F376841

General Info

Members Datasets Scaffolds Average Seq Length
270 152 256 1198

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10006106|Ga0081539_100061064
Length 1251
Sequence LHAEVVASYRFPVTGNLQLVTGNLHAMRFSHLHVHTQYSLLDGAASIESLYKKAAKNNMPALAITDHGNMFGVFEFVKQAWNNTKVVGKTADGKDIVEPVIKPIVGCEFYVVEDRFRKTFSKEQKDERYHQVLLAKNKKGYENLVKLTSLGFIEGMYSKYPRIDKKLIEQYHEGLIATTCCIGAYVPQTILHKGEEAAEREFKWWFDMFGEDYYIELQRHNIREQEIINQTLLKFAKKYNVPVIATNDSHYTERDDYNAHDILLCINTGEKQSTPGFDDFVNDDVVIKNRRFKFPNDQFYFKTPEEMSQLFDDVPESLDNTNAIVDKVEVLNLKKDILLPAFPVPKEFITSDDSNLNQWNYLHYLTYEGARERYGEITEEVRERLDFELFTIKTMGFAGYFLIVSDFIKAGRQLGVFVGPGRGSAAGSVVAYCIGITNIDPIKYNLLFERFLNPDRKSMPDIDTDFDDEGRQKVIDYVVDKYGKNQVAQIITYGTMAAKMSIKDVARVMDLPLPESNALAKMVPERPGTDLGRVLTAPLSTRDAKEGEKSLEDKEGYGGEELENIKRLREIYHGNDIRAQVLKEAERLEGSVRNTGIHAAGIIIAPKDLTELIPVATAKDSDLWVTQIEGSVIEEAGVLKMDFLGLKTLSILKTALELIKQNHNIDIDLDALPLDDEKTFQLYQRGETNGTFQFESVGMQKYLRELKPDKFDDLIAMNALYRPGPMAYIPNYVLRKHGREEIVYDIEDMKEYLEDTYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKDRKTLDKMKGRFIEGATAKGYNKDTLEKVWTDWEAFAQYAFNKSHSTCYALVAYQTGYLKAHYPSEYMAAVLNHAGSIEKITFFMEECKRMGLKVLGPDINESLKGFAVNKKGEIRFGLGGLKGVGEAAIESIILERNKGGHYKDIFDFIKRVNQRTVNKKSIESLAYSGAFDCFKDIHRAQYFYMPNNDTMNGIERIIRFGNVYQTNKQQSTNSLFGDSVMPEIATPKLPACEEWTLTEKLEHEKDVTGMFMSGHPLDHFKFELKYYGIMQLSEFNEVKESTTLITANASRNFRIAGLVVDAQHRVTKTGRNFGALTIEDFSGKTELMLWSDDYVRFQNYLEKGKNLLINGFFKQRYNSDQFEFKVTNISLLEMAKQTLTRQLEINIEPASVTKDFVTFIEKNIRENPGKSSLRFNVYEPTENLKVTLYTLEKGFTMNDEMAGYLMDNPDVEVSVGLVG

