F377360

General Info

Members Datasets Scaffolds Average Seq Length
271 187 264 496

Family's Representative Sequence

Representative Sequence 3300002705|JGI25156J39149_1000547|JGI25156J39149_100054710
Length 600
Sequence MLAIKQCRHAVPGGHAWCSKGGGPEQVSYNLCRNWRSPNCRKSAAKRWLRDSPGGLLFVERYGVGSTLVAPIDDLARSGVGLVALYNARQHNIETPKRMKTALKVTRQQDFAEWYQQVIKAADLAENAEVRGCMNIKPWGYAIWENIQQRFDKLLKATGHRNAYFPLLIPLRFFQQEAQHVEGFAKECAVVTHHRLALHEGTLVPDPDSKLEEPLVIRPTSETIIGDAFSRWIQSPKDLPLLINQWCNVMRWEMRTRLFLRTSEFLWQEGHTAHATSEEAIEEARLILQMYKDFVTDALCIPVIVGEKSAGERFPGAVNTWSIEGMMQDGKALQAGTSHFLGQNFSRAYKIKFGSSQGEQFVWTTSWGISTRLIGGLIMTHSDDNGLVLPPAISPVHLRVLLLTEDPAEAKRLRGFVEDALAQQATNVCGEPLRTEYLTVGRRPGDSFWVAVKQGVPAIAQVGLREMDSGSISLTLRTDPQLQRQSVSHASFLATLVTSLEDMQVSLRETARAFREKNLVRPENLEALKAAFSDGDISPFALCPVDVAAESEEFAQLFLKEHKLSFRCLPEGELGILAADAKCIFTGRAATHVALLAKSY

