F377767

General Info

Members Datasets Scaffolds Average Seq Length
271 195 269 408

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100029822|Ga0307416_1000298221
Length 435
Sequence VTHALDAHGDATGVGRVFREVYGQAVATLVRVFGDITLAEDAVQDAFVVASDRWRSDGIPPNPAGWIVTTARNRAVDELRRSARGRGLHEQVGVVATTSHGPGIEEWGEDGPVRDDQLRLIFTCCHPALRTEHHLPLTLRLLGGLSVDEVARSFLVSESAMAKRLVRAKYKIKAAKIPYRVPEEADLPERLRSVLSVLYLIYNTGLDGPERNSLRSEAIRLARALVELLPDEPEAAGLLALMLLSESRVPARTAEGALVLLRDQDRTKWDRAMIDEGHAIVRACIRRGRPGPFQLQAAIQAVHCHADSFEATDWPQIVALYDHLFAVMPTPVVALNRAIAIAEVEGPGAALATLDAIASDLDSYHLLHAARGTMLRRLGQRAAARSAFERAAHLAATDVDRRFLAQQIEELAEDGALMQHPPGGWTGSMNETRAP

Samples

Sample ID Description Type Environment
1 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
2 2928153084 Leifsonia sp. 563 Isolate Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
8 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
9 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
10 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
11 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
12 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
13 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
34 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
35 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
53 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
54 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
55 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
56 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
61 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
69 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
89 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
90 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
93 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
131 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
132 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
133 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
134 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
135 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
136 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
137 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
138 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
139 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
140 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
141 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
142 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
143 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
144 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
145 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
146 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
147 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
148 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
149 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
150 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
151 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
152 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
153 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
154 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
155 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
156 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
157 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
158 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
159 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
160 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
161 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
171 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
172 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
173 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
174 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
175 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
176 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
177 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
182 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
183 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
184 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
187 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
188 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
191 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
192 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
193 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
194 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
195 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.26
Metatranscriptomes 0
Isolates 0.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.7
Nodule 0
Rhizoplane 7.38
Rhizosphere 75.28
Stem 0
Stem Tuber 0
Unclassified 6.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000434 3300002705 Bacteria 25788
2 JGI25156J39149_1000740 3300002705 Bacteria 17229
3 JGI25157J39369_1000021 3300002741 Bacteria 163907
4 rootH2_10015560 3300003320 Bacteria 1707
5 rootH1_10071400 3300003323 Bacteria 2325
6 rootH1_10113559 3300003323 Bacteria 1694
7 JGI25407J50210_10005524 3300003373 Bacteria 3112
8 Ga0055539_1000651 3300003752 Bacteria 9229
9 Ga0055539_1000713 3300003752 Bacteria 8474
10 Ga0055533_1000033 3300003756 Bacteria 265716
11 Ga0055525_1001150 3300003759 Bacteria 6259
12 Ga0055527_1000012 3300003760 Bacteria 348744
13 Ga0055542_1000017 3300003762 Bacteria 348744
14 Ga0055529_1000023 3300003763 Bacteria 314383
15 Ga0070683_100024842 3300005329 Bacteria 5373
16 Ga0070690_100011170 3300005330 Bacteria 5247
17 Ga0070670_100070826 3300005331 Bacteria 2993
18 Ga0068869_100036188 3300005334 Bacteria 3504
19 Ga0070660_100082486 3300005339 Bacteria 2525
20 Ga0070661_100001264 3300005344 Bacteria 17763
21 Ga0070692_10002460 3300005345 Bacteria 7199
22 Ga0070659_100003260 3300005366 Bacteria 11550
23 Ga0070659_100031565 3300005366 Bacteria 4103
24 Ga0070703_10002779 3300005406 Bacteria 5015
