F377308

General Info

Members Datasets Scaffolds Average Seq Length
270 181 247 601

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221574|2643884681
Length 671
Sequence VLVANRGEIACRVFRTARHMGIRTIAVYSEADADALHVREADEAVLIGPAPARESYLDPAKVLAAAKATGAEAIHPGYGFLSENADFAEAVMAAGLVWIGPPPAAIRAMGLKDAAKTLMIEAGVPVTPGYQGEDQSDATLTAEAARIGYPVLIKAVAGGGGKGMKRVDRPEDFAAGLASARREGQSSFGDPRVLIESYITRPRHIEVQIFGDSHGKVVHLYERDCSLQRRHQKVIEEAPAPGMDDATRKAVTDAAVRAARAVNYEGAGTIEFIADASDGLKADRIWFMEMNTRLQVEHPVTEEVTGVDLVEWQFLVAAGEPLPLEQDEISLNGWAMEARLYAEDPANGFLPSIGRLDHFLMPNPDNYRAPHDVRVDTGVEEGGEVSQFYDPMISKIIAHADTRTGAAERLAAACRQVEVWPVRTNAAFLSRCLEHPRFVAGDVDTGFIAAEEASLISTEIPEAVIAAAFAAQADKDDYYRTKMYGDGQEIWRSSSHALFGFRLNGPGYFRRSMSVAGQPVEAEFRAMDGDTWWEVKTGDRTWGAGAVAGGQVVLDDAITGEDASVEVDDELSVLFLDGQAWPYGPLTHGGGSDHSAASDGSLRAPMPGKIVATPARPGDTVTRGQPVVVLEAMKMEHALVAPFDGVVGEVGVAVGDQVSADTVVAVVTATD

Samples

Sample ID Description Type Environment
1 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
2 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
3 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
4 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
5 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
6 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
7 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
8 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
9 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
10 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
11 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
12 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
13 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
14 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
15 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
16 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
17 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
18 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
19 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
20 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
21 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
22 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
23 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
24 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
25 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
26 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
27 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
28 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
29 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
30 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
31 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
32 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
33 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
34 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
55 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
56 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
57 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
58 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
59 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
60 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
61 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
62 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
63 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
117 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
118 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
124 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
130 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
133 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
136 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
137 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
138 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
142 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
143 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
144 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
155 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
158 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
159 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
160 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
161 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
162 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
163 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
166 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
167 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
168 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
169 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
170 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
171 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
172 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
173 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
174 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
178 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
179 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.48
Metatranscriptomes 0
Isolates 8.52