Samples

Sample ID Description Type Environment
1 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
2 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
3 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
4 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
5 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
6 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
7 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
8 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
9 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
10 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
11 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
12 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
13 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
14 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
18 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
19 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
24 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
25 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
28 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
29 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
30 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
33 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
37 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
38 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
39 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
40 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
43 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
44 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
45 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
46 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
47 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
48 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
51 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
52 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
53 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
54 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
55 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
61 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
62 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
82 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
85 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
86 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
90 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
91 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
93 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
94 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
124 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
126 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
127 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
128 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
129 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
130 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
131 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
132 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
133 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
134 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
135 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
136 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
139 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
140 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
141 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
142 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
143 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
144 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
145 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
146 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
147 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
148 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
149 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
150 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
151 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
152 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
153 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
154 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
155 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
156 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
157 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
158 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
159 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
160 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
161 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
162 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
163 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
172 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
173 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
180 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
185 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
186 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
187 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.05
Metatranscriptomes 0.37
Isolates 2.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.54
Nodule 0
Rhizoplane 1.11
Rhizosphere 88.93
Stem 0
Stem Tuber 0
Unclassified 4.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10011852 3300001979 Bacteria 3308
2 JGI25156J39149_1000547 3300002705 Bacteria 21595
3 JGI25162J39368_1001919 3300002737 Bacteria 9518
4 JGI25154J39366_1000427 3300002738 Bacteria 22526
5 JGI25157J39369_1000392 3300002741 Bacteria 30204
6 JGI25164J39214_1001307 3300002772 Bacteria 6283
7 JGI25152J39213_1000456 3300002773 Bacteria 23922
8 JGI25406J46586_10003103 3300003203 Bacteria 7815
9 JGI25165J46597_1000855 3300003214 Bacteria 22032
10 rootH1_10002772 3300003323 Bacteria 26216
11 Ga0055539_1000514 3300003752 Bacteria 11903
12 Ga0055536_1000226 3300003781 Bacteria 45469
13 Ga0058863_11569017 3300004799 Bacteria 3405
