F376571

General Info

Members Datasets Scaffolds Average Seq Length
269 220 538 376

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2515154112|2515629378
Length 418
Sequence IAGKVTSYAAGLDALKHENRLQSLRPRTGIDFSSNDYLALASAPRMKKAIVTALEAGTSIRAGGSRLLGGNCEEHECLEAAAARFFGAQTALFFGGGYVAKVAVLTTLPQRDDLLVLDSLVHASIHEGARAGRAAFRITAHNDPQVIESAICDWRAAGGAGQVWIVVESLYSMDGDFAPLEDLLAIADRHDAFLVVDEAHATGVYGEQGRGLTGPFEGRENLLVVHTCGKALGAAGALVTASGVLRDFMINRCRPFIFATAPSPLMAVAVREALLILQEEPERQQWLAKLVAFTHQEMVARGERSPSNSQILPYIVGENARAMRLASALQARGFDIRGIRPPTVPTGTARLRISLTVNVGEDEVRAMLDALAEETGANLDEPADRGDRHRCRDRQICLFGRPCPSSRRELLETNSGRC

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
3 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
4 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
5 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
8 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
9 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
12 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
13 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
14 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
15 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
18 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
19 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
20 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
21 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
22 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
23 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
24 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
25 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
38 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
39 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
40 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
41 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
43 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
44 3300033442 Root nodule microbial communities collected in Santa Monica, California, United States - Edamame nodules 1 Metagenome Nodule
45 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
46 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
47 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
48 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
49 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
50 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
51 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
52 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
53 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
54 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
55 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
56 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
57 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
58 2507262055 Bradyrhizobium sp. WSM1417 Isolate Nodule
59 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
60 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
61 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
62 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
63 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
64 2513237095 Bradyrhizobium diazoefficiens USDA 122 Isolate Nodule
65 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
66 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
67 2513237102 Bradyrhizobium japonicum USDA 135 Isolate Nodule
68 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
69 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
70 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
71 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
72 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
73 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
74 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
75 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
76 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
77 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
78 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
79 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
80 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
81 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
82 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
83 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
84 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
