F377151

General Info

Members Datasets Scaffolds Average Seq Length
270 158 270 303

Family's Representative Sequence

Representative Sequence 3300046455|Ga0495603_0082337|Ga0495603_0082337_752_1657
Length 301
Sequence MIDLIEVGLVRVVAAFVSLLPMRTVRRLGARLGHVAYALDRAHRNRALANLAAAFPAKPEAERRALARTMFGHFGSLLLELLRFGTYTQDEMRAATEFEGTEHVRLAFQQGKGALFFTGHFGYWEIHGIASGLTIHPESPIAVLARPLDNARLNAMLERIRTRTGNTVIYRNGAVRRILRALAANRPVAILIDQHLHSPDAIYVDFFRRPAATTSALAALALRTGAPVIPVFALPLPDGRYRLVYEHAVDPPTADTPDAVREFTQRCTDVLEMYVRRHPELWLWMHRRWRATDERRSEADA

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
34 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
111 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
112 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
113 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
114 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
115 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
116 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
117 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
118 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
126 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
127 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
128 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
129 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
130 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
131 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
132 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
133 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
134 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
135 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
136 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
139 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
140 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
153 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.85
Rhizosphere 98.15
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002276 3300003203 Bacteria 9054
2 JGI25406J46586_10004097 3300003203 Bacteria 6812
3 Ga0065712_10093616 3300005290 Unclassified 2275
4 Ga0065715_10257047 3300005293 Bacteria 1149
5 Ga0065707_10124992 3300005295 Bacteria 2033
6 Ga0065707_10262214 3300005295 Unclassified 1094
7 Ga0070676_10010832 3300005328 Bacteria 4949
8 Ga0070690_100037357 3300005330 Bacteria 3060
9 Ga0070690_100194539 3300005330 Bacteria 1408
10 Ga0068869_100128852 3300005334 Bacteria 1943
11 Ga0070666_10116792 3300005335 Bacteria 1848
12 Ga0068868_100183228 3300005338 Bacteria 1738
13 Ga0070689_100042509 3300005340 Bacteria 3490
14 Ga0070689_100537439 3300005340 Bacteria 1006
15 Ga0070687_100007916 3300005343 Bacteria 4471
16 Ga0070661_100494815 3300005344 Bacteria 978
17 Ga0070675_100006227 3300005354 Bacteria 9152
18 Ga0070675_100012013 3300005354 Bacteria 6788
19 Ga0070675_100250116 3300005354 Bacteria 1551
20 Ga0070675_100253313 3300005354 Bacteria 1541
21 Ga0070675_100344572 3300005354 Unclassified 1320
22 Ga0070671_100006555 3300005355 Bacteria 9306
23 Ga0070674_100002920 3300005356 Bacteria 9472
24 Ga0070673_100102228 3300005364 Unclassified 2362
25 Ga0070667_100027110 3300005367 Bacteria 4767
26 Ga0070713_100052418 3300005436 Bacteria 3378
27 Ga0070701_10001013 3300005438 Bacteria 10224
28 Ga0070701_10016938 3300005438 Bacteria 3399
29 Ga0070701_10162645 3300005438 Unclassified 1294
30 Ga0070705_100000663 3300005440 Bacteria 19708
31 Ga0070705_100007573 3300005440 Bacteria 5350
32 Ga0070700_100248940 3300005441 Bacteria 1274
33 Ga0070700_100334593 3300005441 Bacteria 1117
34 Ga0070694_100003294 3300005444 Bacteria 9656
35 Ga0070694_100012342 3300005444 Bacteria 5308
36 Ga0070694_100106884 3300005444 Bacteria 1988
37 Ga0070662_100006502 3300005457 Bacteria 7539
38 Ga0070662_100113904 3300005457 Bacteria 2064
39 Ga0070662_100143721 3300005457 Unclassified 1851
40 Ga0070681_10015959 3300005458 Bacteria 7489
41 Ga0068867_100001539 3300005459 Bacteria 16006
42 Ga0070685_10034628 3300005466 Bacteria 2845
43 Ga0070685_10064690 3300005466 Unclassified 2151
44 Ga0070707_100089390 3300005468 Bacteria 2980
45 Ga0070707_100142354 3300005468 Bacteria 2334
46 Ga0070698_100005649 3300005471 Bacteria 13693
47 Ga0070698_100010484 3300005471 Bacteria 9885
48 Ga0070698_100166638 3300005471 Bacteria 2146
49 Ga0070698_100430326 3300005471 Bacteria 1254
50 Ga0070699_100001875 3300005518 Bacteria 19020
51 Ga0070699_100011681 3300005518 Bacteria 7581
52 Ga0070699_100012221 3300005518 Bacteria 7410
53 Ga0070699_100049322 3300005518 Bacteria 3644
54 Ga0070699_100069096 3300005518 Bacteria 3069
55 Ga0070699_100336518 3300005518 Bacteria 1358
56 Ga0070684_100022410 3300005535 Bacteria 5268
57 Ga0070684_100327049 3300005535 Bacteria 1409
58 Ga0070697_100029009 3300005536 Bacteria 4434
59 Ga0070697_100126735 3300005536 Unclassified 2139
60 Ga0070672_100247460 3300005543 Bacteria 1501
61 Ga0070672_100442548 3300005543 Unclassified 1119
62 Ga0070695_100000212 3300005545 Bacteria 28184
63 Ga0070696_100000342 3300005546 Bacteria 28263
64 Ga0070696_100024237 3300005546 Bacteria 4123