14 Ga0065165_1005665 3300005262 Bacteria 6894
15 Ga0065714_10010276 3300005288 Bacteria 3084
16 Ga0065704_10070382 3300005289 Bacteria 27921
17 Ga0065712_10022996 3300005290 Bacteria 2457
18 Ga0065715_10002018 3300005293 Bacteria 7675
19 Ga0065707_10100020 3300005295 Bacteria 2962
20 Ga0070658_10000026 3300005327 Bacteria 171716
21 Ga0070683_100065057 3300005329 Bacteria 3394
22 Ga0070666_10019549 3300005335 Bacteria 4374
23 Ga0070680_100013176 3300005336 Bacteria 6437
24 Ga0070682_100005072 3300005337 Bacteria 7320
25 Ga0070660_100006109 3300005339 Bacteria 8329
26 Ga0070660_100131089 3300005339 Bacteria 2006
27 Ga0070689_100025973 3300005340 Bacteria 4404
28 Ga0070661_100014644 3300005344 Bacteria 5529
29 Ga0070671_100022746 3300005355 Bacteria 5121
30 Ga0070671_100129542 3300005355 Bacteria 2125
31 Ga0070674_100015169 3300005356 Bacteria 4805
32 Ga0070673_100155338 3300005364 Bacteria 1941
33 Ga0070659_100017991 3300005366 Bacteria 5327
34 Ga0070701_10025808 3300005438 Bacteria 2858
35 Ga0070705_100075368 3300005440 Bacteria 2054
36 Ga0070694_100077991 3300005444 Bacteria 2296
37 Ga0070694_100113955 3300005444 Bacteria 1930
38 Ga0070662_100045113 3300005457 Bacteria 3161
39 Ga0070681_10044744 3300005458 Bacteria 4432
40 Ga0070681_10058575 3300005458 Bacteria 3831
41 Ga0070706_100171049 3300005467 Bacteria 2029
42 Ga0070698_100010893 3300005471 Bacteria 9672
43 Ga0070698_100141818 3300005471 Bacteria 2353
44 Ga0070679_100000001 3300005530 Bacteria 764811
45 Ga0070679_100024187 3300005530 Bacteria 5952
46 Ga0070679_100037753 3300005530 Bacteria 4799
47 Ga0070684_100004363 3300005535 Bacteria 10751
48 Ga0070697_100064426 3300005536 Bacteria 2993
49 Ga0068853_100027301 3300005539 Bacteria 4796
50 Ga0068855_100000727 3300005563 Bacteria 40453
51 Ga0068855_100001020 3300005563 Bacteria 34917
52 Ga0068855_100028481 3300005563 Bacteria 6682
53 Ga0068855_100042047 3300005563 Bacteria 5416
54 Ga0068855_100045831 3300005563 Bacteria 5170
55 Ga0068855_100062303 3300005563 Bacteria 4354
56 Ga0068855_100142726 3300005563 Bacteria 2728
57 Ga0068857_100001841 3300005577 Bacteria 17068
58 Ga0068856_100001155 3300005614 Bacteria 27745
59 Ga0068856_100016916 3300005614 Bacteria 7067
60 Ga0068856_100186765 3300005614 Bacteria 2087
61 Ga0068852_100191128 3300005616 Bacteria 1932
62 Ga0068864_100184267 3300005618 Bacteria 1910
63 Ga0068870_10058910 3300005840 Bacteria 2057
64 Ga0068863_100071087 3300005841 Bacteria 3292
65 Ga0068860_100001144 3300005843 Bacteria 29103
66 Ga0068860_100067459 3300005843 Bacteria 3399
67 Ga0097621_100006150 3300006237 Bacteria 8506
68 Ga0097621_100145896 3300006237 Bacteria 2026
69 Ga0068871_100031558 3300006358 Bacteria 4179
70 Ga0068871_100058409 3300006358 Bacteria 3141
71 Ga0075428_100018000 3300006844 Bacteria 7807
72 Ga0075428_100078998 3300006844 Bacteria 3591
73 Ga0075431_100038869 3300006847 Bacteria 4902
74 Ga0075431_100105395 3300006847 Bacteria 2909
75 Ga0075434_100062804 3300006871 Bacteria 3698
76 Ga0075429_100001439 3300006880 Bacteria 19542
77 Ga0075429_100018746 3300006880 Bacteria 5992
78 Ga0105240_10000010 3300009093 Bacteria 537830
79 Ga0105240_10000263 3300009093 Bacteria 103973
80 Ga0105240_10011818 3300009093 Bacteria 12124
81 Ga0105240_10026711 3300009093 Bacteria 7572
82 Ga0111539_10006181 3300009094 Bacteria 15452
83 Ga0111539_10034513 3300009094 Bacteria 6133
84 Ga0114129_10013499 3300009147 Bacteria 11641
85 Ga0105241_10111664 3300009174 Bacteria 2189
86 Ga0105242_10140087 3300009176 Bacteria 2098
87 Ga0105237_10000227 3300009545 Bacteria 79785
88 Ga0105237_10029125 3300009545 Bacteria 5616
89 Ga0105237_10044833 3300009545 Bacteria 4452
90 Ga0105238_10003420 3300009551 Bacteria 15826
91 Ga0105238_10096330 3300009551 Bacteria 2945
92 Ga0105249_10038847 3300009553 Bacteria 4319
93 Ga0105239_10000005 3300010375 Bacteria 496066
94 Ga0105239_10000013 3300010375 Bacteria 327371
95 Ga0105239_10002474 3300010375 Bacteria 23547
96 Ga0105239_10022560 3300010375 Bacteria 6941
97 Ga0157373_10002742 3300013100 Bacteria 13341
98 Ga0157371_10009597 3300013102 Bacteria 7611
99 Ga0157370_10013600 3300013104 Bacteria 8375
100 Ga0157370_10051987 3300013104 Bacteria 3912
101 Ga0157369_10037434 3300013105 Bacteria 5311
102 Ga0157369_10077823 3300013105 Bacteria 3555
103 Ga0157374_10003352 3300013296 Bacteria 13449
104 Ga0157374_10010005 3300013296 Bacteria 8140
105 Ga0157378_10003085 3300013297 Bacteria 14806
106 Ga0157378_10005250 3300013297 Bacteria 11378
107 Ga0157378_10078355 3300013297 Bacteria 2980
108 Ga0163162_10001991 3300013306 Bacteria 19207
109 Ga0163162_10046945 3300013306 Bacteria 4329
110 Ga0157372_10000838 3300013307 Bacteria 33401
111 Ga0157375_10046822 3300013308 Bacteria 4219
112 Ga0157380_10038121 3300014326 Bacteria 3730
113 Ga0157377_10002484 3300014745 Bacteria 8162
114 Ga0157377_10031104 3300014745 Bacteria 2898
115 Ga0157379_10102752 3300014968 Bacteria 2565
116 Ga0163161_10008798 3300017792 Bacteria 6979
117 Ga0213874_10020560 3300021377 Bacteria 1811
118 Ga0213876_10005098 3300021384 Bacteria 7242
119 Ga0207427_100106 3300025231 Bacteria 117041
120 Ga0209437_100226 3300025233 Bacteria 100303
121 Ga0209646_1000115 3300025246 Bacteria 152389
122 Ga0209026_1000115 3300025250 Bacteria 136234
123 Ga0209677_100219 3300025253 Bacteria 41520
124 Ga0209759_1000920 3300025256 Bacteria 21646
125 Ga0209233_1000089 3300025261 Bacteria 316381
126 Ga0209455_1001343 3300025272 Bacteria 11330
127 Ga0207680_10060977 3300025903 Bacteria 2299
128 Ga0207647_10005334 3300025904 Bacteria 9450
129 Ga0207643_10001942 3300025908 Bacteria 11429
130 Ga0207705_10000040 3300025909 Bacteria 185735
131 Ga0207654_10002638 3300025911 Bacteria 9098
132 Ga0207707_10038633 3300025912 Bacteria 4171
133 Ga0207695_10000019 3300025913 Bacteria 732137
134 Ga0207695_10011118 3300025913 Bacteria 10927
135 Ga0207695_10052102 3300025913 Bacteria 4290
136 Ga0207671_10000515 3300025914 Bacteria 52421
137 Ga0207671_10003333 3300025914 Bacteria 16132
138 Ga0207671_10009197 3300025914 Bacteria 8287
139 Ga0207671_10023118 3300025914 Bacteria 4689
