F377753

General Info

Members Datasets Scaffolds Average Seq Length
271 159 271 368

Family's Representative Sequence

Representative Sequence 3300031824|Ga0307413_10034835|Ga0307413_100348352
Length 392
Sequence MRTRAPSRLSVLVWKEFLEIRMNPRLVGIVIIAPILQLTMLGYAATTDVRDVPIVIADGDRSSSSRELVRRFDASRSFTVIDTVTTVSGIDRYLERGTAWLALSIPSGYGADVQAGRLTVVQVVADGTDSNSTTKALGYATALIGAYARELLELRGSAAVTVGAAIAPAEPTFNASPGGIDARIRVWFNPQLESRFFMIPGVLALVLLIVTTNLAAMAVVREKEIGTLEQLNVTPLRRWELIAGKLLPYGLIGMLDILLVIAVAVFWFEVPLRGSVWLLLAMSLLYVLCTLALGLLVSTVSDTQQQAMMTATFFFLMPMIYLSGFMTPIENMPQAIQWITYLIPLRYFLVIVRGIFLKGVGLGVLWPQAAALGAWGLVVISLAVVRSRKTLD

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
101 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
102 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
103 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
104 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
105 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
117 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
137 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
138 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
141 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
142 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
143 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
153 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
154 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
155 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
156 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.9
Nodule 0
Rhizoplane 9.23
Rhizosphere 84.87
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10000312 3300005290 Bacteria 25090
2 Ga0065712_10074082 3300005290 Bacteria 4191
3 Ga0065712_10102829 3300005290 Bacteria 1976
4 Ga0065712_10125571 3300005290 Bacteria 1612
5 Ga0065715_10002384 3300005293 Bacteria 6602
6 Ga0065715_10090559 3300005293 Bacteria 6821
7 Ga0065707_10086949 3300005295 Bacteria 5234
8 Ga0065707_10087445 3300005295 Bacteria 5021
9 Ga0070683_100000498 3300005329 Bacteria 27728
10 Ga0070690_100092958 3300005330 Bacteria 1989
11 Ga0070670_100003004 3300005331 Bacteria 13963
12 Ga0070670_100004084 3300005331 Bacteria 12192
13 Ga0070670_100007099 3300005331 Bacteria 9484
14 Ga0070670_100025358 3300005331 Bacteria 5102
15 Ga0070670_100146222 3300005331 Bacteria 2045
16 Ga0070689_100003721 3300005340 Bacteria 10207
17 Ga0070661_100076045 3300005344 Bacteria 2475
18 Ga0070668_100070743 3300005347 Bacteria 2717
19 Ga0070669_100096687 3300005353 Bacteria 2222
20 Ga0070675_100102296 3300005354 Bacteria 2414
21 Ga0070675_100156644 3300005354 Bacteria 1956
22 Ga0070675_100179660 3300005354 Unclassified 1829
23 Ga0070675_100187224 3300005354 Bacteria 1792
24 Ga0070688_100028222 3300005365 Bacteria 3348
25 Ga0070688_100252067 3300005365 Bacteria 1257
26 Ga0070659_100220487 3300005366 Bacteria 1565
27 Ga0070663_100062448 3300005455 Bacteria 2686
28 Ga0070663_100101036 3300005455 Bacteria 2152
29 Ga0070662_100010033 3300005457 Bacteria 6203
30 Ga0070685_10005754 3300005466 Bacteria 6300
31 Ga0070706_100240287 3300005467 Bacteria 1691
32 Ga0070679_100317212 3300005530 Bacteria 1508
33 Ga0070684_100000598 3300005535 Bacteria 24818
34 Ga0070684_100206295 3300005535 Bacteria 1791
35 Ga0070672_100017488 3300005543 Bacteria 5163
36 Ga0070686_100128317 3300005544 Bacteria 1751
37 Ga0070693_100015024 3300005547 Bacteria 3981
38 Ga0070704_100146448 3300005549 Bacteria 1851
39 Ga0070664_100001523 3300005564 Bacteria 18497
40 Ga0068857_100007796 3300005577 Bacteria 9229
41 Ga0068857_100022355 3300005577 Bacteria 5564
42 Ga0068852_100026477 3300005616 Unclassified 4714
43 Ga0068859_100172220 3300005617 Unclassified 2246
44 Ga0068864_100000927 3300005618 Bacteria 24622
45 Ga0068866_10061141 3300005718 Bacteria 1955
46 Ga0068870_10029542 3300005840 Unclassified 2762
47 Ga0068862_100010601 3300005844 Bacteria 7617
48 Ga0068862_100109709 3300005844 Bacteria 2421
49 Ga0075365_10003950 3300006038 Bacteria 7766
50 Ga0075368_10002111 3300006042 Bacteria 6416
51 Ga0075363_100008776 3300006048 Bacteria 4726
52 Ga0075364_10002266 3300006051 Bacteria 10797
53 Ga0075367_10004780 3300006178 Bacteria 6660
54 Ga0097621_100151916 3300006237 Bacteria 1986
55 Ga0075370_10009164 3300006353 Bacteria 5124
56 Ga0075428_100003339 3300006844 Bacteria 17563
57 Ga0075428_100010396 3300006844 Bacteria 10333
58 Ga0075430_100017779 3300006846 Bacteria 6053
59 Ga0075430_100018659 3300006846 Bacteria 5903
60 Ga0075431_100015237 3300006847 Bacteria 7792
61 Ga0075431_100030629 3300006847 Bacteria 5543
62 Ga0075431_100067275 3300006847 Bacteria 3698
63 Ga0075433_10087167 3300006852 Unclassified 2757
64 Ga0075434_100013089 3300006871 Bacteria 7878
65 Ga0075434_100016994 3300006871 Bacteria 7000
66 Ga0075429_100088492 3300006880 Bacteria 2699
67 Ga0075429_100123994 3300006880 Bacteria 2259
68 Ga0068865_100094628 3300006881 Bacteria 2175
69 Ga0097620_100172218 3300006931 Unclassified 2246