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2818991444 Filimonas endophytica 3197 Isolate Unclassified
4 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
5 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
6 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
7 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
8 2914759650 Rhizosphaericola mali Isolate Rhizosphere
9 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
10 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
11 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
12 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
13 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
14 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
15 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
16 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
17 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
24 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
73 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
74 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
75 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
103 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
104 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
105 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
111 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
126 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
127 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
128 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
129 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
130 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
131 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
132 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
133 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
134 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
137 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
142 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
148 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
149 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
150 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
151 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.81
Metatranscriptomes 0
Isolates 5.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.93
Nodule 0
Rhizoplane 0.37
Rhizosphere 85.56
Stem 0
Stem Tuber 0
Unclassified 8.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000013 3300002067 Bacteria 208663
2 JGI25162J39368_1000107 3300002737 Bacteria 90782
3 JGI25162J39368_1001641 3300002737 Bacteria 11144
4 JGI25165J46597_1000856 3300003214 Bacteria 22020
5 rootH2_10001030 3300003320 Bacteria 61110
6 rootH1_10003042 3300003323 Bacteria 26366
7 Ga0070658_10000014 3300005327 Bacteria 244978
8 Ga0070658_10002849 3300005327 Bacteria 14369
9 Ga0070676_10000091 3300005328 Bacteria 31424
10 Ga0070676_10000886 3300005328 Bacteria 14771
11 Ga0070682_100007065 3300005337 Bacteria 6319
12 Ga0068868_100000075 3300005338 Bacteria 58452
13 Ga0070691_10009245 3300005341 Bacteria 4504
14 Ga0070668_100004274 3300005347 Bacteria 10598
15 Ga0070673_100002069 3300005364 Bacteria 12097
16 Ga0070659_100000242 3300005366 Bacteria 42847
17 Ga0070667_100000086 3300005367 Bacteria 114861
18 Ga0070667_100011497 3300005367 Bacteria 7319
19 Ga0070678_100004468 3300005456 Bacteria 7933
20 Ga0070662_100000014 3300005457 Bacteria 110124
21 Ga0070662_100003424 3300005457 Bacteria 9893
22 Ga0070679_100007943 3300005530 Bacteria 9957
23 Ga0068853_100011176 3300005539 Bacteria 7283
24 Ga0070672_100000758 3300005543 Bacteria 19232
25 Ga0070672_100024246 3300005543 Bacteria 4480
26 Ga0070665_100000032 3300005548 Bacteria 333352
27 Ga0070665_100000074 3300005548 Bacteria 192944
28 Ga0068855_100000033 3300005563 Bacteria 167299
29 Ga0068855_100000248 3300005563 Bacteria 67971
30 Ga0068855_100000370 3300005563 Bacteria 55660
31 Ga0068855_100030207 3300005563 Bacteria 6482
32 Ga0068855_100057658 3300005563 Bacteria 4552
33 Ga0070664_100017050 3300005564 Bacteria 5963
34 Ga0068857_100003696 3300005577 Bacteria 12836
35 Ga0068854_100002905 3300005578 Bacteria 10639
36 Ga0068856_100000014 3300005614 Bacteria 163480
37 Ga0068856_100011745 3300005614 Bacteria 8493
38 Ga0068856_100016982 3300005614 Bacteria 7055
39 Ga0068852_100000340 3300005616 Bacteria 31671
40 Ga0068852_100001199 3300005616 Bacteria 17214
41 Ga0068852_100002391 3300005616 Bacteria 12933
42 Ga0068859_100000030 3300005617 Bacteria 175435
43 Ga0068864_100001541 3300005618 Bacteria 18983
44 Ga0068858_100001413 3300005842 Bacteria 24658
45 Ga0068858_100014348 3300005842 Bacteria 7470
46 Ga0068860_100000034 3300005843 Bacteria 243128
47 Ga0068860_100000700 3300005843 Bacteria 38538
48 Ga0068860_100006783 3300005843 Bacteria 11477
49 Ga0068860_100007009 3300005843 Bacteria 11292
50 Ga0068860_100009650 3300005843 Bacteria 9590
51 Ga0068862_100007183 3300005844 Bacteria 9249
52 Ga0081539_10006106 3300005985 Bacteria 11752