140 Ga0207660_10002041 3300025917 Bacteria 13428
141 Ga0207657_10013185 3300025919 Bacteria 8115
142 Ga0207649_10007962 3300025920 Bacteria 5766
143 Ga0207652_10000001 3300025921 Bacteria 1006643
144 Ga0207652_10000002 3300025921 Bacteria 878035
145 Ga0207652_10003659 3300025921 Bacteria 12652
146 Ga0207652_10101411 3300025921 Bacteria 2542
147 Ga0207681_10094608 3300025923 Bacteria 2141
148 Ga0207694_10011208 3300025924 Bacteria 6769
149 Ga0207694_10104854 3300025924 Bacteria 2244
150 Ga0207659_10088544 3300025926 Bacteria 2306
151 Ga0207644_10091208 3300025931 Bacteria 2272
152 Ga0207706_10005620 3300025933 Bacteria 11681
153 Ga0207691_10015555 3300025940 Bacteria 7233
154 Ga0207689_10013009 3300025942 Bacteria 7106
155 Ga0207667_10000020 3300025949 Bacteria 374770
156 Ga0207667_10000275 3300025949 Bacteria 71281
157 Ga0207667_10004578 3300025949 Bacteria 16953
158 Ga0207712_10004058 3300025961 Bacteria 9245
159 Ga0207712_10010777 3300025961 Bacteria 5811
160 Ga0207668_10028430 3300025972 Bacteria 3656
161 Ga0207639_10017930 3300026041 Bacteria 5022
162 Ga0207702_10001532 3300026078 Bacteria 22854
163 Ga0207702_10005183 3300026078 Bacteria 11457
164 Ga0207702_10083181 3300026078 Bacteria 2784
165 Ga0207641_10061080 3300026088 Bacteria 3213
166 Ga0207641_10223707 3300026088 Bacteria 1746
167 Ga0207648_10024630 3300026089 Bacteria 5368
168 Ga0207674_10001433 3300026116 Bacteria 30815
169 Ga0207675_100016451 3300026118 Bacteria 6908
170 Ga0207675_100122026 3300026118 Bacteria 2466
171 Ga0207428_10096689 3300027907 Bacteria 2286
172 Ga0268264_10001914 3300028381 Bacteria 18811
173 Ga0268264_10038544 3300028381 Bacteria 3945
174 Ga0307515_10011185 3300028794 Bacteria 17065
175 Ga0265338_10001166 3300028800 Bacteria 43408
176 Ga0265327_10005299 3300031251 Bacteria 10823
177 Ga0307408_100005619 3300031548 Bacteria 8384
178 Ga0307408_100009517 3300031548 Bacteria 6411
179 Ga0307408_100010275 3300031548 Bacteria 6174
180 Ga0265314_10012795 3300031711 Bacteria 6820
181 Ga0265314_10028555 3300031711 Bacteria 4158
182 Ga0307416_100066835 3300032002 Bacteria 2962
183 Ga0307414_10047385 3300032004 Bacteria 2957
184 Ga0307411_10095178 3300032005 Bacteria 2090
185 Ga0373927_0000516 3300035695 Bacteria 29457
186 Ga0316584_0007753 3300036712 Bacteria 7362
187 Ga0373925_0000854 3300037068 Bacteria 27920
188 Ga0395899_0000717 3300037312 Bacteria 33215
189 Ga0395899_0007644 3300037312 Bacteria 8337
190 Ga0395900_0000014 3300037418 Bacteria 386513
191 Ga0395900_0021850 3300037418 Bacteria 6543
192 Ga0395898_0024455 3300037466 Bacteria 6093
193 Ga0395905_0000011 3300037471 Bacteria 424563
194 Ga0395905_0000037 3300037471 Bacteria 261808
195 Ga0395905_0001611 3300037471 Bacteria 26826
196 Ga0395905_0004029 3300037471 Bacteria 15416
197 Ga0395901_0000219 3300038443 Bacteria 71884
198 Ga0395901_0032957 3300038443 Bacteria 5345
199 Ga0395901_0146244 3300038443 Bacteria 2484
200 Ga0436365_0638183 3300039437 Bacteria 28129
201 Ga0436360_0208698 3300039438 Bacteria 3374
202 Ga0436361_0320970 3300039447 Bacteria 3769
203 Ga0451795_1043599 3300041456 Bacteria 1758
204 Ga0451837_0948525 3300041494 Bacteria 2351
205 Ga0450897_000185 3300042128 Bacteria 3107
206 Ga0439434_0004752 3300042435 Bacteria 3981
207 Ga0451577_0006749 3300042876 Bacteria 11385
208 Ga0451577_0069314 3300042876 Bacteria 3145
209 Ga0451577_0129196 3300042876 Bacteria 2266
210 Ga0453683_0000005 3300044673 Bacteria 741657
211 Ga0453683_0039628 3300044673 Bacteria 2960
212 Ga0453683_0097818 3300044673 Bacteria 1842
213 Ga0466966_0001023 3300044684 Bacteria 17865
214 Ga0453684_0000017 3300044712 Bacteria 925696
215 Ga0453684_0000334 3300044712 Bacteria 196444
216 Ga0453684_0000530 3300044712 Bacteria 145639
217 Ga0453684_0001234 3300044712 Bacteria 77976
218 Ga0453684_0015186 3300044712 Bacteria 12215
219 Ga0453684_0031736 3300044712 Bacteria 7411
220 Ga0466957_0000134 3300044842 Bacteria 31410
221 Ga0466957_0031514 3300044842 Bacteria 3169
222 Ga0466959_0000111 3300045049 Bacteria 52637
223 Ga0451576_0002804 3300045051 Bacteria 25129
224 Ga0451576_0048287 3300045051 Bacteria 4472
225 Ga0495627_003040 3300046453 Bacteria 7658
226 Ga0495606_0016823 3300046507 Bacteria 5557
227 Ga0495643_0001598 3300046522 Bacteria 20074
228 Ga0495652_0023951 3300046529 Bacteria 5408
229 Ga0495633_0000242 3300046558 Bacteria 66147
230 Ga0495667_0143036 3300046559 Bacteria 1541
231 Ga0495668_0000175 3300046616 Bacteria 95600
232 Ga0495625_0027196 3300046660 Bacteria 4311
233 Ga0495672_0016581 3300047320 Bacteria 4959
234 Ga0495672_0016899 3300047320 Bacteria 4894
235 Ga0496114_0000297 3300048917 Bacteria 36559
236 Ga0496114_0129598 3300048917 Bacteria 2177
237 Ga0501033_0010240 3300049570 Bacteria 7194
238 Ga0501034_0000373 3300049571 Bacteria 76337
239 Ga0501034_0002222 3300049571 Bacteria 23945
240 Ga0501037_0003388 3300049573 Bacteria 11590
241 Ga0501038_0027769 3300049574 Bacteria 5030
242 Ga0501039_0016941 3300049575 Bacteria 5586
243 Ga0501047_0000154 3300049581 Bacteria 83424
244 Ga0501047_0139743 3300049581 Bacteria 2301
245 Ga0501047_0263040 3300049581 Bacteria 1572
246 Ga0501067_0019481 3300049583 Bacteria 3758
247 Ga0501257_006751 3300049686 Bacteria 2553
248 Ga0501225_0001088 3300049705 Bacteria 8531
249 Ga0501080_0017582 3300049742 Bacteria 6611
250 Ga0501083_0007779 3300049744 Bacteria 7592
251 Ga0501035_0030672 3300049822 Bacteria 4901
252 Ga0501035_0107987 3300049822 Bacteria 2440
253 Ga0501044_0007421 3300049823 Bacteria 12060
254 Ga0501044_0041504 3300049823 Bacteria 4790
255 nmdc:mga05p37_8076_c1 3300050507 Bacteria 12434
256 nmdc:mga09592_10397_c1 3300050508 Bacteria 7573
257 nmdc:mga09592_61763_c1 3300050508 Bacteria 3169
258 nmdc:mga0qj67_55084_c1 3300050509 Bacteria 3150
259 nmdc:mga0n895_42602_c1 3300050512 Bacteria 4417
260 nmdc:mga0a205_152476_c1 3300050515 Bacteria 2210
261 Ga0495601_0004033 3300053077 Bacteria 8460
262 Ga0500641_0000123 3300053096 Bacteria 29195
263 Ga0500594_0000002 3300053118 Bacteria 916890
264 Ga0500622_0003570 3300053156 Bacteria 10269

