F378593

General Info

Members Datasets Scaffolds Average Seq Length
272 184 544 287

Family's Representative Sequence

Representative Sequence 3300046522|Ga0495643_0000023|Ga0495643_0000023_177334_178197
Length 287
Sequence MTDWTPFTARASDWFRSLRDAICAEFEAIEHEAGSDATFGYTPWQRAALEGEDAETGGGTRGLMKGRVFEKVGVNISTVSGGLAKDFAATINGASAENNAFSATGISLVAHMANPHVPAVHMNTRFLTTTKAWFGGGADLNPPIPYVEDTAEFHAEFKAACDAHGEGYYDRYKAWADEYFYIPHRKVHRGVGGIFYDHLECPDEAAWEANFAFTRAVGEAFLAVFPRLVRRRLGMAYTPADKAIQLEWRGRYAEFNLVYDRGTLFGLKTGGNIDAILMSLPPEATWS

Samples

Sample ID Description Type Environment
1 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
67 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
68 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
84 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
85 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
86 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
87 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
88 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
89 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
90 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
93 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
94 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
95 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
96 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
97 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
98 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
99 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
100 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
101 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
102 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
103 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
104 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
105 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
106 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
107 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
108 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
109 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
122 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
125 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
131 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
134 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
135 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
136 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
137 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
138 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
139 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
140 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
141 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
142 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
143 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
144 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
145 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
146 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
147 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
148 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
149 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
150 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
153 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
154 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
155 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
156 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
157 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