70 Ga0075435_100020791 3300007076 Bacteria 5037
71 Ga0111539_10003880 3300009094 Bacteria 19677
72 Ga0111539_10009013 3300009094 Bacteria 12626
73 Ga0111539_10021734 3300009094 Bacteria 7889
74 Ga0111539_10057665 3300009094 Bacteria 4610
75 Ga0111539_10319504 3300009094 Bacteria 1807
76 Ga0111539_10394047 3300009094 Bacteria 1613
77 Ga0111539_10410129 3300009094 Bacteria 1578
78 Ga0105245_10345376 3300009098 Unclassified 1473
79 Ga0114129_10013345 3300009147 Bacteria 11704
80 Ga0114129_10026699 3300009147 Bacteria 8179
81 Ga0105241_10032014 3300009174 Bacteria 3938
82 Ga0105249_10003741 3300009553 Bacteria 13129
83 Ga0105239_10086411 3300010375 Bacteria 3457
84 Ga0105239_10270811 3300010375 Bacteria 1910
85 Ga0157374_10234650 3300013296 Unclassified 1803
86 Ga0163162_10016032 3300013306 Bacteria 7325
87 Ga0157375_10304591 3300013308 Bacteria 1757
88 Ga0163163_10000034 3300014325 Bacteria 161820
89 Ga0163163_10012371 3300014325 Bacteria 7774
90 Ga0163163_10079655 3300014325 Unclassified 3274
91 Ga0157380_10016048 3300014326 Bacteria 5516
92 Ga0207697_10037869 3300025315 Unclassified 1977
93 Ga0207697_10038483 3300025315 Bacteria 1961
94 Ga0207682_10045581 3300025893 Bacteria 1800
95 Ga0207688_10016931 3300025901 Bacteria 3960
96 Ga0207688_10064314 3300025901 Bacteria 2071
97 Ga0207680_10082036 3300025903 Unclassified 2028
98 Ga0207645_10091708 3300025907 Bacteria 1954
99 Ga0207649_10083266 3300025920 Bacteria 2076
100 Ga0207652_10283649 3300025921 Bacteria 1494
101 Ga0207681_10040974 3300025923 Bacteria 3085
102 Ga0207650_10000790 3300025925 Bacteria 24361
103 Ga0207650_10009770 3300025925 Bacteria 6559
104 Ga0207650_10017091 3300025925 Bacteria 5078
105 Ga0207650_10106161 3300025925 Bacteria 2169
106 Ga0207659_10046735 3300025926 Bacteria 3059
107 Ga0207659_10110394 3300025926 Bacteria 2090
108 Ga0207659_10197228 3300025926 Bacteria 1605
109 Ga0207706_10018866 3300025933 Bacteria 6204
110 Ga0207706_10067961 3300025933 Bacteria 3136
111 Ga0207706_10094959 3300025933 Bacteria 2623
112 Ga0207686_10142994 3300025934 Unclassified 1656
113 Ga0207669_10024911 3300025937 Bacteria 3224
114 Ga0207704_10007242 3300025938 Bacteria 5225
115 Ga0207704_10268368 3300025938 Bacteria 1291
116 Ga0207691_10042076 3300025940 Bacteria 4213
117 Ga0207691_10120751 3300025940 Unclassified 2323
118 Ga0207711_10068734 3300025941 Bacteria 3069
119 Ga0207711_10118106 3300025941 Bacteria 2366
120 Ga0207679_10006102 3300025945 Bacteria 7602
121 Ga0207668_10309437 3300025972 Bacteria 1307
122 Ga0207703_10160289 3300026035 Bacteria 1970
123 Ga0207639_10033419 3300026041 Bacteria 3795
124 Ga0207678_10080948 3300026067 Bacteria 2780
125 Ga0207678_10136437 3300026067 Unclassified 2093
126 Ga0207641_10028886 3300026088 Bacteria 4584
127 Ga0207641_10061550 3300026088 Bacteria 3201
128 Ga0207676_10015793 3300026095 Bacteria 5459
129 Ga0207676_10248044 3300026095 Unclassified 1601
130 Ga0207674_10004743 3300026116 Bacteria 16304
131 Ga0207675_100244418 3300026118 Bacteria 1735
132 Ga0207683_10010413 3300026121 Bacteria 7931
133 Ga0209813_10014554 3300027866 Bacteria 2119
134 Ga0207428_10009824 3300027907 Bacteria 8573
135 Ga0207428_10029758 3300027907 Bacteria 4520
136 Ga0207428_10041219 3300027907 Bacteria 3739
137 Ga0268266_10027315 3300028379 Bacteria 4854
138 Ga0268266_10129640 3300028379 Bacteria 2254
139 Ga0268265_10020798 3300028380 Unclassified 4586
140 Ga0268265_10124163 3300028380 Bacteria 2133
141 Ga0307408_100097086 3300031548 Bacteria 2237
142 Ga0307408_100101831 3300031548 Unclassified 2189
143 Ga0307408_100208889 3300031548 Unclassified 1585
144 Ga0307405_10253650 3300031731 Unclassified 1310
145 Ga0307413_10034835 3300031824 Bacteria 2881
146 Ga0307413_10038016 3300031824 Unclassified 2786
147 Ga0307413_10262353 3300031824 Bacteria 1289
148 Ga0307409_100040747 3300031995 Bacteria 3462
149 Ga0307409_100125590 3300031995 Bacteria 2181
150 Ga0307409_100458989 3300031995 Bacteria 1231
151 Ga0307416_100023719 3300032002 Unclassified 4460
152 Ga0307416_100031320 3300032002 Bacteria 4002
153 Ga0307416_100241599 3300032002 Bacteria 1750
154 Ga0307416_100287059 3300032002 Bacteria 1626
155 Ga0307414_10043863 3300032004 Bacteria 3050
156 Ga0307415_100072357 3300032126 Unclassified 2428
157 Ga0307415_100275249 3300032126 Unclassified 1381
158 Ga0373934_0001486 3300035086 Bacteria 8604
159 Ga0373955_0114170 3300035172 Bacteria 1564
160 Ga0373933_0038911 3300035724 Bacteria 2796
161 Ga0373937_0000037 3300036401 Bacteria 111413
162 Ga0373937_0132924 3300036401 Bacteria 2325
163 Ga0439439_0023680 3300041406 Bacteria 1539
164 Ga0450896_002268 3300042133 Bacteria 2471
165 Ga0450896_002517 3300042133 Bacteria 2371
166 Ga0439446_0003786 3300042156 Bacteria 3785
167 Ga0439435_0039415 3300042436 Bacteria 1317
168 Ga0439464_0009366 3300042439 Bacteria 2577
169 Ga0451577_0031094 3300042876 Bacteria 4819
170 Ga0451577_0051960 3300042876 Bacteria 3659
