F376922

General Info

Members Datasets Scaffolds Average Seq Length
270 171 540 322

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10186753|Ga0105239_101867533
Length 364
Sequence MLRGGLPTLSSSPELSSNDGLLAMWRCRVYLRSGALASPGARYTNARLSRYVTLARPFTLLPPLLGIVSGAVCAWGSAHNPDPARALTSSVVLTVVLGSICAAFLNAANNTLNQIYDLEIDRINKPKRPLVTGEVSIRGAWVFTWVMYALGLVPTWLVVVYPYTSWGQKLFAPLSAHECFFIYFIAFISTFVYSVPALGRTKAHPLGANVTIAIPRGCLLKVAGWTMVARATVAEPWFIGAVFMFFLLGAASTKDFSDIEGDRAGGCRTLPIVFGVRRAAWMIAPFFIFPWLLMPVGAATGVLTGNHTALTILGIGLALWGTYTVWLIVRNPDELTATENHPSWRHMYLMMMAAQIGFAVAYLI

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
81 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
120 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
123 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
124 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
125 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
130 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
131 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
132 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
135 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
136 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
137 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
138 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
139 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
140 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
141 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
142 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
143 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
167 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.44
Rhizosphere 90.37
Stem 0
Stem Tuber 0
Unclassified 2.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10186753 3300010375 Bacteria 2320
2 rootH1_10065271 3300003316 Bacteria 2834
3 rootH1_10206969 3300003323 Bacteria 2200
4 Ga0065707_10103568 3300005295 Bacteria 2741
5 Ga0065707_10132634 3300005295 Unclassified 1894
6 Ga0065707_10133539 3300005295 Bacteria 1879
7 Ga0070658_10166769 3300005327 Unclassified 1849
8 Ga0070676_10014793 3300005328 Bacteria 4293
9 Ga0070683_100000087 3300005329 Bacteria 61918
10 Ga0070683_100094557 3300005329 Bacteria 2809
11 Ga0070683_100277320 3300005329 Bacteria 1595
12 Ga0070690_100069772 3300005330 Bacteria 2281
13 Ga0070690_100363232 3300005330 Bacteria 1054
14 Ga0070670_100004548 3300005331 Bacteria 11630
15 Ga0068869_100073611 3300005334 Bacteria 2533
16 Ga0068869_100187704 3300005334 Bacteria 1624
17 Ga0068869_100303827 3300005334 Bacteria 1289
18 Ga0070666_10000298 3300005335 Bacteria 32229
19 Ga0070680_100051549 3300005336 Bacteria 3358
20 Ga0070682_100000035 3300005337 Bacteria 150016
21 Ga0068868_100001406 3300005338 Bacteria 16583
22 Ga0068868_100003715 3300005338 Bacteria 10658
23 Ga0070692_10007451 3300005345 Bacteria 4818