65 Ga0070696_100048147 3300005546 Bacteria 2958
66 Ga0070704_100002704 3300005549 Bacteria 10021
67 Ga0070704_100008968 3300005549 Bacteria 6027
68 Ga0070704_100091135 3300005549 Bacteria 2272
69 Ga0070704_100099981 3300005549 Bacteria 2183
70 Ga0070664_100009500 3300005564 Bacteria 7886
71 Ga0070664_100040549 3300005564 Bacteria 3926
72 Ga0068857_100081477 3300005577 Bacteria 2890
73 Ga0070702_100034106 3300005615 Bacteria 2803
74 Ga0070702_100271994 3300005615 Bacteria 1159
75 Ga0068852_100095895 3300005616 Bacteria 2665
76 Ga0068859_100002208 3300005617 Bacteria 19742
77 Ga0068859_100019857 3300005617 Bacteria 6745
78 Ga0068864_100036504 3300005618 Bacteria 4190
79 Ga0068864_100045765 3300005618 Unclassified 3754
80 Ga0068866_10082513 3300005718 Bacteria 1730
81 Ga0068861_100002093 3300005719 Bacteria 12939
82 Ga0068870_10060272 3300005840 Bacteria 2037
83 Ga0068863_100323196 3300005841 Bacteria 1499
84 Ga0068858_100053723 3300005842 Bacteria 3726
85 Ga0068858_100395757 3300005842 Bacteria 1327
86 Ga0068860_100003414 3300005843 Bacteria 16326
87 Ga0068860_100075989 3300005843 Unclassified 3194
88 Ga0068862_100000827 3300005844 Bacteria 30636
89 Ga0081539_10000024 3300005985 Bacteria 354702
90 Ga0081539_10000222 3300005985 Bacteria 133128
91 Ga0081539_10002859 3300005985 Bacteria 22960
92 Ga0081539_10005530 3300005985 Bacteria 12817
93 Ga0070717_10434919 3300006028 Bacteria 1181
94 Ga0070715_10107048 3300006163 Bacteria 1313
95 Ga0097621_100006263 3300006237 Bacteria 8443
96 Ga0097621_100049744 3300006237 Bacteria 3407
97 Ga0075428_100003344 3300006844 Bacteria 17557
98 Ga0075428_100084620 3300006844 Unclassified 3460
99 Ga0075428_100113093 3300006844 Unclassified 2957
100 Ga0075428_100133697 3300006844 Bacteria 2697
101 Ga0075430_100007576 3300006846 Bacteria 9172
102 Ga0075431_100200594 3300006847 Unclassified 2041
103 Ga0075431_100230254 3300006847 Unclassified 1888
104 Ga0075433_10003201 3300006852 Bacteria 12625
105 Ga0075433_10050276 3300006852 Unclassified 3628
106 Ga0075434_100002926 3300006871 Bacteria 15175
107 Ga0075434_100119897 3300006871 Bacteria 2645
108 Ga0075434_100139451 3300006871 Bacteria 2444
109 Ga0075434_100220358 3300006871 Bacteria 1917
110 Ga0075429_100399346 3300006880 Bacteria 1204
111 Ga0068865_100025318 3300006881 Bacteria 3902
112 Ga0097620_100002208 3300006931 Bacteria 19742
113 Ga0097620_100019857 3300006931 Bacteria 6745
114 Ga0075435_100006387 3300007076 Bacteria 8332
115 Ga0075435_100023527 3300007076 Bacteria 4767
116 Ga0111539_10004760 3300009094 Bacteria 17717
117 Ga0111539_10007108 3300009094 Bacteria 14349
118 Ga0111539_10013787 3300009094 Bacteria 10099
119 Ga0111539_10021870 3300009094 Bacteria 7863
120 Ga0111539_10035864 3300009094 Bacteria 6003
121 Ga0111539_10201839 3300009094 Bacteria 2319
122 Ga0114129_10000827 3300009147 Bacteria 39985
123 Ga0114129_10020645 3300009147 Bacteria 9365
124 Ga0114129_10025477 3300009147 Bacteria 8382
125 Ga0114129_10049443 3300009147 Bacteria 5907
126 Ga0114129_10257611 3300009147 Bacteria 2340
127 Ga0114129_10415396 3300009147 Bacteria 1771
128 Ga0105242_10205864 3300009176 Bacteria 1750
129 Ga0105249_10034984 3300009553 Bacteria 4554
130 Ga0157374_10228829 3300013296 Bacteria 1826
131 Ga0163162_10137173 3300013306 Bacteria 2558
132 Ga0157375_10003263 3300013308 Bacteria 14080
133 Ga0157375_10022481 3300013308 Bacteria 5804
134 Ga0163163_10034859 3300014325 Bacteria 4878
135 Ga0157377_10017739 3300014745 Bacteria 3687
136 Ga0157377_10257521 3300014745 Unclassified 1134
137 Ga0157376_10042993 3300014969 Bacteria 3706
138 Ga0163161_10006174 3300017792 Bacteria 8300
139 Ga0207682_10014649 3300025893 Unclassified 3056
140 Ga0207645_10063939 3300025907 Bacteria 2351
141 Ga0207643_10005120 3300025908 Bacteria 7014
142 Ga0207684_10272083 3300025910 Bacteria 1461
143 Ga0207684_10366424 3300025910 Unclassified 1240
144 Ga0207707_10055001 3300025912 Bacteria 3463
145 Ga0207662_10007709 3300025918 Bacteria 5864
146 Ga0207662_10057135 3300025918 Bacteria 2331
147 Ga0207681_10045340 3300025923 Bacteria 2951
148 Ga0207681_10200747 3300025923 Unclassified 1531
149 Ga0207659_10000905 3300025926 Bacteria 17661
150 Ga0207659_10040720 3300025926 Unclassified 3251
151 Ga0207659_10338885 3300025926 Bacteria 1245
152 Ga0207700_10015971 3300025928 Bacteria 4974
153 Ga0207644_10018142 3300025931 Unclassified 4758
154 Ga0207706_10019899 3300025933 Bacteria 6034
155 Ga0207706_10085176 3300025933 Bacteria 2779
156 Ga0207686_10129635 3300025934 Bacteria 1728
157 Ga0207670_10006980 3300025936 Bacteria 6286
158 Ga0207669_10160294 3300025937 Unclassified 1588
159 Ga0207691_10061169 3300025940 Unclassified 3421
160 Ga0207691_10139054 3300025940 Bacteria 2141
161 Ga0207691_10261175 3300025940 Bacteria 1493
162 Ga0207711_10181078 3300025941 Bacteria 1916
163 Ga0207689_10434722 3300025942 Unclassified 1096
164 Ga0207679_10038364 3300025945 Bacteria 3412
165 Ga0207679_10474691 3300025945 Unclassified 1112
166 Ga0207651_10006634 3300025960 Bacteria 6084
167 Ga0207651_10037253 3300025960 Bacteria 3185