171 Ga0453684_0036800 3300044712 Bacteria 6736
172 Ga0453684_0248836 3300044712 Bacteria 2042
173 Ga0495621_0012166 3300046539 Bacteria 2678
174 Ga0495634_0053547 3300046642 Bacteria 2703
175 Ga0495600_0038500 3300046809 Bacteria 3112
176 Ga0496100_0040463 3300048903 Bacteria 2966
177 Ga0496101_0101641 3300048904 Unclassified 2153
178 Ga0496103_0039811 3300048906 Bacteria 2889
179 Ga0496103_0070375 3300048906 Bacteria 2189
180 Ga0496104_0011324 3300048907 Bacteria 7984
181 Ga0496104_0016022 3300048907 Bacteria 6806
182 Ga0496104_0219078 3300048907 Bacteria 1815
183 Ga0496105_0096757 3300048908 Bacteria 2438
184 Ga0496106_0083570 3300048909 Unclassified 2456
185 Ga0496106_0085295 3300048909 Bacteria 2432
186 Ga0496106_0087167 3300048909 Bacteria 2405
187 Ga0496108_0001173 3300048911 Bacteria 20434
188 Ga0496108_0005648 3300048911 Bacteria 10129
189 Ga0496109_0000830 3300048912 Bacteria 25791
190 Ga0496109_0002812 3300048912 Bacteria 14574
191 Ga0496110_0005368 3300048913 Bacteria 10042
192 Ga0496110_0014485 3300048913 Bacteria 6550
193 Ga0496110_0145167 3300048913 Bacteria 2146
194 Ga0496111_0007608 3300048914 Bacteria 7117
195 Ga0496111_0095878 3300048914 Bacteria 2177
196 Ga0496112_0066150 3300048915 Bacteria 3567
197 Ga0496113_0013002 3300048916 Bacteria 5617
198 Ga0496114_0001367 3300048917 Bacteria 18499
199 Ga0496114_0223343 3300048917 Bacteria 1654
200 Ga0496114_0591884 3300048917 Bacteria 978
201 Ga0501034_0002575 3300049571 Bacteria 21577
202 Ga0501034_0244596 3300049571 Bacteria 1739
203 Ga0501036_0215678 3300049572 Bacteria 1612
204 Ga0501039_0042936 3300049575 Bacteria 3493
205 Ga0501040_0026307 3300049576 Bacteria 3913
206 Ga0501040_0037175 3300049576 Bacteria 3307
207 Ga0501041_0066827 3300049577 Bacteria 2204
208 Ga0501048_0165245 3300049582 Bacteria 1567
209 Ga0501071_0013334 3300049587 Bacteria 5599
210 Ga0501071_0184448 3300049587 Bacteria 1564
211 Ga0501072_0171793 3300049588 Bacteria 1730
212 Ga0501073_0012025 3300049589 Bacteria 6320
213 Ga0501075_0020492 3300049591 Bacteria 4812
214 Ga0501075_0053008 3300049591 Bacteria 3050
215 Ga0501075_0106480 3300049591 Bacteria 2131
216 Ga0501076_0009866 3300049592 Bacteria 7059
217 Ga0501076_0029726 3300049592 Bacteria 4251
218 Ga0501076_0105472 3300049592 Bacteria 2275
219 Ga0501079_0130729 3300049741 Bacteria 1954
220 Ga0501079_0195551 3300049741 Bacteria 1579
221 Ga0501081_0018871 3300049743 Bacteria 4583
222 Ga0501081_0030066 3300049743 Bacteria 3675
223 Ga0501045_0006939 3300049824 Bacteria 7850
224 Ga0501045_0008740 3300049824 Bacteria 7065
225 Ga0501045_0254642 3300049824 Bacteria 1307
226 Ga0501045_0281509 3300049824 Bacteria 1238
227 nmdc:mga03683_715_c1 3300050489 Bacteria 9540
228 nmdc:mga00v17_12731_c1 3300050491 Bacteria 4647
229 nmdc:mga0yw44_24625_c1 3300050492 Bacteria 3409
230 nmdc:mga0yw44_28697_c1 3300050492 Bacteria 3204
231 nmdc:mga0k408_107028_c1 3300050493 Bacteria 1652
232 nmdc:mga06z11_23271_c1 3300050494 Bacteria 2908
233 nmdc:mga06z11_89096_c1 3300050494 Bacteria 1672
234 nmdc:mga04h51_17036_c1 3300050495 Bacteria 2118
235 nmdc:mga07m45_19164_c1 3300050496 Bacteria 3704
236 nmdc:mga05p37_24737_c1 3300050507 Bacteria 7299
237 nmdc:mga05p37_25481_c1 3300050507 Bacteria 7194
238 nmdc:mga05p37_378697_c1 3300050507 Bacteria 1659
239 nmdc:mga05p37_4325_c2 3300050507 Bacteria 16242
240 nmdc:mga05p37_85265_c1 3300050507 Bacteria 3892
241 nmdc:mga09592_89520_c1 3300050508 Bacteria 2629
242 nmdc:mga0qj67_44481_c1 3300050509 Unclassified 3500
243 nmdc:mga0qj67_49275_c1 3300050509 Bacteria 3330
244 nmdc:mga06r32_106917_c1 3300050510 Bacteria 2749
245 nmdc:mga06r32_23714_c1 3300050510 Bacteria 5682
246 nmdc:mga06r32_2453_c1 3300050510 Bacteria 16589
247 nmdc:mga08y16_22220_c1 3300050511 Bacteria 6695
248 nmdc:mga08y16_223732_c1 3300050511 Bacteria 1947
249 nmdc:mga08y16_363325_c1 3300050511 Bacteria 1486
250 nmdc:mga08y16_58550_c1 3300050511 Bacteria 4026
251 nmdc:mga08y16_73270_c1 3300050511 Bacteria 3568
252 nmdc:mga08y16_84999_c1 3300050511 Unclassified 3297
253 nmdc:mga08y16_9764_c1 3300050511 Bacteria 10079
254 nmdc:mga0n895_100037_c1 3300050512 Bacteria 2908
255 nmdc:mga0n895_25080_c1 3300050512 Bacteria 5629
256 nmdc:mga0a205_27127_c1 3300050515 Bacteria 5468
257 nmdc:mga0a205_3602_c1 3300050515 Bacteria 13865
258 Ga0495601_0011354 3300053077 Bacteria 5324
259 Ga0495619_0043097 3300053085 Bacteria 2957
260 Ga0501084_0324758 3300054114 Bacteria 1300
261 Ga0590071_001059 3300059421 Bacteria 7449
262 Ga0590071_001086 3300059421 Bacteria 7354
263 Ga0590074_000166 3300059423 Bacteria 8048
264 Ga0590075_000123 3300059424 Bacteria 19905
265 Ga0590075_013622 3300059424 Unclassified 1983
266 Ga0590077_000109 3300059426 Bacteria 21950
267 Ga0590077_000841 3300059426 Bacteria 7907
268 Ga0501082_0016029 3300060353 Bacteria 6447
269 Ga0530510_0103636 3300061734 Bacteria 2081
270 Ga0530510_0236710 3300061734 Bacteria 1359
271 Ga0530510_0256559 3300061734 Bacteria 1303