Biome Distribution

Category Percentage (%)
Aerial Root 0.74
Bulb 0
Endosphere 9.26
Nodule 0.37
Rhizoplane 5.19
Rhizosphere 70
Stem 0
Stem Tuber 0
Unclassified 14.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000489 3300001989 Bacteria 13968
2 JGI24749J21850_1000085 3300002076 Bacteria 16806
3 JGI24744J21845_10000028 3300002077 Bacteria 16962
4 JGI24751J29686_10000150 3300002459 Bacteria 33380
5 Ga0055536_1001221 3300003781 Bacteria 15918
6 Ga0065704_10000332 3300005289 Bacteria 32777
7 Ga0065704_10002674 3300005289 Bacteria 8831
8 Ga0070670_100056953 3300005331 Bacteria 3355
9 Ga0070666_10003028 3300005335 Bacteria 10194
10 Ga0070660_100003878 3300005339 Bacteria 10330
11 Ga0070660_100069449 3300005339 Bacteria 2747
12 Ga0070668_100000227 3300005347 Bacteria 36436
13 Ga0070668_100001243 3300005347 Bacteria 18180
14 Ga0070668_100016350 3300005347 Bacteria 5548
15 Ga0070669_100000129 3300005353 Bacteria 69209
16 Ga0070669_100000655 3300005353 Bacteria 25579
17 Ga0070669_100002676 3300005353 Bacteria 12836
18 Ga0070671_100000082 3300005355 Bacteria 60649
19 Ga0070671_100053786 3300005355 Bacteria 3347
20 Ga0070674_100005435 3300005356 Bacteria 7359
21 Ga0070659_100031334 3300005366 Bacteria 4118
22 Ga0070659_100040621 3300005366 Bacteria 3635
23 Ga0070667_100000058 3300005367 Bacteria 148071
24 Ga0070667_100000937 3300005367 Bacteria 26885
25 Ga0070667_100001711 3300005367 Bacteria 19616
26 Ga0070667_100005788 3300005367 Bacteria 10315
27 Ga0070667_100019487 3300005367 Bacteria 5629
28 Ga0070663_100008795 3300005455 Bacteria 6230
29 Ga0070662_100016443 3300005457 Bacteria 4970
30 Ga0070662_100081688 3300005457 Bacteria 2408
31 Ga0070684_100059147 3300005535 Bacteria 3350
32 Ga0070672_100038711 3300005543 Bacteria 3647
33 Ga0070696_100018282 3300005546 Bacteria 4737
34 Ga0070665_100000398 3300005548 Bacteria 64092
35 Ga0068855_100133746 3300005563 Bacteria 2830
36 Ga0070664_100039426 3300005564 Bacteria 3981
37 Ga0068857_100028324 3300005577 Bacteria 4943
38 Ga0068854_100012052 3300005578 Bacteria 5651
39 Ga0068856_100119085 3300005614 Bacteria 2641
40 Ga0068856_100183447 3300005614 Bacteria 2106
41 Ga0068852_100084129 3300005616 Bacteria 2830
42 Ga0068864_100000383 3300005618 Bacteria 38584
43 Ga0068864_100000645 3300005618 Bacteria 29334
44 Ga0068863_100000031 3300005841 Bacteria 175602
45 Ga0068863_100000045 3300005841 Bacteria 147269
46 Ga0068858_100002443 3300005842 Bacteria 18778
47 Ga0068858_100005141 3300005842 Bacteria 12823
48 Ga0068860_100015469 3300005843 Bacteria 7449
49 Ga0068860_100016301 3300005843 Bacteria 7246
50 Ga0068862_100000477 3300005844 Bacteria 43274
51 Ga0068862_100091162 3300005844 Bacteria 2654
52 Ga0081455_10001021 3300005937 Bacteria 35299
53 Ga0075368_10000122 3300006042 Bacteria 20511
54 Ga0075363_100001296 3300006048 Bacteria 9321
55 Ga0075363_100003672 3300006048 Bacteria 6591
56 Ga0075364_10000557 3300006051 Bacteria 19122
57 Ga0075362_10000011 3300006177 Bacteria 108953
58 Ga0075367_10000636 3300006178 Bacteria 13459
59 Ga0075367_10002592 3300006178 Bacteria 8305
60 Ga0075366_10000190 3300006195 Bacteria 27138
61 Ga0075370_10004866 3300006353 Bacteria 6587
62 Ga0105251_10006566 3300009011 Bacteria 7377
63 Ga0105250_10004430 3300009092 Bacteria 6468
64 Ga0105240_10007509 3300009093 Bacteria 15821
65 Ga0105240_10089929 3300009093 Bacteria 3754
66 Ga0111539_10081587 3300009094 Bacteria 3804
67 Ga0105248_10001080 3300009177 Bacteria 30116
68 Ga0105248_10001470 3300009177 Bacteria 26223
69 Ga0105248_10020600 3300009177 Bacteria 7309
70 Ga0105237_10008978 3300009545 Bacteria 10759
71 Ga0105239_10012861 3300010375 Bacteria 9311
72 Ga0157373_10001375 3300013100 Bacteria 18658
73 Ga0157371_10013348 3300013102 Bacteria 6244
74 Ga0157370_10104795 3300013104 Bacteria 2647
75 Ga0157369_10131874 3300013105 Bacteria 2647
76 Ga0157378_10006509 3300013297 Bacteria 10211
77 Ga0163162_10002943 3300013306 Bacteria 16249
78 Ga0163162_10039933 3300013306 Bacteria 4691
79 Ga0163163_10051209 3300014325 Bacteria 4071