53 Ga0075366_10000063 3300006195 Bacteria 39802
54 Ga0097621_100002334 3300006237 Bacteria 13002
55 Ga0068871_100000306 3300006358 Bacteria 34178
56 Ga0068865_100000271 3300006881 Bacteria 28407
57 Ga0068865_100000413 3300006881 Bacteria 23842
58 Ga0097620_100000030 3300006931 Bacteria 175435
59 Ga0105240_10000073 3300009093 Bacteria 201032
60 Ga0105240_10000102 3300009093 Bacteria 174846
61 Ga0105240_10000173 3300009093 Bacteria 131281
62 Ga0105240_10000448 3300009093 Bacteria 75837
63 Ga0105240_10004575 3300009093 Bacteria 20976
64 Ga0105240_10007904 3300009093 Bacteria 15339
65 Ga0105240_10009678 3300009093 Bacteria 13622
66 Ga0105240_10012390 3300009093 Bacteria 11776
67 Ga0105240_10016230 3300009093 Bacteria 10093
68 Ga0114129_10029656 3300009147 Bacteria 7748
69 Ga0105241_10000168 3300009174 Bacteria 48099
70 Ga0105241_10001745 3300009174 Bacteria 16501
71 Ga0105241_10004010 3300009174 Bacteria 10886
72 Ga0105237_10000137 3300009545 Bacteria 102639
73 Ga0105237_10000972 3300009545 Bacteria 38509
74 Ga0105237_10001711 3300009545 Bacteria 28390
75 Ga0105237_10001813 3300009545 Bacteria 27545
76 Ga0105237_10001995 3300009545 Bacteria 25967
77 Ga0105237_10003822 3300009545 Bacteria 17701
78 Ga0105237_10006231 3300009545 Bacteria 13289
79 Ga0105237_10025076 3300009545 Bacteria 6099
80 Ga0105237_10034242 3300009545 Bacteria 5144
81 Ga0105237_10043777 3300009545 Bacteria 4508
82 Ga0105238_10050627 3300009551 Bacteria 4181
83 Ga0105249_10006730 3300009553 Bacteria 10012
84 Ga0105239_10000001 3300010375 Bacteria 617353
85 Ga0105239_10000017 3300010375 Bacteria 290760
86 Ga0105239_10000079 3300010375 Bacteria 135513
87 Ga0105239_10000703 3300010375 Bacteria 47494
88 Ga0105239_10002397 3300010375 Bacteria 23901
89 Ga0105239_10013881 3300010375 Bacteria 8940
90 Ga0157373_10004162 3300013100 Bacteria 10908
91 Ga0157371_10001485 3300013102 Bacteria 24261
92 Ga0157370_10005896 3300013104 Bacteria 13655
93 Ga0157369_10002608 3300013105 Bacteria 21566
94 Ga0157369_10014510 3300013105 Bacteria 8889
95 Ga0157374_10000003 3300013296 Bacteria 854471
96 Ga0157374_10000365 3300013296 Bacteria 41708
97 Ga0157374_10001060 3300013296 Bacteria 23873
98 Ga0157374_10002336 3300013296 Bacteria 16023
99 Ga0157374_10044396 3300013296 Bacteria 4109
100 Ga0157378_10017374 3300013297 Bacteria 6313
101 Ga0163162_10000268 3300013306 Bacteria 47360
102 Ga0163162_10000377 3300013306 Bacteria 40533
103 Ga0163162_10000524 3300013306 Bacteria 35554
104 Ga0163162_10007374 3300013306 Bacteria 10695
105 Ga0163162_10045757 3300013306 Bacteria 4385
106 Ga0157372_10000173 3300013307 Bacteria 71416
107 Ga0157372_10000298 3300013307 Bacteria 55298
108 Ga0157372_10000687 3300013307 Bacteria 37115
109 Ga0157372_10002033 3300013307 Bacteria 22002
110 Ga0157372_10011324 3300013307 Bacteria 9484
111 Ga0157372_10028401 3300013307 Bacteria 6104
112 Ga0157375_10000989 3300013308 Bacteria 24572
113 Ga0157375_10002043 3300013308 Bacteria 17408
114 Ga0157375_10020738 3300013308 Bacteria 6012
115 Ga0157380_10000006 3300014326 Bacteria 160491
116 Ga0157379_10000440 3300014968 Bacteria 33697
117 Ga0157376_10000381 3300014969 Bacteria 28821
118 Ga0157376_10001047 3300014969 Bacteria 18123
119 Ga0157376_10012821 3300014969 Bacteria 6234
120 Ga0213876_10001693 3300021384 Bacteria 13411
121 Ga0209437_100093 3300025233 Bacteria 239733
122 Ga0209026_1000219 3300025250 Bacteria 78822
123 Ga0209233_1000089 3300025261 Bacteria 316381
124 Ga0207426_1000032 3300025302 Bacteria 457997
125 Ga0207647_10000142 3300025904 Bacteria 57329
126 Ga0207647_10000366 3300025904 Bacteria 36781
127 Ga0207645_10000355 3300025907 Bacteria 37914
128 Ga0207645_10000591 3300025907 Bacteria 30054
129 Ga0207705_10000107 3300025909 Bacteria 94984
130 Ga0207705_10006475 3300025909 Bacteria 8672
131 Ga0207654_10003241 3300025911 Bacteria 8215
132 Ga0207654_10009980 3300025911 Bacteria 4829
133 Ga0207695_10000021 3300025913 Bacteria 679399
134 Ga0207695_10000039 3300025913 Bacteria 454801
135 Ga0207695_10000053 3300025913 Bacteria 396740
136 Ga0207695_10000073 3300025913 Bacteria 312565
137 Ga0207695_10000109 3300025913 Bacteria 251757
138 Ga0207695_10000151 3300025913 Bacteria 206493
139 Ga0207695_10000990 3300025913 Bacteria 50315
140 Ga0207695_10003277 3300025913 Bacteria 23008
141 Ga0207695_10015006 3300025913 Bacteria 9140
142 Ga0207695_10015711 3300025913 Bacteria 8900
143 Ga0207671_10000424 3300025914 Bacteria 58429
144 Ga0207671_10000842 3300025914 Bacteria 38914
145 Ga0207671_10001009 3300025914 Bacteria 34436
146 Ga0207671_10004137 3300025914 Bacteria 14030
147 Ga0207671_10006307 3300025914 Bacteria 10592
148 Ga0207671_10015711 3300025914 Bacteria 5917
149 Ga0207671_10018102 3300025914 Bacteria 5413
150 Ga0207662_10008886 3300025918 Bacteria 5512
151 Ga0207687_10020354 3300025927 Bacteria 4400
152 Ga0207690_10000272 3300025932 Bacteria 36902
153 Ga0207706_10000057 3300025933 Bacteria 112805
154 Ga0207706_10006509 3300025933 Bacteria 10836
