F377316

General Info

Members Datasets Scaffolds Average Seq Length
270 169 250 459

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2786546517|2787434005
Length 527
Sequence TRILRIIAATLLAATAAHAGDKPEPPRIGPMRQREDYSYLANPDRRTGAWWEPLKYVPLGESPLSHAPEHPFLTFGGEARVRYEWLQGSDFGAGTQDSGGYLLTRALPYASLTVPRLLGHGDGDAVSLLLFGQAMIAHNSFDARGPGPVDKEEFDALQAFAQITIPLHTGDANASSLLTLQGGRQMISYGTERLLGTRYGPNIPLSFDGGIARWRNAQWDVSAFYLLPVKVDPEAWQNQSSTQRQVWSLYATRKFGDQREAGSLVADPRSESGSHPPAGSSVTLASADLYYIGYYNGSARFNAGSGREQRHTMGARFFGSRKTQKFGVLDWNYEGMLQAGTFDPTSSSPAGSGAGASSDILAWSIGTETGYTFPLPLSPRIFLRANAISGDLDASDQTLGTFNPLFPKGKYFGELTPVGPYNLLNMQAGVNLNITSTLALTLQGGPYWRYSTQDAVYGVAGNILRASDGSSNSQDIGSQVEIVAEWKPRREVSYLASYSQFMPGDFLKETGPAQVIHYVAFEMQLQF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
3 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
4 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
5 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
6 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
7 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
8 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
9 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
10 2738543009 Luteibacter sp. OK325 Isolate Unclassified
11 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
12 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
13 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
14 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
15 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
16 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
17 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
18 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
19 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
20 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
21 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
22 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
23 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
24 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
25 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
26 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
27 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
28 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
29 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
32 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
53 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
54 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
66 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
97 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
98 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
99 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
102 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
103 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
104 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
105 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
106 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
107 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
108 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
109 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
110 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
111 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
114 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
115 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
119 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
120 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
121 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
122 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
155 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
159 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
160 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
161 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
162 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
166 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
167 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
168 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
169 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.22
Metatranscriptomes 0.37
Isolates 7.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.81
Nodule 0.37
Rhizoplane 4.81
Rhizosphere 56.67
Stem 0
Stem Tuber 0
Unclassified 23.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2033581 2162886007 Bacteria 6208
2 SwRhRL2b_contig_3167996 2162886007 Bacteria 6190
3 SwRhRL2b_contig_795598 2162886007 Bacteria 22378
4 JGI24741J21665_1000164 3300001915 Bacteria 19069
5 JGI24740J21852_10010640 3300001979 Bacteria 3533
6 JGI24739J22299_10002282 3300001989 Bacteria 7371
7 JGI24735J21928_10001651 3300002067 Bacteria 7907
8 JGI25153J46596_10000155 3300003215 Bacteria 68695
9 rootL2_10167899 3300003322 Bacteria 2992
10 Ga0055526_1000871 3300003771 Bacteria 22528
11 Ga0055530_10005328 3300003791 Bacteria 6164
12 Ga0055530_10012529 3300003791 Bacteria 2950
13 Ga0055530_10020460 3300003791 Bacteria 1976
14 Ga0055540_1002935 3300003792 Bacteria 8589
15 Ga0055531_10007135 3300003794 Bacteria 6164
16 Ga0055531_10007149 3300003794 Bacteria 6155
17 Ga0065704_10000370 3300005289 Bacteria 38135
18 Ga0065704_10070775 3300005289 Bacteria 16319
19 Ga0070658_10145668 3300005327 Bacteria 1980
20 Ga0070661_100094107 3300005344 Bacteria 2220
21 Ga0070668_100000228 3300005347 Bacteria 36392
22 Ga0070668_100000593 3300005347 Bacteria 24257