80 Ga0157380_10000213 3300014326 Bacteria 34344
81 Ga0209147_101304 3300025229 Bacteria 9602
82 Ga0209676_1000819 3300025292 Bacteria 40662
83 Ga0209676_1002344 3300025292 Bacteria 13685
84 Ga0209050_1011181 3300025298 Bacteria 4297
85 Ga0209257_1000060 3300025304 Bacteria 372267
86 Ga0207696_1002656 3300025711 Bacteria 8615
87 Ga0207713_1000392 3300025735 Bacteria 47466
88 Ga0207713_1007002 3300025735 Bacteria 6758
89 Ga0207680_10001706 3300025903 Bacteria 10353
90 Ga0207680_10002859 3300025903 Bacteria 8081
91 Ga0207680_10005828 3300025903 Bacteria 5913
92 Ga0207647_10045826 3300025904 Bacteria 2727
93 Ga0207645_10029264 3300025907 Bacteria 3552
94 Ga0207705_10009108 3300025909 Bacteria 7235
95 Ga0207705_10020341 3300025909 Bacteria 4746
96 Ga0207705_10062229 3300025909 Bacteria 2696
97 Ga0207705_10103051 3300025909 Bacteria 2101
98 Ga0207695_10016135 3300025913 Bacteria 8761
99 Ga0207695_10035543 3300025913 Bacteria 5402
100 Ga0207671_10005401 3300025914 Bacteria 11770
101 Ga0207660_10012134 3300025917 Bacteria 5631
102 Ga0207652_10005784 3300025921 Bacteria 10033
103 Ga0207681_10000023 3300025923 Bacteria 229753
104 Ga0207681_10000864 3300025923 Bacteria 19921
105 Ga0207681_10002537 3300025923 Bacteria 11601
106 Ga0207650_10000029 3300025925 Bacteria 236660
107 Ga0207644_10000869 3300025931 Bacteria 19077
108 Ga0207690_10038429 3300025932 Bacteria 3115
109 Ga0207706_10001813 3300025933 Bacteria 20981
110 Ga0207706_10008344 3300025933 Bacteria 9552
111 Ga0207669_10003044 3300025937 Bacteria 7221
112 Ga0207711_10000584 3300025941 Bacteria 36997
113 Ga0207711_10001129 3300025941 Bacteria 25496
114 Ga0207711_10039027 3300025941 Bacteria 4038
115 Ga0207679_10023713 3300025945 Bacteria 4200
116 Ga0207667_10017517 3300025949 Bacteria 8060
117 Ga0207667_10025404 3300025949 Bacteria 6483
118 Ga0207667_10150421 3300025949 Bacteria 2396
119 Ga0207651_10019272 3300025960 Bacteria 4083
120 Ga0207668_10000460 3300025972 Bacteria 25607
121 Ga0207668_10000816 3300025972 Bacteria 19095
122 Ga0207668_10000910 3300025972 Bacteria 17801
123 Ga0207640_10002017 3300025981 Bacteria 10966
124 Ga0207640_10015098 3300025981 Bacteria 4464
125 Ga0207640_10031791 3300025981 Bacteria 3266
126 Ga0207658_10000037 3300025986 Bacteria 148087
127 Ga0207658_10001760 3300025986 Bacteria 16263
128 Ga0207658_10006540 3300025986 Bacteria 7948
129 Ga0207658_10028311 3300025986 Bacteria 3945
130 Ga0207658_10047806 3300025986 Bacteria 3133
131 Ga0207658_10052722 3300025986 Bacteria 3002
132 Ga0207703_10000778 3300026035 Bacteria 31401
133 Ga0207703_10006362 3300026035 Bacteria 9437
134 Ga0207639_10003797 3300026041 Bacteria 10168
135 Ga0207639_10004935 3300026041 Bacteria 8986
136 Ga0207678_10003181 3300026067 Bacteria 14851
137 Ga0207678_10011359 3300026067 Bacteria 7817
138 Ga0207702_10015260 3300026078 Bacteria 6369
139 Ga0207702_10039295 3300026078 Bacteria 3963
140 Ga0207641_10000011 3300026088 Bacteria 384362
141 Ga0207641_10000050 3300026088 Bacteria 175954
142 Ga0207641_10014648 3300026088 Bacteria 6429
143 Ga0207676_10000099 3300026095 Bacteria 77720
144 Ga0207676_10002078 3300026095 Bacteria 14534
145 Ga0207674_10011418 3300026116 Bacteria 9981
146 Ga0207675_100001772 3300026118 Bacteria 21572
147 Ga0207698_10047239 3300026142 Bacteria 3259
148 Ga0207698_10061916 3300026142 Bacteria 2919
149 Ga0209813_10000062 3300027866 Bacteria 43852
150 Ga0268265_10000018 3300028380 Bacteria 285651
151 Ga0268264_10013645 3300028381 Bacteria 6686
152 Ga0307517_10045822 3300028786 Bacteria 4582
153 Ga0265338_10010700 3300028800 Bacteria 10716
154 Ga0307408_100057135 3300031548 Bacteria 2831
155 Ga0307405_10023038 3300031731 Bacteria 3532
156 Ga0307412_10003274 3300031911 Bacteria 8993
157 Ga0307409_100139846 3300031995 Bacteria 2084
158 Ga0307414_10075620 3300032004 Bacteria 2444
159 Ga0307510_10027191 3300033180 Bacteria 6559
160 Ga0395899_0001367 3300037312 Bacteria 20909
161 Ga0395899_0094410 3300037312 Bacteria 2164
162 Ga0395899_0105369 3300037312 Bacteria 2031
163 Ga0395900_0004328 3300037418 Bacteria 15058