168 Ga0207651_10274420 3300025960 Unclassified 1390
169 Ga0207668_10066050 3300025972 Bacteria 2563
170 Ga0207703_10117038 3300026035 Bacteria 2282
171 Ga0207703_10444382 3300026035 Bacteria 1210
172 Ga0207678_10012965 3300026067 Bacteria 7315
173 Ga0207708_10029419 3300026075 Bacteria 4164
174 Ga0207708_10124374 3300026075 Bacteria 2012
175 Ga0207641_10068881 3300026088 Bacteria 3035
176 Ga0207641_10125173 3300026088 Unclassified 2300
177 Ga0207648_10010176 3300026089 Bacteria 8944
178 Ga0207648_10216455 3300026089 Unclassified 1701
179 Ga0207676_10042114 3300026095 Bacteria 3511
180 Ga0207676_10291338 3300026095 Bacteria 1486
181 Ga0207674_10014184 3300026116 Bacteria 8809
182 Ga0207674_10057123 3300026116 Bacteria 3957
183 Ga0207675_100005902 3300026118 Bacteria 11688
184 Ga0207675_100081738 3300026118 Unclassified 3030
185 Ga0207698_10015335 3300026142 Bacteria 5128
186 Ga0207428_10000751 3300027907 Bacteria 37099
187 Ga0207428_10001411 3300027907 Bacteria 25306
188 Ga0207428_10261126 3300027907 Unclassified 1290
189 Ga0268266_10181622 3300028379 Bacteria 1916
190 Ga0268265_10000420 3300028380 Bacteria 45660
191 Ga0268264_10005134 3300028381 Bacteria 11094
192 Ga0268264_10074154 3300028381 Bacteria 2890
193 Ga0307408_100152534 3300031548 Bacteria 1825
194 Ga0307410_10028756 3300031852 Bacteria 3531
195 Ga0307416_100328143 3300032002 Bacteria 1536
196 Ga0307415_100074239 3300032126 Bacteria 2403
197 Ga0307415_100259812 3300032126 Unclassified 1416
198 Ga0373934_0039402 3300035086 Bacteria 1863
199 Ga0373943_0049803 3300035170 Bacteria 2057
200 Ga0373947_0316349 3300035725 Bacteria 1043
201 Ga0373937_0076256 3300036401 Bacteria 3096
202 Ga0450894_001698 3300042131 Bacteria 3110
203 Ga0450895_000259 3300042132 Bacteria 2716
204 Ga0450896_001438 3300042133 Bacteria 2931
205 Ga0450908_013788 3300042184 Bacteria 1458
206 Ga0450918_005072 3300042531 Bacteria 2371
207 Ga0451577_0492754 3300042876 Bacteria 1113
208 Ga0439440_0065145 3300042993 Unclassified 938
209 Ga0451576_0033192 3300045051 Bacteria 5487
210 Ga0451576_0376677 3300045051 Bacteria 1487
211 Ga0495603_0082337 3300046455 Bacteria 1885
212 Ga0495629_0032003 3300046459 Bacteria 3724
213 Ga0495638_0009705 3300046460 Bacteria 6728
214 Ga0495639_0063470 3300046475 Unclassified 1696
215 Ga0495594_0005439 3300046499 Bacteria 6547
216 Ga0495643_0006181 3300046522 Bacteria 7947
217 Ga0495642_0006052 3300046528 Bacteria 4645
218 Ga0495598_0017432 3300046537 Bacteria 1851
219 Ga0495598_0050522 3300046537 Unclassified 1250
220 Ga0495609_0077831 3300046538 Bacteria 1452
221 Ga0495621_0005482 3300046539 Bacteria 3649
222 Ga0495621_0005565 3300046539 Bacteria 3629
223 Ga0495621_0011138 3300046539 Bacteria 2773
224 Ga0495621_0050616 3300046539 Bacteria 1485
225 Ga0495633_0032985 3300046558 Unclassified 2499
226 Ga0495634_0136709 3300046642 Bacteria 1558
227 Ga0495659_0001218 3300046664 Bacteria 8906
228 Ga0495659_0009485 3300046664 Bacteria 3107
229 Ga0495659_0023225 3300046664 Bacteria 2106
230 Ga0495659_0062366 3300046664 Bacteria 1379
231 Ga0495588_0000989 3300046674 Bacteria 12428
232 Ga0495657_0236514 3300046675 Bacteria 1103
233 Ga0495658_0041210 3300046683 Bacteria 2571
234 Ga0495669_0117658 3300046684 Bacteria 1244
235 Ga0495613_0178859 3300046689 Bacteria 1503
236 Ga0495636_0074944 3300047318 Unclassified 1450
237 Ga0496105_0103933 3300048908 Bacteria 2346
238 Ga0496110_0036757 3300048913 Bacteria 4254
239 Ga0496112_0366225 3300048915 Unclassified 1383
240 Ga0496114_0022746 3300048917 Bacteria 5109
241 Ga0496115_0042882 3300048918 Bacteria 3606
242 Ga0501068_0123203 3300049584 Unclassified 1618
243 nmdc:mga05p37_140963_c1 3300050507 Bacteria 2954
244 nmdc:mga05p37_19777_c1 3300050507 Bacteria 8147
245 nmdc:mga05p37_205757_c1 3300050507 Bacteria 2381
246 nmdc:mga05p37_324592_c1 3300050507 Bacteria 1821
247 nmdc:mga05p37_665324_c1 3300050507 Unclassified 1163
248 nmdc:mga09592_127767_c1 3300050508 Unclassified 2186
249 nmdc:mga09592_390718_c1 3300050508 Bacteria 1203
250 nmdc:mga0qj67_261492_c1 3300050509 Unclassified 1404
251 nmdc:mga06r32_245797_c1 3300050510 Bacteria 1777
252 nmdc:mga08y16_1121_c1 3300050511 Bacteria 26404
253 nmdc:mga08y16_262354_c1 3300050511 Bacteria 1784
254 nmdc:mga08y16_5651_c1 3300050511 Bacteria 13102
255 nmdc:mga08y16_95656_c1 3300050511 Bacteria 3094
256 nmdc:mga0n895_13212_c1 3300050512 Bacteria 7439
257 nmdc:mga0n895_139030_c1 3300050512 Bacteria 2456
258 nmdc:mga0n895_17848_c1 3300050512 Bacteria 6552
259 nmdc:mga0n895_2445_c1 3300050512 Bacteria 14509
260 nmdc:mga0n895_284029_c1 3300050512 Bacteria 1678
261 nmdc:mga0rr50_25384_c1 3300050513 Bacteria 4119
262 nmdc:mga08x19_64_c1 3300050514 Bacteria 24706
263 nmdc:mga0a205_169249_c1 3300050515 Bacteria 2081
264 nmdc:mga0a205_2564_c1 3300050515 Bacteria 16018
265 nmdc:mga0a205_28075_c1 3300050515 Bacteria 5377
266 nmdc:mga0a205_3887_c1 3300050515 Bacteria 13374
267 nmdc:mga0a205_89800_c1 3300050515 Bacteria 2970
268 Ga0495601_0032546 3300053077 Unclassified 3247
269 Ga0495619_0012367 3300053085 Bacteria 5373
270 Ga0501082_0282786 3300060353 Unclassified 1444