23 Ga0070668_100002599 3300005347 Bacteria 13266
24 Ga0070668_100006472 3300005347 Bacteria 8685
25 Ga0070668_100006670 3300005347 Bacteria 8556
26 Ga0070668_100024226 3300005347 Bacteria 4596
27 Ga0070669_100000713 3300005353 Bacteria 24336
28 Ga0070671_100002171 3300005355 Bacteria 15141
29 Ga0070667_100010219 3300005367 Bacteria 7754
30 Ga0070667_100048472 3300005367 Bacteria 3575
31 Ga0070663_100007443 3300005455 Bacteria 6660
32 Ga0068853_100000190 3300005539 Bacteria 43364
33 Ga0070665_100000076 3300005548 Bacteria 189228
34 Ga0070665_100051591 3300005548 Bacteria 4125
35 Ga0070664_100073305 3300005564 Bacteria 2937
36 Ga0068857_100014850 3300005577 Bacteria 6791
37 Ga0068854_100009134 3300005578 Bacteria 6393
38 Ga0068852_100009378 3300005616 Bacteria 7267
39 Ga0068851_10054873 3300005834 Bacteria 2030
40 Ga0068863_100001122 3300005841 Bacteria 26742
41 Ga0068863_100006366 3300005841 Bacteria 11581
42 Ga0068858_100106364 3300005842 Bacteria 2619
43 Ga0068858_100111240 3300005842 Bacteria 2558
44 Ga0068860_100004569 3300005843 Bacteria 14127
45 Ga0068860_100087304 3300005843 Bacteria 2969
46 Ga0068862_100006732 3300005844 Bacteria 9529
47 Ga0081540_1029088 3300005983 Bacteria 3087
48 Ga0081539_10023286 3300005985 Bacteria 4062
49 Ga0075368_10000069 3300006042 Bacteria 24490
50 Ga0075368_10031940 3300006042 Bacteria 2043
51 Ga0075367_10000069 3300006178 Bacteria 25974
52 Ga0079104_1021499 3300006946 Bacteria 1755
53 Ga0105251_10000455 3300009011 Bacteria 39491
54 Ga0105251_10008210 3300009011 Bacteria 6311
55 Ga0105251_10008749 3300009011 Bacteria 6070
56 Ga0105250_10000686 3300009092 Bacteria 21194
57 Ga0105241_10005020 3300009174 Bacteria 9771
58 Ga0105248_10022978 3300009177 Bacteria 6926
59 Ga0105248_10076491 3300009177 Bacteria 3762
60 Ga0105248_10111374 3300009177 Bacteria 3087
61 Ga0105237_10006467 3300009545 Bacteria 12990
62 Ga0105237_10086362 3300009545 Bacteria 3127
63 Ga0105249_10027010 3300009553 Bacteria 5178
64 Ga0105148_100306 3300009978 Bacteria 6352
65 Ga0105239_10159270 3300010375 Bacteria 2521
66 Ga0163162_10003446 3300013306 Bacteria 15107
67 Ga0183369_1021 3300015685 Bacteria 110842
68 Ga0163161_10022913 3300017792 Bacteria 4400
69 Ga0209147_100356 3300025229 Bacteria 32955
70 Ga0207425_1000027 3300025245 Bacteria 299995
71 Ga0209565_1012258 3300025263 Bacteria 2053
72 Ga0209676_1001731 3300025292 Bacteria 18719
73 Ga0209676_1004647 3300025292 Bacteria 7545
74 Ga0209564_1000996 3300025295 Bacteria 35381
75 Ga0209758_1000009 3300025297 Bacteria 1123483
76 Ga0209758_1014222 3300025297 Bacteria 4254
77 Ga0209050_1000005 3300025298 Bacteria 1557793
78 Ga0209050_1000299 3300025298 Bacteria 104017
79 Ga0209050_1000644 3300025298 Bacteria 54118
80 Ga0209050_1005950 3300025298 Bacteria 7418
81 Ga0209051_1000152 3300025303 Bacteria 131355
82 Ga0209257_1000772 3300025304 Bacteria 47390
83 Ga0209257_1000918 3300025304 Bacteria 41006
84 Ga0209257_1001554 3300025304 Bacteria 26629
85 Ga0207696_1000594 3300025711 Bacteria 27587
86 Ga0207713_1000631 3300025735 Bacteria 34271
87 Ga0207713_1013367 3300025735 Bacteria 4331
88 Ga0207671_10003522 3300025914 Bacteria 15538
89 Ga0207671_10004959 3300025914 Bacteria 12478
90 Ga0207671_10163882 3300025914 Bacteria 1723
91 Ga0207681_10000235 3300025923 Bacteria 42936
92 Ga0207644_10000200 3300025931 Bacteria 42321
93 Ga0207711_10020319 3300025941 Bacteria 5536
94 Ga0207668_10000970 3300025972 Bacteria 17232
95 Ga0207668_10001514 3300025972 Bacteria 13578
96 Ga0207668_10001823 3300025972 Bacteria 12437
97 Ga0207668_10004594 3300025972 Bacteria 8121
98 Ga0207668_10005180 3300025972 Bacteria 7666
99 Ga0207640_10005042 3300025981 Bacteria 7184
100 Ga0207640_10034333 3300025981 Bacteria 3165
101 Ga0207658_10001484 3300025986 Bacteria 18219
102 Ga0207658_10007485 3300025986 Bacteria 7439
103 Ga0207703_10029979 3300026035 Bacteria 4296
104 Ga0207639_10001921 3300026041 Bacteria 13959
105 Ga0207639_10006379 3300026041 Bacteria 8012
106 Ga0207702_10005889 3300026078 Bacteria 10661
107 Ga0207641_10000616 3300026088 Bacteria 38941
108 Ga0207641_10017256 3300026088 Bacteria 5909
109 Ga0207674_10018053 3300026116 Bacteria 7684
110 Ga0207674_10155521 3300026116 Bacteria 2242
111 Ga0209813_10000080 3300027866 Bacteria 35297
112 Ga0268266_10000347 3300028379 Bacteria 72151
113 Ga0268265_10073305 3300028380 Bacteria 2673
114 Ga0268264_10039074 3300028381 Bacteria 3920
115 Ga0268256_1009686 3300030500 Bacteria 3171
116 Ga0307408_100034806 3300031548 Bacteria 3530
117 Ga0307406_10015690 3300031901 Bacteria 4390
118 Ga0307412_10001783 3300031911 Bacteria 11898
119 Ga0307412_10003458 3300031911 Bacteria 8779
120 Ga0307414_10034556 3300032004 Bacteria 3354
121 Ga0307415_100183038 3300032126 Bacteria 1646
122 Ga0237819_01302 3300038705 Bacteria 6713
123 Ga0451807_1989966 3300041486 Bacteria 2694
124 Ga0495627_000103 3300046453 Bacteria 104335
125 Ga0495627_000206 3300046453 Bacteria 63802
126 Ga0495627_001369 3300046453 Bacteria 14542
127 Ga0495638_0000305 3300046460 Bacteria 63286
128 Ga0495650_0000960 3300046471 Bacteria 33104
129 Ga0495584_0008409 3300046491 Bacteria 5345
130 Ga0495596_0000511 3300046500 Bacteria 24699
131 Ga0495596_0000692 3300046500 Bacteria 20936
132 Ga0495607_0036553 3300046501 Bacteria 2957
133 Ga0495583_0000710 3300046506 Bacteria 42765
134 Ga0495606_0016687 3300046507 Bacteria 5586
135 Ga0495610_0000013 3300046512 Bacteria 465872
136 Ga0495610_0001359 3300046512 Bacteria 21721