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041494 Ga0451837_0948525 Ga0451837_0948525_1024_2337 436
2 3300049581 Ga0501047_0263040 Ga0501047_0263040_237_1553 436
3 3300046559 Ga0495667_0143036 Ga0495667_0143036_17_1381 441
4 3300009174 Ga0105241_10111664 Ga0105241_101116643 442
5 3300049581 Ga0501047_0139743 Ga0501047_0139743_876_2252 456
6 3300044712 Ga0453684_0000017 Ga0453684_0000017_762949_764457 469
7 3300006871 Ga0075434_100062804 Ga0075434_1000628042 474
8 3300050512 nmdc:mga0n895_42602_c1 nmdc:mga0n895_42602_c1_1942_3420 474
9 3300005563 Ga0068855_100028481 Ga0068855_1000284816 475
10 3300025949 Ga0207667_10004578 Ga0207667_100045786 475
11 3300025272 Ga0209455_1001343 Ga0209455_10013434 477
12 3300002705 JGI25156J39149_1000547 JGI25156J39149_100054710 484
13 3300002738 JGI25154J39366_1000427 JGI25154J39366_10004279 484
14 3300002741 JGI25157J39369_1000392 JGI25157J39369_10003929 484
15 3300003752 Ga0055539_1000514 Ga0055539_10005147 484
16 3300025246 Ga0209646_1000115 Ga0209646_100011518 484
17 3300025250 Ga0209026_1000115 Ga0209026_1000115114 484
18 3300025253 Ga0209677_100219 Ga0209677_10021923 484
19 3300025256 Ga0209759_1000920 Ga0209759_100092010 484
20 3300044712 Ga0453684_0031736 Ga0453684_0031736_2590_4119 485
21 3300045051 Ga0451576_0002804 Ga0451576_0002804_3473_5002 485
22 3300005530 Ga0070679_100000001 Ga0070679_10000000171 486
23 3300006844 Ga0075428_100018000 Ga0075428_1000180004 486
24 3300025912 Ga0207707_10038633 Ga0207707_100386333 486
25 3300025917 Ga0207660_10002041 Ga0207660_100020415 486
26 3300025921 Ga0207652_10000001 Ga0207652_1000000194 486
27 3300025921 Ga0207652_10000002 Ga0207652_10000002633 486
28 iso_pu_bacteria 2852623160 2852623325 486
29 iso_pu_bacteria 2884933994 2884937797 486
30 iso_pu_bacteria 2896344016 2896344639 486
31 iso_pu_bacteria 2898713307 2898715354 486
32 iso_pu_bacteria 2904445276 2904449217 486
33 iso_pu_bacteria 2910245624 2910245780 486
34 iso_pu_bacteria 8055588893 8055589439 486
35 3300044712 Ga0453684_0000530 Ga0453684_0000530_32656_34122 487
36 3300005843 Ga0068860_100067459 Ga0068860_1000674593 488
37 3300013297 Ga0157378_10078355 Ga0157378_100783553 488
38 3300028381 Ga0268264_10038544 Ga0268264_100385444 488
39 3300044712 Ga0453684_0015186 Ga0453684_0015186_3796_5265 488
40 3300049581 Ga0501047_0000154 Ga0501047_0000154_72614_74146 488
41 3300049583 Ga0501067_0019481 Ga0501067_0019481_374_1906 488
42 3300049742 Ga0501080_0017582 Ga0501080_0017582_2345_3877 488
43 3300049744 Ga0501083_0007779 Ga0501083_0007779_2237_3769 488
44 3300053077 Ga0495601_0004033 Ga0495601_0004033_6901_8448 488
45 3300053118 Ga0500594_0000002 Ga0500594_0000002_876024_877496 488
46 3300005440 Ga0070705_100075368 Ga0070705_1000753682 489
47 3300005444 Ga0070694_100077991 Ga0070694_1000779912 489
48 3300005467 Ga0070706_100171049 Ga0070706_1001710492 489
49 3300005536 Ga0070697_100064426 Ga0070697_1000644262 489
50 3300021377 Ga0213874_10020560 Ga0213874_100205601 489
51 3300021384 Ga0213876_10005098 Ga0213876_100050986 489
52 3300031251 Ga0265327_10005299 Ga0265327_100052997 489
53 3300039437 Ga0436365_0638183 Ga0436365_0638183_16910_18451 489
54 3300039438 Ga0436360_0208698 Ga0436360_0208698_457_1998 489
55 3300039447 Ga0436361_0320970 Ga0436361_0320970_2067_3608 489
56 3300041456 Ga0451795_1043599 Ga0451795_1043599_132_1622 489
57 3300001979 JGI24740J21852_10011852 JGI24740J21852_100118522 490
58 3300002737 JGI25162J39368_1001919 JGI25162J39368_10019198 490
59 3300002772 JGI25164J39214_1001307 JGI25164J39214_10013077 490
60 3300002773 JGI25152J39213_1000456 JGI25152J39213_10004562 490
61 3300003203 JGI25406J46586_10003103 JGI25406J46586_100031035 490
62 3300003214 JGI25165J46597_1000855 JGI25165J46597_10008558 490
63 3300003323 rootH1_10002772 rootH1_1000277214 490
64 3300003781 Ga0055536_1000226 Ga0055536_100022635 490
65 3300004799 Ga0058863_11569017 Ga0058863_115690171 490
66 3300005262 Ga0065165_1005665 Ga0065165_10056654 490
67 3300005288 Ga0065714_10010276 Ga0065714_100102763 490
68 3300005289 Ga0065704_10070382 Ga0065704_1007038222 490
69 3300005290 Ga0065712_10022996 Ga0065712_100229961 490
70 3300005293 Ga0065715_10002018 Ga0065715_100020182 490
71 3300005295 Ga0065707_10100020 Ga0065707_101000204 490
72 3300005327 Ga0070658_10000026 Ga0070658_10000026115 490
73 3300005329 Ga0070683_100065057 Ga0070683_1000650574 490
74 3300005335 Ga0070666_10019549 Ga0070666_100195493 490
75 3300005336 Ga0070680_100013176 Ga0070680_1000131763 490
76 3300005337 Ga0070682_100005072 Ga0070682_1000050725 490
77 3300005339 Ga0070660_100006109 Ga0070660_1000061094 490
78 3300005339 Ga0070660_100131089 Ga0070660_1001310891 490
79 3300005340 Ga0070689_100025973 Ga0070689_1000259734 490
80 3300005344 Ga0070661_100014644 Ga0070661_1000146444 490
81 3300005355 Ga0070671_100022746 Ga0070671_1000227462 490
82 3300005355 Ga0070671_100129542 Ga0070671_1001295421 490
83 3300005356 Ga0070674_100015169 Ga0070674_1000151694 490
84 3300005364 Ga0070673_100155338 Ga0070673_1001553381 490
85 3300005366 Ga0070659_100017991 Ga0070659_1000179914 490
86 3300005438 Ga0070701_10025808 Ga0070701_100258082 490
87 3300005444 Ga0070694_100113955 Ga0070694_1001139552 490
88 3300005457 Ga0070662_100045113 Ga0070662_1000451132 490
89 3300005458 Ga0070681_10044744 Ga0070681_100447444 490
90 3300005458 Ga0070681_10058575 Ga0070681_100585752 490
91 3300005471 Ga0070698_100010893 Ga0070698_1000108933 490
92 3300005471 Ga0070698_100141818 Ga0070698_1001418181 490