25 Ga0070709_10000207 3300005434 Bacteria 38061
26 Ga0070709_10003097 3300005434 Bacteria 8932
27 Ga0070714_100026196 3300005435 Bacteria 4817
28 Ga0070714_100040595 3300005435 Bacteria 3922
29 Ga0070713_100000128 3300005436 Bacteria 50175
30 Ga0070713_100006031 3300005436 Bacteria 8349
31 Ga0070713_100216178 3300005436 Bacteria 1737
32 Ga0070710_10009840 3300005437 Bacteria 4685
33 Ga0070711_100061088 3300005439 Bacteria 2622
34 Ga0070705_100001361 3300005440 Bacteria 13031
35 Ga0070700_100057566 3300005441 Bacteria 2439
36 Ga0070694_100017687 3300005444 Bacteria 4506
37 Ga0070708_100042496 3300005445 Bacteria 3990
38 Ga0070708_100109530 3300005445 Bacteria 2537
39 Ga0070681_10001540 3300005458 Bacteria 20418
40 Ga0070706_100003727 3300005467 Bacteria 14899
41 Ga0070707_100005313 3300005468 Bacteria 12052
42 Ga0070707_100042280 3300005468 Bacteria 4363
43 Ga0070707_100182482 3300005468 Bacteria 2046
44 Ga0070707_100372714 3300005468 Bacteria 1387
45 Ga0070698_100004595 3300005471 Bacteria 15158
46 Ga0070699_100000406 3300005518 Bacteria 41682
47 Ga0070679_100017016 3300005530 Bacteria 7028
48 Ga0070684_100014438 3300005535 Bacteria 6400
49 Ga0068853_100099719 3300005539 Bacteria 2566
50 Ga0068855_100020119 3300005563 Bacteria 8015
51 Ga0070664_100132228 3300005564 Bacteria 2192
52 Ga0068857_100005460 3300005577 Bacteria 10843
53 Ga0068857_100035674 3300005577 Bacteria 4405
54 Ga0068854_100026481 3300005578 Bacteria 3986
55 Ga0068856_100031238 3300005614 Bacteria 5210
56 Ga0068861_100027794 3300005719 Bacteria 4124
57 Ga0068863_100012942 3300005841 Bacteria 8047
58 Ga0068860_100110436 3300005843 Bacteria 2628
59 Ga0081455_10001270 3300005937 Bacteria 31500
60 Ga0081455_10014085 3300005937 Bacteria 7860
61 Ga0081455_10047538 3300005937 Bacteria 3715
62 Ga0081538_10003079 3300005981 Bacteria 15857
63 Ga0081538_10003486 3300005981 Bacteria 14849
64 Ga0081538_10011779 3300005981 Bacteria 7058
65 Ga0081539_10087652 3300005985 Bacteria 1616
66 Ga0070717_10004275 3300006028 Bacteria 10296
67 Ga0075363_100000374 3300006048 Bacteria 13493
68 Ga0075364_10042307 3300006051 Bacteria 2959
69 Ga0070715_10000232 3300006163 Bacteria 13281
70 Ga0070716_100003171 3300006173 Bacteria 7702
71 Ga0070712_100063072 3300006175 Bacteria 2622
72 Ga0075366_10004361 3300006195 Bacteria 7588
73 Ga0075370_10003527 3300006353 Bacteria 7465
74 Ga0075370_10059910 3300006353 Bacteria 2168
75 Ga0075428_100010127 3300006844 Bacteria 10473
76 Ga0075428_100126536 3300006844 Bacteria 2781
77 Ga0075430_100001430 3300006846 Bacteria 19417
78 Ga0075431_100373832 3300006847 Bacteria 1430
79 Ga0075433_10022829 3300006852 Bacteria 5257
80 Ga0075433_10102465 3300006852 Bacteria 2535
81 Ga0075433_10232119 3300006852 Bacteria 1638
82 Ga0075434_100007768 3300006871 Bacteria 9931
83 Ga0075434_100027421 3300006871 Bacteria 5592
84 Ga0075434_100265399 3300006871 Bacteria 1736
85 Ga0068865_100045168 3300006881 Bacteria 3019
86 Ga0075435_100136467 3300007076 Bacteria 2055
87 Ga0105240_10142796 3300009093 Bacteria 2861
88 Ga0111539_10390296 3300009094 Bacteria 1621
89 Ga0105245_10328918 3300009098 Bacteria 1508
90 Ga0105247_10063460 3300009101 Bacteria 2293
91 Ga0114129_10021015 3300009147 Bacteria 9270
92 Ga0114129_10035196 3300009147 Bacteria 7075
93 Ga0105238_10024739 3300009551 Bacteria 6120
94 Ga0105249_10005061 3300009553 Bacteria 11356
95 Ga0105239_10017430 3300010375 Bacteria 7943
96 Ga0157370_10145291 3300013104 Bacteria 2209
97 Ga0157369_10078684 3300013105 Bacteria 3532
98 Ga0157369_10100897 3300013105 Bacteria 3077
99 Ga0157374_10407621 3300013296 Bacteria 1357
100 Ga0157378_10029575 3300013297 Bacteria 4838
101 Ga0163162_10199501 3300013306 Bacteria 2129
102 Ga0157375_10130638 3300013308 Bacteria 2630
103 Ga0157375_10552747 3300013308 Bacteria 1313
104 Ga0157380_10105132 3300014326 Bacteria 2359
105 Ga0157380_10171023 3300014326 Bacteria 1899
106 Ga0157379_10002049 3300014968 Bacteria 16741
107 Ga0157376_10306233 3300014969 Bacteria 1506
108 Ga0209674_100064 3300025226 Bacteria 265769
109 Ga0209672_100003 3300025228 Bacteria 1560476
110 Ga0209147_100904 3300025229 Bacteria 13413
111 Ga0209563_100099 3300025230 Bacteria 153336
112 Ga0209258_100699 3300025242 Bacteria 22932
113 Ga0209646_1000060 3300025246 Bacteria 256386
114 Ga0209026_1000049 3300025250 Bacteria 255273
115 Ga0209677_100175 3300025253 Bacteria 55052
116 Ga0209677_100782 3300025253 Bacteria 16014
117 Ga0209148_1000004 3300025254 Bacteria 1844481
118 Ga0209759_1000069 3300025256 Bacteria 182437
119 Ga0209455_1000022 3300025272 Bacteria 688910
120 Ga0207653_10005733 3300025885 Bacteria 3871
121 Ga0207692_10000149 3300025898 Bacteria 21946
122 Ga0207710_10025418 3300025900 Bacteria 2555
123 Ga0207685_10000112 3300025905 Bacteria 12439
124 Ga0207699_10000091 3300025906 Bacteria 67284
125 Ga0207699_10000638 3300025906 Bacteria 16989
126 Ga0207699_10073098 3300025906 Bacteria 2102
127 Ga0207643_10007531 3300025908 Bacteria 5844
128 Ga0207684_10000109 3300025910 Bacteria 154185
129 Ga0207684_10041942 3300025910 Bacteria 3879
130 Ga0207707_10022740 3300025912 Bacteria 5482
131 Ga0207695_10009579 3300025913 Bacteria 11969
132 Ga0207695_10037435 3300025913 Bacteria 5234
133 Ga0207671_10101476 3300025914 Bacteria 2180
134 Ga0207693_10025921 3300025915 Bacteria 4643
135 Ga0207693_10037389 3300025915 Bacteria 3827
136 Ga0207663_10000977 3300025916 Bacteria 13079
137 Ga0207660_10057064 3300025917 Bacteria 2796
138 Ga0207657_10119367 3300025919 Bacteria 2170
139 Ga0207657_10163094 3300025919 Bacteria 1809
140 Ga0207657_10194049 3300025919 Bacteria 1637
141 Ga0207649_10015706 3300025920 Bacteria 4255
142 Ga0207652_10047241 3300025921 Bacteria 3677
143 Ga0207646_10176741 3300025922 Bacteria 1928
144 Ga0207646_10269852 3300025922 Bacteria 1538
145 Ga0207694_10018298 3300025924 Bacteria 5296
146 Ga0207700_10000578 3300025928 Bacteria 21431
147 Ga0207700_10001244 3300025928 Bacteria 14524