137 Ga0495610_0002305 3300046512 Bacteria 16131
138 Ga0495620_0032374 3300046515 Bacteria 2383
139 Ga0495632_0000753 3300046519 Bacteria 29159
140 Ga0495632_0001534 3300046519 Bacteria 19078
141 Ga0495632_0008113 3300046519 Bacteria 6497
142 Ga0495637_0000728 3300046520 Bacteria 22468
143 Ga0495637_0047233 3300046520 Bacteria 1818
144 Ga0495643_0000010 3300046522 Bacteria 341431
145 Ga0495643_0000080 3300046522 Bacteria 161872
146 Ga0495643_0058628 3300046522 Bacteria 2048
147 Ga0495648_0000235 3300046524 Bacteria 63436
148 Ga0495648_0021369 3300046524 Bacteria 4482
149 Ga0495648_0038217 3300046524 Bacteria 3073
150 Ga0495663_0000144 3300046525 Bacteria 29159
151 Ga0495609_0004869 3300046538 Bacteria 7224
152 Ga0495633_0000211 3300046558 Bacteria 73547
153 Ga0495633_0003080 3300046558 Bacteria 11341
154 Ga0495625_0009754 3300046660 Bacteria 7992
155 Ga0495661_0052179 3300046665 Bacteria 2465
156 Ga0495671_0000014 3300046692 Bacteria 341431
157 Ga0495671_0000020 3300046692 Bacteria 268306
158 Ga0495673_0000316 3300047469 Bacteria 62814
159 Ga0495673_0029307 3300047469 Bacteria 2599
160 Ga0495681_0000017 3300047470 Bacteria 178067
161 Ga0495681_0000022 3300047470 Bacteria 165281
162 Ga0495681_0001063 3300047470 Bacteria 20955
163 Ga0495686_0002426 3300047472 Bacteria 17624
164 Ga0495686_0006421 3300047472 Bacteria 9005
165 Ga0495686_0031986 3300047472 Bacteria 3407
166 Ga0495686_0087663 3300047472 Bacteria 1893
167 Ga0495615_0001307 3300048090 Bacteria 3654
168 Ga0496101_0061074 3300048904 Bacteria 2736
169 Ga0496102_0000392 3300048905 Bacteria 51401
170 Ga0496103_0000121 3300048906 Bacteria 84736
171 Ga0496104_0000308 3300048907 Bacteria 43575
172 Ga0496107_0020892 3300048910 Bacteria 4628
173 Ga0496108_0021127 3300048911 Bacteria 5348
174 Ga0496111_0022210 3300048914 Bacteria 4439
175 Ga0496112_0036846 3300048915 Bacteria 4772
176 Ga0496113_0000049 3300048916 Bacteria 50286
177 Ga0496116_0000039 3300048919 Bacteria 349134
178 Ga0496116_0027957 3300048919 Bacteria 4096
179 Ga0496117_0007029 3300048920 Bacteria 11141
180 Ga0496117_0008642 3300048920 Bacteria 9639
181 Ga0496117_0011703 3300048920 Bacteria 7826
182 Ga0496117_0013526 3300048920 Bacteria 7113
183 Ga0496118_0000122 3300048921 Bacteria 137396
184 Ga0496118_0000840 3300048921 Bacteria 48853
185 Ga0496118_0000913 3300048921 Bacteria 46178
186 Ga0496118_0013234 3300048921 Bacteria 7825
187 Ga0496118_0017879 3300048921 Bacteria 6432
188 Ga0496119_0000969 3300048922 Bacteria 36852
189 Ga0496119_0068659 3300048922 Bacteria 2086
190 Ga0496120_0003332 3300048923 Bacteria 14756
191 Ga0496120_0013068 3300048923 Bacteria 5614
192 Ga0496121_0000670 3300048924 Bacteria 63957
193 Ga0496121_0006610 3300048924 Bacteria 14303
194 Ga0496121_0025112 3300048924 Bacteria 5670
195 Ga0496122_0000112 3300048925 Bacteria 187099
196 Ga0496122_0000514 3300048925 Bacteria 80001
197 Ga0496122_0001847 3300048925 Bacteria 32290
198 Ga0496122_0002778 3300048925 Bacteria 24087
199 Ga0496122_0025341 3300048925 Bacteria 5154
200 Ga0496122_0053182 3300048925 Bacteria 3055
201 Ga0496123_0000190 3300048926 Bacteria 124705
202 Ga0496123_0000462 3300048926 Bacteria 71306
203 Ga0496123_0007535 3300048926 Bacteria 10206
204 Ga0496123_0008273 3300048926 Bacteria 9585
205 Ga0496123_0015683 3300048926 Bacteria 6200
206 Ga0496123_0033896 3300048926 Bacteria 3667
207 Ga0496123_0065555 3300048926 Bacteria 2307
208 Ga0496123_0117321 3300048926 Bacteria 1505
209 Ga0496124_0000110 3300048927 Bacteria 166321
210 Ga0496124_0000129 3300048927 Bacteria 156648
211 Ga0496124_0000316 3300048927 Bacteria 89321
212 Ga0496124_0000686 3300048927 Bacteria 55722
213 Ga0496124_0001387 3300048927 Bacteria 36306
214 Ga0496124_0004156 3300048927 Bacteria 17086
215 Ga0496124_0009481 3300048927 Bacteria 10025
216 Ga0496124_0013794 3300048927 Bacteria 7861
217 Ga0496124_0024713 3300048927 Bacteria 5456
218 Ga0496124_0064650 3300048927 Bacteria 3053
219 Ga0496124_0089829 3300048927 Bacteria 2507
220 Ga0496124_0114250 3300048927 Bacteria 2168
221 Ga0496125_0004041 3300048928 Bacteria 17201
222 Ga0496125_0012096 3300048928 Bacteria 8586
223 Ga0496125_0023777 3300048928 Bacteria 5649
224 Ga0496126_0000308 3300048929 Bacteria 103936
225 Ga0496126_0033548 3300048929 Bacteria 4828
226 Ga0501335_000138 3300049551 Bacteria 3665
227 Ga0501032_0036954 3300049569 Bacteria 3332
228 Ga0501033_0006471 3300049570 Bacteria 9165
229 Ga0501036_0007146 3300049572 Bacteria 9093
230 Ga0501037_0004432 3300049573 Bacteria 10199
231 Ga0501038_0004818 3300049574 Bacteria 12533
232 Ga0501046_0003790 3300049580 Bacteria 13841
233 Ga0501047_0004246 3300049581 Bacteria 13493
234 Ga0501048_0007716 3300049582 Bacteria 8155
235 Ga0501070_0015007 3300049586 Bacteria 6518
236 Ga0501073_0072863 3300049589 Bacteria 2392
237 Ga0501236_002942 3300049670 Bacteria 1976
238 Ga0501245_002777 3300049708 Bacteria 2350
239 nmdc:mga0k408_16507_c1 3300050493 Bacteria 4097
240 nmdc:mga06z11_40_c1 3300050494 Bacteria 53122
241 nmdc:mga04h51_98_c1 3300050495 Bacteria 26290
242 Ga0500643_000490 3300053087 Bacteria 28839
243 Ga0500556_0003416 3300053104 Unclassified 4680
244 Ga0500618_008154 3300053125 Bacteria 2944
245 Ga0500559_0000425 3300053136 Bacteria 29971
246 Ga0500559_0029531 3300053136 Bacteria 2349
247 Ga0500616_0000016 3300053153 Bacteria 627087
248 Ga0500622_0056994 3300053156 Bacteria 2000
249 Ga0500645_001610 3300053730 Bacteria 11197
250 Ga0500661_000021 3300055283 Bacteria 25567