24 Ga0070669_100000204 3300005353 Bacteria 50400
25 Ga0070674_100020748 3300005356 Bacteria 4205
26 Ga0070673_100015243 3300005364 Bacteria 5392
27 Ga0070688_100022097 3300005365 Bacteria 3723
28 Ga0070667_100004548 3300005367 Bacteria 11672
29 Ga0070667_100154221 3300005367 Archaea 2019
30 Ga0070709_10000113 3300005434 Bacteria 55123
31 Ga0070713_100017096 3300005436 Bacteria 5474
32 Ga0070701_10000978 3300005438 Bacteria 10344
33 Ga0070701_10020375 3300005438 Bacteria 3149
34 Ga0070705_100042653 3300005440 Bacteria 2595
35 Ga0070700_100000119 3300005441 Bacteria 48741
36 Ga0070700_100026652 3300005441 Bacteria 3417
37 Ga0070708_100341518 3300005445 Bacteria 1411
38 Ga0070678_100285104 3300005456 Bacteria 1398
39 Ga0068867_100017575 3300005459 Bacteria 5078
40 Ga0070706_100063724 3300005467 Bacteria 3406
41 Ga0070707_100156093 3300005468 Bacteria 2223
42 Ga0070698_100046839 3300005471 Bacteria 4421
43 Ga0070698_100482433 3300005471 Unclassified 1177
44 Ga0070684_100000320 3300005535 Bacteria 33167
45 Ga0070672_100006809 3300005543 Bacteria 7719
46 Ga0070672_100007226 3300005543 Bacteria 7523
47 Ga0070672_100184629 3300005543 Bacteria 1739
48 Ga0070686_100009138 3300005544 Bacteria 5559
49 Ga0070686_100019243 3300005544 Bacteria 4020
50 Ga0070686_100050353 3300005544 Bacteria 2647
51 Ga0070686_100195855 3300005544 Bacteria 1445
52 Ga0070695_100017861 3300005545 Bacteria 4304
53 Ga0070696_100155204 3300005546 Bacteria 1683
54 Ga0070665_100000438 3300005548 Bacteria 60778
55 Ga0070665_100008980 3300005548 Bacteria 10125
56 Ga0070704_100017079 3300005549 Bacteria 4605
57 Ga0070664_100033789 3300005564 Bacteria 4287
58 Ga0068854_100006168 3300005578 Bacteria 7609
59 Ga0068856_100011796 3300005614 Bacteria 8470
60 Ga0070702_100035730 3300005615 Bacteria 2747
61 Ga0070702_100319926 3300005615 Bacteria 1081
62 Ga0068859_100000962 3300005617 Bacteria 29502
63 Ga0068859_100001041 3300005617 Bacteria 28412
64 Ga0068859_100017621 3300005617 Bacteria 7180
65 Ga0068859_100103164 3300005617 Bacteria 2910
66 Ga0068864_100000007 3300005618 Bacteria 392187
67 Ga0068864_100067428 3300005618 Bacteria 3107
68 Ga0068864_100166991 3300005618 Bacteria 2004
69 Ga0068866_10167137 3300005718 Bacteria 1288
70 Ga0068870_10106948 3300005840 Bacteria 1591
71 Ga0068858_100000717 3300005842 Bacteria 34513
72 Ga0068860_100001123 3300005843 Bacteria 29467
73 Ga0068860_100008006 3300005843 Bacteria 10536
74 Ga0068862_100000900 3300005844 Bacteria 28819
75 Ga0070717_10002149 3300006028 Bacteria 13822
76 Ga0097621_100026214 3300006237 Bacteria 4570
77 Ga0068871_100014792 3300006358 Bacteria 5826
78 Ga0075428_100037379 3300006844 Bacteria 5346
79 Ga0075428_100178856 3300006844 Bacteria 2297
80 Ga0075428_100254190 3300006844 Bacteria 1893
81 Ga0075431_100001754 3300006847 Bacteria 20403
82 Ga0075431_100013054 3300006847 Bacteria 8391
83 Ga0075434_100002500 3300006871 Bacteria 16208