85 2816332527 Bradyrhizobium diazoefficiens Y21 Isolate Nodule
86 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
87 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
88 2824617872 Bradyrhizobium sp. HAMBI 2133 Isolate Unclassified
89 2824626560 Bradyrhizobium sp. HAMBI 2149 Isolate Unclassified
90 2824635225 Bradyrhizobium sp. HAMBI 2136 Isolate Unclassified
91 2824644064 Bradyrhizobium sp. HAMBI 2137 Isolate Unclassified
92 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
93 2824661429 Bradyrhizobium sp. HAMBI 2115 Isolate Unclassified
94 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
95 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
96 2824714736 Bradyrhizobium sp. HAMBI 2151 Isolate Unclassified
97 2824723954 Bradyrhizobium sp. HAMBI 2152 Isolate Unclassified
98 2824732956 Bradyrhizobium sp. HAMBI 2153 Isolate Unclassified
99 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
100 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
101 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
102 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
103 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
104 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
105 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
106 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
107 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
108 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
109 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
110 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
111 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
112 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
113 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
114 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
115 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
116 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
117 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
118 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
119 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
120 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
121 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
122 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
123 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
124 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
125 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
126 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
127 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
128 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
129 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
130 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
131 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
132 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
133 2904699407
134 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
135 2906610324
136 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
137 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
138 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
139 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
140 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
141 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
142 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
143 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
144 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
145 2922425934
146 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
147 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
148 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
149 2932794094 Bradyrhizobium sp. S3.2.6 Isolate Nodule
150 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
151 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
152 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
153 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
154 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
155 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
156 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
157 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
158 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
159 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
160 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