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005983 Ga0081540_1029088 Ga0081540_10290881 418
2 3300006946 Ga0079104_1021499 Ga0079104_10214992 421
3 3300003322 rootL2_10167899 rootL2_101678992 422
4 3300053156 Ga0500622_0056994 Ga0500622_0056994_292_1629 430
5 3300046453 Ga0495627_001369 Ga0495627_001369_11641_12993 435
6 3300046512 Ga0495610_0002305 Ga0495610_0002305_1328_2680 435
7 3300046520 Ga0495637_0047233 Ga0495637_0047233_343_1668 435
8 3300046665 Ga0495661_0052179 Ga0495661_0052179_1051_2403 435
9 3300047470 Ga0495681_0000022 Ga0495681_0000022_11668_13020 435
10 iso_pu_bacteria 2738543009 2739226456 436
11 iso_pu_bacteria 2751185897 2753764069 436
12 3300005985 Ga0081539_10023286 Ga0081539_100232863 437
13 3300009177 Ga0105248_10111374 Ga0105248_101113743 437
14 3300048907 Ga0496104_0000308 Ga0496104_0000308_3909_5222 437
15 3300048910 Ga0496107_0020892 Ga0496107_0020892_256_1569 437
16 3300048915 Ga0496112_0036846 Ga0496112_0036846_1696_3009 437
17 3300048921 Ga0496118_0000840 Ga0496118_0000840_28216_29529 437
18 3300048922 Ga0496119_0000969 Ga0496119_0000969_29464_30777 437
19 3300048923 Ga0496120_0003332 Ga0496120_0003332_7369_8682 437
20 3300048924 Ga0496121_0006610 Ga0496121_0006610_5534_6847 437
21 3300048925 Ga0496122_0001847 Ga0496122_0001847_24902_26215 437
22 3300048926 Ga0496123_0007535 Ga0496123_0007535_3189_4502 437
23 3300048928 Ga0496125_0012096 Ga0496125_0012096_5705_7018 437
24 3300048929 Ga0496126_0000308 Ga0496126_0000308_48004_49317 437
25 3300003791 Ga0055530_10005328 Ga0055530_100053282 438
26 3300003792 Ga0055540_1002935 Ga0055540_10029355 438
27 3300003794 Ga0055531_10007135 Ga0055531_100071352 438
28 3300025292 Ga0209676_1001731 Ga0209676_100173113 438
29 3300025298 Ga0209050_1000005 Ga0209050_10000051243 438
30 3300025303 Ga0209051_1000152 Ga0209051_100015270 438
31 3300048926 Ga0496123_0065555 Ga0496123_0065555_960_2282 438
32 3300048927 Ga0496124_0004156 Ga0496124_0004156_1729_3051 438
33 3300048927 Ga0496124_0089829 Ga0496124_0089829_590_1996 438
34 3300005841 Ga0068863_100006366 Ga0068863_10000636615 439
35 3300005843 Ga0068860_100004569 Ga0068860_1000045691 439
36 3300026088 Ga0207641_10000616 Ga0207641_100006161 439
37 3300047472 Ga0495686_0002426 Ga0495686_0002426_1577_2938 441
38 3300047472 Ga0495686_0087663 Ga0495686_0087663_43_1404 441
39 3300048926 Ga0496123_0117321 Ga0496123_0117321_57_1436 441
40 3300048927 Ga0496124_0024713 Ga0496124_0024713_3366_4745 441
41 3300005347 Ga0070668_100000228 Ga0070668_10000022832 442
42 3300025304 Ga0209257_1000772 Ga0209257_100077222 442
43 3300025972 Ga0207668_10001514 Ga0207668_1000151413 442
44 3300025986 Ga0207658_10001484 Ga0207658_100014847 442
45 3300048921 Ga0496118_0000122 Ga0496118_0000122_2570_3898 442
46 3300048927 Ga0496124_0009481 Ga0496124_0009481_2276_3604 442
47 iso_pu_bacteria 8054302542 8054306521 442
48 3300038705 Ga0237819_01302 Ga0237819_01302_2239_3621 443
49 3300048090 Ga0495615_0001307 Ga0495615_0001307_876_2207 443
50 3300048925 Ga0496122_0053182 Ga0496122_0053182_290_1633 443
51 3300048926 Ga0496123_0033896 Ga0496123_0033896_1439_2782 443
52 iso_pu_bacteria 2848858292 2848862986 443
53 3300005347 Ga0070668_100024226 Ga0070668_1000242265 444
54 3300025972 Ga0207668_10005180 Ga0207668_100051805 444
55 3300048925 Ga0496122_0025341 Ga0496122_0025341_1464_2858 444
56 3300053136 Ga0500559_0029531 Ga0500559_0029531_302_1657 444
57 iso_pu_bacteria 2597490356 2599104694 444
58 iso_pu_bacteria 2846952575 2846955551 444
59 3300025304 Ga0209257_1001554 Ga0209257_100155424 445
60 3300046500 Ga0495596_0000692 Ga0495596_0000692_10978_12315 445
61 3300046501 Ga0495607_0036553 Ga0495607_0036553_1028_2365 445
62 3300046507 Ga0495606_0016687 Ga0495606_0016687_3544_4881 445
63 3300046519 Ga0495632_0008113 Ga0495632_0008113_1232_2737 445
64 3300046522 Ga0495643_0058628 Ga0495643_0058628_700_2037 445
65 3300046538 Ga0495609_0004869 Ga0495609_0004869_2955_4292 445
66 3300048927 Ga0496124_0000129 Ga0496124_0000129_25455_26954 445
67 3300053087 Ga0500643_000490 Ga0500643_000490_2824_4161 445
68 3300053136 Ga0500559_0000425 Ga0500559_0000425_3835_5172 445