84 Ga0075434_100037431 3300006871 Bacteria 4803
85 Ga0075434_100059791 3300006871 Bacteria 3789
86 Ga0068865_100010970 3300006881 Bacteria 5656
87 Ga0068865_100285352 3300006881 Bacteria 1316
88 Ga0075436_100005820 3300006914 Bacteria 8463
89 Ga0097620_100000962 3300006931 Bacteria 29502
90 Ga0097620_100001041 3300006931 Bacteria 28412
91 Ga0097620_100017621 3300006931 Bacteria 7180
92 Ga0097620_100103166 3300006931 Bacteria 2910
93 Ga0075435_100000185 3300007076 Bacteria 37052
94 Ga0075435_100017808 3300007076 Bacteria 5385
95 Ga0075435_100034887 3300007076 Bacteria 3990
96 Ga0075435_100197789 3300007076 Bacteria 1703
97 Ga0105240_10103240 3300009093 Bacteria 3464
98 Ga0111539_10000007 3300009094 Bacteria 418059
99 Ga0111539_10075867 3300009094 Bacteria 3960
100 Ga0111539_10137782 3300009094 Bacteria 2858
101 Ga0105245_10000010 3300009098 Bacteria 278233
102 Ga0105245_10004535 3300009098 Bacteria 12264
103 Ga0105245_10033645 3300009098 Bacteria 4544
104 Ga0105247_10077082 3300009101 Bacteria 2094
105 Ga0114129_10028223 3300009147 Bacteria 7951
106 Ga0114129_10070176 3300009147 Bacteria 4885
107 Ga0105243_10166459 3300009148 Bacteria 1906
108 Ga0105243_10188755 3300009148 Unclassified 1798
109 Ga0105241_10015029 3300009174 Bacteria 5670
110 Ga0105242_10009415 3300009176 Bacteria 7491
111 Ga0105248_10000402 3300009177 Bacteria 50113
112 Ga0105238_10000002 3300009551 Bacteria 772711
113 Ga0105249_10129269 3300009553 Bacteria 2409
114 Ga0105249_10237507 3300009553 Bacteria 1800
115 Ga0157369_10000503 3300013105 Bacteria 51496
116 Ga0157374_10000038 3300013296 Bacteria 169868
117 Ga0157378_10000035 3300013297 Bacteria 117634
118 Ga0157378_10003616 3300013297 Bacteria 13683
119 Ga0157378_10027213 3300013297 Bacteria 5047
120 Ga0163162_10212198 3300013306 Bacteria 2066
121 Ga0157375_10000003 3300013308 Bacteria 476325
122 Ga0157375_10001164 3300013308 Bacteria 22732
123 Ga0157375_10001446 3300013308 Bacteria 20427
124 Ga0157375_10114542 3300013308 Bacteria 2798
125 Ga0157380_10062150 3300014326 Bacteria 2991
126 Ga0157380_10193592 3300014326 Bacteria 1797
127 Ga0157377_10000004 3300014745 Bacteria 430019
128 Ga0157377_10000074 3300014745 Bacteria 77443
129 Ga0157379_10013266 3300014968 Bacteria 7217
130 Ga0157376_10000002 3300014969 Bacteria 684532
131 Ga0157376_10002634 3300014969 Bacteria 12203
132 Ga0213873_10000001 3300021358 Bacteria 1657979
133 Ga0213873_10006589 3300021358 Bacteria 2293
134 Ga0213876_10000002 3300021384 Bacteria 1168769
135 Ga0213876_10000018 3300021384 Bacteria 282299
136 Ga0213876_10003407 3300021384 Bacteria 9098
137 Ga0213876_10086632 3300021384 Bacteria 1657
138 Ga0207680_10000650 3300025903 Bacteria 16384
139 Ga0207699_10000123 3300025906 Bacteria 55115
140 Ga0207693_10429680 3300025915 Bacteria 1032
141 Ga0207660_10037744 3300025917 Bacteria 3369
142 Ga0207646_10052845 3300025922 Bacteria 3635