158 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
159 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
160 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
161 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
162 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
163 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
164 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
165 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
166 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
167 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
168 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
169 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
170 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
171 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
172 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
173 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
174 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
175 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
176 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
177 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
178 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
179 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
180 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
181 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
182 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
183 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
184 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.54
Metatranscriptomes 0
Isolates 8.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.49
Nodule 0.37
Rhizoplane 4.78
Rhizosphere 63.6
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495643_0000023 3300046522 Bacteria 288590
2 JGI24751J29686_10000556 3300002459 Bacteria 10203
3 Ga0065704_10082403 3300005289 Bacteria 3605
4 Ga0065707_10110065 3300005295 Bacteria 2445
5 Ga0070658_10003004 3300005327 Bacteria 13953
6 Ga0070658_10077766 3300005327 Bacteria 2722
7 Ga0070670_100039353 3300005331 Bacteria 4066
8 Ga0070670_100334056 3300005331 Bacteria 1329
9 Ga0070666_10035401 3300005335 Bacteria 3311
10 Ga0070660_100016179 3300005339 Bacteria 5408
11 Ga0070668_100027569 3300005347 Bacteria 4313
12 Ga0070668_100049556 3300005347 Bacteria 3232
13 Ga0070669_100000840 3300005353 Bacteria 22295
14 Ga0070669_100003835 3300005353 Bacteria 10858
15 Ga0070669_100195748 3300005353 Bacteria 1588
16 Ga0070671_100001008 3300005355 Bacteria 20710
17 Ga0070671_100009463 3300005355 Bacteria 7822
18 Ga0070671_100046159 3300005355 Bacteria 3622
19 Ga0070671_100164653 3300005355 Bacteria 1875
20 Ga0070667_100000167 3300005367 Bacteria 82055
21 Ga0070667_100010173 3300005367 Bacteria 7776
22 Ga0070667_100017892 3300005367 Bacteria 5874
23 Ga0070667_100024773 3300005367 Bacteria 4985
24 Ga0070679_100052119 3300005530 Bacteria 4077
25 Ga0070679_100130425 3300005530 Bacteria 2495
26 Ga0070679_100418338 3300005530 Bacteria 1286
27 Ga0070665_100001223 3300005548 Bacteria 31260
28 Ga0070665_100214997 3300005548 Bacteria 1923
29 Ga0068855_100032364 3300005563 Bacteria 6244
30 Ga0070664_100201873 3300005564 Bacteria 1774
31 Ga0068857_100077620 3300005577 Bacteria 2964
32 Ga0068852_100003627 3300005616 Bacteria 10807
33 Ga0068859_100301104 3300005617 Bacteria 1697
34 Ga0068864_100003730 3300005618 Bacteria 12575
35 Ga0068863_100000103 3300005841 Bacteria 91380
36 Ga0068863_100004317 3300005841 Bacteria 14009
37 Ga0068863_100035411 3300005841 Bacteria 4755
38 Ga0068860_100000093 3300005843 Bacteria 150034