93 3300005530 Ga0070679_100024187 Ga0070679_1000241873 490
94 3300005530 Ga0070679_100037753 Ga0070679_1000377534 490
95 3300005535 Ga0070684_100004363 Ga0070684_1000043633 490
96 3300005539 Ga0068853_100027301 Ga0068853_1000273012 490
97 3300005563 Ga0068855_100000727 Ga0068855_10000072718 490
98 3300005563 Ga0068855_100001020 Ga0068855_1000010204 490
99 3300005563 Ga0068855_100042047 Ga0068855_1000420477 490
100 3300005563 Ga0068855_100045831 Ga0068855_1000458316 490
101 3300005563 Ga0068855_100062303 Ga0068855_1000623034 490
102 3300005563 Ga0068855_100142726 Ga0068855_1001427262 490
103 3300005577 Ga0068857_100001841 Ga0068857_1000018417 490
104 3300005614 Ga0068856_100001155 Ga0068856_10000115514 490
105 3300005614 Ga0068856_100016916 Ga0068856_1000169166 490
106 3300005614 Ga0068856_100186765 Ga0068856_1001867652 490
107 3300005616 Ga0068852_100191128 Ga0068852_1001911281 490
108 3300005618 Ga0068864_100184267 Ga0068864_1001842672 490
109 3300005840 Ga0068870_10058910 Ga0068870_100589102 490
110 3300005841 Ga0068863_100071087 Ga0068863_1000710871 490
111 3300005843 Ga0068860_100001144 Ga0068860_1000011448 490
112 3300006237 Ga0097621_100006150 Ga0097621_1000061509 490
113 3300006237 Ga0097621_100145896 Ga0097621_1001458961 490
114 3300006358 Ga0068871_100031558 Ga0068871_1000315583 490
115 3300006358 Ga0068871_100058409 Ga0068871_1000584093 490
116 3300006844 Ga0075428_100078998 Ga0075428_1000789982 490
117 3300006847 Ga0075431_100038869 Ga0075431_1000388692 490
118 3300006847 Ga0075431_100105395 Ga0075431_1001053954 490
119 3300006880 Ga0075429_100001439 Ga0075429_1000014397 490
120 3300006880 Ga0075429_100018746 Ga0075429_1000187466 490
121 3300009093 Ga0105240_10000010 Ga0105240_10000010367 490
122 3300009093 Ga0105240_10000263 Ga0105240_1000026385 490
123 3300009093 Ga0105240_10011818 Ga0105240_1001181810 490
124 3300009093 Ga0105240_10026711 Ga0105240_100267115 490
125 3300009094 Ga0111539_10006181 Ga0111539_100061812 490
126 3300009094 Ga0111539_10034513 Ga0111539_100345133 490
127 3300009147 Ga0114129_10013499 Ga0114129_100134994 490
128 3300009176 Ga0105242_10140087 Ga0105242_101400873 490
129 3300009545 Ga0105237_10000227 Ga0105237_1000022726 490
130 3300009545 Ga0105237_10029125 Ga0105237_100291257 490
131 3300009545 Ga0105237_10044833 Ga0105237_100448332 490
132 3300009551 Ga0105238_10003420 Ga0105238_1000342012 490
133 3300009551 Ga0105238_10096330 Ga0105238_100963302 490
134 3300009553 Ga0105249_10038847 Ga0105249_100388471 490
135 3300010375 Ga0105239_10000005 Ga0105239_10000005390 490
136 3300010375 Ga0105239_10000013 Ga0105239_10000013148 490
137 3300010375 Ga0105239_10002474 Ga0105239_1000247412 490
138 3300010375 Ga0105239_10022560 Ga0105239_100225601 490
139 3300013100 Ga0157373_10002742 Ga0157373_1000274213 490
140 3300013102 Ga0157371_10009597 Ga0157371_100095974 490
141 3300013104 Ga0157370_10013600 Ga0157370_100136005 490
142 3300013104 Ga0157370_10051987 Ga0157370_100519871 490
143 3300013105 Ga0157369_10037434 Ga0157369_100374344 490
144 3300013105 Ga0157369_10077823 Ga0157369_100778232 490
145 3300013296 Ga0157374_10003352 Ga0157374_100033522 490
146 3300013296 Ga0157374_10010005 Ga0157374_100100055 490
147 3300013297 Ga0157378_10003085 Ga0157378_100030858 490
148 3300013297 Ga0157378_10005250 Ga0157378_1000525012 490
149 3300013306 Ga0163162_10001991 Ga0163162_1000199116 490
150 3300013306 Ga0163162_10046945 Ga0163162_100469452 490
151 3300013307 Ga0157372_10000838 Ga0157372_1000083810 490
152 3300013308 Ga0157375_10046822 Ga0157375_100468223 490
153 3300014326 Ga0157380_10038121 Ga0157380_100381215 490
154 3300014745 Ga0157377_10002484 Ga0157377_100024841 490
155 3300014745 Ga0157377_10031104 Ga0157377_100311042 490
156 3300014968 Ga0157379_10102752 Ga0157379_101027524 490
157 3300017792 Ga0163161_10008798 Ga0163161_100087989 490
158 3300025231 Ga0207427_100106 Ga0207427_10010629 490
159 3300025233 Ga0209437_100226 Ga0209437_10022628 490
160 3300025261 Ga0209233_1000089 Ga0209233_100008928 490
161 3300025903 Ga0207680_10060977 Ga0207680_100609773 490
162 3300025904 Ga0207647_10005334 Ga0207647_100053346 490
163 3300025908 Ga0207643_10001942 Ga0207643_100019429 490
164 3300025909 Ga0207705_10000040 Ga0207705_1000004022 490
165 3300025911 Ga0207654_10002638 Ga0207654_100026387 490
166 3300025913 Ga0207695_10000019 Ga0207695_1000001989 490
167 3300025913 Ga0207695_10011118 Ga0207695_1001111811 490
168 3300025913 Ga0207695_10052102 Ga0207695_100521023 490
169 3300025914 Ga0207671_10000515 Ga0207671_1000051536 490
170 3300025914 Ga0207671_10003333 Ga0207671_100033337 490
171 3300025914 Ga0207671_10009197 Ga0207671_100091974 490
172 3300025914 Ga0207671_10023118 Ga0207671_100231184 490
173 3300025919 Ga0207657_10013185 Ga0207657_100131859 490
174 3300025920 Ga0207649_10007962 Ga0207649_100079622 490
175 3300025921 Ga0207652_10003659 Ga0207652_1000365912 490
176 3300025921 Ga0207652_10101411 Ga0207652_101014113 490
177 3300025923 Ga0207681_10094608 Ga0207681_100946082 490
178 3300025924 Ga0207694_10011208 Ga0207694_100112086 490
179 3300025924 Ga0207694_10104854 Ga0207694_101048543 490
180 3300025926 Ga0207659_10088544 Ga0207659_100885442 490
181 3300025931 Ga0207644_10091208 Ga0207644_100912081 490
182 3300025933 Ga0207706_10005620 Ga0207706_100056204 490
183 3300025940 Ga0207691_10015555 Ga0207691_100155552 490
184 3300025942 Ga0207689_10013009 Ga0207689_100130092 490
185 3300025949 Ga0207667_10000020 Ga0207667_10000020209 490