143 Ga0207646_10085157 3300025922 Bacteria 2828
144 Ga0207681_10000044 3300025923 Bacteria 128566
145 Ga0207694_10000001 3300025924 Bacteria 4078485
146 Ga0207650_10003803 3300025925 Bacteria 10321
147 Ga0207659_10000002 3300025926 Bacteria 619441
148 Ga0207687_10000005 3300025927 Bacteria 770649
149 Ga0207687_10000527 3300025927 Bacteria 25638
150 Ga0207687_10027035 3300025927 Bacteria 3846
151 Ga0207700_10022719 3300025928 Bacteria 4308
152 Ga0207686_10033464 3300025934 Bacteria 3069
153 Ga0207686_10146087 3300025934 Bacteria 1640
154 Ga0207670_10022160 3300025936 Bacteria 3933
155 Ga0207670_10137883 3300025936 Bacteria 1796
156 Ga0207670_10142123 3300025936 Bacteria 1771
157 Ga0207691_10011796 3300025940 Bacteria 8386
158 Ga0207691_10015504 3300025940 Bacteria 7245
159 Ga0207691_10222335 3300025940 Bacteria 1637
160 Ga0207711_10000099 3300025941 Bacteria 91701
161 Ga0207689_10031773 3300025942 Bacteria 4391
162 Ga0207689_10078809 3300025942 Bacteria 2708
163 Ga0207689_10176760 3300025942 Bacteria 1760
164 Ga0207661_10000091 3300025944 Bacteria 59700
165 Ga0207651_10045803 3300025960 Bacteria 2936
166 Ga0207651_10057286 3300025960 Bacteria 2687
167 Ga0207651_10392600 3300025960 Bacteria 1179
168 Ga0207712_10212901 3300025961 Bacteria 1540
169 Ga0207640_10003628 3300025981 Bacteria 8332
170 Ga0207658_10015512 3300025986 Bacteria 5227
171 Ga0207677_10000001 3300026023 Bacteria 534789
172 Ga0207677_10000411 3300026023 Bacteria 29248
173 Ga0207703_10004019 3300026035 Bacteria 12169
174 Ga0207639_10000028 3300026041 Bacteria 197736
175 Ga0207678_10210030 3300026067 Bacteria 1665
176 Ga0207708_10000022 3300026075 Bacteria 181216
177 Ga0207708_10039979 3300026075 Bacteria 3575
178 Ga0207702_10011597 3300026078 Bacteria 7345
179 Ga0207648_10021216 3300026089 Bacteria 5839
180 Ga0207648_10354259 3300026089 Bacteria 1323
181 Ga0207676_10000015 3300026095 Bacteria 329100
182 Ga0207676_10104914 3300026095 Bacteria 2352
183 Ga0207674_10025469 3300026116 Bacteria 6308
184 Ga0207675_100013118 3300026118 Bacteria 7733
185 Ga0210002_1010310 3300027617 Bacteria 1433
186 Ga0209974_10055787 3300027876 Bacteria 1333
187 Ga0207428_10000008 3300027907 Bacteria 423201
188 Ga0207428_10042998 3300027907 Bacteria 3651
189 Ga0268266_10000161 3300028379 Bacteria 125387
190 Ga0268266_10011686 3300028379 Bacteria 7619
191 Ga0268265_10000541 3300028380 Bacteria 38471
192 Ga0268264_10001166 3300028381 Bacteria 25561
193 Ga0268264_10014310 3300028381 Bacteria 6524
194 Ga0307511_10002631 3300030521 Bacteria 18733
195 Ga0307508_10037767 3300031616 Bacteria 4342
196 Ga0307416_100597529 3300032002 Bacteria 1183
197 Ga0316583_10004595 3300032133 Bacteria 4923
198 Ga0373929_0000007 3300035085 Bacteria 315743
199 Ga0373943_0103198 3300035170 Bacteria 1494
200 Ga0373946_0104891 3300035171 Unclassified 1272