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025893 Ga0207682_10014649 Ga0207682_100146492 269
2 3300042993 Ga0439440_0065145 Ga0439440_0065145_62_892 272
3 3300035725 Ga0373947_0316349 Ga0373947_0316349_31_873 276
4 3300046689 Ga0495613_0178859 Ga0495613_0178859_639_1481 276
5 3300006163 Ga0070715_10107048 Ga0070715_101070481 279
6 3300006237 Ga0097621_100049744 Ga0097621_1000497444 279
7 3300005458 Ga0070681_10015959 Ga0070681_100159594 280
8 3300025912 Ga0207707_10055001 Ga0207707_100550014 280
9 3300005340 Ga0070689_100537439 Ga0070689_1005374391 281
10 3300005354 Ga0070675_100344572 Ga0070675_1003445722 281
11 3300005618 Ga0068864_100045765 Ga0068864_1000457652 281
12 3300046558 Ga0495633_0032985 Ga0495633_0032985_1289_2134 281
13 3300048915 Ga0496112_0366225 Ga0496112_0366225_19_870 281
14 3300050511 nmdc:mga08y16_95656_c1 nmdc:mga08y16_95656_c1_538_1383 281
15 3300009094 Ga0111539_10201839 Ga0111539_102018392 282
16 3300009147 Ga0114129_10415396 Ga0114129_104153962 282
17 3300050507 nmdc:mga05p37_665324_c1 nmdc:mga05p37_665324_c1_215_1063 282
18 3300050511 nmdc:mga08y16_262354_c1 nmdc:mga08y16_262354_c1_509_1357 282
19 3300005718 Ga0068866_10082513 Ga0068866_100825132 283
20 3300026118 Ga0207675_100081738 Ga0207675_1000817382 283
21 3300005841 Ga0068863_100323196 Ga0068863_1003231962 287
22 3300005535 Ga0070684_100327049 Ga0070684_1003270492 288
23 3300006871 Ga0075434_100139451 Ga0075434_1001394511 288
24 3300050512 nmdc:mga0n895_139030_c1 nmdc:mga0n895_139030_c1_55_921 288
25 3300050514 nmdc:mga08x19_64_c1 nmdc:mga08x19_64_c1_23825_24691 288
26 3300005344 Ga0070661_100494815 Ga0070661_1004948151 289
27 3300005364 Ga0070673_100102228 Ga0070673_1001022283 289
28 3300005438 Ga0070701_10016938 Ga0070701_100169382 289
29 3300005440 Ga0070705_100000663 Ga0070705_10000066312 289
30 3300005440 Ga0070705_100007573 Ga0070705_1000075734 289
31 3300005441 Ga0070700_100248940 Ga0070700_1002489402 289
32 3300005444 Ga0070694_100003294 Ga0070694_1000032943 289
33 3300005444 Ga0070694_100012342 Ga0070694_1000123422 289
34 3300005468 Ga0070707_100089390 Ga0070707_1000893902 289
35 3300005468 Ga0070707_100142354 Ga0070707_1001423542 289
36 3300005471 Ga0070698_100010484 Ga0070698_1000104848 289
37 3300005518 Ga0070699_100011681 Ga0070699_1000116811 289
38 3300005518 Ga0070699_100012221 Ga0070699_1000122218 289
39 3300005535 Ga0070684_100022410 Ga0070684_1000224102 289
40 3300005536 Ga0070697_100029009 Ga0070697_1000290094 289
41 3300005536 Ga0070697_100126735 Ga0070697_1001267352 289
42 3300005545 Ga0070695_100000212 Ga0070695_10000021211 289
43 3300005546 Ga0070696_100000342 Ga0070696_10000034212 289
44 3300005546 Ga0070696_100048147 Ga0070696_1000481472 289
45 3300005549 Ga0070704_100091135 Ga0070704_1000911352 289
46 3300005549 Ga0070704_100099981 Ga0070704_1000999812 289
47 3300005615 Ga0070702_100034106 Ga0070702_1000341063 289
48 3300006871 Ga0075434_100119897 Ga0075434_1001198972 289
49 3300007076 Ga0075435_100006387 Ga0075435_1000063876 289
50 3300007076 Ga0075435_100023527 Ga0075435_1000235274 289
51 3300009094 Ga0111539_10021870 Ga0111539_100218702 289
52 3300009147 Ga0114129_10025477 Ga0114129_100254773 289
53 3300009176 Ga0105242_10205864 Ga0105242_102058642 289
54 3300025910 Ga0207684_10272083 Ga0207684_102720831 289
55 3300025945 Ga0207679_10474691 Ga0207679_104746912 289
56 3300025960 Ga0207651_10274420 Ga0207651_102744202 289
57 3300045051 Ga0451576_0033192 Ga0451576_0033192_4456_5325 289
58 3300046528 Ga0495642_0006052 Ga0495642_0006052_3213_4082 289
59 3300046538 Ga0495609_0077831 Ga0495609_0077831_171_1040 289
60 3300046539 Ga0495621_0005482 Ga0495621_0005482_2740_3609 289
61 3300046539 Ga0495621_0050616 Ga0495621_0050616_431_1300 289
62 3300046664 Ga0495659_0009485 Ga0495659_0009485_953_1822 289
63 3300046664 Ga0495659_0062366 Ga0495659_0062366_246_1115 289
64 3300046684 Ga0495669_0117658 Ga0495669_0117658_197_1066 289
65 3300050507 nmdc:mga05p37_140963_c1 nmdc:mga05p37_140963_c1_1636_2505 289
66 3300050512 nmdc:mga0n895_284029_c1 nmdc:mga0n895_284029_c1_151_1020 289
67 3300050513 nmdc:mga0rr50_25384_c1 nmdc:mga0rr50_25384_c1_1030_1899 289