164 Ga0395900_0113330 3300037418 Bacteria 2783
165 Ga0395900_0150979 3300037418 Bacteria 2373
166 Ga0395898_0003454 3300037466 Bacteria 17662
167 Ga0395898_0049797 3300037466 Bacteria 4103
168 Ga0395905_0001380 3300037471 Bacteria 29411
169 Ga0395905_0001407 3300037471 Bacteria 29130
170 Ga0395905_0002462 3300037471 Bacteria 20510
171 Ga0395905_0011609 3300037471 Bacteria 8509
172 Ga0395905_0016276 3300037471 Bacteria 7065
173 Ga0395905_0019340 3300037471 Bacteria 6457
174 Ga0395905_0020045 3300037471 Bacteria 6336
175 Ga0395905_0168641 3300037471 Bacteria 2056
176 Ga0395905_0169687 3300037471 Bacteria 2049
177 Ga0395901_0044487 3300038443 Bacteria 4605
178 Ga0466958_0005636 3300045836 Bacteria 6758
179 Ga0495627_000060 3300046453 Bacteria 140874
180 Ga0495650_0001132 3300046471 Bacteria 28975
181 Ga0495610_0028337 3300046512 Bacteria 2963
182 Ga0495616_0000640 3300046513 Bacteria 26130
183 Ga0495632_0000013 3300046519 Bacteria 247879
184 Ga0495637_0000091 3300046520 Bacteria 70339
185 Ga0495643_0000293 3300046522 Bacteria 70713
186 Ga0495648_0003233 3300046524 Bacteria 14451
187 Ga0495663_0000004 3300046525 Bacteria 355166
188 Ga0495633_0001344 3300046558 Bacteria 19273
189 Ga0495633_0009127 3300046558 Bacteria 5506
190 Ga0495625_0055720 3300046660 Bacteria 2818
191 Ga0495669_0000407 3300046684 Bacteria 20891
192 Ga0495671_0000121 3300046692 Bacteria 70713
193 Ga0495649_0001532 3300046694 Bacteria 17355
194 Ga0495686_0028374 3300047472 Bacteria 3645
195 Ga0496100_0011751 3300048903 Bacteria 4993
196 Ga0496101_0003623 3300048904 Bacteria 9640
197 Ga0496102_0000513 3300048905 Bacteria 42281
198 Ga0496102_0000901 3300048905 Bacteria 28178
199 Ga0496103_0000056 3300048906 Bacteria 143579
200 Ga0496103_0000345 3300048906 Bacteria 42238
201 Ga0496104_0000480 3300048907 Bacteria 34405
202 Ga0496105_0000057 3300048908 Bacteria 88084
203 Ga0496107_0000027 3300048910 Bacteria 108619
204 Ga0496107_0009635 3300048910 Bacteria 6699
205 Ga0496112_0014550 3300048915 Bacteria 7308
206 Ga0496113_0002848 3300048916 Bacteria 10174
207 Ga0496113_0021042 3300048916 Bacteria 4597
208 Ga0496116_0002116 3300048919 Bacteria 21146
209 Ga0496116_0084171 3300048919 Bacteria 1960
210 Ga0496117_0000473 3300048920 Bacteria 66756
211 Ga0496117_0001043 3300048920 Bacteria 42281
212 Ga0496117_0059627 3300048920 Bacteria 2634
213 Ga0496118_0001091 3300048921 Bacteria 42281
214 Ga0496118_0009145 3300048921 Bacteria 10072
215 Ga0496118_0025870 3300048921 Bacteria 5018
216 Ga0496119_0000079 3300048922 Bacteria 140247
217 Ga0496120_0000506 3300048923 Bacteria 60652
218 Ga0496121_0000069 3300048924 Bacteria 253087
219 Ga0496121_0001313 3300048924 Bacteria 42596
220 Ga0496121_0002852 3300048924 Bacteria 25500
221 Ga0496121_0005194 3300048924 Bacteria 16875
222 Ga0496121_0005584 3300048924 Bacteria 16063
223 Ga0496121_0006529 3300048924 Bacteria 14419
224 Ga0496122_0003893 3300048925 Bacteria 19130
225 Ga0496123_0001982 3300048926 Bacteria 26521
226 Ga0496124_0001115 3300048927 Bacteria 42281
227 Ga0496124_0002920 3300048927 Bacteria 21539
228 Ga0496125_0004227 3300048928 Bacteria 16726
229 Ga0496125_0004607 3300048928 Bacteria 15755
230 Ga0496126_0000103 3300048929 Bacteria 201037
231 Ga0496126_0137355 3300048929 Bacteria 2107
232 Ga0501223_000005 3300049663 Bacteria 137995
233 Ga0501257_000043 3300049686 Bacteria 36418
234 Ga0501225_0007969 3300049705 Bacteria 3052
235 Ga0501080_0003582 3300049742 Bacteria 13673
236 Ga0501083_0010712 3300049744 Bacteria 6450
237 nmdc:mga03683_31_c1 3300050489 Bacteria 69502
238 nmdc:mga03n38_222_c1 3300050490 Bacteria 13159
239 nmdc:mga0k408_18_c1 3300050493 Bacteria 112318
240 nmdc:mga06z11_36_c1 3300050494 Bacteria 55905
241 nmdc:mga04h51_119_c1 3300050495 Bacteria 23185
242 nmdc:mga07m45_7110_c1 3300050496 Bacteria 5700
243 nmdc:mga08y16_103998_c1 3300050511 Bacteria 2956
244 Ga0500643_005586 3300053087 Bacteria 5391
245 Ga0500642_0000001 3300053130 Bacteria 1468402
246 Ga0500624_000018 3300053157 Bacteria 131677
247 Ga0501082_0023332 3300060353 Bacteria 5337