148 Ga0207700_10002495 3300025928 Bacteria 10548
149 Ga0207700_10082753 3300025928 Bacteria 2510
150 Ga0207664_10002114 3300025929 Bacteria 13069
151 Ga0207664_10005068 3300025929 Bacteria 8974
152 Ga0207644_10056675 3300025931 Bacteria 2828
153 Ga0207690_10079528 3300025932 Bacteria 2285
154 Ga0207706_10084577 3300025933 Bacteria 2789
155 Ga0207665_10002079 3300025939 Bacteria 13515
156 Ga0207691_10002158 3300025940 Bacteria 19247
157 Ga0207689_10037423 3300025942 Bacteria 4024
158 Ga0207661_10033075 3300025944 Bacteria 4011
159 Ga0207679_10021928 3300025945 Bacteria 4340
160 Ga0207667_10007321 3300025949 Bacteria 13285
161 Ga0207712_10062534 3300025961 Bacteria 2647
162 Ga0207640_10021567 3300025981 Bacteria 3842
163 Ga0207702_10057274 3300026078 Bacteria 3312
164 Ga0207641_10019261 3300026088 Bacteria 5600
165 Ga0207641_10027132 3300026088 Bacteria 4729
166 Ga0207674_10057002 3300026116 Bacteria 3963
167 Ga0207674_10163850 3300026116 Bacteria 2178
168 Ga0207674_10171768 3300026116 Bacteria 2121
169 Ga0207698_10172325 3300026142 Bacteria 1907
170 Ga0268266_10032358 3300028379 Bacteria 4444
171 Ga0265337_1000293 3300028556 Bacteria 26906
172 Ga0265326_10004226 3300028558 Bacteria 4622
173 Ga0265338_10002773 3300028800 Bacteria 25645
174 Ga0307408_100031663 3300031548 Bacteria 3684
175 Ga0265313_10038866 3300031595 Bacteria 2366
176 Ga0307405_10024324 3300031731 Bacteria 3458
177 Ga0307406_10000178 3300031901 Bacteria 38000
178 Ga0307406_10027792 3300031901 Bacteria 3412
179 Ga0307407_10017295 3300031903 Bacteria 3614
180 Ga0307409_100000015 3300031995 Bacteria 61871
181 Ga0307416_100000138 3300032002 Bacteria 42771
182 Ga0307416_100029822 3300032002 Bacteria 4082
183 Ga0307416_100074441 3300032002 Bacteria 2837
184 Ga0307416_100077102 3300032002 Bacteria 2798
185 Ga0307411_10042412 3300032005 Bacteria 2903
186 Ga0307415_100001322 3300032126 Bacteria 11733
187 Ga0307415_100008933 3300032126 Bacteria 5585
188 Ga0307415_100077812 3300032126 Bacteria 2356
189 Ga0307415_100205232 3300032126 Bacteria 1567
190 Ga0373940_0000865 3300035088 Bacteria 5085
191 Ga0373960_0004557 3300035121 Bacteria 3182
192 Ga0373961_0019616 3300035241 Bacteria 1779
193 Ga0373931_0002090 3300035691 Bacteria 8794
194 Ga0373931_0004464 3300035691 Bacteria 6394
195 Ga0373947_0145022 3300035725 Bacteria 1526
196 Ga0395899_0018000 3300037312 Bacteria 5376
197 Ga0395899_0048747 3300037312 Bacteria 3151
198 Ga0395900_0014498 3300037418 Bacteria 8041
199 Ga0395900_0037629 3300037418 Bacteria 4988
200 Ga0395900_0187277 3300037418 Bacteria 2100
201 Ga0395900_0393038 3300037418 Bacteria 1352
202 Ga0395898_0008842 3300037466 Bacteria 10612
203 Ga0395898_0151816 3300037466 Bacteria 2216
204 Ga0395898_0197739 3300037466 Bacteria 1920
205 Ga0395905_0040332 3300037471 Bacteria 4380
206 Ga0395905_0041723 3300037471 Bacteria 4306
207 Ga0395905_0054782 3300037471 Bacteria 3732
208 Ga0395905_0091891 3300037471 Bacteria 2846
209 Ga0395901_0013503 3300038443 Bacteria 8305
210 Ga0395901_0101112 3300038443 Bacteria 3025
211 Ga0395901_0143878 3300038443 Bacteria 2506
212 Ga0395901_0217269 3300038443 Bacteria 1999
213 Ga0451577_0234165 3300042876 Bacteria 1661
214 Ga0466970_0101816 3300044765 Bacteria 1564
215 Ga0451576_0227352 3300045051 Bacteria 1948
216 Ga0495629_0031961 3300046459 Bacteria 3727
217 Ga0495583_0000046 3300046506 Bacteria 218059
218 Ga0495652_0132315 3300046529 Bacteria 1973
219 Ga0495625_0011393 3300046660 Bacteria 7257
220 Ga0495649_0000548 3300046694 Bacteria 31877
221 Ga0496100_0001784 3300048903 Bacteria 10731
222 Ga0496100_0007665 3300048903 Bacteria 5973
223 Ga0496101_0057759 3300048904 Bacteria 2807
224 Ga0496102_0000187 3300048905 Bacteria 84207
225 Ga0496103_0000126 3300048906 Bacteria 82291
226 Ga0496104_0002048 3300048907 Bacteria 17509
227 Ga0496104_0021164 3300048907 Bacteria 5968
228 Ga0496105_0001660 3300048908 Bacteria 15858
229 Ga0496108_0000332 3300048911 Bacteria 40080
230 Ga0496108_0004823 3300048911 Bacteria 10882
231 Ga0496108_0012804 3300048911 Bacteria 6831
232 Ga0496109_0001150 3300048912 Bacteria 22020
233 Ga0496109_0015574 3300048912 Bacteria 6631
234 Ga0496111_0001973 3300048914 Bacteria 12191
235 Ga0496112_0001345 3300048915 Bacteria 18702
236 Ga0496112_0004661 3300048915 Bacteria 11658
237 Ga0496113_0000441 3300048916 Bacteria 20177
238 Ga0496113_0047750 3300048916 Bacteria 3182
239 Ga0496114_0049619 3300048917 Bacteria 3492
240 Ga0496115_0001022 3300048918 Bacteria 20291
241 Ga0496116_0000306 3300048919 Bacteria 82349
242 Ga0496117_0000343 3300048920 Bacteria 82294
243 Ga0496117_0029193 3300048920 Bacteria 4255
244 Ga0496118_0000192 3300048921 Bacteria 107736
245 Ga0496119_0002798 3300048922 Bacteria 18702
246 Ga0496120_0003206 3300048923 Bacteria 15198
247 Ga0496124_0006532 3300048927 Bacteria 12685
248 Ga0496126_0000433 3300048929 Bacteria 84020
249 Ga0501034_0201500 3300049571 Bacteria 1948
250 Ga0501083_0014883 3300049744 Bacteria 5440
251 Ga0501045_0240104 3300049824 Bacteria 1349
252 nmdc:mga03n38_16556_c1 3300050490 Bacteria 2870
253 nmdc:mga03n38_71295_c1 3300050490 Bacteria 1609
254 nmdc:mga0yw44_60627_c1 3300050492 Bacteria 2318
255 nmdc:mga06z11_126175_c1 3300050494 Bacteria 1432
256 nmdc:mga07m45_37540_c1 3300050496 Bacteria 2702
257 nmdc:mga05p37_298484_c1 3300050507 Bacteria 1915
258 nmdc:mga0qj67_6744_c1 3300050509 Bacteria 8439
259 nmdc:mga06r32_37987_c1 3300050510 Bacteria 4558
260 nmdc:mga06r32_71409_c1 3300050510 Bacteria 3359
261 nmdc:mga0n895_23303_c1 3300050512 Bacteria 5816
262 nmdc:mga0n895_266155_c1 3300050512 Bacteria 1739
263 nmdc:mga0n895_288194_c1 3300050512 Bacteria 1665
264 nmdc:mga0rr50_119935_c1 3300050513 Bacteria 2092
265 nmdc:mga0a205_194360_c2 3300050515 Bacteria 1611
266 nmdc:mga0a205_56794_c1 3300050515 Bacteria 3779
267 Ga0500635_0000529 3300053080 Bacteria 10427
268 Ga0500636_0011558 3300053177 Bacteria 5169
269 Ga0500661_002440 3300055283 Bacteria 3501

