0105241_10009913 | 3300009174 | Bacteria | 7001 |
| 84 | Ga0105241_10062975 | 3300009174 | Bacteria | 2860 |
| 85 | Ga0105241_10120863 | 3300009174 | Bacteria | 2109 |
| 86 | Ga0105242_10017684 | 3300009176 | Bacteria | 5561 |
| 87 | Ga0105237_10000841 | 3300009545 | Bacteria | 41862 |
| 88 | Ga0105237_10005432 | 3300009545 | Bacteria | 14392 |
| 89 | Ga0105237_10018441 | 3300009545 | Bacteria | 7222 |
| 90 | Ga0105237_10053178 | 3300009545 | Bacteria | 4062 |
| 91 | Ga0105237_10057907 | 3300009545 | Bacteria | 3878 |
| 92 | Ga0105237_10058118 | 3300009545 | Bacteria | 3871 |
| 93 | Ga0105237_10141498 | 3300009545 | Unclassified | 2400 |
| 94 | Ga0105237_10253496 | 3300009545 | Bacteria | 1762 |
| 95 | Ga0105238_10018941 | 3300009551 | Bacteria | 7009 |
| 96 | Ga0105238_10110186 | 3300009551 | Bacteria | 2734 |
| 97 | Ga0105249_10274873 | 3300009553 | Bacteria | 1680 |
| 98 | Ga0105239_10000002 | 3300010375 | Bacteria | 610298 |
| 99 | Ga0105239_10000445 | 3300010375 | Bacteria | 60337 |
| 100 | Ga0105239_10000959 | 3300010375 | Bacteria | 40551 |
| 101 | Ga0105239_10006358 | 3300010375 | Bacteria | 13727 |
| 102 | Ga0105239_10008543 | 3300010375 | Bacteria | 11630 |
| 103 | Ga0105239_10071795 | 3300010375 | Bacteria | 3803 |
| 104 | Ga0105239_10073017 | 3300010375 | Unclassified | 3773 |
| 105 | Ga0105239_10077424 | 3300010375 | Bacteria | 3659 |
| 106 | Ga0105239_10188381 | 3300010375 | Bacteria | 2309 |
| 107 | Ga0105239_10263746 | 3300010375 | Bacteria | 1936 |
| 108 | Ga0105246_10196125 | 3300011119 | Bacteria | 1566 |
| 109 | Ga0157373_10003118 | 3300013100 | Bacteria | 12524 |
| 110 | Ga0157373_10091518 | 3300013100 | Bacteria | 2142 |
| 111 | Ga0157371_10000269 | 3300013102 | Bacteria | 70787 |
| 112 | Ga0157371_10017320 | 3300013102 | Bacteria | 5357 |
| 113 | Ga0157371_10032880 | 3300013102 | Bacteria | 3730 |
| 114 | Ga0157371_10061562 | 3300013102 | Bacteria | 2661 |
| 115 | Ga0157371_10086449 | 3300013102 | Bacteria | 2221 |
| 116 | Ga0157370_10083097 | 3300013104 | Bacteria | 3011 |
| 117 | Ga0157370_10083214 | 3300013104 | Bacteria | 3009 |
| 118 | Ga0157369_10060452 | 3300013105 | Bacteria | 4086 |
| 119 | Ga0157369_10275403 | 3300013105 | Bacteria | 1753 |
| 120 | Ga0157374_10003065 | 3300013296 | Bacteria | 14011 |
| 121 | Ga0157374_10003613 | 3300013296 | Bacteria | 13024 |
| 122 | Ga0157374_10032460 | 3300013296 | Bacteria | 4754 |
| 123 | Ga0157374_10250047 | 3300013296 | Bacteria | 1744 |
| 124 | Ga0157378_10011737 | 3300013297 | Bacteria | 7670 |
| 125 | Ga0157378_10025837 | 3300013297 | Bacteria | 5174 |
| 126 | Ga0163162_10000031 | 3300013306 | Bacteria | 157666 |
| 127 | Ga0163162_10005497 | 3300013306 | Bacteria | 12245 |
| 128 | Ga0163162_10006956 | 3300013306 | Bacteria | 10971 |