155 Ga0207706_10011553 3300025933 Bacteria 8041
156 Ga0207704_10000052 3300025938 Bacteria 80866
157 Ga0207704_10001546 3300025938 Bacteria 10329
158 Ga0207691_10000037 3300025940 Bacteria 108385
159 Ga0207691_10012428 3300025940 Bacteria 8163
160 Ga0207689_10000829 3300025942 Bacteria 29817
161 Ga0207667_10000046 3300025949 Bacteria 245420
162 Ga0207667_10002679 3300025949 Bacteria 22020
163 Ga0207667_10011097 3300025949 Bacteria 10489
164 Ga0207668_10003457 3300025972 Bacteria 9270
165 Ga0207640_10014884 3300025981 Bacteria 4488
166 Ga0207658_10000629 3300025986 Bacteria 31155
167 Ga0207703_10012635 3300026035 Bacteria 6584
168 Ga0207702_10000036 3300026078 Bacteria 154106
169 Ga0207702_10016583 3300026078 Bacteria 6096
170 Ga0207641_10000061 3300026088 Bacteria 160161
171 Ga0207648_10001276 3300026089 Bacteria 28144
172 Ga0207674_10007237 3300026116 Bacteria 12949
173 Ga0207683_10023014 3300026121 Bacteria 5355
174 Ga0207683_10029003 3300026121 Bacteria 4790
175 Ga0207698_10006158 3300026142 Bacteria 7470
176 Ga0268266_10000010 3300028379 Bacteria 1030233
177 Ga0268266_10000030 3300028379 Bacteria 417120
178 Ga0268264_10000052 3300028381 Bacteria 321218
179 Ga0268264_10006422 3300028381 Bacteria 9902
180 Ga0307515_10000057 3300028794 Bacteria 261695
181 Ga0307515_10000290 3300028794 Bacteria 123604
182 Ga0307515_10001837 3300028794 Bacteria 47323
183 Ga0307511_10001394 3300030521 Bacteria 25494
184 Ga0265327_10000146 3300031251 Bacteria 154436
185 Ga0265327_10012945 3300031251 Bacteria 5583
186 Ga0307408_100000934 3300031548 Bacteria 22734
187 Ga0307408_100009279 3300031548 Bacteria 6486
188 Ga0307408_100011015 3300031548 Bacteria 5966
189 Ga0307508_10000784 3300031616 Bacteria 37429
190 Ga0307516_10001143 3300031730 Bacteria 37055
191 Ga0307405_10000878 3300031731 Bacteria 11895
192 Ga0307412_10000698 3300031911 Bacteria 19359
193 Ga0307412_10009073 3300031911 Bacteria 5699
194 Ga0307507_10000032 3300033179 Bacteria 194155
195 Ga0307510_10000449 3300033180 Bacteria 40041
196 Ga0395899_0000002 3300037312 Bacteria 1324310
197 Ga0395899_0000840 3300037312 Bacteria 29647
198 Ga0395899_0002241 3300037312 Bacteria 15831
199 Ga0395900_0000143 3300037418 Bacteria 120234
200 Ga0395900_0000284 3300037418 Bacteria 75852
201 Ga0395898_0006682 3300037466 Bacteria 12298
202 Ga0395905_0000003 3300037471 Bacteria 1347396
203 Ga0395905_0000045 3300037471 Bacteria 241370
204 Ga0395905_0007241 3300037471 Bacteria 11054
205 Ga0395901_0000925 3300038443 Bacteria 31947
206 Ga0395901_0016820 3300038443 Bacteria 7454
207 Ga0400483_137220 3300039062 Bacteria 17202
208 Ga0400483_151114 3300039062 Bacteria 17413
209 Ga0436365_1528891 3300039437 Bacteria 35712
210 Ga0439457_002515 3300042014 Bacteria 5221
211 Ga0466972_0000023 3300044658 Bacteria 192679
212 Ga0466972_0000035 3300044658 Bacteria 147516
213 Ga0466972_0002983 3300044658 Bacteria 8376
214 Ga0466966_0000028 3300044684 Bacteria 105667
215 Ga0453684_0005429 3300044712 Bacteria 25255
216 Ga0466957_0000082 3300044842 Bacteria 38374
217 Ga0466957_0009677 3300044842 Bacteria 5503
218 Ga0466959_0000047 3300045049 Bacteria 86901
219 Ga0466959_0004410 3300045049 Bacteria 9419
220 Ga0451576_0000015 3300045051 Bacteria 579908
221 Ga0495650_0000162 3300046471 Bacteria 148927
222 Ga0495585_0000240 3300046492 Bacteria 56802
223 Ga0495585_0000262 3300046492 Bacteria 53542
224 Ga0495606_0000033 3300046507 Bacteria 247739
225 Ga0495610_0001899 3300046512 Bacteria 18039
226 Ga0495616_0002307 3300046513 Bacteria 12758
227 Ga0495609_0003705 3300046538 Bacteria 8636
228 Ga0495633_0000067 3300046558 Bacteria 139122
229 Ga0495668_0000009 3300046616 Bacteria 492623
230 Ga0495611_0001055 3300046648 Bacteria 14574
231 Ga0495625_0000131 3300046660 Bacteria 117738
232 Ga0495625_0003822 3300046660 Bacteria 14570
233 Ga0495625_0016928 3300046660 Bacteria 5720
234 Ga0495661_0001482 3300046665 Bacteria 19585
235 Ga0495649_0000009 3300046694 Bacteria 451725
236 Ga0495687_000039 3300047443 Bacteria 245077
237 Ga0495687_008065 3300047443 Bacteria 6085
238 Ga0495687_016251 3300047443 Bacteria 3747
239 Ga0495686_0000046 3300047472 Bacteria 281963
240 Ga0495686_0000994 3300047472 Bacteria 34556
241 Ga0501040_0001685 3300049576 Bacteria 14158
242 Ga0501223_002240 3300049663 Bacteria 4327
243 Ga0501225_0000372 3300049705 Bacteria 14119
244 Ga0501044_0012567 3300049823 Bacteria 9169
245 nmdc:mga0k408_76_c2 3300050493 Bacteria 45945
246 nmdc:mga05p37_37473_c1 3300050507 Bacteria 5945
247 nmdc:mga05p37_9274_c1 3300050507 Bacteria 11636
248 nmdc:mga0n895_10397_c1 3300050512 Bacteria 8218
249 Ga0500635_0000693 3300053080 Bacteria 8525
250 Ga0500635_0000937 3300053080 Bacteria 7041
251 Ga0500578_0002458 3300053086 Bacteria 15375
252 Ga0500583_0000080 3300053092 Bacteria 55700
253 Ga0500562_000017 3300053108 Bacteria 130556
254 Ga0500618_000029 3300053125 Bacteria 131691
255 Ga0500622_0000303 3300053156 Bacteria 50358
256 Ga0500622_0001199 3300053156 Bacteria 21329