161 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
162 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
163 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
164 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
165 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
166 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
167 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule
168 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
169 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
170 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
171 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
172 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
173 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
174 2935975950 Bradyrhizobium sp. GM2.2 Isolate Nodule
175 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
176 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
177 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
178 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
179 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
180 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
181 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
182 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
183 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
184 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
185 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
186 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
187 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
188 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
189 3005587118 Bradyrhizobium glycinis CNPSo 4016 Isolate Unclassified
190 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
191 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
192 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
193 8006994254 Bradyrhizobium sp. sGM-13 Isolate Nodule
194 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
195 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
196 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
197 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
198 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
199 8016575299 Bradyrhizobium sp. LM2.9 Isolate Nodule
200 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
201 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
202 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
203 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
204 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
205 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
206 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
207 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
208 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
209 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
210 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
211 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
212 8019629233 Bradyrhizobium sp. GM6.1 Isolate Nodule
213 8019638758 Bradyrhizobium sp. GM5.1 Isolate Nodule
214 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule
215 8019659431 Bradyrhizobium sp. GM22.5 Isolate Nodule
216 8019668869 Bradyrhizobium sp. GM2.4 Isolate Nodule
217 8019678201 Bradyrhizobium sp. GM0.4 Isolate Nodule
218 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
219 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule
220 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 25.19
Metatranscriptomes 0
Isolates 74.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 64.68
Rhizoplane 1.49
Rhizosphere 14.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100126267 3300005347 Bacteria 2049
2 Ga0070674_100065486 3300005356 Bacteria 2550
3 Ga0070663_100235008 3300005455 Bacteria 1445
4 Ga0070678_100041870 3300005456 Bacteria 3251
5 Ga0070662_100104363 3300005457 Bacteria 2151
6 Ga0068867_100050994 3300005459 Bacteria 3051
7 Ga0070672_100164145 3300005543 Bacteria 1844
8 Ga0070702_100197056 3300005615 Bacteria 1330
9 Ga0068866_10008562 3300005718 Bacteria 4318
10 Ga0068860_100241624 3300005843 Bacteria 1757
11 Ga0068862_100123086 3300005844 Bacteria 2288
12 Ga0068865_100035782 3300006881 Bacteria 3343
13 Ga0099825_1026055 3300006941 Bacteria 3170
14 Ga0099822_1011091 3300006943 Bacteria 11056
15 Ga0111539_10086008 3300009094 Bacteria 3695