201 Ga0373935_0005342 3300035692 Bacteria 7565
202 Ga0316582_0091989 3300036647 Bacteria 1998
203 Ga0436365_0248511 3300039437 Bacteria 44170
204 Ga0436365_0604468 3300039437 Bacteria 6294
205 Ga0436365_0661440 3300039437 Bacteria 22827
206 Ga0436365_1139438 3300039437 Bacteria 14911
207 Ga0436365_1617699 3300039437 Bacteria 1501
208 Ga0436363_0359740 3300039450 Bacteria 2797
209 Ga0436362_0272072 3300039453 Bacteria 138134
210 Ga0436362_0403067 3300039453 Bacteria 8137
211 Ga0451793_0414003 3300041452 Bacteria 1207
212 Ga0451577_0008856 3300042876 Bacteria 9742
213 Ga0451577_0067547 3300042876 Bacteria 3188
214 Ga0451577_0093026 3300042876 Bacteria 2692
215 Ga0451577_0229747 3300042876 Bacteria 1677
216 Ga0451577_0332438 3300042876 Bacteria 1378
217 Ga0466963_0067392 3300044694 Bacteria 2402
218 Ga0453684_0000503 3300044712 Bacteria 152937
219 Ga0453684_0095321 3300044712 Bacteria 3658
220 Ga0453684_0345950 3300044712 Bacteria 1678
221 Ga0466960_0044373 3300044901 Bacteria 2119
222 Ga0451576_0020373 3300045051 Bacteria 7224
223 Ga0466958_0237762 3300045836 Unclassified 1164
224 Ga0495603_0163453 3300046455 Unclassified 1291
225 Ga0495580_0047950 3300046472 Bacteria 3027
226 Ga0495582_0020351 3300046473 Unclassified 3631
227 Ga0495639_0053978 3300046475 Bacteria 1831
228 Ga0495620_0000427 3300046515 Bacteria 28060
229 Ga0495658_0041430 3300046683 Bacteria 2566
230 Ga0496101_0201369 3300048904 Bacteria 1539
231 Ga0496102_0002573 3300048905 Bacteria 15466
232 Ga0496103_0160570 3300048906 Bacteria 1441
233 Ga0496105_0362837 3300048908 Bacteria 1155
234 Ga0496106_0010916 3300048909 Bacteria 6713
235 Ga0496107_0001234 3300048910 Bacteria 15619
236 Ga0496108_0247341 3300048911 Bacteria 1551
237 Ga0496109_0159428 3300048912 Bacteria 2114
238 Ga0496110_0013625 3300048913 Bacteria 6732
239 Ga0496111_0002438 3300048914 Bacteria 11235
240 Ga0496114_0000031 3300048917 Bacteria 168230
241 Ga0501067_0004409 3300049583 Bacteria 7760
242 Ga0501068_0029716 3300049584 Bacteria 3238
243 Ga0501075_0000337 3300049591 Bacteria 26500
244 Ga0501077_0002019 3300049593 Bacteria 12256
245 Ga0501080_0027335 3300049742 Bacteria 5304
246 Ga0501080_0059238 3300049742 Bacteria 3564
247 Ga0501081_0188745 3300049743 Bacteria 1492
248 Ga0501083_0006842 3300049744 Bacteria 8094
249 nmdc:mga05p37_114401_c1 3300050507 Bacteria 3316
250 nmdc:mga06r32_10167_c1 3300050510 Bacteria 8494
251 nmdc:mga06r32_1197_c1 3300050510 Bacteria 23338
252 nmdc:mga08y16_13_c2 3300050511 Bacteria 418063
253 nmdc:mga08y16_500703_c1 3300050511 Bacteria 1234
254 nmdc:mga08y16_63556_c1 3300050511 Bacteria 3855
255 nmdc:mga0n895_172961_c1 3300050512 Bacteria 2191
256 nmdc:mga0n895_319510_c1 3300050512 Bacteria 1573
257 nmdc:mga0n895_36382_c1 3300050512 Bacteria 4753
258 nmdc:mga0n895_5146_c1 3300050512 Bacteria 10876
259 nmdc:mga0n895_65004_c1 3300050512 Bacteria 3610