68 3300050515 nmdc:mga0a205_169249_c1 nmdc:mga0a205_169249_c1_76_945 289
69 3300050515 nmdc:mga0a205_28075_c1 nmdc:mga0a205_28075_c1_2291_3160 289
70 3300050515 nmdc:mga0a205_89800_c1 nmdc:mga0a205_89800_c1_329_1198 289
71 3300005290 Ga0065712_10093616 Ga0065712_100936162 290
72 3300005466 Ga0070685_10034628 Ga0070685_100346283 290
73 3300005564 Ga0070664_100009500 Ga0070664_1000095009 290
74 3300014325 Ga0163163_10034859 Ga0163163_100348596 290
75 3300025940 Ga0207691_10061169 Ga0207691_100611694 290
76 3300025960 Ga0207651_10006634 Ga0207651_100066342 290
77 3300025972 Ga0207668_10066050 Ga0207668_100660502 290
78 3300026035 Ga0207703_10444382 Ga0207703_104443822 290
79 3300026095 Ga0207676_10291338 Ga0207676_102913382 290
80 3300031852 Ga0307410_10028756 Ga0307410_100287562 290
81 3300032126 Ga0307415_100074239 Ga0307415_1000742392 290
82 3300042133 Ga0450896_001438 Ga0450896_001438_778_1731 296
83 3300005354 Ga0070675_100250116 Ga0070675_1002501162 297
84 3300025926 Ga0207659_10338885 Ga0207659_103388852 297
85 3300046455 Ga0495603_0082337 Ga0495603_0082337_752_1657 297
86 3300046459 Ga0495629_0032003 Ga0495629_0032003_2264_3169 297
87 3300046539 Ga0495621_0011138 Ga0495621_0011138_1830_2735 297
88 3300050510 nmdc:mga06r32_245797_c1 nmdc:mga06r32_245797_c1_193_1209 299
89 3300005518 Ga0070699_100336518 Ga0070699_1003365181 300
90 3300046683 Ga0495658_0041210 Ga0495658_0041210_785_1690 301
91 3300005436 Ga0070713_100052418 Ga0070713_1000524183 302
92 3300006028 Ga0070717_10434919 Ga0070717_104349192 302
93 3300025928 Ga0207700_10015971 Ga0207700_100159712 302
94 3300035086 Ga0373934_0039402 Ga0373934_0039402_384_1322 302
95 3300036401 Ga0373937_0076256 Ga0373937_0076256_1563_2501 302
96 3300006844 Ga0075428_100084620 Ga0075428_1000846202 303
97 3300006847 Ga0075431_100230254 Ga0075431_1002302542 303
98 3300005985 Ga0081539_10002859 Ga0081539_100028598 304
99 3300005355 Ga0070671_100006555 Ga0070671_1000065552 305
100 3300005356 Ga0070674_100002920 Ga0070674_1000029202 305
101 3300005438 Ga0070701_10162645 Ga0070701_101626452 305
102 3300005457 Ga0070662_100143721 Ga0070662_1001437212 305
103 3300005471 Ga0070698_100430326 Ga0070698_1004303262 305
104 3300005543 Ga0070672_100442548 Ga0070672_1004425481 305
105 3300005564 Ga0070664_100040549 Ga0070664_1000405493 305
106 3300005618 Ga0068864_100036504 Ga0068864_1000365043 305
107 3300005843 Ga0068860_100075989 Ga0068860_1000759893 305
108 3300006871 Ga0075434_100220358 Ga0075434_1002203582 305
109 3300025923 Ga0207681_10200747 Ga0207681_102007472 305
110 3300025931 Ga0207644_10018142 Ga0207644_100181426 305
111 3300025933 Ga0207706_10085176 Ga0207706_100851762 305
112 3300025937 Ga0207669_10160294 Ga0207669_101602942 305
113 3300025940 Ga0207691_10139054 Ga0207691_101390542 305
114 3300025945 Ga0207679_10038364 Ga0207679_100383643 305
115 3300026067 Ga0207678_10012965 Ga0207678_100129653 305
116 3300026088 Ga0207641_10125173 Ga0207641_101251732 305
117 3300026095 Ga0207676_10042114 Ga0207676_100421143 305
118 3300026116 Ga0207674_10057123 Ga0207674_100571232 305
119 3300028381 Ga0268264_10074154 Ga0268264_100741544 305
120 3300005293 Ga0065715_10257047 Ga0065715_102570472 306
121 3300005295 Ga0065707_10124992 Ga0065707_101249922 306
122 3300005295 Ga0065707_10262214 Ga0065707_102622142 306
123 3300005328 Ga0070676_10010832 Ga0070676_100108326 306
124 3300005330 Ga0070690_100037357 Ga0070690_1000373573 306
125 3300005330 Ga0070690_100194539 Ga0070690_1001945392 306
126 3300005334 Ga0068869_100128852 Ga0068869_1001288522 306
127 3300005335 Ga0070666_10116792 Ga0070666_101167922 306
128 3300005338 Ga0068868_100183228 Ga0068868_1001832282 306
129 3300005340 Ga0070689_100042509 Ga0070689_1000425094 306
130 3300005343 Ga0070687_100007916 Ga0070687_1000079163 306
131 3300005354 Ga0070675_100006227 Ga0070675_1000062274 306
132 3300005354 Ga0070675_100012013 Ga0070675_1000120139 306
133 3300005354 Ga0070675_100253313 Ga0070675_1002533132 306
134 3300005367 Ga0070667_100027110 Ga0070667_1000271103 306
135 3300005438 Ga0070701_10001013 Ga0070701_100010131 306
136 3300005444 Ga0070694_100106884 Ga0070694_1001068842 306