16 Ga0105245_10202220 3300009098 Bacteria 1908
17 Ga0163162_10195098 3300013306 Bacteria 2153
18 Ga0157375_10240306 3300013308 Bacteria 1971
19 Ga0157379_10138659 3300014968 Bacteria 2192
20 Ga0214544_1000109 3300021320 Bacteria 113330
21 Ga0214542_1023070 3300021321 Bacteria 3823
22 Ga0214545_1022501 3300021324 Bacteria 4405
23 Ga0214543_1021142 3300021327 Bacteria 5007
24 Ga0209233_1021900 3300025261 Bacteria 1645
25 Ga0207688_10056968 3300025901 Bacteria 2196
26 Ga0207657_10326604 3300025919 Bacteria 1212
27 Ga0207700_10007972 3300025928 Bacteria 6522
28 Ga0207706_10032110 3300025933 Bacteria 4675
29 Ga0207669_10090922 3300025937 Bacteria 1986
30 Ga0207691_10075808 3300025940 Bacteria 3032
31 Ga0207712_10013104 3300025961 Bacteria 5312
32 Ga0207658_10167024 3300025986 Bacteria 1809
33 Ga0207678_10045986 3300026067 Bacteria 3775
34 Ga0207648_10055349 3300026089 Bacteria 3463
35 Ga0207675_100055703 3300026118 Bacteria 3689
36 Ga0207683_10016191 3300026121 Bacteria 6348
37 Ga0209389_1000048 3300027296 Bacteria 115074
38 Ga0209589_1000004 3300027357 Bacteria 578529
39 Ga0209589_1000029 3300027357 Bacteria 147486
40 Ga0209589_1000034 3300027357 Bacteria 138086
41 Ga0209489_100004 3300027361 Bacteria 578529
42 Ga0209489_100009 3300027361 Bacteria 263873
43 Ga0209489_100476 3300027361 Bacteria 75107
44 Ga0209489_104793 3300027361 Bacteria 24481
45 Ga0209700_100004 3300027363 Bacteria 578529
46 Ga0209700_100015 3300027363 Bacteria 257238
47 Ga0209700_100020 3300027363 Bacteria 235733
48 Ga0209700_100026 3300027363 Bacteria 224498
49 Ga0268264_10096919 3300028381 Bacteria 2556
50 Ga0265331_10006679 3300031250 Bacteria 6775
51 Ga0265314_10024378 3300031711 Bacteria 4587
52 Ga0315911_1000019 3300033442 Bacteria 146597
53 Ga0395905_0125467 3300037471 Bacteria 2414
54 Ga0436361_0473486 3300039447 Bacteria 1655
55 Ga0466966_0249017 3300044684 Bacteria 1070
56 Ga0495651_0094237 3300046462 Bacteria 2241
57 Ga0495669_0021707 3300046684 Bacteria 2789
58 Ga0495672_0070874 3300047320 Bacteria 1973
59 Ga0495677_0039785 3300047445 Bacteria 1719
60 Ga0496102_0117303 3300048905 Bacteria 2484
61 Ga0496102_0138168 3300048905 Bacteria 2283
62 Ga0496106_0308667 3300048909 Bacteria 1269
63 Ga0496121_0105607 3300048924 Bacteria 2161
64 Ga0496124_0104568 3300048927 Bacteria 2289
65 Ga0496126_0016759 3300048929 Bacteria 7318
66 Ga0496126_0098713 3300048929 Bacteria 2559
67 Ga0496126_0117057 3300048929 Bacteria 2315
68 2515629378 2515154112 Bacteria 8294334
69 2507506409 2507262055 Bacteria 8048963
70 2507506633 2507262055 Bacteria 8048963
71 2508540704 2508501009 Bacteria 7784016
72 2508696690 2508501042 Bacteria 8719808
73 2509152351 2508501128 Bacteria 8613869
74 2513622815 2513237092 Bacteria 8341956
75 2513625931 2513237092 Bacteria 8341956
76 2513643974 2513237094 Bacteria 8789602
77 2513653282 2513237095 Bacteria 8976980
78 2513658541 2513237096 Bacteria 8722461
79 2513674538 2513237098 Bacteria 9902361
80 2513706221 2513237102 Bacteria 7703324
81 2513723028 2513237104 Bacteria 10034502
82 2513860123 2513237137 Bacteria 9558895
83 2513863721 2513237137 Bacteria 9558895
84 2513879778 2513237139 Bacteria 8737671
85 2513887971 2513237141 Bacteria 8496279
86 2513920657 2513237145 Bacteria 8979722
87 2514015903 2513237161 Bacteria 8871253
88 2514017514 2513237161 Bacteria 8871253
89 2517108260 2517093001 Bacteria 9002274
90 2517888577 2517572143 Bacteria 9484767
91 2517890750 2517572143 Bacteria 9484767
92 2524443336 2524023205 Bacteria 8918781
93 2524463734 2524023210 Bacteria 9029266
94 2524535110 2524023228 Bacteria 10118060
95 2617353377 2617270735 Bacteria 9163226
96 2671119757 2667528175 Bacteria 7532676
97 2723843924 2721755755 Bacteria 8322773
98 2745074985 2744054633 Bacteria 8678936
99 2793067397 2791355197 Bacteria 8420563
100 2805922013 2802429603 Bacteria 8777136
101 2805922314 2802429603 Bacteria 8777136
102 2805922469 2802429603 Bacteria 8777136
103 2818243702 2816332527 Bacteria 8933356
104 2824601224 2824600985 Bacteria 8488197
105 2824609607 2824609381 Bacteria 8672835
106 2824618351 2824617872 Bacteria 8814715
107 2824626940 2824626560 Bacteria 8813858
108 2824635390 2824635225 Bacteria 8785348
109 2824644229 2824644064 Bacteria 8743947
110 2824653811 2824653114 Bacteria 8493680
111 2824662718 2824661429 Bacteria 9877870
112 2824679686 2824679649 Bacteria 8248951