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049741 Ga0501079_0195551 Ga0501079_0195551_596_1534 292
2 3300048917 Ga0496114_0591884 Ga0496114_0591884_19_966 307
3 3300048915 Ga0496112_0066150 Ga0496112_0066150_1430_2551 318
4 3300050515 nmdc:mga0a205_3602_c1 nmdc:mga0a205_3602_c1_3102_4169 333
5 3300031548 Ga0307408_100208889 Ga0307408_1002088891 336
6 3300032002 Ga0307416_100023719 Ga0307416_1000237193 336
7 3300032126 Ga0307415_100072357 Ga0307415_1000723572 336
8 3300025972 Ga0207668_10309437 Ga0207668_103094371 338
9 3300009098 Ga0105245_10345376 Ga0105245_103453761 344
10 3300049571 Ga0501034_0244596 Ga0501034_0244596_557_1651 344
11 3300049577 Ga0501041_0066827 Ga0501041_0066827_962_2104 344
12 3300049591 Ga0501075_0106480 Ga0501075_0106480_45_1187 344
13 3300049592 Ga0501076_0105472 Ga0501076_0105472_1056_2198 344
14 3300049743 Ga0501081_0018871 Ga0501081_0018871_190_1332 344
15 3300049824 Ga0501045_0281509 Ga0501045_0281509_38_1180 344
16 3300060353 Ga0501082_0016029 Ga0501082_0016029_5295_6437 344
17 3300061734 Ga0530510_0103636 Ga0530510_0103636_182_1324 344
18 3300005330 Ga0070690_100092958 Ga0070690_1000929582 345
19 3300049571 Ga0501034_0002575 Ga0501034_0002575_9647_10765 345
20 3300049575 Ga0501039_0042936 Ga0501039_0042936_1999_3117 345
21 3300049576 Ga0501040_0026307 Ga0501040_0026307_2702_3820 345
22 3300049591 Ga0501075_0053008 Ga0501075_0053008_820_1938 345
23 3300049592 Ga0501076_0029726 Ga0501076_0029726_295_1413 345
24 3300061734 Ga0530510_0256559 Ga0530510_0256559_158_1276 345
25 3300006237 Ga0097621_100151916 Ga0097621_1001519161 347
26 3300050507 nmdc:mga05p37_25481_c1 nmdc:mga05p37_25481_c1_4998_6110 348
27 3300059421 Ga0590071_001086 Ga0590071_001086_3689_4804 348
28 3300059424 Ga0590075_013622 Ga0590075_013622_84_1199 348
29 3300059426 Ga0590077_000841 Ga0590077_000841_5164_6285 348
30 3300049572 Ga0501036_0215678 Ga0501036_0215678_444_1556 350
31 3300049591 Ga0501075_0020492 Ga0501075_0020492_308_1420 350
32 3300054114 Ga0501084_0324758 Ga0501084_0324758_79_1191 350
33 3300061734 Ga0530510_0236710 Ga0530510_0236710_78_1190 350
34 3300014326 Ga0157380_10016048 Ga0157380_100160485 351
35 3300027907 Ga0207428_10029758 Ga0207428_100297583 351
36 3300035086 Ga0373934_0001486 Ga0373934_0001486_6245_7363 351
37 3300035172 Ga0373955_0114170 Ga0373955_0114170_69_1187 351
38 3300035724 Ga0373933_0038911 Ga0373933_0038911_1518_2636 351
39 3300036401 Ga0373937_0000037 Ga0373937_0000037_83903_85021 351
40 3300042156 Ga0439446_0003786 Ga0439446_0003786_2652_3752 351
41 3300050511 nmdc:mga08y16_58550_c1 nmdc:mga08y16_58550_c1_951_2048 351
42 3300006844 Ga0075428_100003339 Ga0075428_10000333913 352
43 3300006880 Ga0075429_100088492 Ga0075429_1000884922 352
44 3300009094 Ga0111539_10009013 Ga0111539_100090133 352
45 3300014325 Ga0163163_10000034 Ga0163163_10000034137 352
46 3300025941 Ga0207711_10118106 Ga0207711_101181062 352
47 3300026035 Ga0207703_10160289 Ga0207703_101602892 352
48 3300027907 Ga0207428_10009824 Ga0207428_100098243 352
49 3300031548 Ga0307408_100097086 Ga0307408_1000970862 352
50 3300031824 Ga0307413_10262353 Ga0307413_102623532 352
51 3300031995 Ga0307409_100458989 Ga0307409_1004589892 352
52 3300032002 Ga0307416_100287059 Ga0307416_1002870592 352
53 3300042439 Ga0439464_0009366 Ga0439464_0009366_452_1564 352
54 3300048913 Ga0496110_0145167 Ga0496110_0145167_271_1386 352
55 3300048917 Ga0496114_0223343 Ga0496114_0223343_65_1180 352
56 3300050507 nmdc:mga05p37_4325_c2 nmdc:mga05p37_4325_c2_3853_4965 352
57 3300050508 nmdc:mga09592_89520_c1 nmdc:mga09592_89520_c1_1503_2615 352
58 3300050509 nmdc:mga0qj67_49275_c1 nmdc:mga0qj67_49275_c1_399_1511 352
59 3300046539 Ga0495621_0012166 Ga0495621_0012166_1041_2138 353
60 3300005467 Ga0070706_100240287 Ga0070706_1002402871 354
61 3300042133 Ga0450896_002517 Ga0450896_002517_1042_2169 354
62 3300049582 Ga0501048_0165245 Ga0501048_0165245_188_1318 354
63 3300049587 Ga0501071_0184448 Ga0501071_0184448_28_1158 354
64 3300049741 Ga0501079_0130729 Ga0501079_0130729_666_1796 354
65 3300049824 Ga0501045_0254642 Ga0501045_0254642_158_1288 354
66 3300009094 Ga0111539_10319504 Ga0111539_103195042 355
67 3300009094 Ga0111539_10394047 Ga0111539_103940472 355