69 3300053730 Ga0500645_001610 Ga0500645_001610_8840_10216 445
70 3300055283 Ga0500661_000021 Ga0500661_000021_1373_2710 445
71 iso_pu_bacteria 2786546517 2787434005 445
72 3300003791 Ga0055530_10012529 Ga0055530_100125292 446
73 3300005347 Ga0070668_100000593 Ga0070668_10000059329 446
74 3300017792 Ga0163161_10022913 Ga0163161_100229133 446
75 3300025298 Ga0209050_1000299 Ga0209050_10002994 446
76 3300025972 Ga0207668_10000970 Ga0207668_100009702 446
77 3300047472 Ga0495686_0031986 Ga0495686_0031986_777_2150 446
78 3300048920 Ga0496117_0013526 Ga0496117_0013526_2801_4237 446
79 3300048921 Ga0496118_0000913 Ga0496118_0000913_15857_17293 446
80 3300048923 Ga0496120_0013068 Ga0496120_0013068_971_2407 446
81 3300048927 Ga0496124_0000686 Ga0496124_0000686_14521_15957 446
82 3300053104 Ga0500556_0003416 Ga0500556_0003416_463_1911 446
83 iso_pu_bacteria 8054002106 8054003608 446
84 3300015685 Ga0183369_1021 Ga0183369_102139 447
85 3300046453 Ga0495627_000103 Ga0495627_000103_99010_100473 447
86 3300046460 Ga0495638_0000305 Ga0495638_0000305_43275_44705 447
87 3300046522 Ga0495643_0000080 Ga0495643_0000080_107741_109084 447
88 3300046524 Ga0495648_0000235 Ga0495648_0000235_18765_20195 447
89 3300048927 Ga0496124_0000110 Ga0496124_0000110_49440_50918 447
90 3300053125 Ga0500618_008154 Ga0500618_008154_29_1435 447
91 3300053153 Ga0500616_0000016 Ga0500616_0000016_540336_541775 447
92 3300047469 Ga0495673_0029307 Ga0495673_0029307_837_2246 448
93 3300048925 Ga0496122_0000514 Ga0496122_0000514_19083_20471 448
94 3300048926 Ga0496123_0000462 Ga0496123_0000462_19164_20552 448
95 3300050493 nmdc:mga0k408_16507_c1 nmdc:mga0k408_16507_c1_1158_2525 448
96 iso_pu_bacteria 2512564014 2512645060 448
97 iso_pu_bacteria 2643221541 2643727228 448
98 iso_pu_bacteria 2643221606 2644041611 448
99 iso_pu_bacteria 2643221671 2644395152 448
100 2162886007 SwRhRL2b_contig_3167996 SwRhRL2b_0137.00005340 449
101 2162886007 SwRhRL2b_contig_795598 SwRhRL2b_0486.00005440 449
102 3300001915 JGI24741J21665_1000164 JGI24741J21665_100016414 449
103 3300001979 JGI24740J21852_10010640 JGI24740J21852_100106404 449
104 3300001989 JGI24739J22299_10002282 JGI24739J22299_100022822 449
105 3300002067 JGI24735J21928_10001651 JGI24735J21928_100016513 449
106 3300003215 JGI25153J46596_10000155 JGI25153J46596_1000015532 449
107 3300003771 Ga0055526_1000871 Ga0055526_100087116 449
108 3300003791 Ga0055530_10020460 Ga0055530_100204602 449
109 3300003794 Ga0055531_10007149 Ga0055531_100071492 449
110 3300005289 Ga0065704_10000370 Ga0065704_1000037012 449
111 3300005289 Ga0065704_10070775 Ga0065704_1007077512 449
112 3300005327 Ga0070658_10145668 Ga0070658_101456681 449
113 3300005344 Ga0070661_100094107 Ga0070661_1000941072 449
114 3300005347 Ga0070668_100002599 Ga0070668_10000259912 449
115 3300005347 Ga0070668_100006670 Ga0070668_1000066703 449
116 3300005353 Ga0070669_100000713 Ga0070669_10000071323 449
117 3300005355 Ga0070671_100002171 Ga0070671_1000021716 449
118 3300005367 Ga0070667_100010219 Ga0070667_1000102194 449
119 3300005367 Ga0070667_100048472 Ga0070667_1000484724 449
120 3300005455 Ga0070663_100007443 Ga0070663_1000074433 449
121 3300005539 Ga0068853_100000190 Ga0068853_10000019010 449
122 3300005548 Ga0070665_100000076 Ga0070665_10000007626 449
123 3300005548 Ga0070665_100051591 Ga0070665_1000515913 449
124 3300005564 Ga0070664_100073305 Ga0070664_1000733053 449
125 3300005577 Ga0068857_100014850 Ga0068857_1000148507 449
126 3300005616 Ga0068852_100009378 Ga0068852_1000093783 449
127 3300005834 Ga0068851_10054873 Ga0068851_100548731 449
128 3300005841 Ga0068863_100001122 Ga0068863_10000112220 449
129 3300005842 Ga0068858_100106364 Ga0068858_1001063643 449
130 3300005842 Ga0068858_100111240 Ga0068858_1001112403 449
131 3300005843 Ga0068860_100087304 Ga0068860_1000873043 449
132 3300005844 Ga0068862_100006732 Ga0068862_1000067328 449
133 3300006042 Ga0075368_10000069 Ga0075368_1000006910 449
134 3300006042 Ga0075368_10031940 Ga0075368_100319403 449
135 3300006178 Ga0075367_10000069 Ga0075367_1000006912 449
136 3300009011 Ga0105251_10000455 Ga0105251_1000045515 449