186 3300025949 Ga0207667_10000275 Ga0207667_1000027520 490
187 3300025961 Ga0207712_10004058 Ga0207712_1000405810 490
188 3300025961 Ga0207712_10010777 Ga0207712_100107772 490
189 3300025972 Ga0207668_10028430 Ga0207668_100284302 490
190 3300026041 Ga0207639_10017930 Ga0207639_100179304 490
191 3300026078 Ga0207702_10001532 Ga0207702_1000153214 490
192 3300026078 Ga0207702_10005183 Ga0207702_100051836 490
193 3300026078 Ga0207702_10083181 Ga0207702_100831812 490
194 3300026088 Ga0207641_10061080 Ga0207641_100610803 490
195 3300026088 Ga0207641_10223707 Ga0207641_102237071 490
196 3300026089 Ga0207648_10024630 Ga0207648_100246303 490
197 3300026116 Ga0207674_10001433 Ga0207674_100014337 490
198 3300026118 Ga0207675_100016451 Ga0207675_1000164513 490
199 3300026118 Ga0207675_100122026 Ga0207675_1001220262 490
200 3300027907 Ga0207428_10096689 Ga0207428_100966891 490
201 3300028381 Ga0268264_10001914 Ga0268264_1000191415 490
202 3300028794 Ga0307515_10011185 Ga0307515_100111853 490
203 3300028800 Ga0265338_10001166 Ga0265338_1000116623 490
204 3300031548 Ga0307408_100005619 Ga0307408_1000056195 490
205 3300031548 Ga0307408_100009517 Ga0307408_1000095175 490
206 3300031548 Ga0307408_100010275 Ga0307408_1000102753 490
207 3300031711 Ga0265314_10012795 Ga0265314_100127954 490
208 3300031711 Ga0265314_10028555 Ga0265314_100285552 490
209 3300032002 Ga0307416_100066835 Ga0307416_1000668352 490
210 3300032004 Ga0307414_10047385 Ga0307414_100473851 490
211 3300032005 Ga0307411_10095178 Ga0307411_100951783 490
212 3300035695 Ga0373927_0000516 Ga0373927_0000516_2897_4480 490
213 3300036712 Ga0316584_0007753 Ga0316584_0007753_4762_6237 490
214 3300037068 Ga0373925_0000854 Ga0373925_0000854_19804_21387 490
215 3300037312 Ga0395899_0000717 Ga0395899_0000717_25888_27378 490
216 3300037312 Ga0395899_0007644 Ga0395899_0007644_1482_2954 490
217 3300037418 Ga0395900_0000014 Ga0395900_0000014_209594_211084 490
218 3300037418 Ga0395900_0021850 Ga0395900_0021850_3419_4891 490
219 3300037466 Ga0395898_0024455 Ga0395898_0024455_682_2172 490
220 3300037471 Ga0395905_0000011 Ga0395905_0000011_207452_208927 490
221 3300037471 Ga0395905_0000037 Ga0395905_0000037_209584_211074 490
222 3300037471 Ga0395905_0001611 Ga0395905_0001611_7558_9030 490
223 3300037471 Ga0395905_0004029 Ga0395905_0004029_11029_12642 490
224 3300038443 Ga0395901_0000219 Ga0395901_0000219_18198_19688 490
225 3300038443 Ga0395901_0032957 Ga0395901_0032957_1966_3438 490
226 3300038443 Ga0395901_0146244 Ga0395901_0146244_703_2178 490
227 3300042128 Ga0450897_000185 Ga0450897_000185_769_2244 490
228 3300042435 Ga0439434_0004752 Ga0439434_0004752_1094_2569 490
229 3300042876 Ga0451577_0006749 Ga0451577_0006749_3393_4907 490
230 3300042876 Ga0451577_0069314 Ga0451577_0069314_1451_2926 490
231 3300042876 Ga0451577_0129196 Ga0451577_0129196_593_2068 490
232 3300044673 Ga0453683_0000005 Ga0453683_0000005_302973_304448 490
233 3300044673 Ga0453683_0039628 Ga0453683_0039628_1225_2700 490
234 3300044673 Ga0453683_0097818 Ga0453683_0097818_227_1813 490
235 3300044684 Ga0466966_0001023 Ga0466966_0001023_15544_17022 490
236 3300044712 Ga0453684_0000334 Ga0453684_0000334_44858_46333 490
237 3300044712 Ga0453684_0001234 Ga0453684_0001234_22581_24134 490
238 3300044842 Ga0466957_0000134 Ga0466957_0000134_3520_4998 490
239 3300044842 Ga0466957_0031514 Ga0466957_0031514_928_2406 490
240 3300045049 Ga0466959_0000111 Ga0466959_0000111_29756_31234 490
241 3300045051 Ga0451576_0048287 Ga0451576_0048287_924_2399 490
242 3300046453 Ga0495627_003040 Ga0495627_003040_5363_6838 490
243 3300046507 Ga0495606_0016823 Ga0495606_0016823_1596_3068 490
244 3300046522 Ga0495643_0001598 Ga0495643_0001598_8195_9667 490
245 3300046529 Ga0495652_0023951 Ga0495652_0023951_3897_5369 490
246 3300046558 Ga0495633_0000242 Ga0495633_0000242_14498_15973 490
247 3300046616 Ga0495668_0000175 Ga0495668_0000175_20512_21990 490
248 3300046660 Ga0495625_0027196 Ga0495625_0027196_1524_2996 490
249 3300047320 Ga0495672_0016581 Ga0495672_0016581_3217_4692 490
250 3300047320 Ga0495672_0016899 Ga0495672_0016899_2213_3688 490
251 3300048917 Ga0496114_0000297 Ga0496114_0000297_14246_15787 490
252 3300048917 Ga0496114_0129598 Ga0496114_0129598_228_1856 490
253 3300049570 Ga0501033_0010240 Ga0501033_0010240_2990_4465 490
254 3300049571 Ga0501034_0000373 Ga0501034_0000373_18351_19826 490
255 3300049571 Ga0501034_0002222 Ga0501034_0002222_9034_10509 490
256 3300049573 Ga0501037_0003388 Ga0501037_0003388_4849_6324 490
257 3300049574 Ga0501038_0027769 Ga0501038_0027769_699_2174 490
258 3300049575 Ga0501039_0016941 Ga0501039_0016941_1942_3417 490
259 3300049686 Ga0501257_006751 Ga0501257_006751_1003_2478 490
260 3300049705 Ga0501225_0001088 Ga0501225_0001088_442_1920 490
261 3300049822 Ga0501035_0030672 Ga0501035_0030672_911_2386 490
262 3300049822 Ga0501035_0107987 Ga0501035_0107987_918_2396 490
263 3300049823 Ga0501044_0007421 Ga0501044_0007421_5165_6640 490
264 3300049823 Ga0501044_0041504 Ga0501044_0041504_442_1920 490
265 3300050507 nmdc:mga05p37_8076_c1 nmdc:mga05p37_8076_c1_4521_5999 490
266 3300050508 nmdc:mga09592_10397_c1 nmdc:mga09592_10397_c1_2818_4296 490
267 3300050508 nmdc:mga09592_61763_c1 nmdc:mga09592_61763_c1_1326_2801 490
268 3300050509 nmdc:mga0qj67_55084_c1 nmdc:mga0qj67_55084_c1_1359_2837 490
269 3300050515 nmdc:mga0a205_152476_c1 nmdc:mga0a205_152476_c1_263_1813 490
270 3300053096 Ga0500641_0000123 Ga0500641_0000123_22475_23947 490
271 3300053156 Ga0500622_0003570 Ga0500622_0003570_7093_8565 490