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049824 Ga0501045_0240104 Ga0501045_0240104_11_1132 326
2 3300014968 Ga0157379_10002049 Ga0157379_100020493 336
3 3300048927 Ga0496124_0006532 Ga0496124_0006532_10502_11677 337
4 3300050496 nmdc:mga07m45_37540_c1 nmdc:mga07m45_37540_c1_46_1068 340
5 3300049571 Ga0501034_0201500 Ga0501034_0201500_479_1633 353
6 3300025900 Ga0207710_10025418 Ga0207710_100254183 356
7 3300053080 Ga0500635_0000529 Ga0500635_0000529_9163_10365 356
8 3300044765 Ga0466970_0101816 Ga0466970_0101816_225_1505 359
9 3300005841 Ga0068863_100012942 Ga0068863_1000129427 366
10 3300009101 Ga0105247_10063460 Ga0105247_100634603 366
11 3300026088 Ga0207641_10019261 Ga0207641_100192617 366
12 3300048903 Ga0496100_0001784 Ga0496100_0001784_8188_9363 366
13 3300048904 Ga0496101_0057759 Ga0496101_0057759_829_2004 366
14 3300048905 Ga0496102_0000187 Ga0496102_0000187_63791_64966 366
15 3300048906 Ga0496103_0000126 Ga0496103_0000126_17326_18501 366
16 3300048919 Ga0496116_0000306 Ga0496116_0000306_17387_18562 366
17 3300048920 Ga0496117_0000343 Ga0496117_0000343_17189_18364 366
18 3300048921 Ga0496118_0000192 Ga0496118_0000192_89260_90435 366
19 3300048922 Ga0496119_0002798 Ga0496119_0002798_289_1464 366
20 3300048923 Ga0496120_0003206 Ga0496120_0003206_9917_11092 366
21 3300048929 Ga0496126_0000433 Ga0496126_0000433_19055_20230 366
22 3300025915 Ga0207693_10037389 Ga0207693_100373894 367
23 3300025931 Ga0207644_10056675 Ga0207644_100566752 367
24 3300028379 Ga0268266_10032358 Ga0268266_100323585 367
25 3300005468 Ga0070707_100042280 Ga0070707_1000422803 370
26 3300025910 Ga0207684_10041942 Ga0207684_100419424 370
27 3300025922 Ga0207646_10176741 Ga0207646_101767412 370
28 3300037418 Ga0395900_0393038 Ga0395900_0393038_97_1323 370
29 3300038443 Ga0395901_0101112 Ga0395901_0101112_367_1599 370
30 3300005445 Ga0070708_100109530 Ga0070708_1001095302 373
31 3300005468 Ga0070707_100005313 Ga0070707_10000531314 373
32 3300038443 Ga0395901_0143878 Ga0395901_0143878_1027_2220 373
33 3300005406 Ga0070703_10002779 Ga0070703_100027793 374
34 3300005440 Ga0070705_100001361 Ga0070705_10000136111 374
35 3300005445 Ga0070708_100042496 Ga0070708_1000424961 374
36 3300005467 Ga0070706_100003727 Ga0070706_1000037272 374
37 3300005471 Ga0070698_100004595 Ga0070698_10000459516 374
38 3300005518 Ga0070699_100000406 Ga0070699_1000004068 374
39 3300006353 Ga0075370_10059910 Ga0075370_100599102 374
40 3300025885 Ga0207653_10005733 Ga0207653_100057332 374
41 3300025910 Ga0207684_10000109 Ga0207684_1000010916 374
42 3300025928 Ga0207700_10002495 Ga0207700_100024958 375
43 3300025929 Ga0207664_10005068 Ga0207664_100050682 375
44 3300003323 rootH1_10113559 rootH1_101135592 376
45 3300037471 Ga0395905_0091891 Ga0395905_0091891_742_1971 376
46 3300038443 Ga0395901_0217269 Ga0395901_0217269_508_1737 376
47 3300050509 nmdc:mga0qj67_6744_c1 nmdc:mga0qj67_6744_c1_1266_2504 376
48 3300003320 rootH2_10015560 rootH2_100155602 378
49 3300037312 Ga0395899_0018000 Ga0395899_0018000_3168_4394 378
50 3300037418 Ga0395900_0014498 Ga0395900_0014498_1233_2459 378
51 3300037466 Ga0395898_0008842 Ga0395898_0008842_7275_8501 378
52 3300037471 Ga0395905_0041723 Ga0395905_0041723_1573_2799 378
53 3300038443 Ga0395901_0013503 Ga0395901_0013503_5473_6699 378
54 3300046506 Ga0495583_0000046 Ga0495583_0000046_74004_75233 378
55 3300046694 Ga0495649_0000548 Ga0495649_0000548_22818_24047 378
56 3300050494 nmdc:mga06z11_126175_c1 nmdc:mga06z11_126175_c1_65_1369 378
57 3300005434 Ga0070709_10003097 Ga0070709_100030973 379
58 3300005435 Ga0070714_100040595 Ga0070714_1000405952 379
59 3300005436 Ga0070713_100006031 Ga0070713_1000060315 379
60 3300005437 Ga0070710_10009840 Ga0070710_100098406 379
61 3300005439 Ga0070711_100061088 Ga0070711_1000610884 379
62 3300005468 Ga0070707_100182482 Ga0070707_1001824822 379
63 3300005468 Ga0070707_100372714 Ga0070707_1003727141 379
64 3300005614 Ga0068856_100031238 Ga0068856_1000312384 379
65 3300006028 Ga0070717_10004275 Ga0070717_100042753 379
66 3300006163 Ga0070715_10000232 Ga0070715_1000023215 379
67 3300006173 Ga0070716_100003171 Ga0070716_1000031713 379