39 Ga0068860_100009143 3300005843 Bacteria 9856
40 Ga0068860_100051258 3300005843 Bacteria 3927
41 Ga0068862_100002133 3300005844 Bacteria 17807
42 Ga0068862_100002732 3300005844 Bacteria 15487
43 Ga0068862_100012308 3300005844 Bacteria 7075
44 Ga0075363_100055731 3300006048 Bacteria 2118
45 Ga0075364_10006299 3300006051 Bacteria 6968
46 Ga0075364_10020587 3300006051 Bacteria 4150
47 Ga0075362_10000012 3300006177 Bacteria 106760
48 Ga0075367_10017083 3300006178 Bacteria 3976
49 Ga0075369_10006498 3300006186 Bacteria 4421
50 Ga0075369_10013699 3300006186 Bacteria 3226
51 Ga0075366_10003553 3300006195 Bacteria 8243
52 Ga0075366_10008389 3300006195 Bacteria 5742
53 Ga0075366_10040866 3300006195 Bacteria 2744
54 Ga0075366_10081581 3300006195 Bacteria 1932
55 Ga0075370_10000002 3300006353 Bacteria 142637
56 Ga0075370_10048062 3300006353 Bacteria 2417
57 Ga0075370_10060366 3300006353 Bacteria 2160
58 Ga0097620_100301085 3300006931 Bacteria 1697
59 Ga0105251_10001541 3300009011 Bacteria 19789
60 Ga0105240_10005914 3300009093 Bacteria 18120
61 Ga0105247_10018519 3300009101 Bacteria 4177
62 Ga0105248_10139035 3300009177 Bacteria 2740
63 Ga0105248_10299153 3300009177 Bacteria 1812
64 Ga0105248_10426991 3300009177 Bacteria 1493
65 Ga0105238_10118207 3300009551 Bacteria 2631
66 Ga0157369_10229580 3300013105 Bacteria 1941
67 Ga0163161_10001996 3300017792 Bacteria 14773
68 Ga0209050_1001280 3300025298 Bacteria 28715
69 Ga0207697_10061813 3300025315 Bacteria 1559
70 Ga0207713_1000412 3300025735 Bacteria 45595
71 Ga0207710_10133854 3300025900 Bacteria 1192
72 Ga0207647_10001491 3300025904 Bacteria 17973
73 Ga0207705_10000007 3300025909 Bacteria 597387
74 Ga0207705_10005383 3300025909 Bacteria 9573
75 Ga0207705_10064123 3300025909 Bacteria 2655
76 Ga0207657_10025636 3300025919 Bacteria 5432
77 Ga0207649_10195986 3300025920 Bacteria 1424
78 Ga0207652_10007674 3300025921 Bacteria 8675
79 Ga0207652_10038671 3300025921 Bacteria 4046
80 Ga0207652_10145338 3300025921 Bacteria 2122
81 Ga0207681_10000499 3300025923 Bacteria 27301
82 Ga0207681_10001428 3300025923 Bacteria 15392
83 Ga0207681_10087598 3300025923 Bacteria 2216
84 Ga0207694_10074666 3300025924 Bacteria 2654
85 Ga0207644_10000008 3300025931 Bacteria 354219
86 Ga0207644_10002395 3300025931 Bacteria 12087
87 Ga0207670_10269789 3300025936 Bacteria 1322
88 Ga0207711_10003070 3300025941 Bacteria 14583
89 Ga0207711_10263667 3300025941 Bacteria 1584
90 Ga0207679_10426789 3300025945 Bacteria 1171
91 Ga0207667_10056033 3300025949 Bacteria 4142
92 Ga0207667_10231884 3300025949 Bacteria 1890
93 Ga0207712_10218091 3300025961 Bacteria 1523
94 Ga0207668_10040910 3300025972 Bacteria 3130
95 Ga0207668_10044055 3300025972 Bacteria 3033
96 Ga0207668_10194528 3300025972 Bacteria 1610
97 Ga0207640_10009604 3300025981 Bacteria 5423
98 Ga0207640_10012573 3300025981 Bacteria 4826
99 Ga0207658_10000742 3300025986 Bacteria 28124
100 Ga0207658_10011396 3300025986 Bacteria 6051
101 Ga0207658_10158920 3300025986 Bacteria 1850
102 Ga0207703_10558795 3300026035 Bacteria 1079
103 Ga0207678_10090747 3300026067 Bacteria 2611
104 Ga0207678_10111033 3300026067 Bacteria 2339
105 Ga0207678_10122993 3300026067 Bacteria 2214
106 Ga0207702_10005079 3300026078 Bacteria 11562
107 Ga0207641_10000113 3300026088 Bacteria 119188
108 Ga0207676_10001272 3300026095 Bacteria 18754
109 Ga0207676_10027966 3300026095 Bacteria 4207
110 Ga0207676_10138540 3300026095 Bacteria 2080
111 Ga0207674_10203682 3300026116 Bacteria 1928
112 Ga0207698_10006223 3300026142 Bacteria 7430
113 Ga0207698_10096108 3300026142 Bacteria 2441