68 3300026118 Ga0207675_100244418 Ga0207675_1002444182 355
69 3300050511 nmdc:mga08y16_363325_c1 nmdc:mga08y16_363325_c1_223_1338 355
70 3300048908 Ga0496105_0096757 Ga0496105_0096757_1161_2267 356
71 3300049576 Ga0501040_0037175 Ga0501040_0037175_1109_2221 357
72 3300049587 Ga0501071_0013334 Ga0501071_0013334_2648_3760 357
73 3300049824 Ga0501045_0008740 Ga0501045_0008740_3739_4851 357
74 3300010375 Ga0105239_10270811 Ga0105239_102708112 358
75 3300027907 Ga0207428_10041219 Ga0207428_100412192 358
76 3300050511 nmdc:mga08y16_22220_c1 nmdc:mga08y16_22220_c1_1530_2654 358
77 3300059421 Ga0590071_001059 Ga0590071_001059_4605_5744 358
78 3300059423 Ga0590074_000166 Ga0590074_000166_3665_4804 358
79 3300059424 Ga0590075_000123 Ga0590075_000123_14282_15421 358
80 3300059426 Ga0590077_000109 Ga0590077_000109_12782_13921 358
81 3300014325 Ga0163163_10012371 Ga0163163_100123714 359
82 3300025315 Ga0207697_10037869 Ga0207697_100378691 360
83 3300025907 Ga0207645_10091708 Ga0207645_100917083 360
84 3300048906 Ga0496103_0039811 Ga0496103_0039811_1538_2653 360
85 3300048914 Ga0496111_0095878 Ga0496111_0095878_890_2005 360
86 3300006847 Ga0075431_100067275 Ga0075431_1000672754 361
87 3300042133 Ga0450896_002268 Ga0450896_002268_947_2074 361
88 3300042876 Ga0451577_0051960 Ga0451577_0051960_969_2090 361
89 3300044712 Ga0453684_0036800 Ga0453684_0036800_1482_2603 361
90 3300050510 nmdc:mga06r32_2453_c1 nmdc:mga06r32_2453_c1_690_1802 361
91 3300006846 Ga0075430_100017779 Ga0075430_1000177792 364
92 3300006847 Ga0075431_100030629 Ga0075431_1000306292 364
93 3300009094 Ga0111539_10410129 Ga0111539_104101291 364
94 3300009147 Ga0114129_10013345 Ga0114129_100133457 364
95 3300025938 Ga0207704_10268368 Ga0207704_102683682 364
96 3300050507 nmdc:mga05p37_24737_c1 nmdc:mga05p37_24737_c1_4062_5177 364
97 3300050509 nmdc:mga0qj67_44481_c1 nmdc:mga0qj67_44481_c1_412_1527 364
98 3300005290 Ga0065712_10125571 Ga0065712_101255711 365
99 3300005455 Ga0070663_100062448 Ga0070663_1000624482 365
100 3300026067 Ga0207678_10080948 Ga0207678_100809482 365
101 3300005290 Ga0065712_10074082 Ga0065712_100740823 367
102 3300005354 Ga0070675_100102296 Ga0070675_1001022962 367
103 3300009094 Ga0111539_10021734 Ga0111539_100217345 367
104 3300025926 Ga0207659_10046735 Ga0207659_100467352 367
105 3300050510 nmdc:mga06r32_106917_c1 nmdc:mga06r32_106917_c1_1569_2708 367
106 3300050511 nmdc:mga08y16_73270_c1 nmdc:mga08y16_73270_c1_1969_3087 367
107 3300006038 Ga0075365_10003950 Ga0075365_100039504 368
108 3300006042 Ga0075368_10002111 Ga0075368_100021116 368
109 3300006048 Ga0075363_100008776 Ga0075363_1000087762 368
110 3300006353 Ga0075370_10009164 Ga0075370_100091643 368
111 3300006846 Ga0075430_100018659 Ga0075430_1000186592 368
112 3300006871 Ga0075434_100013089 Ga0075434_1000130892 368
113 3300006880 Ga0075429_100123994 Ga0075429_1001239942 368
114 3300025926 Ga0207659_10197228 Ga0207659_101972281 368
115 3300025933 Ga0207706_10067961 Ga0207706_100679612 368
116 3300025940 Ga0207691_10120751 Ga0207691_101207511 368
117 3300026067 Ga0207678_10136437 Ga0207678_101364372 368
118 3300050491 nmdc:mga00v17_12731_c1 nmdc:mga00v17_12731_c1_1885_3036 368
119 3300050492 nmdc:mga0yw44_24625_c1 nmdc:mga0yw44_24625_c1_1526_2635 368
120 3300050492 nmdc:mga0yw44_28697_c1 nmdc:mga0yw44_28697_c1_1465_2616 368
121 3300050494 nmdc:mga06z11_23271_c1 nmdc:mga06z11_23271_c1_29_1180 368
122 3300050496 nmdc:mga07m45_19164_c1 nmdc:mga07m45_19164_c1_565_1716 368
123 3300050507 nmdc:mga05p37_378697_c1 nmdc:mga05p37_378697_c1_331_1443 368
124 3300031995 Ga0307409_100040747 Ga0307409_1000407472 369
125 3300025937 Ga0207669_10024911 Ga0207669_100249112 370
126 3300032002 Ga0307416_100241599 Ga0307416_1002415992 370
127 3300042436 Ga0439435_0039415 Ga0439435_0039415_134_1252 370
128 3300050511 nmdc:mga08y16_223732_c1 nmdc:mga08y16_223732_c1_764_1882 370
129 3300005290 Ga0065712_10102829 Ga0065712_101028292 371
130 3300005293 Ga0065715_10002384 Ga0065715_100023842 371
131 3300005295 Ga0065707_10086949 Ga0065707_100869492 371
132 3300005329 Ga0070683_100000498 Ga0070683_10000049818 371
133 3300005331 Ga0070670_100004084 Ga0070670_1000040848 371
134 3300005331 Ga0070670_100007099 Ga0070670_1000070993 371