260 nmdc:mga0rr50_18841_c1 3300050513 Bacteria 4645
261 nmdc:mga0rr50_22119_c1 3300050513 Bacteria 4357
262 nmdc:mga0rr50_337843_c1 3300050513 Bacteria 1265
263 nmdc:mga0rr50_716_c1 3300050513 Bacteria 17853
264 nmdc:mga0rr50_96329_c1 3300050513 Bacteria 2315
265 nmdc:mga08x19_170334_c1 3300050514 Bacteria 1483
266 nmdc:mga08x19_8713_c1 3300050514 Bacteria 6047
267 nmdc:mga0a205_63181_c1 3300050515 Bacteria 3577
268 Ga0495655_0000365 3300053083 Bacteria 7933
269 Ga0501082_0000325 3300060353 Bacteria 42343
270 Ga0530510_0065287 3300061734 Bacteria 2637
271 Ga0105239_10186753
272 rootH1_10065271
273 rootH1_10206969
274 Ga0065707_10103568
275 Ga0065707_10132634
276 Ga0065707_10133539
277 Ga0070658_10166769
278 Ga0070676_10014793
279 Ga0070683_100000087
280 Ga0070683_100094557
281 Ga0070683_100277320
282 Ga0070690_100069772
283 Ga0070690_100363232
284 Ga0070670_100004548
285 Ga0068869_100073611
286 Ga0068869_100187704
287 Ga0068869_100303827
288 Ga0070666_10000298
289 Ga0070680_100051549
290 Ga0070682_100000035
291 Ga0068868_100001406
292 Ga0068868_100003715
293 Ga0070692_10007451
294 Ga0070669_100000204
295 Ga0070674_100020748
296 Ga0070673_100015243
297 Ga0070688_100022097
298 Ga0070667_100004548
299 Ga0070667_100154221
300 Ga0070709_10000113
301 Ga0070713_100017096
302 Ga0070701_10000978
303 Ga0070701_10020375
304 Ga0070705_100042653
305 Ga0070700_100000119
306 Ga0070700_100026652
307 Ga0070708_100341518
308 Ga0070678_100285104
309 Ga0068867_100017575
310 Ga0070706_100063724
311 Ga0070707_100156093
312 Ga0070698_100046839
313 Ga0070698_100482433
314 Ga0070684_100000320
315 Ga0070672_100006809
316 Ga0070672_100007226
317 Ga0070672_100184629
318 Ga0070686_100009138
319 Ga0070686_100019243
320 Ga0070686_100050353
321 Ga0070686_100195855
322 Ga0070695_100017861
323 Ga0070696_100155204
324 Ga0070665_100000438
325 Ga0070665_100008980
326 Ga0070704_100017079
327 Ga0070664_100033789
328 Ga0068854_100006168
329 Ga0068856_100011796
330 Ga0070702_100035730
331 Ga0070702_100319926
332 Ga0068859_100000962
333 Ga0068859_100001041
334 Ga0068859_100017621
335 Ga0068859_100103164
336 Ga0068864_100000007
337 Ga0068864_100067428
338 Ga0068864_100166991
339 Ga0068866_10167137
340 Ga0068870_10106948
341 Ga0068858_100000717
342 Ga0068860_100001123
343 Ga0068860_100008006
344 Ga0068862_100000900
345 Ga0070717_10002149
346 Ga0097621_100026214
347 Ga0068871_100014792
348 Ga0075428_100037379
349 Ga0075428_100178856
350 Ga0075428_100254190
351 Ga0075431_100001754
352 Ga0075431_100013054
353 Ga0075434_100002500
354 Ga0075434_100037431
355 Ga0075434_100059791
356 Ga0068865_100010970
357 Ga0068865_100285352
358 Ga0075436_100005820
359 Ga0097620_100000962
360 Ga0097620_100001041
361 Ga0097620_100017621
362 Ga0097620_100103166
363 Ga0075435_100000185
364 Ga0075435_100017808
365 Ga0075435_100034887
366 Ga0075435_100197789
367 Ga0105240_10103240
368 Ga0111539_10000007