68 3300006175 Ga0070712_100063072 Ga0070712_1000630724 379
69 3300006852 Ga0075433_10232119 Ga0075433_102321192 379
70 3300006871 Ga0075434_100027421 Ga0075434_1000274212 379
71 3300009094 Ga0111539_10390296 Ga0111539_103902962 379
72 3300009147 Ga0114129_10021015 Ga0114129_100210155 379
73 3300013308 Ga0157375_10130638 Ga0157375_101306382 379
74 3300014969 Ga0157376_10306233 Ga0157376_103062331 379
75 3300025898 Ga0207692_10000149 Ga0207692_1000014912 379
76 3300025905 Ga0207685_10000112 Ga0207685_100001125 379
77 3300025906 Ga0207699_10000638 Ga0207699_1000063812 379
78 3300025915 Ga0207693_10025921 Ga0207693_100259216 379
79 3300025916 Ga0207663_10000977 Ga0207663_1000097717 379
80 3300025922 Ga0207646_10269852 Ga0207646_102698522 379
81 3300025928 Ga0207700_10001244 Ga0207700_1000124417 379
82 3300025929 Ga0207664_10002114 Ga0207664_100021145 379
83 3300025939 Ga0207665_10002079 Ga0207665_100020798 379
84 3300026078 Ga0207702_10057274 Ga0207702_100572744 379
85 3300031731 Ga0307405_10024324 Ga0307405_100243242 379
86 3300032002 Ga0307416_100074441 Ga0307416_1000744411 379
87 3300032005 Ga0307411_10042412 Ga0307411_100424124 379
88 3300032126 Ga0307415_100008933 Ga0307415_1000089334 379
89 3300035088 Ga0373940_0000865 Ga0373940_0000865_1516_2754 379
90 3300035121 Ga0373960_0004557 Ga0373960_0004557_1353_2591 379
91 3300035241 Ga0373961_0019616 Ga0373961_0019616_397_1635 379
92 3300035691 Ga0373931_0002090 Ga0373931_0002090_3654_4892 379
93 3300048903 Ga0496100_0007665 Ga0496100_0007665_2728_3966 379
94 3300048907 Ga0496104_0002048 Ga0496104_0002048_4535_5773 379
95 3300048908 Ga0496105_0001660 Ga0496105_0001660_8891_10129 379
96 3300048911 Ga0496108_0012804 Ga0496108_0012804_767_2005 379
97 3300048912 Ga0496109_0015574 Ga0496109_0015574_4554_5792 379
98 3300048915 Ga0496112_0004661 Ga0496112_0004661_7554_8792 379
99 3300048916 Ga0496113_0047750 Ga0496113_0047750_1180_2418 379
100 3300048917 Ga0496114_0049619 Ga0496114_0049619_120_1358 379
101 3300048918 Ga0496115_0001022 Ga0496115_0001022_5261_6499 379
102 3300050512 nmdc:mga0n895_288194_c1 nmdc:mga0n895_288194_c1_371_1609 379
103 3300005937 Ga0081455_10001270 Ga0081455_1000127023 380
104 3300005937 Ga0081455_10014085 Ga0081455_100140856 380
105 3300005985 Ga0081539_10087652 Ga0081539_100876521 380
106 3300006844 Ga0075428_100126536 Ga0075428_1001265364 380
107 3300009147 Ga0114129_10035196 Ga0114129_100351964 380
108 3300013104 Ga0157370_10145291 Ga0157370_101452912 380
109 3300013105 Ga0157369_10100897 Ga0157369_101008972 380
110 3300013308 Ga0157375_10552747 Ga0157375_105527471 380
111 3300028556 Ga0265337_1000293 Ga0265337_100029322 380
112 3300028558 Ga0265326_10004226 Ga0265326_100042263 380
113 3300028800 Ga0265338_10002773 Ga0265338_1000277324 380
114 3300031595 Ga0265313_10038866 Ga0265313_100388662 380
115 3300037418 Ga0395900_0037629 Ga0395900_0037629_2818_4047 380
116 3300037466 Ga0395898_0197739 Ga0395898_0197739_618_1847 380
117 3300037471 Ga0395905_0040332 Ga0395905_0040332_2228_3457 380
118 3300005436 Ga0070713_100216178 Ga0070713_1002161782 381
119 3300005981 Ga0081538_10003079 Ga0081538_1000307919 381
120 3300006852 Ga0075433_10022829 Ga0075433_100228294 381
121 3300006852 Ga0075433_10102465 Ga0075433_101024652 381
122 3300006871 Ga0075434_100007768 Ga0075434_1000077683 381
123 3300007076 Ga0075435_100136467 Ga0075435_1001364672 381
124 3300009098 Ga0105245_10328918 Ga0105245_103289182 381
125 3300025928 Ga0207700_10082753 Ga0207700_100827533 381
126 3300046529 Ga0495652_0132315 Ga0495652_0132315_191_1435 381
127 3300050507 nmdc:mga05p37_298484_c1 nmdc:mga05p37_298484_c1_133_1428 381
128 3300050510 nmdc:mga06r32_71409_c1 nmdc:mga06r32_71409_c1_830_2059 381
129 3300050512 nmdc:mga0n895_23303_c1 nmdc:mga0n895_23303_c1_3097_4341 381
130 3300050513 nmdc:mga0rr50_119935_c1 nmdc:mga0rr50_119935_c1_566_1810 381
131 3300050515 nmdc:mga0a205_56794_c1 nmdc:mga0a205_56794_c1_1623_2867 381
132 3300005434 Ga0070709_10000207 Ga0070709_1000020711 382
133 3300005435 Ga0070714_100026196 Ga0070714_1000261962 382
134 3300005436 Ga0070713_100000128 Ga0070713_10000012810 382