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00587

tRNA-synt_2b

tRNA synthetase class II core domain (G, H, P, S and T)

206

381

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1hc7-assembly2.cif.gz_D prolyl-trna synthetase from thermus thermophilus 0.9493 3 490
1h4q-assembly1.cif.gz_A prolyl-trna synthetase from thermus thermophilus complexed with trnapro(cgg), atp and prolinol 0.9476 3 490
1hc7-assembly2.cif.gz_D prolyl-trna synthetase from thermus thermophilus 0.9473 3 490
1h4q-assembly1.cif.gz_A prolyl-trna synthetase from thermus thermophilus complexed with trnapro(cgg), atp and prolinol 0.9456 3 490
5xip-assembly2.cif.gz_D crystal structure of eimeria tenella prolyl-trna synthetase (etprs) in complex with halofuginone 0.9434 6 490
ID Description Score Start End Superfamily
af_A0A1D6E223_207_318_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9781 184 291 3.30.930.10
af_Q58635_274_391_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9476 294 411 3.40.50.800
af_P07814_1297_1421_3.40.50.800 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9407 294 411 3.40.50.800
1nj8A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Anticodon-binding domain 0.9357 294 398 3.40.50.800
af_A0A1D6E223_207_318_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.9356 184 291 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A3B0P1S0-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.9958 189 268 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A354GVD2-F1-model_v4 Proline--tRNA ligase (EC 6.1.1.15) 0.9937 169 309 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A812SZT6-F1-model_v4 deleted 0.9932 189 465
AF-A0A3D1AIA8-F1-model_v4 proline--tRNA ligase (EC 6.1.1.15) 0.9921 277 490 GO:0004827
GO:0005524
GO:0005737
GO:0006433
GO:0017101
AF-A0A2G1C5M5-F1-model_v4 deleted 0.9914 305 490

Feature Viewer

pLDDT pTM Quality
92.31 0.91 High
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Predicted Structure (AlphaFold2)

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