| 129 | Ga0163162_10526148 | 3300013306 | Bacteria | 1312 |
| 130 | Ga0157372_10001534 | 3300013307 | Bacteria | 25119 |
| 131 | Ga0157372_10002075 | 3300013307 | Bacteria | 21762 |
| 132 | Ga0157372_10054577 | 3300013307 | Bacteria | 4458 |
| 133 | Ga0157372_10074598 | 3300013307 | Bacteria | 3826 |
| 134 | Ga0157372_10187365 | 3300013307 | Unclassified | 2396 |
| 135 | Ga0157372_10451795 | 3300013307 | Bacteria | 1497 |
| 136 | Ga0157375_10016536 | 3300013308 | Bacteria | 6632 |
| 137 | Ga0157377_10029731 | 3300014745 | Bacteria | 2953 |
| 138 | Ga0157376_10111190 | 3300014969 | Bacteria | 2412 |
| 139 | Ga0182007_10031624 | 3300015262 | Bacteria | 1800 |
| 140 | Ga0163161_10014065 | 3300017792 | Bacteria | 5572 |
| 141 | Ga0213872_10008555 | 3300021361 | Bacteria | 4949 |
| 142 | Ga0207427_100766 | 3300025231 | Bacteria | 14625 |
| 143 | Ga0209437_100024 | 3300025233 | Bacteria | 592878 |
| 144 | Ga0209437_100052 | 3300025233 | Bacteria | 380548 |
| 145 | Ga0209026_1008501 | 3300025250 | Bacteria | 2133 |
| 146 | Ga0209129_1011078 | 3300025258 | Bacteria | 2185 |
| 147 | Ga0209233_1000067 | 3300025261 | Bacteria | 380554 |
| 148 | Ga0209233_1001304 | 3300025261 | Bacteria | 9948 |
| 149 | Ga0207647_10000463 | 3300025904 | Bacteria | 32923 |
| 150 | Ga0207647_10008145 | 3300025904 | Bacteria | 7530 |
| 151 | Ga0207645_10000082 | 3300025907 | Bacteria | 68372 |
| 152 | Ga0207705_10000015 | 3300025909 | Bacteria | 382901 |
| 153 | Ga0207705_10019105 | 3300025909 | Bacteria | 4901 |
| 154 | Ga0207705_10057398 | 3300025909 | Bacteria | 2807 |
| 155 | Ga0207707_10029641 | 3300025912 | Bacteria | 4785 |
| 156 | Ga0207695_10000189 | 3300025913 | Bacteria | 177142 |
| 157 | Ga0207695_10010555 | 3300025913 | Bacteria | 11295 |
| 158 | Ga0207695_10022088 | 3300025913 | Bacteria | 7238 |
| 159 | Ga0207695_10030752 | 3300025913 | Bacteria | 5907 |
| 160 | Ga0207695_10045184 | 3300025913 | Bacteria | 4678 |
| 161 | Ga0207671_10002710 | 3300025914 | Bacteria | 18563 |
| 162 | Ga0207671_10004889 | 3300025914 | Bacteria | 12594 |
| 163 | Ga0207671_10018410 | 3300025914 | Bacteria | 5360 |
| 164 | Ga0207671_10031894 | 3300025914 | Bacteria | 3924 |
| 165 | Ga0207671_10062274 | 3300025914 | Bacteria | 2770 |
| 166 | Ga0207671_10106915 | 3300025914 | Bacteria | 2125 |
| 167 | Ga0207671_10152841 | 3300025914 | Bacteria | 1784 |
| 168 | Ga0207671_10272683 | 3300025914 | Bacteria | 1333 |
| 169 | Ga0207649_10170447 | 3300025920 | Bacteria | 1516 |
| 170 | Ga0207652_10018039 | 3300025921 | Bacteria | 5785 |
| 171 | Ga0207694_10237152 | 3300025924 | Bacteria | 1490 |
| 172 | Ga0207659_10239526 | 3300025926 | Bacteria | 1467 |
| 173 | Ga0207644_10025333 | 3300025931 | Bacteria | 4080 |