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049705 Ga0501225_0000372 Ga0501225_0000372_1122_4280 1019
2 3300049663 Ga0501223_002240 Ga0501223_002240_930_4169 1078
3 3300049576 Ga0501040_0001685 Ga0501040_0001685_206_3682 1118
4 3300050512 nmdc:mga0n895_10397_c1 nmdc:mga0n895_10397_c1_3932_7414 1118
5 3300009093 Ga0105240_10000073 Ga0105240_10000073152 1128
6 3300025913 Ga0207695_10000151 Ga0207695_10000151160 1128
7 3300049823 Ga0501044_0012567 Ga0501044_0012567_754_4290 1128
8 3300005543 Ga0070672_100024246 Ga0070672_1000242462 1130
9 3300025918 Ga0207662_10008886 Ga0207662_100088861 1130
10 3300025940 Ga0207691_10012428 Ga0207691_100124284 1130
11 3300039062 Ga0400483_137220 Ga0400483_137220_10578_14063 1132
12 3300039062 Ga0400483_151114 Ga0400483_151114_12113_15598 1132
13 3300009093 Ga0105240_10000102 Ga0105240_10000102104 1134
14 3300025913 Ga0207695_10000109 Ga0207695_10000109159 1134
15 3300005367 Ga0070667_100011497 Ga0070667_1000114973 1139
16 3300005616 Ga0068852_100001199 Ga0068852_1000011992 1139
17 3300005617 Ga0068859_100000030 Ga0068859_100000030144 1139
18 3300005842 Ga0068858_100014348 Ga0068858_1000143486 1139
19 3300005843 Ga0068860_100007009 Ga0068860_1000070098 1139
20 3300006931 Ga0097620_100000030 Ga0097620_1000000303 1139
21 3300009174 Ga0105241_10004010 Ga0105241_100040107 1139
22 3300013306 Ga0163162_10000268 Ga0163162_1000026818 1139
23 3300013308 Ga0157375_10020738 Ga0157375_100207383 1139
24 3300014969 Ga0157376_10012821 Ga0157376_100128215 1139
25 3300025911 Ga0207654_10003241 Ga0207654_100032413 1139
26 3300025914 Ga0207671_10000842 Ga0207671_1000084210 1139
27 3300025942 Ga0207689_10000829 Ga0207689_100008294 1139
28 3300026088 Ga0207641_10000061 Ga0207641_1000006172 1139
29 3300005577 Ga0068857_100003696 Ga0068857_1000036966 1140
30 3300005578 Ga0068854_100002905 Ga0068854_1000029054 1140
31 3300005616 Ga0068852_100002391 Ga0068852_1000023915 1140
32 3300005843 Ga0068860_100000700 Ga0068860_10000070017 1140
33 3300025949 Ga0207667_10011097 Ga0207667_100110974 1140
34 3300025981 Ga0207640_10014884 Ga0207640_100148843 1140
35 3300026116 Ga0207674_10007237 Ga0207674_100072374 1140
36 3300026142 Ga0207698_10006158 Ga0207698_100061585 1140
37 3300028381 Ga0268264_10006422 Ga0268264_100064225 1140
38 3300044658 Ga0466972_0002983 Ga0466972_0002983_50_3586 1140
39 3300050507 nmdc:mga05p37_9274_c1 nmdc:mga05p37_9274_c1_4729_8271 1140
40 iso_pu_bacteria 2839989709 2839989957 1148
41 iso_pu_bacteria 2910245624 2910246756 1148
42 3300038443 Ga0395901_0016820 Ga0395901_0016820_976_4467 1151
43 3300045051 Ga0451576_0000015 Ga0451576_0000015_115918_119523 1151
44 3300044712 Ga0453684_0005429 Ga0453684_0005429_18083_21763 1156
45 3300010375 Ga0105239_10000001 Ga0105239_10000001316 1160
46 3300013296 Ga0157374_10000003 Ga0157374_10000003714 1160
47 3300014969 Ga0157376_10001047 Ga0157376_100010477 1160
48 3300031730 Ga0307516_10001143 Ga0307516_1000114326 1160
49 3300044658 Ga0466972_0000035 Ga0466972_0000035_117791_121462 1160
50 3300009093 Ga0105240_10016230 Ga0105240_100162303 1162
51 3300010375 Ga0105239_10000017 Ga0105239_1000001712 1162
52 3300013297 Ga0157378_10017374 Ga0157378_100173741 1162
53 3300014326 Ga0157380_10000006 Ga0157380_10000006144 1162
54 3300053156 Ga0500622_0001199 Ga0500622_0001199_15062_18730 1162
55 3300009147 Ga0114129_10029656 Ga0114129_100296563 1163
56 3300031251 Ga0265327_10000146 Ga0265327_1000014697 1163
57 3300037471 Ga0395905_0000003 Ga0395905_0000003_488659_492249 1163
58 3300050507 nmdc:mga05p37_37473_c1 nmdc:mga05p37_37473_c1_1449_5105 1163
59 3300013307 Ga0157372_10000687 Ga0157372_1000068727 1164
60 3300005614 Ga0068856_100016982 Ga0068856_1000169825 1165
61 3300026078 Ga0207702_10016583 Ga0207702_100165832 1165
62 3300005563 Ga0068855_100057658 Ga0068855_1000576582 1166
63 3300005843 Ga0068860_100009650 Ga0068860_1000096505 1166
64 3300005844 Ga0068862_100007183 Ga0068862_1000071839 1166
65 3300028794 Ga0307515_10000057 Ga0307515_1000005715 1166
66 3300031616 Ga0307508_10000784 Ga0307508_1000078420 1167
67 iso_pu_bacteria 2738541278 2738727704 1169
68 iso_pu_bacteria 2914759650 2914762607 1169
69 iso_pu_bacteria 2929154850 2929157352 1169
70 3300009545 Ga0105237_10043777 Ga0105237_100437772 1171
71 3300010375 Ga0105239_10013881 Ga0105239_100138812 1171
72 3300025302 Ga0207426_1000032 Ga0207426_1000032218 1171
73 3300037471 Ga0395905_0007241 Ga0395905_0007241_607_4242 1171
74 3300005337 Ga0070682_100007065 Ga0070682_1000070654 1172
75 3300005563 Ga0068855_100000370 Ga0068855_10000037014 1172
76 3300005564 Ga0070664_100017050 Ga0070664_1000170503 1172
77 3300009093 Ga0105240_10000448 Ga0105240_1000044840 1172
78 3300013100 Ga0157373_10004162 Ga0157373_100041627 1172
79 3300013307 Ga0157372_10028401 Ga0157372_100284014 1172
80 3300025913 Ga0207695_10000073 Ga0207695_10000073167 1172
81 3300025933 Ga0207706_10006509 Ga0207706_100065097 1172
82 3300025949 Ga0207667_10002679 Ga0207667_1000267919 1172
83 3300005327 Ga0070658_10002849 Ga0070658_100028494 1173
84 3300005328 Ga0070676_10000091 Ga0070676_1000009125 1173
85 3300005338 Ga0068868_100000075 Ga0068868_10000007524 1173
86 3300005341 Ga0070691_10009245 Ga0070691_100092452 1173
87 3300005347 Ga0070668_100004274 Ga0070668_1000042749 1173
88 3300005364 Ga0070673_100002069 Ga0070673_1000020698 1173
89 3300005367 Ga0070667_100000086 Ga0070667_100000086101 1173
90 3300005457 Ga0070662_100003424 Ga0070662_1000034247 1173
91 3300005539 Ga0068853_100011176 Ga0068853_1000111764 1173