137 3300005457 Ga0070662_100006502 Ga0070662_1000065029 306
138 3300005457 Ga0070662_100113904 Ga0070662_1001139041 306
139 3300005459 Ga0068867_100001539 Ga0068867_10000153915 306
140 3300005466 Ga0070685_10064690 Ga0070685_100646902 306
141 3300005471 Ga0070698_100005649 Ga0070698_1000056494 306
142 3300005471 Ga0070698_100166638 Ga0070698_1001666382 306
143 3300005518 Ga0070699_100001875 Ga0070699_10000187512 306
144 3300005518 Ga0070699_100049322 Ga0070699_1000493224 306
145 3300005543 Ga0070672_100247460 Ga0070672_1002474602 306
146 3300005546 Ga0070696_100024237 Ga0070696_1000242372 306
147 3300005549 Ga0070704_100002704 Ga0070704_1000027049 306
148 3300005549 Ga0070704_100008968 Ga0070704_1000089685 306
149 3300005577 Ga0068857_100081477 Ga0068857_1000814772 306
150 3300005615 Ga0070702_100271994 Ga0070702_1002719941 306
151 3300005616 Ga0068852_100095895 Ga0068852_1000958952 306
152 3300005617 Ga0068859_100002208 Ga0068859_1000022083 306
153 3300005617 Ga0068859_100019857 Ga0068859_1000198572 306
154 3300005719 Ga0068861_100002093 Ga0068861_10000209311 306
155 3300005840 Ga0068870_10060272 Ga0068870_100602722 306
156 3300005842 Ga0068858_100053723 Ga0068858_1000537233 306
157 3300005842 Ga0068858_100395757 Ga0068858_1003957572 306
158 3300005843 Ga0068860_100003414 Ga0068860_10000341418 306
159 3300005844 Ga0068862_100000827 Ga0068862_10000082717 306
160 3300006237 Ga0097621_100006263 Ga0097621_1000062636 306
161 3300006844 Ga0075428_100003344 Ga0075428_10000334415 306
162 3300006844 Ga0075428_100133697 Ga0075428_1001336972 306
163 3300006880 Ga0075429_100399346 Ga0075429_1003993461 306
164 3300006881 Ga0068865_100025318 Ga0068865_1000253183 306
165 3300006931 Ga0097620_100002208 Ga0097620_1000022083 306
166 3300006931 Ga0097620_100019857 Ga0097620_1000198572 306
167 3300009094 Ga0111539_10013787 Ga0111539_1001378712 306
168 3300009147 Ga0114129_10000827 Ga0114129_1000082711 306
169 3300009147 Ga0114129_10020645 Ga0114129_100206455 306
170 3300009147 Ga0114129_10257611 Ga0114129_102576112 306
171 3300009553 Ga0105249_10034984 Ga0105249_100349841 306
172 3300013296 Ga0157374_10228829 Ga0157374_102288292 306
173 3300013306 Ga0163162_10137173 Ga0163162_101371732 306
174 3300013308 Ga0157375_10003263 Ga0157375_1000326312 306
175 3300013308 Ga0157375_10022481 Ga0157375_100224816 306
176 3300014745 Ga0157377_10017739 Ga0157377_100177393 306
177 3300014745 Ga0157377_10257521 Ga0157377_102575212 306
178 3300014969 Ga0157376_10042993 Ga0157376_100429934 306
179 3300017792 Ga0163161_10006174 Ga0163161_100061744 306
180 3300025907 Ga0207645_10063939 Ga0207645_100639392 306
181 3300025908 Ga0207643_10005120 Ga0207643_100051202 306
182 3300025910 Ga0207684_10366424 Ga0207684_103664242 306
183 3300025918 Ga0207662_10007709 Ga0207662_100077094 306
184 3300025918 Ga0207662_10057135 Ga0207662_100571353 306
185 3300025923 Ga0207681_10045340 Ga0207681_100453402 306
186 3300025926 Ga0207659_10000905 Ga0207659_1000090514 306
187 3300025926 Ga0207659_10040720 Ga0207659_100407204 306
188 3300025933 Ga0207706_10019899 Ga0207706_100198994 306
189 3300025934 Ga0207686_10129635 Ga0207686_101296352 306
190 3300025936 Ga0207670_10006980 Ga0207670_100069802 306
191 3300025940 Ga0207691_10261175 Ga0207691_102611752 306
192 3300025941 Ga0207711_10181078 Ga0207711_101810782 306
193 3300025960 Ga0207651_10037253 Ga0207651_100372533 306
194 3300026035 Ga0207703_10117038 Ga0207703_101170382 306
195 3300026075 Ga0207708_10029419 Ga0207708_100294193 306
196 3300026088 Ga0207641_10068881 Ga0207641_100688812 306
197 3300026089 Ga0207648_10010176 Ga0207648_100101763 306
198 3300026089 Ga0207648_10216455 Ga0207648_102164551 306
199 3300026116 Ga0207674_10014184 Ga0207674_1001418411 306
200 3300026118 Ga0207675_100005902 Ga0207675_1000059028 306
201 3300026142 Ga0207698_10015335 Ga0207698_100153354 306
202 3300027907 Ga0207428_10001411 Ga0207428_100014114 306
203 3300028379 Ga0268266_10181622 Ga0268266_101816222 306
204 3300028380 Ga0268265_10000420 Ga0268265_100004205 306
205 3300028381 Ga0268264_10005134 Ga0268264_100051346 306
206 3300031548 Ga0307408_100152534 Ga0307408_1001525342 306