135 3300006844 Ga0075428_100010127 Ga0075428_1000101276 382
136 3300013297 Ga0157378_10029575 Ga0157378_100295755 382
137 3300025906 Ga0207699_10000091 Ga0207699_1000009111 382
138 3300025928 Ga0207700_10000578 Ga0207700_1000057816 382
139 3300032002 Ga0307416_100077102 Ga0307416_1000771023 382
140 3300048920 Ga0496117_0029193 Ga0496117_0029193_670_1941 382
141 3300050492 nmdc:mga0yw44_60627_c1 nmdc:mga0yw44_60627_c1_542_1837 382
142 iso_pu_bacteria 2919055335 2919057620 382
143 iso_pu_bacteria 2928153084 2928155814 382
144 3300005981 Ga0081538_10003486 Ga0081538_1000348613 383
145 3300006871 Ga0075434_100265399 Ga0075434_1002653992 383
146 3300031548 Ga0307408_100031663 Ga0307408_1000316633 383
147 3300031901 Ga0307406_10027792 Ga0307406_100277922 383
148 3300049744 Ga0501083_0014883 Ga0501083_0014883_903_2132 383
149 3300050512 nmdc:mga0n895_266155_c1 nmdc:mga0n895_266155_c1_233_1474 383
150 3300050515 nmdc:mga0a205_194360_c2 nmdc:mga0a205_194360_c2_256_1497 383
151 3300003373 JGI25407J50210_10005524 JGI25407J50210_100055243 384
152 3300005329 Ga0070683_100024842 Ga0070683_1000248425 384
153 3300005331 Ga0070670_100070826 Ga0070670_1000708263 384
154 3300005344 Ga0070661_100001264 Ga0070661_1000012644 384
155 3300005366 Ga0070659_100003260 Ga0070659_1000032606 384
156 3300005458 Ga0070681_10001540 Ga0070681_1000154010 384
157 3300005530 Ga0070679_100017016 Ga0070679_1000170165 384
158 3300005535 Ga0070684_100014438 Ga0070684_1000144383 384
159 3300005564 Ga0070664_100132228 Ga0070664_1001322281 384
160 3300005577 Ga0068857_100005460 Ga0068857_1000054607 384
161 3300005981 Ga0081538_10011779 Ga0081538_100117793 384
162 3300006048 Ga0075363_100000374 Ga0075363_1000003748 384
163 3300006051 Ga0075364_10042307 Ga0075364_100423073 384
164 3300013105 Ga0157369_10078684 Ga0157369_100786842 384
165 3300025912 Ga0207707_10022740 Ga0207707_100227404 384
166 3300025917 Ga0207660_10057064 Ga0207660_100570642 384
167 3300025919 Ga0207657_10119367 Ga0207657_101193671 384
168 3300025920 Ga0207649_10015706 Ga0207649_100157064 384
169 3300025921 Ga0207652_10047241 Ga0207652_100472411 384
170 3300025932 Ga0207690_10079528 Ga0207690_100795282 384
171 3300025944 Ga0207661_10033075 Ga0207661_100330754 384
172 3300025945 Ga0207679_10021928 Ga0207679_100219284 384
173 3300026088 Ga0207641_10027132 Ga0207641_100271324 384
174 3300031901 Ga0307406_10000178 Ga0307406_1000017826 384
175 3300031903 Ga0307407_10017295 Ga0307407_100172952 384
176 3300031995 Ga0307409_100000015 Ga0307409_10000001554 384
177 3300032002 Ga0307416_100000138 Ga0307416_10000013832 384
178 3300032002 Ga0307416_100029822 Ga0307416_1000298221 384
179 3300032126 Ga0307415_100001322 Ga0307415_1000013229 384
180 3300032126 Ga0307415_100077812 Ga0307415_1000778121 384
181 3300032126 Ga0307415_100205232 Ga0307415_1002052321 384
182 3300035691 Ga0373931_0004464 Ga0373931_0004464_3848_5086 384
183 3300037312 Ga0395899_0048747 Ga0395899_0048747_347_1651 384
184 3300037418 Ga0395900_0187277 Ga0395900_0187277_715_2019 384
185 3300037466 Ga0395898_0151816 Ga0395898_0151816_190_1494 384
186 3300037471 Ga0395905_0054782 Ga0395905_0054782_2254_3558 384
187 3300048907 Ga0496104_0021164 Ga0496104_0021164_2216_3454 384
188 3300048911 Ga0496108_0000332 Ga0496108_0000332_13698_14936 384
189 3300048911 Ga0496108_0004823 Ga0496108_0004823_9517_10755 384
190 3300048912 Ga0496109_0001150 Ga0496109_0001150_11711_12949 384
191 3300048914 Ga0496111_0001973 Ga0496111_0001973_7640_8878 384
192 3300048915 Ga0496112_0001345 Ga0496112_0001345_13214_14452 384
193 3300048916 Ga0496113_0000441 Ga0496113_0000441_13696_14934 384
194 3300050490 nmdc:mga03n38_16556_c1 nmdc:mga03n38_16556_c1_362_1612 384
195 3300050490 nmdc:mga03n38_71295_c1 nmdc:mga03n38_71295_c1_299_1549 384
196 3300003760 Ga0055527_1000012 Ga0055527_1000012150 385
197 3300003762 Ga0055542_1000017 Ga0055542_1000017150 385
198 3300003763 Ga0055529_1000023 Ga0055529_1000023117 385
199 3300005937 Ga0081455_10047538 Ga0081455_100475382 385
200 3300006846 Ga0075430_100001430 Ga0075430_10000143011 385
201 3300006847 Ga0075431_100373832 Ga0075431_1003738322 385