135 3300005331 Ga0070670_100025358 Ga0070670_1000253581 371
136 3300005340 Ga0070689_100003721 Ga0070689_1000037214 371
137 3300005344 Ga0070661_100076045 Ga0070661_1000760453 371
138 3300005354 Ga0070675_100179660 Ga0070675_1001796602 371
139 3300005366 Ga0070659_100220487 Ga0070659_1002204872 371
140 3300005530 Ga0070679_100317212 Ga0070679_1003172122 371
141 3300005535 Ga0070684_100000598 Ga0070684_1000005988 371
142 3300005547 Ga0070693_100015024 Ga0070693_1000150242 371
143 3300005549 Ga0070704_100146448 Ga0070704_1001464482 371
144 3300005564 Ga0070664_100001523 Ga0070664_1000015237 371
145 3300005577 Ga0068857_100007796 Ga0068857_1000077965 371
146 3300005577 Ga0068857_100022355 Ga0068857_1000223552 371
147 3300005617 Ga0068859_100172220 Ga0068859_1001722202 371
148 3300005840 Ga0068870_10029542 Ga0068870_100295422 371
149 3300005844 Ga0068862_100010601 Ga0068862_1000106013 371
150 3300006051 Ga0075364_10002266 Ga0075364_100022669 371
151 3300006178 Ga0075367_10004780 Ga0075367_100047803 371
152 3300006844 Ga0075428_100010396 Ga0075428_1000103963 371
153 3300006847 Ga0075431_100015237 Ga0075431_1000152377 371
154 3300006871 Ga0075434_100016994 Ga0075434_1000169942 371
155 3300006931 Ga0097620_100172218 Ga0097620_1001722182 371
156 3300007076 Ga0075435_100020791 Ga0075435_1000207913 371
157 3300009094 Ga0111539_10003880 Ga0111539_100038803 371
158 3300009094 Ga0111539_10057665 Ga0111539_100576653 371
159 3300009147 Ga0114129_10026699 Ga0114129_100266994 371
160 3300009553 Ga0105249_10003741 Ga0105249_100037415 371
161 3300013296 Ga0157374_10234650 Ga0157374_102346502 371
162 3300014325 Ga0163163_10079655 Ga0163163_100796553 371
163 3300025893 Ga0207682_10045581 Ga0207682_100455812 371
164 3300025901 Ga0207688_10016931 Ga0207688_100169314 371
165 3300025920 Ga0207649_10083266 Ga0207649_100832662 371
166 3300025921 Ga0207652_10283649 Ga0207652_102836492 371
167 3300025925 Ga0207650_10000790 Ga0207650_1000079023 371
168 3300025925 Ga0207650_10009770 Ga0207650_100097703 371
169 3300025925 Ga0207650_10106161 Ga0207650_101061612 371
170 3300025945 Ga0207679_10006102 Ga0207679_100061022 371
171 3300026088 Ga0207641_10028886 Ga0207641_100288862 371
172 3300026095 Ga0207676_10248044 Ga0207676_102480442 371
173 3300026116 Ga0207674_10004743 Ga0207674_100047438 371
174 3300027866 Ga0209813_10014554 Ga0209813_100145542 371
175 3300028379 Ga0268266_10027315 Ga0268266_100273154 371
176 3300028380 Ga0268265_10020798 Ga0268265_100207983 371
177 3300031548 Ga0307408_100101831 Ga0307408_1001018312 371
178 3300031731 Ga0307405_10253650 Ga0307405_102536502 371
179 3300031824 Ga0307413_10038016 Ga0307413_100380162 371
180 3300032002 Ga0307416_100031320 Ga0307416_1000313202 371
181 3300032126 Ga0307415_100275249 Ga0307415_1002752492 371
182 3300042876 Ga0451577_0031094 Ga0451577_0031094_3183_4337 371
183 3300044712 Ga0453684_0248836 Ga0453684_0248836_863_2017 371
184 3300048907 Ga0496104_0011324 Ga0496104_0011324_926_2062 371
185 3300048909 Ga0496106_0085295 Ga0496106_0085295_105_1271 371
186 3300048909 Ga0496106_0087167 Ga0496106_0087167_1246_2361 371
187 3300048911 Ga0496108_0001173 Ga0496108_0001173_3992_5128 371
188 3300048912 Ga0496109_0002812 Ga0496109_0002812_4370_5506 371
189 3300048913 Ga0496110_0014485 Ga0496110_0014485_2068_3204 371
190 3300049588 Ga0501072_0171793 Ga0501072_0171793_157_1287 371
191 3300049592 Ga0501076_0009866 Ga0501076_0009866_4515_5645 371
192 3300049743 Ga0501081_0030066 Ga0501081_0030066_439_1569 371
193 3300049824 Ga0501045_0006939 Ga0501045_0006939_5294_6424 371
194 3300050489 nmdc:mga03683_715_c1 nmdc:mga03683_715_c1_7243_8391 371
195 3300050493 nmdc:mga0k408_107028_c1 nmdc:mga0k408_107028_c1_473_1621 371
196 3300050494 nmdc:mga06z11_89096_c1 nmdc:mga06z11_89096_c1_291_1439 371
197 3300050495 nmdc:mga04h51_17036_c1 nmdc:mga04h51_17036_c1_905_2053 371
198 3300050507 nmdc:mga05p37_85265_c1 nmdc:mga05p37_85265_c1_368_1504 371
199 3300050510 nmdc:mga06r32_23714_c1 nmdc:mga06r32_23714_c1_1745_2881 371
200 3300050511 nmdc:mga08y16_84999_c1 nmdc:mga08y16_84999_c1_1907_3037 371
201 3300050511 nmdc:mga08y16_9764_c1 nmdc:mga08y16_9764_c1_2142_3278 371
202 3300050512 nmdc:mga0n895_100037_c1 nmdc:mga0n895_100037_c1_1560_2678 371