113 2824704826 2824704595 Bacteria 9667483
114 2824714901 2824714736 Bacteria 8717648
115 2824724035 2824723954 Bacteria 8758240
116 2824733234 2824732956 Bacteria 7810675
117 2824747442 2824746037 Bacteria 7911610
118 2824754829 2824753945 Bacteria 9787441
119 2824764579 2824763712 Bacteria 9792355
120 2824779611 2824773399 Bacteria 8360218
121 2838124947 2838122688 Bacteria 8803140
122 2838129798 2838122688 Bacteria 8803140
123 2841957649 2841949485 Bacteria 8680857
124 2841963843 2841957949 Bacteria 8652217
125 2841965176 2841957949 Bacteria 8652217
126 2841974169 2841966195 Bacteria 8673214
127 2841976694 2841974524 Bacteria 8931498
128 2841986171 2841983080 Bacteria 8395090
129 2842045698 2842038055 Bacteria 8002051
130 2842053521 2842045827 Bacteria 8006841
131 2847933504 2847930680 Bacteria 9342022
132 2847940407 2847939898 Bacteria 8606328
133 2874595061 2874590934 Bacteria 8299676
134 2874613736 2874612657 Bacteria 8252029
135 2874622102 2874620515 Bacteria 8290088
136 2876765218 2876761206 Bacteria 10111113
137 2876767308 2876761206 Bacteria 10111113
138 2876774579 2876771140 Bacteria 8287509
139 2876812687 2876808645 Bacteria 8824342
140 2876823317 2876818435 Bacteria 8274608
141 2879079148 2879074833 Bacteria 8279565
142 2879088884 2879083081 Bacteria 8587928
143 2879100796 2879099564 Bacteria 10442239
144 2879114019 2879110137 Bacteria 8907982
145 2881666801 2881665667 Bacteria 8175609
146 2885372436 2885366525 Bacteria 8326213
147 2885381798 2885374607 Bacteria 8927485
148 2885383489 2885383462 Bacteria 9473874
149 2888380691 2888378607 Bacteria 9652610
150 2888386686 2888378607 Bacteria 9652610
151 2903754580 2903748898 Bacteria 9972761
152 2903769369 2903768456 Bacteria 9749579
153 2904666784 2904666416 Bacteria 8226587
154 2904692875 2904690495 Bacteria 9412302
155 2904693633 2904690495 Bacteria 9412302
156 2904708185
157 2904713037 2904711408 Bacteria 9771557
158 2906614068
159 2906630899 2906626472 Bacteria 8826946
160 2906637738 2906635258 Bacteria 8601019
161 2906643233 2906635258 Bacteria 8601019
162 2906644821 2906643746 Bacteria 8722424
163 2906650745 2906643746 Bacteria 8722424
164 2906668306 2906660503 Bacteria 8595048
165 2908747113 2908739725 Bacteria 8628932
166 2908758295 2908756301 Bacteria 8864324
167 2908758597 2908756301 Bacteria 8864324
168 2908777800 2908775508 Bacteria 8092255
169 2922366268 2922361189 Bacteria 7436256
170 2922386666 2922386360 Bacteria 7017218
171 2922434555
172 2929621647 2929615660 Bacteria 9193770
173 2929631949 2929624759 Bacteria 9339455
174 2932793687 2932784394 Bacteria 9704911
175 2932801099 2932794094 Bacteria 7915132
176 2932806134 2932801729 Bacteria 7987968
177 2933583330 2933577622 Bacteria 9116884
178 2935613974 2935608549 Bacteria 8203142
179 2935637591 2935630451 Bacteria 8169952
180 2935646763 2935638405 Bacteria 10015038
181 2935647711 2935638405 Bacteria 10015038
182 2935652692 2935648319 Bacteria 8801166
183 2935652773 2935648319 Bacteria 8801166
184 2935661241 2935656913 Bacteria 8965014
185 2935661323 2935656913 Bacteria 8965014
186 2935674537 2935665750 Bacteria 9571747
187 2935690670 2935684952 Bacteria 9590419
188 2935712408 2935703347 Bacteria 10242284
189 2935717634 2935713505 Bacteria 9608509
190 2935727216 2935722832 Bacteria 9608746
191 2935735986 2935732158 Bacteria 9706831
192 2935744743 2935741537 Bacteria 9707219
193 2935755679 2935750917 Bacteria 9590372
194 2935781601 2935777560 Bacteria 8077691
195 2935827223 2935819856 Bacteria 8261050
196 2935836047 2935827899 Bacteria 10038562
197 2935836406 2935827899 Bacteria 10038562
198 2935843545 2935837841 Bacteria 9454360
199 2935854500 2935847175 Bacteria 8228321
200 2935872856 2935864058 Bacteria 9784707
201 2935882168 2935873716 Bacteria 9632195
202 2935882818 2935873716 Bacteria 9632195
203 2935889048 2935883170 Bacteria 7964738
204 2935889580 2935883170 Bacteria 7964738
205 2935967132 2935959822 Bacteria 7869783
206 2935983320 2935975950 Bacteria 8347125
207 2935983434 2935975950 Bacteria 8347125
208 2935991512 2935984226 Bacteria 8302647
209 2935991594 2935984226 Bacteria 8302647
210 2936000026 2935992306 Bacteria 9802711
211 2936015529 2936011229 Bacteria 8801034
212 2936015610 2936011229 Bacteria 8801034
213 2936024163 2936019824 Bacteria 8804134
214 2936024244 2936019824 Bacteria 8804134
215 2936033415 2936028420 Bacteria 8965941