114 Ga0207698_10107222 3300026142 Bacteria 2332
115 Ga0209281_1008639 3300027111 Bacteria 2455
116 Ga0209813_10000015 3300027866 Bacteria 83882
117 Ga0209974_10011414 3300027876 Bacteria 2983
118 Ga0209974_10034173 3300027876 Bacteria 1688
119 Ga0268266_10001277 3300028379 Bacteria 30750
120 Ga0268266_10005960 3300028379 Bacteria 11269
121 Ga0268265_10001942 3300028380 Bacteria 16408
122 Ga0268265_10043410 3300028380 Bacteria 3342
123 Ga0268265_10220405 3300028380 Bacteria 1659
124 Ga0268264_10000067 3300028381 Bacteria 284445
125 Ga0268264_10005066 3300028381 Bacteria 11157
126 Ga0268264_10099379 3300028381 Bacteria 2525
127 Ga0265331_10048916 3300031250 Bacteria 2032
128 Ga0265327_10026690 3300031251 Bacteria 3340
129 Ga0307408_100212311 3300031548 Bacteria 1574
130 Ga0307508_10003912 3300031616 Bacteria 14785
131 Ga0307405_10000984 3300031731 Bacteria 11444
132 Ga0307405_10017416 3300031731 Bacteria 3943
133 Ga0307405_10394588 3300031731 Bacteria 1081
134 Ga0307406_10031014 3300031901 Bacteria 3252
135 Ga0307407_10057380 3300031903 Bacteria 2258
136 Ga0307416_100224816 3300032002 Bacteria 1804
137 Ga0307416_100292933 3300032002 Bacteria 1612
138 Ga0307414_10028250 3300032004 Bacteria 3636
139 Ga0307411_10016756 3300032005 Bacteria 4155
140 Ga0307411_10124744 3300032005 Bacteria 1870
141 Ga0307415_100273995 3300032126 Bacteria 1384
142 Ga0316583_10007898 3300032133 Bacteria 3835
143 Ga0373948_0012221 3300034817 Bacteria 1530
144 Ga0373960_0052611 3300035121 Bacteria 1213
145 Ga0373931_0005630 3300035691 Bacteria 5812
146 Ga0316584_0021113 3300036712 Bacteria 4728
147 Ga0451833_1305553 3300041491 Bacteria 1601
148 Ga0439462_0000651 3300042015 Bacteria 7006
149 Ga0495627_000090 3300046453 Bacteria 109622
150 Ga0495650_0003423 3300046471 Bacteria 11588
151 Ga0495596_0000601 3300046500 Bacteria 22617
152 Ga0495607_0010121 3300046501 Bacteria 6347
153 Ga0495583_0141215 3300046506 Bacteria 1002
154 Ga0495606_0018840 3300046507 Bacteria 5162
155 Ga0495606_0023302 3300046507 Bacteria 4490
156 Ga0495610_0000015 3300046512 Bacteria 391489
157 Ga0495610_0000300 3300046512 Bacteria 52078
158 Ga0495610_0002353 3300046512 Bacteria 15973
159 Ga0495610_0091730 3300046512 Bacteria 1376
160 Ga0495610_0141124 3300046512 Bacteria 1037
161 Ga0495620_0014571 3300046515 Bacteria 3992
162 Ga0495632_0001260 3300046519 Bacteria 21471
163 Ga0495643_0008194 3300046522 Bacteria 6643
164 Ga0495643_0033511 3300046522 Bacteria 2841
165 Ga0495648_0001780 3300046524 Bacteria 20723
166 Ga0495654_0069226 3300046530 Bacteria 1676
167 Ga0495609_0013862 3300046538 Bacteria 3800
168 Ga0495621_0010856 3300046539 Bacteria 2802
169 Ga0495597_0016034 3300046542 Bacteria 3542
170 Ga0495668_0037965 3300046616 Bacteria 2693
171 Ga0495625_0013087 3300046660 Bacteria 6683
172 Ga0495625_0016968 3300046660 Bacteria 5712
173 Ga0495625_0049541 3300046660 Bacteria 3019
174 Ga0495671_0031996 3300046692 Bacteria 2687
175 Ga0495681_0000048 3300047470 Bacteria 110216
176 Ga0495626_0000301 3300048091 Bacteria 52582
177 Ga0496101_0088806 3300048904 Bacteria 2296
178 Ga0496104_0008468 3300048907 Bacteria 9145
179 Ga0496105_0003939 3300048908 Bacteria 11099
180 Ga0496106_0004232 3300048909 Bacteria 10682
181 Ga0496107_0003865 3300048910 Bacteria 10066
182 Ga0496108_0251513 3300048911 Bacteria 1537
183 Ga0496109_0305990 3300048912 Bacteria 1499
184 Ga0496109_0515599 3300048912 Bacteria 1128
185 Ga0496110_0032335 3300048913 Bacteria 4517
186 Ga0496110_0074035 3300048913 Bacteria 3023
187 Ga0496113_0017322 3300048916 Bacteria 4999