| 174 | Ga0207690_10018517 | 3300025932 | Bacteria | 4271 |
| 175 | Ga0207704_10000078 | 3300025938 | Bacteria | 59491 |
| 176 | Ga0207691_10171992 | 3300025940 | Bacteria | 1897 |
| 177 | Ga0207667_10000009 | 3300025949 | Bacteria | 603135 |
| 178 | Ga0207667_10001584 | 3300025949 | Bacteria | 28609 |
| 179 | Ga0207667_10013812 | 3300025949 | Bacteria | 9224 |
| 180 | Ga0207667_10037382 | 3300025949 | Bacteria | 5190 |
| 181 | Ga0207667_10055162 | 3300025949 | Bacteria | 4178 |
| 182 | Ga0207667_10056234 | 3300025949 | Bacteria | 4134 |
| 183 | Ga0207651_10003963 | 3300025960 | Bacteria | 7353 |
| 184 | Ga0207640_10017457 | 3300025981 | Bacteria | 4199 |
| 185 | Ga0207640_10212297 | 3300025981 | Bacteria | 1475 |
| 186 | Ga0207677_10052982 | 3300026023 | Unclassified | 2759 |
| 187 | Ga0207703_10136206 | 3300026035 | Unclassified | 2126 |
| 188 | Ga0207639_10002536 | 3300026041 | Bacteria | 12254 |
| 189 | Ga0207639_10034265 | 3300026041 | Bacteria | 3752 |
| 190 | Ga0207639_10110347 | 3300026041 | Bacteria | 2241 |
| 191 | Ga0207639_10459084 | 3300026041 | Bacteria | 1158 |
| 192 | Ga0207702_10001984 | 3300026078 | Bacteria | 19874 |
| 193 | Ga0207702_10010918 | 3300026078 | Bacteria | 7575 |
| 194 | Ga0207648_10000472 | 3300026089 | Bacteria | 44933 |
| 195 | Ga0207648_10011256 | 3300026089 | Bacteria | 8435 |
| 196 | Ga0207674_10137295 | 3300026116 | Bacteria | 2406 |
| 197 | Ga0207683_10014226 | 3300026121 | Bacteria | 6778 |
| 198 | Ga0207698_10005582 | 3300026142 | Bacteria | 7782 |
| 199 | Ga0207698_10069290 | 3300026142 | Bacteria | 2789 |
| 200 | Ga0207698_10257243 | 3300026142 | Bacteria | 1602 |
| 201 | Ga0207698_10277424 | 3300026142 | Bacteria | 1548 |
| 202 | Ga0207698_10345889 | 3300026142 | Unclassified | 1402 |
| 203 | Ga0268266_10000052 | 3300028379 | Bacteria | 296230 |
| 204 | Ga0268266_10012058 | 3300028379 | Bacteria | 7481 |
| 205 | Ga0307517_10013049 | 3300028786 | Bacteria | 11328 |
| 206 | Ga0307515_10000280 | 3300028794 | Bacteria | 125330 |
| 207 | Ga0307515_10000353 | 3300028794 | Bacteria | 112876 |
| 208 | Ga0307515_10205708 | 3300028794 | Unclassified | 1829 |
| 209 | Ga0307507_10000345 | 3300033179 | Bacteria | 94462 |
| 210 | Ga0307510_10003325 | 3300033180 | Bacteria | 18736 |
| 211 | Ga0395899_0000312 | 3300037312 | Bacteria | 62304 |
| 212 | Ga0395899_0046529 | 3300037312 | Bacteria | 3232 |
| 213 | Ga0395900_0000014 | 3300037418 | Bacteria | 386513 |
| 214 | Ga0395900_0000128 | 3300037418 | Bacteria | 127446 |
| 215 | Ga0395900_0005426 | 3300037418 | Bacteria | 13362 |
| 216 | Ga0395898_0021189 | 3300037466 | Bacteria | 6594 |
| 217 | Ga0395898_0158733 | 3300037466 | Bacteria | 2163 |
| 218 | Ga0395905_0000037 | 3300037471 | Bacteria | 261808 |