216 2936033495 2936028420 Bacteria 8965941
217 2936051271 2936046547 Bacteria 8903709
218 2936051353 2936046547 Bacteria 8903709
219 2936062551 2936055302 Bacteria 8785755
220 2940561040 2940556831 Bacteria 9590747
221 2941514172 2941507105 Bacteria 8166816
222 2941522133 2941515067 Bacteria 8166720
223 2941529871 2941523033 Bacteria 8169134
224 2941546437 2941538514 Bacteria 9402094
225 3005483674 3005474847 Bacteria 9259049
226 3005490717 3005483717 Bacteria 7877331
227 3005589874 3005587118 Bacteria 7794411
228 8006936531 8006933436 Bacteria 10410654
229 8006976497 8006973647 Bacteria 10679141
230 8006992221 8006984368 Bacteria 9651211
231 8006999387 8006994254 Bacteria 8309700
232 8016527614 8016522445 Bacteria 8156687
233 8016544177 8016539877 Bacteria 8155419
234 8016548873 8016548790 Bacteria 8155074
235 8016556172 8016548790 Bacteria 8155074
236 8016566125 8016557553 Bacteria 8154380
237 8016571016 8016566248 Bacteria 8158151
238 8016575636 8016575299 Bacteria 8154085
239 8016583522 8016575299 Bacteria 8154085
240 8016584174 8016583857 Bacteria 10421953
241 8016584473 8016583857 Bacteria 10421953
242 8016595299 8016595262 Bacteria 8149947
243 8016602197 8016595262 Bacteria 8149947
244 8016612875 8016603502 Bacteria 8731218
245 8016613178 8016613128 Bacteria 8794220
246 8016617030 8016613128 Bacteria 8794220
247 8019530446 8019530166 Bacteria 8155624
248 8019532525 8019530166 Bacteria 8155624
249 8019562126 8019555841 Bacteria 9642137
250 8019572192 8019565922 Bacteria 9639779
251 8019585719 8019576017 Bacteria 10049540
252 8019593657 8019586578 Bacteria 10212056
253 8019597768 8019597564 Bacteria 10041141
254 8019610617 8019608314 Bacteria 10042931
255 8019621159 8019619141 Bacteria 9218857
256 8019629084 8019619141 Bacteria 9218857
257 8019629380 8019629233 Bacteria 8687553
258 8019632208 8019629233 Bacteria 8687553
259 8019648601 8019638758 Bacteria 9062356
260 8019654320 8019648815 Bacteria 10014479
261 8019659491 8019659431 Bacteria 8577854
262 8019660127 8019659431 Bacteria 8577854
263 8019668995 8019668869 Bacteria 8791617
264 8019669551 8019668869 Bacteria 8791617
265 8019678524 8019678201 Bacteria 8863603
266 8019686523 8019678201 Bacteria 8863603
267 8055744152 8055742211 Bacteria 9226248
268 8056679997 8056673599 Bacteria 7871253
269 8056684685 8056681323 Bacteria 8472857
270 Ga0070668_100126267
271 Ga0070674_100065486
272 Ga0070663_100235008
273 Ga0070678_100041870
274 Ga0070662_100104363
275 Ga0068867_100050994
276 Ga0070672_100164145
277 Ga0070702_100197056
278 Ga0068866_10008562
279 Ga0068860_100241624
280 Ga0068862_100123086
281 Ga0068865_100035782
282 Ga0099825_1026055
283 Ga0099822_1011091
284 Ga0111539_10086008
285 Ga0105245_10202220
286 Ga0163162_10195098
287 Ga0157375_10240306
288 Ga0157379_10138659
289 Ga0214544_1000109
290 Ga0214542_1023070
291 Ga0214545_1022501
292 Ga0214543_1021142
293 Ga0209233_1021900
294 Ga0207688_10056968
295 Ga0207657_10326604
296 Ga0207700_10007972
297 Ga0207706_10032110
298 Ga0207669_10090922
299 Ga0207691_10075808
300 Ga0207712_10013104
301 Ga0207658_10167024
302 Ga0207678_10045986
303 Ga0207648_10055349
304 Ga0207675_100055703
305 Ga0207683_10016191
306 Ga0209389_1000048
307 Ga0209589_1000004
308 Ga0209589_1000029
309 Ga0209589_1000034
310 Ga0209489_100004
311 Ga0209489_100009
312 Ga0209489_100476
313 Ga0209489_104793
314 Ga0209700_100004
315 Ga0209700_100015
316 Ga0209700_100020
317 Ga0209700_100026
318 Ga0268264_10096919
319 Ga0265331_10006679
320 Ga0265314_10024378
321 Ga0315911_1000019
322 Ga0395905_0125467
323 Ga0436361_0473486
324 Ga0466966_0249017
325 Ga0495651_0094237
326 Ga0495669_0021707
327 Ga0495672_0070874
328 Ga0495677_0039785
329 Ga0496102_0117303
330 Ga0496102_0138168
331 Ga0496106_0308667
332 Ga0496121_0105607
333 Ga0496124_0104568
334 Ga0496126_0016759
335 Ga0496126_0098713
336 Ga0496126_0117057
337 2515629378
338 2507506409
339 2507506633
340 2508540704
341 2508696690
342 2509152351
343 2513622815
344 2513625931
345 2513643974
346 2513653282
347 2513658541
348 2513674538
349 2513706221
350 2513723028
351 2513860123
352 2513863721
353 2513879778
354 2513887971
355 2513920657
356 2514015903
357 2514017514
358 2517108260
359 2517888577
360 2517890750
361 2524443336
362 2524463734
363 2524535110
364 2617353377
365 2671119757
366 2723843924
367 2745074985
368 2793067397
369 2805922013