202 3300025228 Ga0209672_100003 Ga0209672_100003196 385
203 3300025229 Ga0209147_100904 Ga0209147_1009043 385
204 3300025254 Ga0209148_1000004 Ga0209148_1000004491 385
205 3300025272 Ga0209455_1000022 Ga0209455_1000022493 385
206 3300035725 Ga0373947_0145022 Ga0373947_0145022_141_1376 385
207 3300042876 Ga0451577_0234165 Ga0451577_0234165_152_1387 385
208 3300045051 Ga0451576_0227352 Ga0451576_0227352_584_1846 385
209 3300046459 Ga0495629_0031961 Ga0495629_0031961_1709_2944 385
210 3300050510 nmdc:mga06r32_37987_c1 nmdc:mga06r32_37987_c1_71_1330 385
211 3300005345 Ga0070692_10002460 Ga0070692_100024604 386
212 3300005366 Ga0070659_100031565 Ga0070659_1000315651 386
213 3300005441 Ga0070700_100057566 Ga0070700_1000575662 386
214 3300005444 Ga0070694_100017687 Ga0070694_1000176871 386
215 3300005539 Ga0068853_100099719 Ga0068853_1000997191 386
216 3300005843 Ga0068860_100110436 Ga0068860_1001104361 386
217 3300006881 Ga0068865_100045168 Ga0068865_1000451683 386
218 3300009553 Ga0105249_10005061 Ga0105249_1000506110 386
219 3300013296 Ga0157374_10407621 Ga0157374_104076211 386
220 3300013306 Ga0163162_10199501 Ga0163162_101995012 386
221 3300014326 Ga0157380_10105132 Ga0157380_101051322 386
222 3300014326 Ga0157380_10171023 Ga0157380_101710231 386
223 3300025906 Ga0207699_10073098 Ga0207699_100730982 386
224 3300025908 Ga0207643_10007531 Ga0207643_100075312 386
225 3300025919 Ga0207657_10163094 Ga0207657_101630941 386
226 3300025933 Ga0207706_10084577 Ga0207706_100845773 386
227 3300025940 Ga0207691_10002158 Ga0207691_1000215815 386
228 3300025961 Ga0207712_10062534 Ga0207712_100625342 386
229 3300026116 Ga0207674_10171768 Ga0207674_101717681 386
230 3300005563 Ga0068855_100020119 Ga0068855_1000201193 391
231 3300006353 Ga0075370_10003527 Ga0075370_100035276 391
232 3300025949 Ga0207667_10007321 Ga0207667_1000732110 391
233 3300009093 Ga0105240_10142796 Ga0105240_101427962 393
234 3300025913 Ga0207695_10009579 Ga0207695_1000957913 393
235 3300053177 Ga0500636_0011558 Ga0500636_0011558_3352_4575 393
236 3300003323 rootH1_10071400 rootH1_100714003 394
237 3300025913 Ga0207695_10037435 Ga0207695_100374353 394
238 3300026116 Ga0207674_10163850 Ga0207674_101638502 394
239 3300046660 Ga0495625_0011393 Ga0495625_0011393_4243_5472 394
240 3300055283 Ga0500661_002440 Ga0500661_002440_1082_2305 394
241 3300003752 Ga0055539_1000651 Ga0055539_100065111 396
242 3300003756 Ga0055533_1000033 Ga0055533_1000033140 396
243 3300003759 Ga0055525_1001150 Ga0055525_10011503 396
244 3300006195 Ga0075366_10004361 Ga0075366_100043618 396
245 3300010375 Ga0105239_10017430 Ga0105239_100174303 396
246 3300025226 Ga0209674_100064 Ga0209674_100064109 396
247 3300025230 Ga0209563_100099 Ga0209563_100099109 396
248 3300025242 Ga0209258_100699 Ga0209258_10069915 396
249 3300025253 Ga0209677_100175 Ga0209677_10017528 396
250 3300002705 JGI25156J39149_1000434 JGI25156J39149_10004342 397
251 3300002705 JGI25156J39149_1000740 JGI25156J39149_100074020 397
252 3300002741 JGI25157J39369_1000021 JGI25157J39369_100002123 397
253 3300003752 Ga0055539_1000713 Ga0055539_10007133 397
254 3300005330 Ga0070690_100011170 Ga0070690_1000111703 397
255 3300005334 Ga0068869_100036188 Ga0068869_1000361884 397
256 3300005339 Ga0070660_100082486 Ga0070660_1000824863 397
257 3300005577 Ga0068857_100035674 Ga0068857_1000356745 397
258 3300005578 Ga0068854_100026481 Ga0068854_1000264814 397
259 3300005719 Ga0068861_100027794 Ga0068861_1000277944 397
260 3300009551 Ga0105238_10024739 Ga0105238_100247394 397
261 3300025246 Ga0209646_1000060 Ga0209646_1000060135 397
262 3300025250 Ga0209026_1000049 Ga0209026_1000049133 397
263 3300025253 Ga0209677_100782 Ga0209677_1007823 397
264 3300025256 Ga0209759_1000069 Ga0209759_1000069133 397
265 3300025914 Ga0207671_10101476 Ga0207671_101014762 397
266 3300025919 Ga0207657_10194049 Ga0207657_101940492 397
267 3300025924 Ga0207694_10018298 Ga0207694_100182986 397
268 3300025942 Ga0207689_10037423 Ga0207689_100374235 397
269 3300025981 Ga0207640_10021567 Ga0207640_100215672 397
270 3300026116 Ga0207674_10057002 Ga0207674_100570023 397
271 3300026142 Ga0207698_10172325 Ga0207698_101723251 397