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300037312 Ga0395899_0094410 Ga0395899_0094410_405_2150 523
2 3300037471 Ga0395905_0168641 Ga0395905_0168641_275_2017 527
3 3300048919 Ga0496116_0084171 Ga0496116_0084171_161_1933 538
4 3300028800 Ga0265338_10010700 Ga0265338_100107008 544
5 3300005564 Ga0070664_100039426 Ga0070664_1000394263 556
6 3300025945 Ga0207679_10023713 Ga0207679_100237133 556
7 3300006051 Ga0075364_10000557 Ga0075364_1000055710 557
8 3300009545 Ga0105237_10008978 Ga0105237_100089784 557
9 3300025914 Ga0207671_10005401 Ga0207671_100054015 557
10 3300006178 Ga0075367_10002592 Ga0075367_100025925 558
11 3300050496 nmdc:mga07m45_7110_c1 nmdc:mga07m45_7110_c1_201_2072 558
12 3300005355 Ga0070671_100053786 Ga0070671_1000537862 559
13 3300006353 Ga0075370_10004866 Ga0075370_100048663 560
14 3300046471 Ga0495650_0001132 Ga0495650_0001132_24951_26909 560
15 3300037418 Ga0395900_0113330 Ga0395900_0113330_437_2446 561
16 3300005347 Ga0070668_100000227 Ga0070668_10000022713 562
17 3300005367 Ga0070667_100000058 Ga0070667_10000005815 562
18 3300005457 Ga0070662_100081688 Ga0070662_1000816882 562
19 3300005614 Ga0068856_100183447 Ga0068856_1001834471 562
20 3300005841 Ga0068863_100000031 Ga0068863_10000003115 562
21 3300025903 Ga0207680_10002859 Ga0207680_100028596 562
22 3300025923 Ga0207681_10000864 Ga0207681_100008644 562
23 3300025972 Ga0207668_10000816 Ga0207668_100008163 562
24 3300025986 Ga0207658_10000037 Ga0207658_1000003715 562
25 3300026088 Ga0207641_10000050 Ga0207641_10000050114 562
26 3300037471 Ga0395905_0011609 Ga0395905_0011609_3557_5437 562
27 3300025933 Ga0207706_10001813 Ga0207706_100018132 563
28 3300028786 Ga0307517_10045822 Ga0307517_100458225 563
29 3300037471 Ga0395905_0019340 Ga0395905_0019340_3848_5710 563
30 3300002077 JGI24744J21845_10000028 JGI24744J21845_100000289 564
31 3300005331 Ga0070670_100056953 Ga0070670_1000569533 564
32 3300005366 Ga0070659_100040621 Ga0070659_1000406213 564
33 3300005546 Ga0070696_100018282 Ga0070696_1000182823 564
34 3300005577 Ga0068857_100028324 Ga0068857_1000283243 564
35 3300009094 Ga0111539_10081587 Ga0111539_100815873 564
36 3300013297 Ga0157378_10006509 Ga0157378_100065094 564
37 3300025960 Ga0207651_10019272 Ga0207651_100192722 564
38 3300025981 Ga0207640_10015098 Ga0207640_100150983 564
39 3300026116 Ga0207674_10011418 Ga0207674_1001141812 564
40 3300037418 Ga0395900_0150979 Ga0395900_0150979_337_2205 564
41 3300050511 nmdc:mga08y16_103998_c1 nmdc:mga08y16_103998_c1_960_2846 564
42 3300005578 Ga0068854_100012052 Ga0068854_1000120524 565
43 3300013100 Ga0157373_10001375 Ga0157373_1000137510 565
44 3300025981 Ga0207640_10002017 Ga0207640_1000201712 565
45 3300026067 Ga0207678_10011359 Ga0207678_1001135912 565
46 3300031911 Ga0307412_10003274 Ga0307412_100032743 565
47 3300005339 Ga0070660_100003878 Ga0070660_10000387816 566
48 3300005455 Ga0070663_100008795 Ga0070663_1000087953 566
49 3300013102 Ga0157371_10013348 Ga0157371_100133485 566
50 3300025909 Ga0207705_10009108 Ga0207705_100091083 566
51 3300025917 Ga0207660_10012134 Ga0207660_100121345 566
52 3300025921 Ga0207652_10005784 Ga0207652_100057841 566
53 3300026067 Ga0207678_10003181 Ga0207678_100031819 566
54 3300037466 Ga0395898_0049797 Ga0395898_0049797_2174_4036 566
55 3300037471 Ga0395905_0016276 Ga0395905_0016276_377_2248 566
56 3300045836 Ga0466958_0005636 Ga0466958_0005636_368_2230 566
57 3300049742 Ga0501080_0003582 Ga0501080_0003582_854_2752 566
58 3300049744 Ga0501083_0010712 Ga0501083_0010712_2192_4090 566
59 3300060353 Ga0501082_0023332 Ga0501082_0023332_2486_4384 566
60 3300005843 Ga0068860_100015469 Ga0068860_1000154698 567
61 3300009093 Ga0105240_10007509 Ga0105240_100075096 567
62 3300010375 Ga0105239_10012861 Ga0105239_100128613 567
63 3300025913 Ga0207695_10016135 Ga0207695_100161352 567
64 3300037312 Ga0395899_0001367 Ga0395899_0001367_4394_6283 567
65 3300037466 Ga0395898_0003454 Ga0395898_0003454_697_2586 567
66 3300037471 Ga0395905_0002462 Ga0395905_0002462_5881_7770 567
67 3300048924 Ga0496121_0000069 Ga0496121_0000069_245299_247146 567
68 3300048929 Ga0496126_0137355 Ga0496126_0137355_216_2063 567
69 3300005347 Ga0070668_100016350 Ga0070668_1000163504 568
70 3300005355 Ga0070671_100000082 Ga0070671_10000008245 568
71 3300005548 Ga0070665_100000398 Ga0070665_10000039822 568
72 3300025931 Ga0207644_10000869 Ga0207644_1000086915 568
73 3300025949 Ga0207667_10025404 Ga0207667_100254042 568
74 3300025972 Ga0207668_10000460 Ga0207668_1000046015 568
75 3300026088 Ga0207641_10014648 Ga0207641_100146483 568
76 3300048920 Ga0496117_0059627 Ga0496117_0059627_309_2171 568
77 3300048921 Ga0496118_0025870 Ga0496118_0025870_744_2606 568
78 3300048924 Ga0496121_0002852 Ga0496121_0002852_9961_11823 568
79 3300005289 Ga0065704_10002674 Ga0065704_100026745 569
80 3300005353 Ga0070669_100002676 Ga0070669_10000267610 569
81 3300005367 Ga0070667_100019487 Ga0070667_1000194873 569
82 3300009011 Ga0105251_10006566 Ga0105251_100065662 569
83 3300025735 Ga0207713_1000392 Ga0207713_100039236 569
84 3300025907 Ga0207645_10029264 Ga0207645_100292643 569
85 3300025923 Ga0207681_10002537 Ga0207681_1000253711 569
86 3300025986 Ga0207658_10006540 Ga0207658_100065406 569
87 3300048910 Ga0496107_0009635 Ga0496107_0009635_1708_3612 569
88 3300005339 Ga0070660_100069449 Ga0070660_1000694493 570
89 3300005366 Ga0070659_100031334 Ga0070659_1000313343 570