203 3300050512 nmdc:mga0n895_25080_c1 nmdc:mga0n895_25080_c1_3376_4512 371
204 3300050515 nmdc:mga0a205_27127_c1 nmdc:mga0a205_27127_c1_1750_2886 371
205 3300049589 Ga0501073_0012025 Ga0501073_0012025_2861_3997 373
206 3300005290 Ga0065712_10000312 Ga0065712_100003129 375
207 3300005293 Ga0065715_10090559 Ga0065715_100905593 375
208 3300005295 Ga0065707_10087445 Ga0065707_100874452 375
209 3300005331 Ga0070670_100003004 Ga0070670_1000030044 375
210 3300005331 Ga0070670_100146222 Ga0070670_1001462222 375
211 3300005347 Ga0070668_100070743 Ga0070668_1000707432 375
212 3300005353 Ga0070669_100096687 Ga0070669_1000966872 375
213 3300005354 Ga0070675_100156644 Ga0070675_1001566442 375
214 3300005354 Ga0070675_100187224 Ga0070675_1001872242 375
215 3300005365 Ga0070688_100028222 Ga0070688_1000282222 375
216 3300005365 Ga0070688_100252067 Ga0070688_1002520671 375
217 3300005455 Ga0070663_100101036 Ga0070663_1001010362 375
218 3300005457 Ga0070662_100010033 Ga0070662_1000100333 375
219 3300005466 Ga0070685_10005754 Ga0070685_100057544 375
220 3300005535 Ga0070684_100206295 Ga0070684_1002062952 375
221 3300005543 Ga0070672_100017488 Ga0070672_1000174882 375
222 3300005544 Ga0070686_100128317 Ga0070686_1001283171 375
223 3300005616 Ga0068852_100026477 Ga0068852_1000264773 375
224 3300005618 Ga0068864_100000927 Ga0068864_10000092710 375
225 3300005718 Ga0068866_10061141 Ga0068866_100611412 375
226 3300005844 Ga0068862_100109709 Ga0068862_1001097092 375
227 3300006852 Ga0075433_10087167 Ga0075433_100871673 375
228 3300006881 Ga0068865_100094628 Ga0068865_1000946281 375
229 3300009174 Ga0105241_10032014 Ga0105241_100320142 375
230 3300010375 Ga0105239_10086411 Ga0105239_100864112 375
231 3300013306 Ga0163162_10016032 Ga0163162_100160324 375
232 3300013308 Ga0157375_10304591 Ga0157375_103045912 375
233 3300025315 Ga0207697_10038483 Ga0207697_100384832 375
234 3300025901 Ga0207688_10064314 Ga0207688_100643142 375
235 3300025903 Ga0207680_10082036 Ga0207680_100820362 375
236 3300025923 Ga0207681_10040974 Ga0207681_100409742 375
237 3300025925 Ga0207650_10017091 Ga0207650_100170914 375
238 3300025926 Ga0207659_10110394 Ga0207659_101103942 375
239 3300025933 Ga0207706_10018866 Ga0207706_100188664 375
240 3300025933 Ga0207706_10094959 Ga0207706_100949592 375
241 3300025934 Ga0207686_10142994 Ga0207686_101429942 375
242 3300025938 Ga0207704_10007242 Ga0207704_100072423 375
243 3300025940 Ga0207691_10042076 Ga0207691_100420764 375
244 3300025941 Ga0207711_10068734 Ga0207711_100687343 375
245 3300026041 Ga0207639_10033419 Ga0207639_100334193 375
246 3300026088 Ga0207641_10061550 Ga0207641_100615503 375
247 3300026095 Ga0207676_10015793 Ga0207676_100157935 375
248 3300026121 Ga0207683_10010413 Ga0207683_100104133 375
249 3300028379 Ga0268266_10129640 Ga0268266_101296402 375
250 3300028380 Ga0268265_10124163 Ga0268265_101241632 375
251 3300031824 Ga0307413_10034835 Ga0307413_100348352 375
252 3300031995 Ga0307409_100125590 Ga0307409_1001255902 375
253 3300032004 Ga0307414_10043863 Ga0307414_100438632 375
254 3300036401 Ga0373937_0132924 Ga0373937_0132924_780_1907 375
255 3300041406 Ga0439439_0023680 Ga0439439_0023680_287_1417 375
256 3300046642 Ga0495634_0053547 Ga0495634_0053547_1179_2306 375
257 3300046809 Ga0495600_0038500 Ga0495600_0038500_75_1202 375
258 3300048903 Ga0496100_0040463 Ga0496100_0040463_1417_2544 375
259 3300048904 Ga0496101_0101641 Ga0496101_0101641_68_1195 375
260 3300048906 Ga0496103_0070375 Ga0496103_0070375_136_1263 375
261 3300048907 Ga0496104_0016022 Ga0496104_0016022_3492_4619 375
262 3300048907 Ga0496104_0219078 Ga0496104_0219078_496_1623 375
263 3300048909 Ga0496106_0083570 Ga0496106_0083570_347_1474 375
264 3300048911 Ga0496108_0005648 Ga0496108_0005648_7176_8303 375
265 3300048912 Ga0496109_0000830 Ga0496109_0000830_15629_16756 375
266 3300048913 Ga0496110_0005368 Ga0496110_0005368_7223_8350 375
267 3300048914 Ga0496111_0007608 Ga0496111_0007608_4155_5282 375
268 3300048916 Ga0496113_0013002 Ga0496113_0013002_585_1712 375
269 3300048917 Ga0496114_0001367 Ga0496114_0001367_10268_11395 375
270 3300053077 Ga0495601_0011354 Ga0495601_0011354_3990_5117 375
271 3300053085 Ga0495619_0043097 Ga0495619_0043097_651_1778 375