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20239

DUF6596

Family of unknown function (DUF6596)

190

285

0.95

PF04542

Sigma70_r2

Sigma-70 region 2

17

85

0.9

PF08281

Sigma70_r4_2

Sigma-70, region 4

119

172

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cgv-assembly4.cif.gz_D first tpr of spaghetti (rpap3) bound to hsp90 peptide srmeevd 0.8257 268 392
8fwd-assembly1.cif.gz_L fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock 0.8227 307 392
5fzq-assembly1.cif.gz_B designed tpr protein m4n 0.8198 266 372
6zbk-assembly1.cif.gz_A crystal structure of the human complex between rpap3 and trbp 0.8196 271 392
8fwd-assembly1.cif.gz_2 fast and versatile sequence- independent protein docking for nanomaterials design using rpxdock 0.8162 307 392
ID Description Score Start End Superfamily
af_Q8IUR5_683_793_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8797 271 383 1.25.40.10
af_Q4E5D0_2_130_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8533 268 394 1.25.40.10
af_A4I5V1_127_276_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8514 266 393 1.25.40.10
af_Q58208_135_214_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8496 308 390 1.25.40.10
af_G3V9Y3_12_180_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8476 265 392 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A235B057-F1-model_v4 deleted 0.97 235 395
AF-A0A2V5YRP4-F1-model_v4 RNA polymerase subunit sigma-70 0.9686 190 388
AF-A0A235B057-F1-model_v4 deleted 0.9641 235 395
AF-A0A3S1MXC8-F1-model_v4 RNA polymerase subunit sigma-70 0.9583 197 391
AF-A0A3S2CG37-F1-model_v4 RNA polymerase subunit sigma-70 0.9573 245 390

Feature Viewer

pLDDT pTM Quality
87.4 0.86 High
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Predicted Structure (AlphaFold2)

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