| 219 | Ga0395901_0000166 | 3300038443 | Bacteria | 86352 |
| 220 | Ga0436361_0360494 | 3300039447 | Bacteria | 8737 |
| 221 | Ga0495650_0000087 | 3300046471 | Bacteria | 234870 |
| 222 | Ga0495585_0000167 | 3300046492 | Bacteria | 70874 |
| 223 | Ga0495585_0013561 | 3300046492 | Bacteria | 4763 |
| 224 | Ga0495596_0070072 | 3300046500 | Bacteria | 1363 |
| 225 | Ga0495606_0000052 | 3300046507 | Bacteria | 201529 |
| 226 | Ga0495606_0026982 | 3300046507 | Bacteria | 4080 |
| 227 | Ga0495610_0001840 | 3300046512 | Bacteria | 18389 |
| 228 | Ga0495616_0002580 | 3300046513 | Bacteria | 11923 |
| 229 | Ga0495644_0025219 | 3300046523 | Bacteria | 2258 |
| 230 | Ga0495648_0005125 | 3300046524 | Bacteria | 10975 |
| 231 | Ga0495652_0167846 | 3300046529 | Bacteria | 1697 |
| 232 | Ga0495609_0047679 | 3300046538 | Bacteria | 1917 |
| 233 | Ga0495622_0050025 | 3300046557 | Bacteria | 1940 |
| 234 | Ga0495633_0000029 | 3300046558 | Bacteria | 200381 |
| 235 | Ga0495668_0000070 | 3300046616 | Bacteria | 174051 |
| 236 | Ga0495668_0097641 | 3300046616 | Bacteria | 1608 |
| 237 | Ga0495625_0000008 | 3300046660 | Bacteria | 536165 |
| 238 | Ga0495625_0001080 | 3300046660 | Bacteria | 35353 |
| 239 | Ga0495625_0001647 | 3300046660 | Bacteria | 26189 |
| 240 | Ga0495661_0003217 | 3300046665 | Bacteria | 12191 |
| 241 | Ga0495661_0003891 | 3300046665 | Bacteria | 10914 |
| 242 | Ga0495661_0025617 | 3300046665 | Bacteria | 3808 |
| 243 | Ga0495649_0000018 | 3300046694 | Bacteria | 220586 |
| 244 | Ga0495687_000972 | 3300047443 | Bacteria | 29181 |
| 245 | Ga0495687_001574 | 3300047443 | Bacteria | 20718 |
| 246 | Ga0495685_031886 | 3300047447 | Bacteria | 1811 |
| 247 | Ga0495686_0000052 | 3300047472 | Bacteria | 262622 |
| 248 | Ga0495686_0131693 | 3300047472 | Bacteria | 1482 |
| 249 | Ga0501031_0059015 | 3300049568 | Unclassified | 2500 |
| 250 | Ga0501037_0066933 | 3300049573 | Unclassified | 2616 |
| 251 | Ga0501039_0068848 | 3300049575 | Unclassified | 2747 |
| 252 | Ga0501043_0237494 | 3300049579 | Unclassified | 1406 |
| 253 | Ga0501046_0110451 | 3300049580 | Unclassified | 2101 |
| 254 | Ga0501072_0219674 | 3300049588 | Unclassified | 1515 |
| 255 | Ga0501080_0262845 | 3300049742 | Unclassified | 1572 |
| 256 | Ga0501035_0122333 | 3300049822 | Unclassified | 2274 |
| 257 | Ga0501044_0027643 | 3300049823 | Bacteria | 5991 |
| 258 | nmdc:mga0k408_2290_c1 | 3300050493 | Bacteria | 10217 |
| 259 | nmdc:mga0k408_2552_c2 | 3300050493 | Bacteria | 4715 |
| 260 | Ga0500618_000037 | 3300053125 | Bacteria | 117320 |
| 261 | Ga0500622_0000891 | 3300053156 | Bacteria | 25423 |
| 262 | Ga0500624_000134 | 3300053157 | Bacteria | 31729 |
| 263 | 2599478266 | 2599185184 | Bacteria | 6430550 |
| 264 | 2839992639 | 2839989709 | Bacteria | 3773432 |