92 3300005543 Ga0070672_100000758 Ga0070672_10000075810 1173
93 3300005548 Ga0070665_100000074 Ga0070665_10000007435 1173
94 3300005563 Ga0068855_100030207 Ga0068855_1000302074 1173
95 3300005614 Ga0068856_100011745 Ga0068856_1000117454 1173
96 3300005618 Ga0068864_100001541 Ga0068864_10000154113 1173
97 3300005842 Ga0068858_100001413 Ga0068858_1000014138 1173
98 3300005843 Ga0068860_100000034 Ga0068860_100000034178 1173
99 3300005843 Ga0068860_100006783 Ga0068860_1000067834 1173
100 3300006881 Ga0068865_100000413 Ga0068865_10000041310 1173
101 3300009093 Ga0105240_10007904 Ga0105240_100079042 1173
102 3300009093 Ga0105240_10009678 Ga0105240_1000967811 1173
103 3300009174 Ga0105241_10001745 Ga0105241_100017455 1173
104 3300009545 Ga0105237_10000137 Ga0105237_1000013724 1173
105 3300009545 Ga0105237_10001813 Ga0105237_100018137 1173
106 3300009545 Ga0105237_10003822 Ga0105237_100038224 1173
107 3300009545 Ga0105237_10006231 Ga0105237_100062314 1173
108 3300009545 Ga0105237_10025076 Ga0105237_100250762 1173
109 3300009553 Ga0105249_10006730 Ga0105249_100067308 1173
110 3300010375 Ga0105239_10000079 Ga0105239_1000007946 1173
111 3300010375 Ga0105239_10002397 Ga0105239_1000239712 1173
112 3300013104 Ga0157370_10005896 Ga0157370_100058964 1173
113 3300013296 Ga0157374_10002336 Ga0157374_100023369 1173
114 3300013296 Ga0157374_10044396 Ga0157374_100443962 1173
115 3300013306 Ga0163162_10000377 Ga0163162_1000037721 1173
116 3300013306 Ga0163162_10000524 Ga0163162_1000052427 1173
117 3300013306 Ga0163162_10007374 Ga0163162_100073748 1173
118 3300013307 Ga0157372_10002033 Ga0157372_100020339 1173
119 3300013308 Ga0157375_10000989 Ga0157375_1000098910 1173
120 3300014968 Ga0157379_10000440 Ga0157379_1000044020 1173
121 3300014969 Ga0157376_10000381 Ga0157376_1000038121 1173
122 3300021384 Ga0213876_10001693 Ga0213876_100016932 1173
123 3300025907 Ga0207645_10000355 Ga0207645_1000035529 1173
124 3300025909 Ga0207705_10006475 Ga0207705_100064756 1173
125 3300025913 Ga0207695_10000021 Ga0207695_10000021402 1173
126 3300025913 Ga0207695_10000039 Ga0207695_10000039100 1173
127 3300025913 Ga0207695_10000990 Ga0207695_1000099039 1173
128 3300025913 Ga0207695_10003277 Ga0207695_100032774 1173
129 3300025913 Ga0207695_10015006 Ga0207695_100150063 1173
130 3300025914 Ga0207671_10000424 Ga0207671_1000042424 1173
131 3300025914 Ga0207671_10004137 Ga0207671_100041377 1173
132 3300025914 Ga0207671_10015711 Ga0207671_100157113 1173
133 3300025914 Ga0207671_10018102 Ga0207671_100181022 1173
134 3300025927 Ga0207687_10020354 Ga0207687_100203543 1173
135 3300025933 Ga0207706_10011553 Ga0207706_100115535 1173
136 3300025938 Ga0207704_10001546 Ga0207704_100015466 1173
137 3300025940 Ga0207691_10000037 Ga0207691_1000003772 1173
138 3300025972 Ga0207668_10003457 Ga0207668_100034573 1173
139 3300025986 Ga0207658_10000629 Ga0207658_1000062922 1173
140 3300026035 Ga0207703_10012635 Ga0207703_100126351 1173
141 3300026089 Ga0207648_10001276 Ga0207648_1000127623 1173
142 3300026121 Ga0207683_10023014 Ga0207683_100230143 1173
143 3300028379 Ga0268266_10000010 Ga0268266_10000010658 1173
144 3300028381 Ga0268264_10000052 Ga0268264_10000052128 1173
145 3300030521 Ga0307511_10001394 Ga0307511_100013944 1173
146 3300031251 Ga0265327_10012945 Ga0265327_100129454 1173
147 3300033180 Ga0307510_10000449 Ga0307510_100004497 1173
148 3300042014 Ga0439457_002515 Ga0439457_002515_476_4117 1173
149 3300044658 Ga0466972_0000023 Ga0466972_0000023_143274_146915 1173
150 3300044684 Ga0466966_0000028 Ga0466966_0000028_64518_68159 1173
151 3300044842 Ga0466957_0000082 Ga0466957_0000082_20307_23948 1173
152 3300044842 Ga0466957_0009677 Ga0466957_0009677_243_3884 1173
153 3300045049 Ga0466959_0000047 Ga0466959_0000047_29870_33511 1173
154 3300045049 Ga0466959_0004410 Ga0466959_0004410_4020_7658 1173
155 3300046648 Ga0495611_0001055 Ga0495611_0001055_8956_12594 1173
156 3300047443 Ga0495687_000039 Ga0495687_000039_171399_175034 1173
157 3300047472 Ga0495686_0000046 Ga0495686_0000046_159481_163119 1173
158 3300053086 Ga0500578_0002458 Ga0500578_0002458_7779_11420 1173
159 3300053092 Ga0500583_0000080 Ga0500583_0000080_36796_40437 1173
160 3300053108 Ga0500562_000017 Ga0500562_000017_26708_30376 1173
161 iso_pu_bacteria 2818991444 2819588848 1173
162 3300005985 Ga0081539_10006106 Ga0081539_100061064 1174
163 3300039437 Ga0436365_1528891 Ga0436365_1528891_12042_15716 1174
164 3300005530 Ga0070679_100007943 Ga0070679_1000079435 1183
165 3300025250 Ga0209026_1000219 Ga0209026_100021921 1183
166 3300037312 Ga0395899_0002241 Ga0395899_0002241_7141_10725 1183
167 3300037418 Ga0395900_0000143 Ga0395900_0000143_34555_38139 1183
168 3300037466 Ga0395898_0006682 Ga0395898_0006682_3360_6944 1183
169 3300037471 Ga0395905_0000045 Ga0395905_0000045_232773_236357 1183
170 3300038443 Ga0395901_0000925 Ga0395901_0000925_4546_8130 1183
171 3300013307 Ga0157372_10011324 Ga0157372_100113249 1188
172 3300031548 Ga0307408_100000934 Ga0307408_1000009348 1188
173 3300037312 Ga0395899_0000840 Ga0395899_0000840_15843_19430 1188
174 3300031548 Ga0307408_100009279 Ga0307408_1000092793 1189
175 3300031548 Ga0307408_100011015 Ga0307408_1000110153 1189
176 3300031731 Ga0307405_10000878 Ga0307405_100008784 1189
177 3300031911 Ga0307412_10000698 Ga0307412_1000069817 1189
178 3300031911 Ga0307412_10009073 Ga0307412_100090732 1189
179 iso_pu_bacteria 2599185184 2599480437 1190
180 iso_pu_bacteria 2852623160 2852625241 1190
181 iso_pu_bacteria 2884933994 2884934255 1190