90 3300005535 Ga0070684_100059147 Ga0070684_1000591473 570
91 3300005563 Ga0068855_100133746 Ga0068855_1001337463 570
92 3300005614 Ga0068856_100119085 Ga0068856_1001190851 570
93 3300005616 Ga0068852_100084129 Ga0068852_1000841293 570
94 3300009093 Ga0105240_10089929 Ga0105240_100899293 570
95 3300013104 Ga0157370_10104795 Ga0157370_101047951 570
96 3300013105 Ga0157369_10131874 Ga0157369_101318741 570
97 3300025904 Ga0207647_10045826 Ga0207647_100458263 570
98 3300025909 Ga0207705_10020341 Ga0207705_100203413 570
99 3300025909 Ga0207705_10062229 Ga0207705_100622293 570
100 3300025913 Ga0207695_10035543 Ga0207695_100355432 570
101 3300025932 Ga0207690_10038429 Ga0207690_100384293 570
102 3300025949 Ga0207667_10017517 Ga0207667_1001751710 570
103 3300025981 Ga0207640_10031791 Ga0207640_100317913 570
104 3300026041 Ga0207639_10004935 Ga0207639_100049352 570
105 3300026078 Ga0207702_10039295 Ga0207702_100392952 570
106 3300026142 Ga0207698_10047239 Ga0207698_100472391 570
107 3300031995 Ga0307409_100139846 Ga0307409_1001398461 570
108 3300037312 Ga0395899_0105369 Ga0395899_0105369_112_2001 570
109 3300037418 Ga0395900_0004328 Ga0395900_0004328_9597_11474 570
110 3300037471 Ga0395905_0001380 Ga0395905_0001380_19923_21800 570
111 3300038443 Ga0395901_0044487 Ga0395901_0044487_443_2332 570
112 3300048916 Ga0496113_0021042 Ga0496113_0021042_1946_3835 570
113 3300046453 Ga0495627_000060 Ga0495627_000060_86591_88441 571
114 3300046519 Ga0495632_0000013 Ga0495632_0000013_192122_193975 571
115 3300046520 Ga0495637_0000091 Ga0495637_0000091_53561_55414 571
116 3300046522 Ga0495643_0000293 Ga0495643_0000293_53907_55760 571
117 3300046524 Ga0495648_0003233 Ga0495648_0003233_2280_4130 571
118 3300046525 Ga0495663_0000004 Ga0495663_0000004_299409_301262 571
119 3300046558 Ga0495633_0001344 Ga0495633_0001344_10843_12696 571
120 3300046660 Ga0495625_0055720 Ga0495625_0055720_951_2804 571
121 3300046692 Ga0495671_0000121 Ga0495671_0000121_14954_16807 571
122 3300047472 Ga0495686_0028374 Ga0495686_0028374_359_2212 571
123 3300048928 Ga0496125_0004227 Ga0496125_0004227_4317_6248 571
124 3300048924 Ga0496121_0001313 Ga0496121_0001313_548_2392 572
125 iso_pu_bacteria 2751185897 2753763912 572
126 3300002076 JGI24749J21850_1000085 JGI24749J21850_100008510 573
127 3300002459 JGI24751J29686_10000150 JGI24751J29686_1000015016 573
128 3300005353 Ga0070669_100000129 Ga0070669_10000012951 573
129 3300005367 Ga0070667_100001711 Ga0070667_10000171117 573
130 3300005618 Ga0068864_100000383 Ga0068864_10000038316 573
131 3300005844 Ga0068862_100000477 Ga0068862_10000047720 573
132 3300009177 Ga0105248_10001080 Ga0105248_1000108021 573
133 3300014325 Ga0163163_10051209 Ga0163163_100512092 573
134 3300014326 Ga0157380_10000213 Ga0157380_1000021320 573
135 3300025909 Ga0207705_10103051 Ga0207705_101030512 573
136 3300025923 Ga0207681_10000023 Ga0207681_1000002349 573
137 3300025925 Ga0207650_10000029 Ga0207650_1000002962 573
138 3300025941 Ga0207711_10000584 Ga0207711_1000058428 573
139 3300025986 Ga0207658_10047806 Ga0207658_100478062 573
140 3300026095 Ga0207676_10000099 Ga0207676_1000009962 573
141 3300026118 Ga0207675_100001772 Ga0207675_10000177210 573
142 3300028380 Ga0268265_10000018 Ga0268265_10000018129 573
143 3300028381 Ga0268264_10013645 Ga0268264_100136457 573
144 3300037471 Ga0395905_0169687 Ga0395905_0169687_99_2033 573
145 3300048924 Ga0496121_0005584 Ga0496121_0005584_12714_14564 573
146 iso_pu_bacteria 2512564014 2512641849 573
147 iso_pu_bacteria 2738541275 2738708977 573
148 iso_pu_bacteria 2738541301 2738847402 573
149 iso_pu_bacteria 2738541304 2738863131 573
150 iso_pu_bacteria 2738543022 2739295649 573
151 iso_pu_bacteria 2738543033 2739357327 573
152 iso_pu_bacteria 2928100450 2928102265 573
153 iso_pu_bacteria 2928959182 2928961232 573
154 iso_pu_bacteria 2990265787 2990266728 573
155 iso_pu_bacteria 2993693658 2993693670 573
156 3300005289 Ga0065704_10000332 Ga0065704_1000033221 574
157 3300005347 Ga0070668_100001243 Ga0070668_10000124313 574
158 3300005353 Ga0070669_100000655 Ga0070669_1000006552 574
159 3300005367 Ga0070667_100000937 Ga0070667_10000093716 574
160 3300005843 Ga0068860_100016301 Ga0068860_1000163014 574
161 3300005844 Ga0068862_100091162 Ga0068862_1000911622 574
162 3300009092 Ga0105250_10004430 Ga0105250_100044303 574
163 3300013306 Ga0163162_10002943 Ga0163162_100029435 574
164 3300025711 Ga0207696_1002656 Ga0207696_10026565 574
165 3300025735 Ga0207713_1007002 Ga0207713_10070025 574
166 3300025972 Ga0207668_10000910 Ga0207668_100009104 574
167 3300025986 Ga0207658_10001760 Ga0207658_100017607 574
168 3300037471 Ga0395905_0020045 Ga0395905_0020045_934_2877 574
169 3300048903 Ga0496100_0011751 Ga0496100_0011751_1733_3583 574
170 3300048904 Ga0496101_0003623 Ga0496101_0003623_4429_6279 574
171 3300048905 Ga0496102_0000901 Ga0496102_0000901_22745_24595 574
172 3300048906 Ga0496103_0000056 Ga0496103_0000056_27148_28998 574
173 3300048907 Ga0496104_0000480 Ga0496104_0000480_9010_10860 574
174 3300048908 Ga0496105_0000057 Ga0496105_0000057_8833_10683 574
175 3300048915 Ga0496112_0014550 Ga0496112_0014550_4762_6612 574
176 3300048916 Ga0496113_0002848 Ga0496113_0002848_6757_8607 574
177 3300048920 Ga0496117_0000473 Ga0496117_0000473_33664_35514 574
178 3300048921 Ga0496118_0009145 Ga0496118_0009145_790_2640 574
179 3300048922 Ga0496119_0000079 Ga0496119_0000079_104750_106600 574
180 3300048923 Ga0496120_0000506 Ga0496120_0000506_7419_9269 574