207 3300032002 Ga0307416_100328143 Ga0307416_1003281432 306
208 3300032126 Ga0307415_100259812 Ga0307415_1002598122 306
209 3300035170 Ga0373943_0049803 Ga0373943_0049803_871_1803 306
210 3300042131 Ga0450894_001698 Ga0450894_001698_1627_2547 306
211 3300042132 Ga0450895_000259 Ga0450895_000259_760_1680 306
212 3300042184 Ga0450908_013788 Ga0450908_013788_367_1287 306
213 3300042531 Ga0450918_005072 Ga0450918_005072_738_1658 306
214 3300042876 Ga0451577_0492754 Ga0451577_0492754_45_974 306
215 3300045051 Ga0451576_0376677 Ga0451576_0376677_211_1140 306
216 3300046460 Ga0495638_0009705 Ga0495638_0009705_5489_6421 306
217 3300046475 Ga0495639_0063470 Ga0495639_0063470_16_945 306
218 3300046499 Ga0495594_0005439 Ga0495594_0005439_1475_2404 306
219 3300046522 Ga0495643_0006181 Ga0495643_0006181_1972_2910 306
220 3300046537 Ga0495598_0017432 Ga0495598_0017432_412_1341 306
221 3300046537 Ga0495598_0050522 Ga0495598_0050522_199_1128 306
222 3300046539 Ga0495621_0005565 Ga0495621_0005565_1107_2036 306
223 3300046642 Ga0495634_0136709 Ga0495634_0136709_429_1361 306
224 3300046664 Ga0495659_0001218 Ga0495659_0001218_5502_6431 306
225 3300046664 Ga0495659_0023225 Ga0495659_0023225_831_1760 306
226 3300046674 Ga0495588_0000989 Ga0495588_0000989_8718_9647 306
227 3300046675 Ga0495657_0236514 Ga0495657_0236514_123_1055 306
228 3300047318 Ga0495636_0074944 Ga0495636_0074944_229_1158 306
229 3300048908 Ga0496105_0103933 Ga0496105_0103933_697_1629 306
230 3300048913 Ga0496110_0036757 Ga0496110_0036757_286_1218 306
231 3300048917 Ga0496114_0022746 Ga0496114_0022746_2444_3376 306
232 3300048918 Ga0496115_0042882 Ga0496115_0042882_769_1701 306
233 3300049584 Ga0501068_0123203 Ga0501068_0123203_415_1344 306
234 3300050507 nmdc:mga05p37_19777_c1 nmdc:mga05p37_19777_c1_2346_3275 306
235 3300050507 nmdc:mga05p37_205757_c1 nmdc:mga05p37_205757_c1_1044_1973 306
236 3300050507 nmdc:mga05p37_324592_c1 nmdc:mga05p37_324592_c1_644_1573 306
237 3300050508 nmdc:mga09592_390718_c1 nmdc:mga09592_390718_c1_45_974 306
238 3300050511 nmdc:mga08y16_1121_c1 nmdc:mga08y16_1121_c1_1028_1987 306
239 3300050512 nmdc:mga0n895_13212_c1 nmdc:mga0n895_13212_c1_4969_5898 306
240 3300050515 nmdc:mga0a205_3887_c1 nmdc:mga0a205_3887_c1_1768_2697 306
241 3300053077 Ga0495601_0032546 Ga0495601_0032546_1803_2735 306
242 3300053085 Ga0495619_0012367 Ga0495619_0012367_147_1079 306
243 3300060353 Ga0501082_0282786 Ga0501082_0282786_98_1027 306
244 3300003203 JGI25406J46586_10002276 JGI25406J46586_100022764 307
245 3300003203 JGI25406J46586_10004097 JGI25406J46586_100040977 307
246 3300005441 Ga0070700_100334593 Ga0070700_1003345932 307
247 3300005518 Ga0070699_100069096 Ga0070699_1000690964 307
248 3300005985 Ga0081539_10000024 Ga0081539_10000024125 307
249 3300005985 Ga0081539_10000222 Ga0081539_1000022246 307
250 3300005985 Ga0081539_10005530 Ga0081539_100055309 307
251 3300006844 Ga0075428_100113093 Ga0075428_1001130933 307
252 3300006846 Ga0075430_100007576 Ga0075430_1000075769 307
253 3300006847 Ga0075431_100200594 Ga0075431_1002005942 307
254 3300006852 Ga0075433_10003201 Ga0075433_100032019 307
255 3300006852 Ga0075433_10050276 Ga0075433_100502762 307
256 3300006871 Ga0075434_100002926 Ga0075434_1000029264 307
257 3300009094 Ga0111539_10004760 Ga0111539_1000476014 307
258 3300009094 Ga0111539_10007108 Ga0111539_1000710811 307
259 3300009094 Ga0111539_10035864 Ga0111539_100358645 307
260 3300009147 Ga0114129_10049443 Ga0114129_100494434 307
261 3300025942 Ga0207689_10434722 Ga0207689_104347222 307
262 3300026075 Ga0207708_10124374 Ga0207708_101243742 307
263 3300027907 Ga0207428_10000751 Ga0207428_100007512 307
264 3300027907 Ga0207428_10261126 Ga0207428_102611262 307
265 3300050508 nmdc:mga09592_127767_c1 nmdc:mga09592_127767_c1_291_1214 307
266 3300050509 nmdc:mga0qj67_261492_c1 nmdc:mga0qj67_261492_c1_225_1148 307
267 3300050511 nmdc:mga08y16_5651_c1 nmdc:mga08y16_5651_c1_8736_9659 307
268 3300050512 nmdc:mga0n895_17848_c1 nmdc:mga0n895_17848_c1_1418_2341 307
269 3300050512 nmdc:mga0n895_2445_c1 nmdc:mga0n895_2445_c1_11995_12918 307
270 3300050515 nmdc:mga0a205_2564_c1 nmdc:mga0a205_2564_c1_2525_3448 307