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01061

ABC2_membrane

ABC-2 type transporter

184

357

0.93

PF12698

ABC2_membrane_3

ABC-2 family transporter protein

24

385

0.87

PF12679

ABC2_membrane_2

ABC-2 family transporter protein

10

390

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
8wba-assembly1.cif.gz_A cryo-em structure of the abcg25 bound to chs 0.8075 233 372
8p8j-assembly1.cif.gz_B structure of 5d3-fab and nanobody(nb96)-bound abcg2 0.8042 228 366
8bi0-assembly1.cif.gz_A abcg2 turnover-2 state with tariquidar bound 0.7967 236 366
7oji-assembly1.cif.gz_A abcg2 topotecan turnover-2 state 0.7887 236 366
7r8d-assembly1.cif.gz_B the structure of human abcg1 e242q with cholesterol 0.781 230 366
ID Description Score Start End Superfamily
af_P37624_579_712_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8342 42 173 3.40.1710.10
af_P0AFP9_40_168_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8328 40 173 3.40.1710.10
af_P0AFP9_40_168_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.8147 40 173 3.40.1710.10
af_P37624_579_712_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7985 42 173 3.40.1710.10
af_P0AGH1_45_167_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7587 44 168 3.40.1710.10
ID Description Score Start End GO Terms
AF-A0A537JVQ4-F1-model_v4 ABC transporter permease 0.9696 268 367 GO:0005886
GO:0140359
AF-A0A2W5GTX5-F1-model_v4 ABC transporter permease 0.9387 257 374 GO:0005886
GO:0140359
AF-A0A2W5GTX5-F1-model_v4 ABC transporter permease 0.9311 257 374 GO:0005886
GO:0140359
AF-A0A359LQ09-F1-model_v4 Transport permease protein 0.9294 245 373 GO:0005886
GO:0140359
AF-A0A3M1XDD2-F1-model_v4 Transport permease protein 0.9074 238 373 GO:0043190
GO:0140359

Feature Viewer

pLDDT pTM Quality
70.24 0.57 Medium
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Predicted Structure (AlphaFold2)

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