181 3300048924 Ga0496121_0006529 Ga0496121_0006529_4429_6279 574
182 3300048925 Ga0496122_0003893 Ga0496122_0003893_7419_9269 574
183 3300048926 Ga0496123_0001982 Ga0496123_0001982_7419_9269 574
184 3300048927 Ga0496124_0002920 Ga0496124_0002920_17116_18966 574
185 3300048928 Ga0496125_0004607 Ga0496125_0004607_6487_8337 574
186 3300048929 Ga0496126_0000103 Ga0496126_0000103_33649_35499 574
187 3300053130 Ga0500642_0000001 Ga0500642_0000001_1034475_1036406 574
188 iso_pu_bacteria 2599185354 2600200313 574
189 3300005543 Ga0070672_100038711 Ga0070672_1000387112 575
190 3300025903 Ga0207680_10005828 Ga0207680_100058283 575
191 3300025949 Ga0207667_10150421 Ga0207667_101504212 575
192 3300025986 Ga0207658_10052722 Ga0207658_100527222 575
193 3300031731 Ga0307405_10023038 Ga0307405_100230382 575
194 3300048905 Ga0496102_0000513 Ga0496102_0000513_16155_18017 575
195 3300048906 Ga0496103_0000345 Ga0496103_0000345_24245_26107 575
196 3300048919 Ga0496116_0002116 Ga0496116_0002116_5381_7243 575
197 3300048920 Ga0496117_0001043 Ga0496117_0001043_16155_18017 575
198 3300048921 Ga0496118_0001091 Ga0496118_0001091_24265_26127 575
199 3300048927 Ga0496124_0001115 Ga0496124_0001115_24265_26127 575
200 iso_pu_bacteria 2919709256 2919710229 575
201 3300031548 Ga0307408_100057135 Ga0307408_1000571352 576
202 3300003781 Ga0055536_1001221 Ga0055536_10012219 577
203 3300006042 Ga0075368_10000122 Ga0075368_1000012218 577
204 3300006048 Ga0075363_100003672 Ga0075363_1000036724 577
205 3300006178 Ga0075367_10000636 Ga0075367_1000063614 577
206 3300025292 Ga0209676_1000819 Ga0209676_100081931 577
207 3300025298 Ga0209050_1011181 Ga0209050_10111812 577
208 3300025304 Ga0209257_1000060 Ga0209257_1000060369 577
209 3300027866 Ga0209813_10000062 Ga0209813_1000006247 577
210 3300049663 Ga0501223_000005 Ga0501223_000005_48543_50402 577
211 3300049705 Ga0501225_0007969 Ga0501225_0007969_259_2118 577
212 3300050494 nmdc:mga06z11_36_c1 nmdc:mga06z11_36_c1_38848_40710 577
213 3300050495 nmdc:mga04h51_119_c1 nmdc:mga04h51_119_c1_706_2568 577
214 3300053157 Ga0500624_000018 Ga0500624_000018_48357_50231 577
215 3300005618 Ga0068864_100000645 Ga0068864_1000006457 578
216 3300005841 Ga0068863_100000045 Ga0068863_100000045156 578
217 3300005842 Ga0068858_100002443 Ga0068858_10000244315 578
218 3300009177 Ga0105248_10020600 Ga0105248_100206007 578
219 3300025229 Ga0209147_101304 Ga0209147_1013042 578
220 3300025941 Ga0207711_10039027 Ga0207711_100390272 578
221 3300026035 Ga0207703_10000778 Ga0207703_1000077828 578
222 3300026088 Ga0207641_10000011 Ga0207641_100000117 578
223 3300026095 Ga0207676_10002078 Ga0207676_100020787 578
224 3300046558 Ga0495633_0009127 Ga0495633_0009127_1474_3369 578
225 3300005335 Ga0070666_10003028 Ga0070666_100030285 579
226 3300005356 Ga0070674_100005435 Ga0070674_1000054355 579
227 3300005367 Ga0070667_100005788 Ga0070667_1000057889 579
228 3300005842 Ga0068858_100005141 Ga0068858_1000051417 579
229 3300009177 Ga0105248_10001470 Ga0105248_1000147025 579
230 3300026142 Ga0207698_10061916 Ga0207698_100619162 579
231 3300046512 Ga0495610_0028337 Ga0495610_0028337_780_2648 579
232 3300046684 Ga0495669_0000407 Ga0495669_0000407_4389_6287 579
233 3300053087 Ga0500643_005586 Ga0500643_005586_2295_4202 579
234 iso_pu_bacteria 8024486573 8024488894 579
235 3300006195 Ga0075366_10000190 Ga0075366_1000019016 580
236 3300025903 Ga0207680_10001706 Ga0207680_100017068 580
237 3300025937 Ga0207669_10003044 Ga0207669_100030442 580
238 3300025941 Ga0207711_10001129 Ga0207711_1000112925 580
239 3300025986 Ga0207658_10028311 Ga0207658_100283112 580
240 3300026035 Ga0207703_10006362 Ga0207703_100063628 580
241 3300026078 Ga0207702_10015260 Ga0207702_100152603 580
242 3300050493 nmdc:mga0k408_18_c1 nmdc:mga0k408_18_c1_95497_97419 580
243 3300006048 Ga0075363_100001296 Ga0075363_1000012962 581
244 3300006177 Ga0075362_10000011 Ga0075362_1000001197 581
245 3300013306 Ga0163162_10039933 Ga0163162_100399333 581
246 3300050489 nmdc:mga03683_31_c1 nmdc:mga03683_31_c1_35508_37424 581
247 3300050490 nmdc:mga03n38_222_c1 nmdc:mga03n38_222_c1_7757_9673 581
248 iso_pu_bacteria 2643221663 2644354381 581
249 iso_pu_bacteria 2928968154 2928971738 581
250 iso_pu_bacteria 2808606401 2809062289 582
251 iso_pu_bacteria 2808606404 2809078371 582
252 iso_pu_bacteria 2808606405 2809082678 582
253 iso_pu_bacteria 2880518877 2880522452 582
254 3300046694 Ga0495649_0001532 Ga0495649_0001532_758_2758 584
255 3300048910 Ga0496107_0000027 Ga0496107_0000027_14753_16627 585
256 3300048924 Ga0496121_0005194 Ga0496121_0005194_3737_5611 585
257 3300025292 Ga0209676_1002344 Ga0209676_100234410 587
258 3300032004 Ga0307414_10075620 Ga0307414_100756201 587
259 3300046513 Ga0495616_0000640 Ga0495616_0000640_4542_6485 587
260 iso_pu_bacteria 2643221574 2643884681 589
261 iso_pu_bacteria 2643221699 2644547935 589
262 iso_pu_bacteria 2643221699 2644552044 589
263 3300037471 Ga0395905_0001407 Ga0395905_0001407_2863_4725 593
264 3300033180 Ga0307510_10027191 Ga0307510_100271915 594
265 3300049686 Ga0501257_000043 Ga0501257_000043_5852_7717 595
266 3300001989 JGI24739J22299_10000489 JGI24739J22299_100004892 596
267 3300005457 Ga0070662_100016443 Ga0070662_1000164433 596
268 3300005937 Ga0081455_10001021 Ga0081455_1000102122 596
269 3300025933 Ga0207706_10008344 Ga0207706_100083442 596
270 3300026041 Ga0207639_10003797 Ga0207639_1000379711 596