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03279

Lip_A_acyltrans

Bacterial lipid A biosynthesis acyltransferase

4

291

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.8849 46 286
5f34-assembly1.cif.gz_A crystal structure of membrane associated pata from mycobacterium smegmatis in complex with s-hexadecyl coenzyme a - p21 space group 0.8357 46 286
5kn7-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii 0.8037 6 285
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.8025 15 294
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.7268 15 294
ID Description Score Start End Superfamily
af_Q54I12_580_724_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.6306 100 227 3.40.50.620
af_O74842_910_1130_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.6225 84 188 3.40.50.300
af_Q22949_143_292_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.6107 100 228 3.40.50.620
af_P31119_15_138_3.40.1010.10 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.5839 108 228 3.40.1010.10
af_Q96L91_1862_2082_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.5805 87 195 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1F2RE43-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9651 1 288 GO:0005886
GO:0009247
GO:0016746
AF-A0A1F2RE43-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9619 1 288 GO:0005886
GO:0009247
GO:0016746
AF-A0A355ETI3-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9557 2 287 GO:0005886
GO:0009247
GO:0016746
AF-A0A2V8E2I9-F1-model_v4 Lipid A biosynthesis acyltransferase 0.9532 1 166 GO:0005886
GO:0009247
GO:0016746
AF-A0A7X7QYG3-F1-model_v4 CPBP family intramembrane metalloprotease 0.9527 4 291 GO:0004222
GO:0005886
GO:0009247
GO:0016746
GO:0071586

Feature Viewer

pLDDT pTM Quality
86.64 0.85 High
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Predicted Structure (AlphaFold2)

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