| 265 | 2884937323 | 2884933994 | Bacteria | 4535041 |
| 266 | 2919438961 | 2919437846 | Bacteria | 6199444 |
| 267 | 2928080684 | 2928078545 | Bacteria | 6534839 |
| 268 | 2928150909 | 2928147474 | Bacteria | 6512076 |
| 269 | 2932082932 | 2932082852 | Bacteria | 6563563 |
| 270 | Ga0501034_0021174 | |||
| 271 | JGI24737J22298_10003849 | |||
| 272 | JGI24735J21928_10000004 | |||
| 273 | JGI24744J21845_10002604 | |||
| 274 | JGI25162J39368_1000017 | |||
| 275 | JGI25162J39368_1002129 | |||
| 276 | JGI25164J39214_1002241 | |||
| 277 | JGI25406J46586_10028843 | |||
| 278 | JGI25165J46597_1001445 | |||
| 279 | rootH1_10005314 | |||
| 280 | rootH2_10001101 | |||
| 281 | rootH2_10043765 | |||
| 282 | rootH2_10108973 | |||
| 283 | rootH2_10227775 | |||
| 284 | rootL2_10196466 | |||
| 285 | rootH1_10009528 | |||
| 286 | rootH1_10231212 | |||
| 287 | rootH1_10333112 | |||
| 288 | Ga0058863_11903483 | |||
| 289 | Ga0065714_10006471 | |||
| 290 | Ga0065714_10069713 | |||
| 291 | Ga0070658_10000011 | |||
| 292 | Ga0070658_10059121 | |||
| 293 | Ga0070676_10000471 | |||
| 294 | Ga0070676_10143540 | |||
| 295 | Ga0070683_100035691 | |||
| 296 | Ga0070680_100234385 | |||
| 297 | Ga0068868_100062318 | |||
| 298 | Ga0070660_100014306 | |||
| 299 | Ga0070660_100096155 | |||
| 300 | Ga0070660_100177924 | |||
| 301 | Ga0070661_100113716 | |||
| 302 | Ga0070671_100029755 | |||
| 303 | Ga0070673_100006304 | |||
| 304 | Ga0070659_100004095 | |||
| 305 | Ga0070659_100038481 | |||
| 306 | Ga0070678_100002096 | |||
| 307 | Ga0070681_10065269 | |||
| 308 | Ga0070681_10174393 | |||
| 309 | Ga0068867_100003012 | |||
| 310 | Ga0068867_100108081 | |||
| 311 | Ga0070685_10073980 | |||
| 312 | Ga0070679_100032826 | |||
| 313 | Ga0070679_100137272 | |||
| 314 | Ga0070679_100195862 | |||
| 315 | Ga0070684_100262357 | |||
| 316 | Ga0068853_100012181 | |||
| 317 | Ga0068853_100049786 | |||
| 318 | Ga0068853_100064210 | |||
| 319 | Ga0068853_100091167 | |||
| 320 | Ga0068853_100295482 | |||
| 321 | Ga0070665_100000003 | |||
| 322 | Ga0070665_100006942 | |||
| 323 | Ga0068855_100000070 | |||
| 324 | Ga0068855_100000388 | |||
| 325 | Ga0068855_100010991 | |||
| 326 | Ga0068855_100071180 | |||
| 327 | Ga0068855_100258920 | |||
| 328 | Ga0068857_100037446 | |||
| 329 | Ga0068854_100022715 | |||
| 330 | Ga0068854_100156387 | |||
| 331 | Ga0068856_100002273 | |||
| 332 | Ga0068856_100005531 | |||
| 333 | Ga0068856_100083807 | |||
| 334 | Ga0068852_100006806 | |||
| 335 | Ga0068852_100063874 | |||
| 336 | Ga0068852_100128587 | |||
| 337 | Ga0068858_100280607 | |||
| 338 | Ga0075366_10002253 | |||
| 339 | Ga0075366_10029400 | |||
| 340 | Ga0097621_100000020 | |||
| 341 | Ga0097621_100042441 | |||
| 342 | Ga0068871_100000130 | |||