137 3300009011 Ga0105251_10008210 Ga0105251_100082103 449
138 3300009092 Ga0105250_10000686 Ga0105250_1000068613 449
139 3300009174 Ga0105241_10005020 Ga0105241_100050204 449
140 3300009177 Ga0105248_10022978 Ga0105248_100229786 449
141 3300009177 Ga0105248_10076491 Ga0105248_100764912 449
142 3300009545 Ga0105237_10006467 Ga0105237_100064678 449
143 3300009553 Ga0105249_10027010 Ga0105249_100270102 449
144 3300009978 Ga0105148_100306 Ga0105148_1003064 449
145 3300010375 Ga0105239_10159270 Ga0105239_101592703 449
146 3300013306 Ga0163162_10003446 Ga0163162_1000344615 449
147 3300025229 Ga0209147_100356 Ga0209147_10035624 449
148 3300025245 Ga0207425_1000027 Ga0207425_1000027184 449
149 3300025263 Ga0209565_1012258 Ga0209565_10122583 449
150 3300025292 Ga0209676_1004647 Ga0209676_10046477 449
151 3300025295 Ga0209564_1000996 Ga0209564_100099631 449
152 3300025297 Ga0209758_1000009 Ga0209758_100000959 449
153 3300025297 Ga0209758_1014222 Ga0209758_10142222 449
154 3300025298 Ga0209050_1005950 Ga0209050_10059507 449
155 3300025304 Ga0209257_1000918 Ga0209257_100091819 449
156 3300025711 Ga0207696_1000594 Ga0207696_100059429 449
157 3300025735 Ga0207713_1000631 Ga0207713_10006317 449
158 3300025735 Ga0207713_1013367 Ga0207713_10133673 449
159 3300025914 Ga0207671_10003522 Ga0207671_1000352211 449
160 3300025914 Ga0207671_10163882 Ga0207671_101638822 449
161 3300025923 Ga0207681_10000235 Ga0207681_1000023517 449
162 3300025931 Ga0207644_10000200 Ga0207644_1000020033 449
163 3300025941 Ga0207711_10020319 Ga0207711_100203193 449
164 3300025972 Ga0207668_10001823 Ga0207668_1000182311 449
165 3300025972 Ga0207668_10004594 Ga0207668_100045948 449
166 3300025981 Ga0207640_10034333 Ga0207640_100343332 449
167 3300025986 Ga0207658_10007485 Ga0207658_100074854 449
168 3300026035 Ga0207703_10029979 Ga0207703_100299793 449
169 3300026041 Ga0207639_10001921 Ga0207639_1000192110 449
170 3300026041 Ga0207639_10006379 Ga0207639_100063793 449
171 3300026078 Ga0207702_10005889 Ga0207702_100058895 449
172 3300026088 Ga0207641_10017256 Ga0207641_100172564 449
173 3300026116 Ga0207674_10018053 Ga0207674_100180533 449
174 3300026116 Ga0207674_10155521 Ga0207674_101555212 449
175 3300027866 Ga0209813_10000080 Ga0209813_1000008021 449
176 3300028379 Ga0268266_10000347 Ga0268266_1000034758 449
177 3300028380 Ga0268265_10073305 Ga0268265_100733052 449
178 3300028381 Ga0268264_10039074 Ga0268264_100390744 449
179 3300030500 Ga0268256_1009686 Ga0268256_10096861 449
180 3300031548 Ga0307408_100034806 Ga0307408_1000348063 449
181 3300031901 Ga0307406_10015690 Ga0307406_100156904 449
182 3300031911 Ga0307412_10001783 Ga0307412_100017836 449
183 3300032004 Ga0307414_10034556 Ga0307414_100345563 449
184 3300032126 Ga0307415_100183038 Ga0307415_1001830381 449
185 3300046453 Ga0495627_000206 Ga0495627_000206_44905_46308 449
186 3300046471 Ga0495650_0000960 Ga0495650_0000960_2740_4197 449
187 3300046491 Ga0495584_0008409 Ga0495584_0008409_1748_3124 449
188 3300046500 Ga0495596_0000511 Ga0495596_0000511_8362_9837 449
189 3300046506 Ga0495583_0000710 Ga0495583_0000710_19939_21354 449
190 3300046512 Ga0495610_0000013 Ga0495610_0000013_242266_243717 449
191 3300046512 Ga0495610_0001359 Ga0495610_0001359_14573_16009 449
192 3300046515 Ga0495620_0032374 Ga0495620_0032374_91_1542 449
193 3300046519 Ga0495632_0000753 Ga0495632_0000753_8057_9433 449
194 3300046519 Ga0495632_0001534 Ga0495632_0001534_789_2219 449
195 3300046520 Ga0495637_0000728 Ga0495637_0000728_18677_20053 449
196 3300046522 Ga0495643_0000010 Ga0495643_0000010_21990_23366 449
197 3300046524 Ga0495648_0021369 Ga0495648_0021369_2903_4306 449
198 3300046524 Ga0495648_0038217 Ga0495648_0038217_1132_2508 449
199 3300046525 Ga0495663_0000144 Ga0495663_0000144_8057_9433 449
200 3300046558 Ga0495633_0000211 Ga0495633_0000211_33217_34593 449
201 3300046558 Ga0495633_0003080 Ga0495633_0003080_1909_3285 449
202 3300046660 Ga0495625_0009754 Ga0495625_0009754_2869_4245 449
203 3300046692 Ga0495671_0000014 Ga0495671_0000014_21990_23366 449
204 3300046692 Ga0495671_0000020 Ga0495671_0000020_248208_249623 449