370 2805922314
371 2805922469
372 2818243702
373 2824601224
374 2824609607
375 2824618351
376 2824626940
377 2824635390
378 2824644229
379 2824653811
380 2824662718
381 2824679686
382 2824704826
383 2824714901
384 2824724035
385 2824733234
386 2824747442
387 2824754829
388 2824764579
389 2824779611
390 2838124947
391 2838129798
392 2841957649
393 2841963843
394 2841965176
395 2841974169
396 2841976694
397 2841986171
398 2842045698
399 2842053521
400 2847933504
401 2847940407
402 2874595061
403 2874613736
404 2874622102
405 2876765218
406 2876767308
407 2876774579
408 2876812687
409 2876823317
410 2879079148
411 2879088884
412 2879100796
413 2879114019
414 2881666801
415 2885372436
416 2885381798
417 2885383489
418 2888380691
419 2888386686
420 2903754580
421 2903769369
422 2904666784
423 2904692875
424 2904693633
425 2904708185
426 2904713037
427 2906614068
428 2906630899
429 2906637738
430 2906643233
431 2906644821
432 2906650745
433 2906668306
434 2908747113
435 2908758295
436 2908758597
437 2908777800
438 2922366268
439 2922386666
440 2922434555
441 2929621647
442 2929631949
443 2932793687
444 2932801099
445 2932806134
446 2933583330
447 2935613974
448 2935637591
449 2935646763
450 2935647711
451 2935652692
452 2935652773
453 2935661241
454 2935661323
455 2935674537
456 2935690670
457 2935712408
458 2935717634
459 2935727216
460 2935735986
461 2935744743
462 2935755679
463 2935781601
464 2935827223
465 2935836047
466 2935836406
467 2935843545
468 2935854500
469 2935872856
470 2935882168
471 2935882818
472 2935889048
473 2935889580
474 2935967132
475 2935983320
476 2935983434
477 2935991512
478 2935991594
479 2936000026
480 2936015529
481 2936015610
482 2936024163
483 2936024244
484 2936033415
485 2936033495
486 2936051271
487 2936051353
488 2936062551
489 2940561040
490 2941514172
491 2941522133
492 2941529871
493 2941546437
494 3005483674
495 3005490717
496 3005589874
497 8006936531
498 8006976497
499 8006992221
500 8006999387
501 8016527614
502 8016544177
503 8016548873
504 8016556172
505 8016566125
506 8016571016
507 8016575636
508 8016583522
509 8016584174
510 8016584473
511 8016595299
512 8016602197
513 8016612875
514 8016613178
515 8016617030
516 8019530446
517 8019532525
518 8019562126
519 8019572192
520 8019585719
521 8019593657
522 8019597768
523 8019610617
524 8019621159
525 8019629084
526 8019629380
527 8019632208
528 8019648601
529 8019654320
530 8019659491
531 8019660127
532 8019668995
533 8019669551
534 8019678524
535 8019686523
536 8055744152
537 8056679997
538 8056684685

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

27

371

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7k0m-assembly1.cif.gz_A human serine palmitoyltransferase complex sptlc1/spltc2/ssspta/ormdl3, class 1 0.8617 28 364
7u7h-assembly2.cif.gz_F-2 cysteate acyl-acp transferase from alistipes finegoldii 0.8609 22 368
3wy7-assembly2.cif.gz_C crystal structure of mycobacterium smegmatis 7-keto-8-aminopelargonic acid (kapa) synthase biof 0.8586 29 364
6m4n-assembly1.cif.gz_E cryo-em structure of the dimeric spt-ormdl3 complex 0.8578 28 366
7yjo-assembly1.cif.gz_B cryo-em structure of the monomeric atspt-orm1 (lcb2a-deltan5) complex 0.8534 21 366
ID Description Score Start End Superfamily
af_I1JW06_395_456_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9208 300 360 3.90.1150.10
af_A0A1D6K8N8_1_138_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9081 93 207 3.40.640.10
3a2bA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9074 276 364 3.90.1150.10
af_I1JW06_395_456_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8936 300 360 3.90.1150.10
af_O94069_405_493_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8846 275 359 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A529LDD1-F1-model_v4 8-amino-7-oxononanoate synthase 0.9324 97 364 GO:0008710
GO:0009102
GO:0030170
AF-A0A434TDX0-F1-model_v4 8-amino-7-oxononanoate synthase 0.9129 270 364
AF-A0A529LDD1-F1-model_v4 8-amino-7-oxononanoate synthase 0.9097 97 364 GO:0008710
GO:0009102
GO:0030170
AF-A0A524I095-F1-model_v4 8-amino-7-oxononanoate synthase 0.9059 77 364 GO:0008710
GO:0009102
GO:0030170
AF-A0A6P0T2T6-F1-model_v4 Putative 8-amino-7-oxononanoate synthase (EC 2.3.1.47) (7-keto-8-amino-pelargonic acid synthase) (8-amino-7-ketopelargonate synthase) 0.9022 78 364 GO:0008710
GO:0009102
GO:0030170

Map