| 343 | Ga0068865_100000050 | |||
| 344 | Ga0105240_10000728 | |||
| 345 | Ga0105240_10010235 | |||
| 346 | Ga0105240_10017595 | |||
| 347 | Ga0105240_10051410 | |||
| 348 | Ga0105240_10171537 | |||
| 349 | Ga0105240_10215328 | |||
| 350 | Ga0111539_10245388 | |||
| 351 | Ga0105245_10080421 | |||
| 352 | Ga0105241_10009913 | |||
| 353 | Ga0105241_10062975 | |||
| 354 | Ga0105241_10120863 | |||
| 355 | Ga0105242_10017684 | |||
| 356 | Ga0105237_10000841 | |||
| 357 | Ga0105237_10005432 | |||
| 358 | Ga0105237_10018441 | |||
| 359 | Ga0105237_10053178 | |||
| 360 | Ga0105237_10057907 | |||
| 361 | Ga0105237_10058118 | |||
| 362 | Ga0105237_10141498 | |||
| 363 | Ga0105237_10253496 | |||
| 364 | Ga0105238_10018941 | |||
| 365 | Ga0105238_10110186 | |||
| 366 | Ga0105249_10274873 | |||
| 367 | Ga0105239_10000002 | |||
| 368 | Ga0105239_10000445 | |||
| 369 | Ga0105239_10000959 | |||
| 370 | Ga0105239_10006358 | |||
| 371 | Ga0105239_10008543 | |||
| 372 | Ga0105239_10071795 | |||
| 373 | Ga0105239_10073017 | |||
| 374 | Ga0105239_10077424 | |||
| 375 | Ga0105239_10188381 | |||
| 376 | Ga0105239_10263746 | |||
| 377 | Ga0105246_10196125 | |||
| 378 | Ga0157373_10003118 | |||
| 379 | Ga0157373_10091518 | |||
| 380 | Ga0157371_10000269 | |||
| 381 | Ga0157371_10017320 | |||
| 382 | Ga0157371_10032880 | |||
| 383 | Ga0157371_10061562 | |||
| 384 | Ga0157371_10086449 | |||
| 385 | Ga0157370_10083097 | |||
| 386 | Ga0157370_10083214 | |||
| 387 | Ga0157369_10060452 | |||
| 388 | Ga0157369_10275403 | |||
| 389 | Ga0157374_10003065 | |||
| 390 | Ga0157374_10003613 | |||
| 391 | Ga0157374_10032460 | |||
| 392 | Ga0157374_10250047 | |||
| 393 | Ga0157378_10011737 | |||
| 394 | Ga0157378_10025837 | |||
| 395 | Ga0163162_10000031 | |||
| 396 | Ga0163162_10005497 | |||
| 397 | Ga0163162_10006956 | |||
| 398 | Ga0163162_10526148 | |||
| 399 | Ga0157372_10001534 | |||
| 400 | Ga0157372_10002075 | |||
| 401 | Ga0157372_10054577 | |||
| 402 | Ga0157372_10074598 | |||
| 403 | Ga0157372_10187365 | |||
| 404 | Ga0157372_10451795 | |||
| 405 | Ga0157375_10016536 | |||
| 406 | Ga0157377_10029731 | |||
| 407 | Ga0157376_10111190 | |||
| 408 | Ga0182007_10031624 | |||
| 409 | Ga0163161_10014065 | |||
| 410 | Ga0213872_10008555 | |||
| 411 | Ga0207427_100766 | |||
| 412 | Ga0209437_100024 | |||
| 413 | Ga0209437_100052 | |||
| 414 | Ga0209026_1008501 | |||
| 415 | Ga0209129_1011078 | |||
| 416 | Ga0209233_1000067 | |||
| 417 | Ga0209233_1001304 | |||
| 418 | Ga0207647_10000463 | |||
| 419 | Ga0207647_10008145 | |||
| 420 | Ga0207645_10000082 | |||
| 421 | Ga0207705_10000015 | |||
| 422 | Ga0207705_10019105 | |||
| 423 | Ga0207705_10057398 | |||
| 424 | Ga0207707_10029641 | |||
| 425 | Ga0207695_10000189 | |||