205 3300047469 Ga0495673_0000316 Ga0495673_0000316_18684_20099 449
206 3300047470 Ga0495681_0000017 Ga0495681_0000017_28977_30434 449
207 3300047470 Ga0495681_0001063 Ga0495681_0001063_18178_19554 449
208 3300047472 Ga0495686_0006421 Ga0495686_0006421_6649_8025 449
209 3300048904 Ga0496101_0061074 Ga0496101_0061074_849_2228 449
210 3300048905 Ga0496102_0000392 Ga0496102_0000392_4805_6166 449
211 3300048906 Ga0496103_0000121 Ga0496103_0000121_46161_47522 449
212 3300048916 Ga0496113_0000049 Ga0496113_0000049_11612_12973 449
213 3300048919 Ga0496116_0000039 Ga0496116_0000039_1934_3313 449
214 3300048919 Ga0496116_0027957 Ga0496116_0027957_1617_2978 449
215 3300048920 Ga0496117_0007029 Ga0496117_0007029_9259_10620 449
216 3300048920 Ga0496117_0008642 Ga0496117_0008642_5793_7154 449
217 3300048920 Ga0496117_0011703 Ga0496117_0011703_1334_2695 449
218 3300048921 Ga0496118_0013234 Ga0496118_0013234_4374_5735 449
219 3300048921 Ga0496118_0017879 Ga0496118_0017879_3479_4870 449
220 3300048924 Ga0496121_0025112 Ga0496121_0025112_2600_3961 449
221 3300048925 Ga0496122_0000112 Ga0496122_0000112_100855_102255 449
222 3300048926 Ga0496123_0000190 Ga0496123_0000190_78731_80131 449
223 3300048926 Ga0496123_0008273 Ga0496123_0008273_57_1436 449
224 3300048927 Ga0496124_0013794 Ga0496124_0013794_3727_5088 449
225 3300048927 Ga0496124_0064650 Ga0496124_0064650_402_1763 449
226 3300048927 Ga0496124_0114250 Ga0496124_0114250_73_1458 449
227 3300048928 Ga0496125_0023777 Ga0496125_0023777_1747_3159 449
228 3300049551 Ga0501335_000138 Ga0501335_000138_1692_3053 449
229 3300049589 Ga0501073_0072863 Ga0501073_0072863_100_1563 449
230 3300049670 Ga0501236_002942 Ga0501236_002942_91_1452 449
231 3300049708 Ga0501245_002777 Ga0501245_002777_633_1994 449
232 3300050494 nmdc:mga06z11_40_c1 nmdc:mga06z11_40_c1_36693_38051 449
233 3300050495 nmdc:mga04h51_98_c1 nmdc:mga04h51_98_c1_18867_20225 449
234 iso_pu_bacteria 2510917021 2511127983 449
235 iso_pu_bacteria 2599185354 2600200398 449
236 iso_pu_bacteria 2599185359 2600228803 449
237 iso_pu_bacteria 2879163058 2879165930 449
238 iso_pu_bacteria 8057101203 8057103394 449
239 2162886007 SwRhRL2b_contig_2033581 SwRhRL2b_0688.00003820 450
240 3300005347 Ga0070668_100006472 Ga0070668_1000064723 450
241 3300005578 Ga0068854_100009134 Ga0068854_1000091343 450
242 3300009011 Ga0105251_10008749 Ga0105251_100087498 450
243 3300009545 Ga0105237_10086362 Ga0105237_100863623 450
244 3300025298 Ga0209050_1000644 Ga0209050_100064458 450
245 3300025914 Ga0207671_10004959 Ga0207671_100049595 450
246 3300025981 Ga0207640_10005042 Ga0207640_100050426 450
247 3300031911 Ga0307412_10003458 Ga0307412_100034588 450
248 3300041486 Ga0451807_1989966 Ga0451807_1989966_617_2017 450
249 3300048911 Ga0496108_0021127 Ga0496108_0021127_3009_4361 450
250 3300048914 Ga0496111_0022210 Ga0496111_0022210_1571_2923 450
251 3300048922 Ga0496119_0068659 Ga0496119_0068659_514_1866 450
252 3300048924 Ga0496121_0000670 Ga0496121_0000670_38150_39502 450
253 3300048925 Ga0496122_0002778 Ga0496122_0002778_2190_3542 450
254 3300048926 Ga0496123_0015683 Ga0496123_0015683_1410_2762 450
255 3300048927 Ga0496124_0000316 Ga0496124_0000316_1183_2544 450
256 3300048927 Ga0496124_0001387 Ga0496124_0001387_12512_13864 450
257 3300048928 Ga0496125_0004041 Ga0496125_0004041_8393_9745 450
258 3300048929 Ga0496126_0033548 Ga0496126_0033548_2761_4113 450
259 3300049569 Ga0501032_0036954 Ga0501032_0036954_625_2091 450
260 3300049570 Ga0501033_0006471 Ga0501033_0006471_6689_8155 450
261 3300049572 Ga0501036_0007146 Ga0501036_0007146_4033_5499 450
262 3300049573 Ga0501037_0004432 Ga0501037_0004432_8012_9478 450
263 3300049574 Ga0501038_0004818 Ga0501038_0004818_7204_8670 450
264 3300049580 Ga0501046_0003790 Ga0501046_0003790_7129_8595 450
265 3300049581 Ga0501047_0004246 Ga0501047_0004246_8221_9687 450
266 3300049582 Ga0501048_0007716 Ga0501048_0007716_1290_2756 450
267 3300049586 Ga0501070_0015007 Ga0501070_0015007_718_2184 450
268 iso_pu_bacteria 2818991466 2819714629 450
269 iso_pu_bacteria 2928526807 2928529132 450
270 iso_pu_bacteria 2928968154 2928968676 450