182 iso_pu_bacteria 2919437846 2919438262 1190
183 iso_pu_bacteria 2928078545 2928083323 1190
184 iso_pu_bacteria 2928147474 2928151417 1190
185 iso_pu_bacteria 2932082852 2932087334 1190
186 iso_pu_bacteria 2977232053 2977233611 1190
187 3300013102 Ga0157371_10001485 Ga0157371_100014853 1192
188 3300013105 Ga0157369_10014510 Ga0157369_100145103 1192
189 3300013307 Ga0157372_10000173 Ga0157372_1000017358 1192
190 3300025904 Ga0207647_10000366 Ga0207647_1000036628 1192
191 3300053080 Ga0500635_0000693 Ga0500635_0000693_3757_7341 1192
192 3300047472 Ga0495686_0000994 Ga0495686_0000994_21771_25352 1193
193 3300053125 Ga0500618_000029 Ga0500618_000029_62571_66152 1193
194 3300002067 JGI24735J21928_10000013 JGI24735J21928_10000013179 1194
195 3300002737 JGI25162J39368_1000107 JGI25162J39368_100010726 1194
196 3300002737 JGI25162J39368_1001641 JGI25162J39368_10016418 1194
197 3300003214 JGI25165J46597_1000856 JGI25165J46597_10008568 1194
198 3300003320 rootH2_10001030 rootH2_100010303 1194
199 3300003323 rootH1_10003042 rootH1_1000304215 1194
200 3300005327 Ga0070658_10000014 Ga0070658_10000014150 1194
201 3300005328 Ga0070676_10000886 Ga0070676_100008863 1194
202 3300005366 Ga0070659_100000242 Ga0070659_1000002426 1194
203 3300005456 Ga0070678_100004468 Ga0070678_1000044687 1194
204 3300005457 Ga0070662_100000014 Ga0070662_10000001475 1194
205 3300005548 Ga0070665_100000032 Ga0070665_100000032173 1194
206 3300005563 Ga0068855_100000033 Ga0068855_10000003381 1194
207 3300005563 Ga0068855_100000248 Ga0068855_10000024839 1194
208 3300005614 Ga0068856_100000014 Ga0068856_10000001442 1194
209 3300005616 Ga0068852_100000340 Ga0068852_10000034025 1194
210 3300006195 Ga0075366_10000063 Ga0075366_1000006319 1194
211 3300006237 Ga0097621_100002334 Ga0097621_1000023342 1194
212 3300006358 Ga0068871_100000306 Ga0068871_1000003066 1194
213 3300006881 Ga0068865_100000271 Ga0068865_10000027115 1194
214 3300009093 Ga0105240_10000173 Ga0105240_1000017339 1194
215 3300009093 Ga0105240_10004575 Ga0105240_100045753 1194
216 3300009093 Ga0105240_10012390 Ga0105240_100123905 1194
217 3300009174 Ga0105241_10000168 Ga0105241_100001685 1194
218 3300009545 Ga0105237_10000972 Ga0105237_1000097210 1194
219 3300009545 Ga0105237_10001711 Ga0105237_1000171114 1194
220 3300009545 Ga0105237_10001995 Ga0105237_1000199516 1194
221 3300009545 Ga0105237_10034242 Ga0105237_100342423 1194
222 3300009551 Ga0105238_10050627 Ga0105238_100506273 1194
223 3300010375 Ga0105239_10000703 Ga0105239_1000070343 1194
224 3300013105 Ga0157369_10002608 Ga0157369_100026084 1194
225 3300013296 Ga0157374_10000365 Ga0157374_1000036528 1194
226 3300013296 Ga0157374_10001060 Ga0157374_100010603 1194
227 3300013306 Ga0163162_10045757 Ga0163162_100457572 1194
228 3300013307 Ga0157372_10000298 Ga0157372_1000029832 1194
229 3300013308 Ga0157375_10002043 Ga0157375_1000204313 1194
230 3300025233 Ga0209437_100093 Ga0209437_100093223 1194
231 3300025261 Ga0209233_1000089 Ga0209233_1000089112 1194
232 3300025904 Ga0207647_10000142 Ga0207647_1000014244 1194
233 3300025907 Ga0207645_10000591 Ga0207645_1000059125 1194
234 3300025909 Ga0207705_10000107 Ga0207705_100001077 1194
235 3300025911 Ga0207654_10009980 Ga0207654_100099802 1194
236 3300025913 Ga0207695_10000053 Ga0207695_10000053118 1194
237 3300025913 Ga0207695_10015711 Ga0207695_100157112 1194
238 3300025914 Ga0207671_10001009 Ga0207671_1000100915 1194
239 3300025914 Ga0207671_10006307 Ga0207671_100063074 1194
240 3300025932 Ga0207690_10000272 Ga0207690_1000027224 1194
241 3300025933 Ga0207706_10000057 Ga0207706_1000005761 1194
242 3300025938 Ga0207704_10000052 Ga0207704_100000526 1194
243 3300025949 Ga0207667_10000046 Ga0207667_10000046157 1194
244 3300026078 Ga0207702_10000036 Ga0207702_1000003694 1194
245 3300026121 Ga0207683_10029003 Ga0207683_100290031 1194
246 3300028379 Ga0268266_10000030 Ga0268266_10000030156 1194
247 3300028794 Ga0307515_10000290 Ga0307515_10000290102 1194
248 3300028794 Ga0307515_10001837 Ga0307515_1000183723 1194
249 3300033179 Ga0307507_10000032 Ga0307507_10000032107 1194
250 3300037312 Ga0395899_0000002 Ga0395899_0000002_76247_79837 1194
251 3300037418 Ga0395900_0000284 Ga0395900_0000284_16159_19746 1194
252 3300046471 Ga0495650_0000162 Ga0495650_0000162_74800_78384 1194
253 3300046492 Ga0495585_0000240 Ga0495585_0000240_33184_36768 1194
254 3300046492 Ga0495585_0000262 Ga0495585_0000262_18791_22375 1194
255 3300046507 Ga0495606_0000033 Ga0495606_0000033_224598_228182 1194
256 3300046512 Ga0495610_0001899 Ga0495610_0001899_5338_8922 1194
257 3300046513 Ga0495616_0002307 Ga0495616_0002307_4465_8049 1194
258 3300046538 Ga0495609_0003705 Ga0495609_0003705_2046_5630 1194
259 3300046558 Ga0495633_0000067 Ga0495633_0000067_49049_52633 1194
260 3300046616 Ga0495668_0000009 Ga0495668_0000009_177130_180714 1194
261 3300046660 Ga0495625_0000131 Ga0495625_0000131_103299_106883 1194
262 3300046660 Ga0495625_0003822 Ga0495625_0003822_10142_13726 1194
263 3300046660 Ga0495625_0016928 Ga0495625_0016928_2092_5676 1194
264 3300046665 Ga0495661_0001482 Ga0495661_0001482_6698_10288 1194
265 3300046694 Ga0495649_0000009 Ga0495649_0000009_102760_106344 1194
266 3300047443 Ga0495687_008065 Ga0495687_008065_2307_5891 1194
267 3300047443 Ga0495687_016251 Ga0495687_016251_24_3608 1194
268 3300050493 nmdc:mga0k408_76_c2 nmdc:mga0k408_76_c2_25870_29454 1194
269 3300053080 Ga0500635_0000937 Ga0500635_0000937_256_3846 1194
270 3300053156 Ga0500622_0000303 Ga0500622_0000303_1658_5245 1194