| 426 | Ga0207695_10010555 | |||
| 427 | Ga0207695_10022088 | |||
| 428 | Ga0207695_10030752 | |||
| 429 | Ga0207695_10045184 | |||
| 430 | Ga0207671_10002710 | |||
| 431 | Ga0207671_10004889 | |||
| 432 | Ga0207671_10018410 | |||
| 433 | Ga0207671_10031894 | |||
| 434 | Ga0207671_10062274 | |||
| 435 | Ga0207671_10106915 | |||
| 436 | Ga0207671_10152841 | |||
| 437 | Ga0207671_10272683 | |||
| 438 | Ga0207649_10170447 | |||
| 439 | Ga0207652_10018039 | |||
| 440 | Ga0207694_10237152 | |||
| 441 | Ga0207659_10239526 | |||
| 442 | Ga0207644_10025333 | |||
| 443 | Ga0207690_10018517 | |||
| 444 | Ga0207704_10000078 | |||
| 445 | Ga0207691_10171992 | |||
| 446 | Ga0207667_10000009 | |||
| 447 | Ga0207667_10001584 | |||
| 448 | Ga0207667_10013812 | |||
| 449 | Ga0207667_10037382 | |||
| 450 | Ga0207667_10055162 | |||
| 451 | Ga0207667_10056234 | |||
| 452 | Ga0207651_10003963 | |||
| 453 | Ga0207640_10017457 | |||
| 454 | Ga0207640_10212297 | |||
| 455 | Ga0207677_10052982 | |||
| 456 | Ga0207703_10136206 | |||
| 457 | Ga0207639_10002536 | |||
| 458 | Ga0207639_10034265 | |||
| 459 | Ga0207639_10110347 | |||
| 460 | Ga0207639_10459084 | |||
| 461 | Ga0207702_10001984 | |||
| 462 | Ga0207702_10010918 | |||
| 463 | Ga0207648_10000472 | |||
| 464 | Ga0207648_10011256 | |||
| 465 | Ga0207674_10137295 | |||
| 466 | Ga0207683_10014226 | |||
| 467 | Ga0207698_10005582 | |||
| 468 | Ga0207698_10069290 | |||
| 469 | Ga0207698_10257243 | |||
| 470 | Ga0207698_10277424 | |||
| 471 | Ga0207698_10345889 | |||
| 472 | Ga0268266_10000052 | |||
| 473 | Ga0268266_10012058 | |||
| 474 | Ga0307517_10013049 | |||
| 475 | Ga0307515_10000280 | |||
| 476 | Ga0307515_10000353 | |||
| 477 | Ga0307515_10205708 | |||
| 478 | Ga0307507_10000345 | |||
| 479 | Ga0307510_10003325 | |||
| 480 | Ga0395899_0000312 | |||
| 481 | Ga0395899_0046529 | |||
| 482 | Ga0395900_0000014 | |||
| 483 | Ga0395900_0000128 | |||
| 484 | Ga0395900_0005426 | |||
| 485 | Ga0395898_0021189 | |||
| 486 | Ga0395898_0158733 | |||
| 487 | Ga0395905_0000037 | |||
| 488 | Ga0395901_0000166 | |||
| 489 | Ga0436361_0360494 | |||
| 490 | Ga0495650_0000087 | |||
| 491 | Ga0495585_0000167 | |||
| 492 | Ga0495585_0013561 | |||
| 493 | Ga0495596_0070072 | |||
| 494 | Ga0495606_0000052 | |||
| 495 | Ga0495606_0026982 | |||
| 496 | Ga0495610_0001840 | |||
| 497 | Ga0495616_0002580 | |||
| 498 | Ga0495644_0025219 | |||
| 499 | Ga0495648_0005125 | |||
| 500 | Ga0495652_0167846 | |||
| 501 | Ga0495609_0047679 | |||
| 502 | Ga0495622_0050025 | |||
| 503 | Ga0495633_0000029 | |||
| 504 | Ga0495668_0000070 | |||
| 505 | Ga0495668_0097641 | |||
| 506 | Ga0495625_0000008 | |||
| 507 | Ga0495625_0001080 | |||
| 508 | Ga0495625_0001647 | |||
| 509 | Ga0495661_0003217 | |||