369 Ga0111539_10075867
370 Ga0111539_10137782
371 Ga0105245_10000010
372 Ga0105245_10004535
373 Ga0105245_10033645
374 Ga0105247_10077082
375 Ga0114129_10028223
376 Ga0114129_10070176
377 Ga0105243_10166459
378 Ga0105243_10188755
379 Ga0105241_10015029
380 Ga0105242_10009415
381 Ga0105248_10000402
382 Ga0105238_10000002
383 Ga0105249_10129269
384 Ga0105249_10237507
385 Ga0157369_10000503
386 Ga0157374_10000038
387 Ga0157378_10000035
388 Ga0157378_10003616
389 Ga0157378_10027213
390 Ga0163162_10212198
391 Ga0157375_10000003
392 Ga0157375_10001164
393 Ga0157375_10001446
394 Ga0157375_10114542
395 Ga0157380_10062150
396 Ga0157380_10193592
397 Ga0157377_10000004
398 Ga0157377_10000074
399 Ga0157379_10013266
400 Ga0157376_10000002
401 Ga0157376_10002634
402 Ga0213873_10000001
403 Ga0213873_10006589
404 Ga0213876_10000002
405 Ga0213876_10000018
406 Ga0213876_10003407
407 Ga0213876_10086632
408 Ga0207680_10000650
409 Ga0207699_10000123
410 Ga0207693_10429680
411 Ga0207660_10037744
412 Ga0207646_10052845
413 Ga0207646_10085157
414 Ga0207681_10000044
415 Ga0207694_10000001
416 Ga0207650_10003803
417 Ga0207659_10000002
418 Ga0207687_10000005
419 Ga0207687_10000527
420 Ga0207687_10027035
421 Ga0207700_10022719
422 Ga0207686_10033464
423 Ga0207686_10146087
424 Ga0207670_10022160
425 Ga0207670_10137883
426 Ga0207670_10142123
427 Ga0207691_10011796
428 Ga0207691_10015504
429 Ga0207691_10222335
430 Ga0207711_10000099
431 Ga0207689_10031773
432 Ga0207689_10078809
433 Ga0207689_10176760
434 Ga0207661_10000091
435 Ga0207651_10045803
436 Ga0207651_10057286
437 Ga0207651_10392600
438 Ga0207712_10212901
439 Ga0207640_10003628
440 Ga0207658_10015512
441 Ga0207677_10000001
442 Ga0207677_10000411
443 Ga0207703_10004019
444 Ga0207639_10000028
445 Ga0207678_10210030
446 Ga0207708_10000022
447 Ga0207708_10039979
448 Ga0207702_10011597
449 Ga0207648_10021216
450 Ga0207648_10354259
451 Ga0207676_10000015
452 Ga0207676_10104914
453 Ga0207674_10025469
454 Ga0207675_100013118
455 Ga0210002_1010310
456 Ga0209974_10055787
457 Ga0207428_10000008
458 Ga0207428_10042998
459 Ga0268266_10000161
460 Ga0268266_10011686
461 Ga0268265_10000541
462 Ga0268264_10001166
463 Ga0268264_10014310
464 Ga0307511_10002631
465 Ga0307508_10037767
466 Ga0307416_100597529
467 Ga0316583_10004595
468 Ga0373929_0000007
469 Ga0373943_0103198
470 Ga0373946_0104891
471 Ga0373935_0005342
472 Ga0316582_0091989
473 Ga0436365_0248511
474 Ga0436365_0604468
475 Ga0436365_0661440
476 Ga0436365_1139438
477 Ga0436365_1617699
478 Ga0436363_0359740
479 Ga0436362_0272072
480 Ga0436362_0403067
481 Ga0451793_0414003
482 Ga0451577_0008856
483 Ga0451577_0067547
484 Ga0451577_0093026
485 Ga0451577_0229747
486 Ga0451577_0332438
487 Ga0466963_0067392
488 Ga0453684_0000503
489 Ga0453684_0095321
490 Ga0453684_0345950
491 Ga0466960_0044373
492 Ga0451576_0020373
493 Ga0466958_0237762