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13372

Alginate_exp

Alginate export

278

521

0.96

PF13372

Alginate_exp

Alginate export

72

263

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5d5d-assembly1.cif.gz_A in meso in situ serial x-ray crystallography structure of alge at 100 k 0.744 68 450
4xnk-assembly1.cif.gz_A x-ray structure of alge1 0.742 61 450
3rbh-assembly2.cif.gz_B structure of alginate export protein alge from pseudomonas aeruginosa 0.7411 68 450
3rbh-assembly4.cif.gz_D structure of alginate export protein alge from pseudomonas aeruginosa 0.741 68 450
3rbh-assembly1.cif.gz_A structure of alginate export protein alge from pseudomonas aeruginosa 0.7394 68 450
ID Description Score Start End Superfamily
3rbhB00 Mainly Beta;Beta Barrel;Porin; 0.7322 68 450 2.40.160.100
3t24B01 Mainly Beta;Beta Barrel;Porin;Porin 0.6707 66 450 2.40.160.10
3rbhB00 Mainly Beta;Beta Barrel;Porin; 0.6654 68 450 2.40.160.100
3t24B01 Mainly Beta;Beta Barrel;Porin;Porin 0.6627 66 450 2.40.160.10
3sy9C01 Mainly Beta;Beta Barrel;Porin;Porin 0.6493 67 450 2.40.160.10
ID Description Score Start End GO Terms
AF-A0A2W6Y5V6-F1-model_v4 Alginate export domain-containing protein 0.982 339 450
AF-A0A560WII8-F1-model_v4 Alginate export protein 0.9752 139 450
AF-A0A560WII8-F1-model_v4 Alginate export protein 0.9691 139 450
AF-A0A4P7EFW0-F1-model_v4 deleted 0.9658 251 450
AF-A0A4Q2YTB9-F1-model_v4 Alginate export domain-containing protein 0.9657 100 450

Feature Viewer

pLDDT pTM Quality
84.99 0.83 High
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Predicted Structure (AlphaFold2)

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