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00289

Biotin_carb_N

Biotin carboxylase, N-terminal domain

1

106

0.99

PF02785

Biotin_carb_C

Biotin carboxylase C-terminal domain

337

450

0.98

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

600

667

0.97

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

112

325

0.96

PF02222

ATP-grasp

ATP-grasp domain

119

294

0.81

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

118

293

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3g8d-assembly1.cif.gz_A crystal structure of the biotin carboxylase subunit, e296a mutant, of acetyl-coa carboxylase from escherichia coli 0.9695 1 445
3ouu-assembly1.cif.gz_A crystal structure of biotin carboxylase-beta-gamma-atp complex from campylobacter jejuni 0.9645 1 446
2vr1-assembly1.cif.gz_A crystal structure of biotin carboxylase from e. coli in complex with atp analog, adpcf2p. 0.9632 1 448
2vqd-assembly1.cif.gz_A crystal structure of biotin carboxylase from pseudomonas aeruginosa complexed with ampcp 0.9627 1 450
3g8d-assembly1.cif.gz_A crystal structure of the biotin carboxylase subunit, e296a mutant, of acetyl-coa carboxylase from escherichia coli 0.9618 1 445
ID Description Score Start End Superfamily
af_Q54KE6_162_230_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9952 134 202 3.30.1490.20
af_Q54KE6_162_230_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.9811 134 202 3.30.1490.20
af_A0A2R8PV58_38_157_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9785 14 127 3.40.50.20
af_P9WPQ3_1_451_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9691 1 449 3.30.470.20
2vqdA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9683 1 85 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A7J9W0A8-F1-model_v4 biotin carboxylase (EC 6.3.4.14) 1.002 1 71 GO:0005524
GO:0016874
AF-A0A323V7T1-F1-model_v4 biotin carboxylase (EC 6.3.4.14) 1 2 79 GO:0005524
GO:0016874
AF-A0A3B8PC23-F1-model_v4 deleted 0.9976 1 66
AF-R1C8W8-F1-model_v4 Biotin carboxylation domain-containing protein 0.9968 1 75 GO:0005524
GO:0016874
AF-A0A3M1P1Z5-F1-model_v4 Acetyl-CoA carboxylase biotin carboxylase subunit (EC 6.4.1.2) 0.9967 2 74 GO:0003989
GO:0005524

Feature Viewer

pLDDT pTM Quality
87.53 0.84 High
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Predicted Structure (AlphaFold2)

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