494 Ga0495603_0163453
495 Ga0495580_0047950
496 Ga0495582_0020351
497 Ga0495639_0053978
498 Ga0495620_0000427
499 Ga0495658_0041430
500 Ga0496101_0201369
501 Ga0496102_0002573
502 Ga0496103_0160570
503 Ga0496105_0362837
504 Ga0496106_0010916
505 Ga0496107_0001234
506 Ga0496108_0247341
507 Ga0496109_0159428
508 Ga0496110_0013625
509 Ga0496111_0002438
510 Ga0496114_0000031
511 Ga0501067_0004409
512 Ga0501068_0029716
513 Ga0501075_0000337
514 Ga0501077_0002019
515 Ga0501080_0027335
516 Ga0501080_0059238
517 Ga0501081_0188745
518 Ga0501083_0006842
519 nmdc:mga05p37_114401_c1
520 nmdc:mga06r32_10167_c1
521 nmdc:mga06r32_1197_c1
522 nmdc:mga08y16_13_c2
523 nmdc:mga08y16_500703_c1
524 nmdc:mga08y16_63556_c1
525 nmdc:mga0n895_172961_c1
526 nmdc:mga0n895_319510_c1
527 nmdc:mga0n895_36382_c1
528 nmdc:mga0n895_5146_c1
529 nmdc:mga0n895_65004_c1
530 nmdc:mga0rr50_18841_c1
531 nmdc:mga0rr50_22119_c1
532 nmdc:mga0rr50_337843_c1
533 nmdc:mga0rr50_716_c1
534 nmdc:mga0rr50_96329_c1
535 nmdc:mga08x19_170334_c1
536 nmdc:mga08x19_8713_c1
537 nmdc:mga0a205_63181_c1
538 Ga0495655_0000365
539 Ga0501082_0000325
540 Ga0530510_0065287

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01040

UbiA

UbiA prenyltransferase family

60

350

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.7012 1 312
4tq3-assembly1.cif.gz_A structure of a ubia homolog from archaeoglobus fulgidus bound to gpp and mg2+ 0.6955 6 312
7bpu-assembly1.cif.gz_A structural and mechanistic insights into the biosynthesis of digeranylgeranylglyceryl phosphate synthase in membranes 0.6927 1 312
4tq3-assembly1.cif.gz_A structure of a ubia homolog from archaeoglobus fulgidus bound to gpp and mg2+ 0.6849 6 312
4tq4-assembly3.cif.gz_C structure of a ubia homolog from archaeoglobus fulgidus bound to dmapp and mg2+ 0.6829 7 312
ID Description Score Start End Superfamily
af_A0A0R0FY91_1_151_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.8212 54 161 1.10.357.140
af_I1N2Z4_95_254_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.758 12 171 1.10.357.140
af_A0A0R0IQ72_105_369_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.7492 14 304 1.20.1070.10
af_K7LZY1_114_275_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.7466 5 169 1.10.357.140
af_Q57727_14_160_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.7428 10 174 1.10.357.140
ID Description Score Start End GO Terms
AF-A0A2V8TWP0-F1-model_v4 Uncharacterized protein 0.9792 148 314 GO:0016020
GO:0016765
AF-A0A1Q7RI50-F1-model_v4 Uncharacterized protein 0.9726 107 314 GO:0016020
GO:0016765
AF-A0A1Q7RI50-F1-model_v4 Uncharacterized protein 0.9635 107 314 GO:0016020
GO:0016765
AF-A0A2V7USF1-F1-model_v4 Homogentisate phytyltransferase 0.9409 1 314 GO:0016020
GO:0016765
AF-A0A2V7USF1-F1-model_v4 Homogentisate phytyltransferase 0.938 1 314 GO:0016020
GO:0016765

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