| 510 | Ga0495661_0003891 | |||
| 511 | Ga0495661_0025617 | |||
| 512 | Ga0495649_0000018 | |||
| 513 | Ga0495687_000972 | |||
| 514 | Ga0495687_001574 | |||
| 515 | Ga0495685_031886 | |||
| 516 | Ga0495686_0000052 | |||
| 517 | Ga0495686_0131693 | |||
| 518 | Ga0501031_0059015 | |||
| 519 | Ga0501037_0066933 | |||
| 520 | Ga0501039_0068848 | |||
| 521 | Ga0501043_0237494 | |||
| 522 | Ga0501046_0110451 | |||
| 523 | Ga0501072_0219674 | |||
| 524 | Ga0501080_0262845 | |||
| 525 | Ga0501035_0122333 | |||
| 526 | Ga0501044_0027643 | |||
| 527 | nmdc:mga0k408_2290_c1 | |||
| 528 | nmdc:mga0k408_2552_c2 | |||
| 529 | Ga0500618_000037 | |||
| 530 | Ga0500622_0000891 | |||
| 531 | Ga0500624_000134 | |||
| 532 | 2599478266 | |||
| 533 | 2839992639 | |||
| 534 | 2884937323 | |||
| 535 | 2919438961 | |||
| 536 | 2928080684 | |||
| 537 | 2928150909 | |||
| 538 | 2932082932 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1jwa-assembly1.cif.gz_B-2 | structure of the atp-bound moeb-moad protein complex | 0.9227 | 1 | 240 |
| 5um6-assembly1.cif.gz_A | crystal structure of s. pombe uba1 in a closed conformation | 0.9186 | 17 | 159 |
| 1jw9-assembly1.cif.gz_B | structure of the native moeb-moad protein complex | 0.9105 | 1 | 249 |
| 1zfn-assembly1.cif.gz_B | structural analysis of escherichia coli thif | 0.9105 | 1 | 242 |
| 1zud-assembly3.cif.gz_1 | structure of this-thif protein complex | 0.909 | 1 | 247 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0R0GHT9_1_200_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.956 | 54 | 241 | 3.40.50.720 |
| af_A3ACF3_161_294_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.947 | 118 | 244 | 3.40.50.720 |
| af_Q54L40_1_118_3.50.50.80 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 1 | 0.9388 | 18 | 121 | 3.50.50.80 |
| af_O44510_10_262_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.931 | 1 | 244 | 3.40.50.720 |
| af_P9WM11_85_248_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9248 | 19 | 149 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3D3YVJ3-F1-model_v4 | Molybdopterin biosynthesis protein MoeB | 0.9915 | 18 | 146 |
GO:0004792
GO:0005829 GO:0008146 GO:0008641 GO:0016779 |
| AF-A0A7W0CTN1-F1-model_v4 | THIF-type NAD/FAD binding fold domain-containing protein | 0.9831 | 20 | 99 |
GO:0008641
GO:0061503 GO:0061504 |
| AF-A0A2V9HWS4-F1-model_v4 | Thiamine biosynthesis protein ThiF | 0.9713 | 16 | 159 |
GO:0008641
GO:0016020 GO:0061503 GO:0061504 |
| AF-A0A3M1DJT2-F1-model_v4 | tRNA threonylcarbamoyladenosine dehydratase | 0.9702 | 17 | 145 |
GO:0008641
GO:0061503 GO:0061504 |
| AF-A0A3D3YVJ3-F1-model_v4 | Molybdopterin biosynthesis protein MoeB | 0.9691 | 18 | 146 |
GO:0004792
GO:0005829 GO:0008146 GO:0008641 GO:0016779 |