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17657

DNA_pol3_finger

Bacterial DNA polymerase III alpha subunit finger domain

648

811

0.99

PF02811

PHP

PHP domain

31

220

0.95

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

1085

1164

0.94

PF07733

DNA_pol3_alpha

Bacterial DNA polymerase III alpha NTPase domain

360

645

0.93

PF14579

HHH_6

Helix-hairpin-helix motif

883

974

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gx8-assembly1.cif.gz_A crystal structure of a dna polymerase iii alpha-epsilon chimera 0.9242 2 286
4gx9-assembly2.cif.gz_B crystal structure of a dna polymerase iii alpha-epsilon chimera 0.9221 2 286
4gx9-assembly4.cif.gz_D crystal structure of a dna polymerase iii alpha-epsilon chimera 0.9214 1 286
2hnh-assembly1.cif.gz_A crystal structure of the catalytic alpha subunit of e. coli replicative dna polymerase iii 0.8956 1 902
5lew-assembly1.cif.gz_A dna polymerase 0.8925 3 902
ID Description Score Start End Superfamily
4gx9D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9214 1 286 3.20.20.140
2hqaA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9156 1 286 3.20.20.140
4iqjC01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9121 3 286 3.20.20.140
af_P10443_433_510_1.10.10.1600 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Bacterial DNA polymerase III alpha subunit, thumb domain 0.9092 451 527 1.10.10.1600
2hqaA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.9089 1 286 3.20.20.140
ID Description Score Start End GO Terms
AF-A0A4Q3FUN7-F1-model_v4 DNA polymerase III subunit alpha (EC 2.7.7.7) 0.9742 1 532 GO:0000160
GO:0006260
GO:0008408
GO:0016779
AF-A0A538JML5-F1-model_v4 DNA polymerase III alpha subunit finger domain-containing protein 0.9733 603 757 GO:0006260
GO:0008408
AF-A0A3B8XLN9-F1-model_v4 DNA polymerase III subunit alpha 0.973 557 759 GO:0006260
GO:0008408
AF-A0A4Q3FUN7-F1-model_v4 DNA polymerase III subunit alpha (EC 2.7.7.7) 0.9724 1 532 GO:0000160
GO:0006260
GO:0008408
GO:0016779
AF-A0A3D1E4W2-F1-model_v4 DNA polymerase III subunit alpha 0.9721 559 880 GO:0006260
GO:0008408

Feature Viewer

pLDDT pTM Quality
86 0.72 High
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Predicted Structure (AlphaFold2)

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