188 Ga0496113_0029486 3300048916 Bacteria 3963
189 Ga0496114_0090810 3300048917 Bacteria 2593
190 Ga0496116_0000284 3300048919 Bacteria 86342
191 Ga0496117_0039132 3300048920 Bacteria 3504
192 Ga0496117_0171675 3300048920 Bacteria 1258
193 Ga0496118_0002469 3300048921 Bacteria 24817
194 Ga0496118_0019451 3300048921 Bacteria 6069
195 Ga0496118_0032157 3300048921 Bacteria 4331
196 Ga0496121_0000070 3300048924 Bacteria 249187
197 Ga0496121_0000196 3300048924 Bacteria 135812
198 Ga0496121_0002183 3300048924 Bacteria 30626
199 Ga0496121_0007757 3300048924 Bacteria 12858
200 Ga0496122_0017082 3300048925 Bacteria 6809
201 Ga0496123_0002479 3300048926 Bacteria 22782
202 Ga0496124_0002571 3300048927 Bacteria 23520
203 Ga0496124_0046903 3300048927 Bacteria 3698
204 Ga0496125_0010804 3300048928 Bacteria 9193
205 Ga0496126_0005719 3300048929 Bacteria 14086
206 Ga0496126_0015023 3300048929 Bacteria 7805
207 Ga0501034_0144944 3300049571 Bacteria 2353
208 Ga0501039_0354921 3300049575 Bacteria 1152
209 Ga0501223_000026 3300049663 Bacteria 58071
210 Ga0501249_003354 3300049679 Bacteria 3212
211 Ga0501044_0000101 3300049823 Bacteria 106650
212 Ga0501044_0480504 3300049823 Bacteria 1146
213 nmdc:mga03683_35_c1 3300050489 Bacteria 65966
214 nmdc:mga03n38_254649_c1 3300050490 Bacteria 928
215 nmdc:mga03n38_713_c1 3300050490 Bacteria 8728
216 nmdc:mga00v17_5822_c1 3300050491 Bacteria 6507
217 nmdc:mga0k408_16017_c1 3300050493 Bacteria 4152
218 nmdc:mga0k408_2_c1 3300050493 Bacteria 395671
219 nmdc:mga0k408_83159_c1 3300050493 Bacteria 1876
220 nmdc:mga06z11_13_c1 3300050494 Bacteria 99903
221 nmdc:mga04h51_116_c1 3300050495 Bacteria 23330
222 nmdc:mga07m45_1_c1 3300050496 Bacteria 485809
223 nmdc:mga07m45_23388_c1 3300050496 Bacteria 3377
224 nmdc:mga07m45_66853_c1 3300050496 Bacteria 2042
225 nmdc:mga0sz30_1223_c1 3300050516 Bacteria 9170
226 nmdc:mga0sz30_33652_c1 3300050516 Bacteria 2131
227 Ga0500643_000005 3300053087 Bacteria 539775
228 Ga0500643_029176 3300053087 Bacteria 1700
229 Ga0500647_0082283 3300053091 Bacteria 1544
230 Ga0500583_0085726 3300053092 Bacteria 1528
231 Ga0500651_0018752 3300053093 Bacteria 4286
232 Ga0500595_036616 3300053119 Bacteria 1606
233 Ga0500607_002619 3300053121 Bacteria 14238
234 Ga0500607_002630 3300053121 Bacteria 14202
235 Ga0500608_003536 3300053122 Bacteria 5878
236 Ga0500614_022547 3300053123 Bacteria 1471
237 Ga0500618_006758 3300053125 Bacteria 3339
238 Ga0500655_000768 3300053133 Bacteria 6329
239 Ga0500559_0005626 3300053136 Bacteria 5742
240 Ga0500564_007958 3300053138 Bacteria 4523
241 Ga0500588_0019538 3300053146 Bacteria 1803
242 Ga0500590_005363 3300053148 Bacteria 6164
243 Ga0500604_0029010 3300053151 Bacteria 1610
244 Ga0500622_0000901 3300053156 Bacteria 25291
245 Ga0500639_102243 3300053163 Bacteria 1408
246 Ga0500567_019083 3300053723 Bacteria 3297
247 Ga0500570_000088 3300053724 Bacteria 25660
248 Ga0500625_000030 3300053729 Bacteria 51482
249 Ga0500645_039340 3300053730 Bacteria 1401
250 2511129547 2510917021 Bacteria 5705459
251 2512645569 2512564014 Bacteria 4639632
252 2643951843 2643221588 Bacteria 3692460
253 2738710947 2738541275 Bacteria 4830863
254 2738849372 2738541301 Bacteria 4834102
255 2738865101 2738541304 Bacteria 4833665
256 2739297619 2738543022 Bacteria 4835059
257 2739359297 2738543033 Bacteria 4833336
258 2739650306 2739367664 Bacteria 4114334
259 2740028779 2739367865 Bacteria 4114482
260 2809063195 2808606401 Bacteria 4586670
261 2809079370 2808606404 Bacteria 4652788
262 2809083257 2808606405 Bacteria 4586632
263 2819552915 2818991438 Bacteria 5793701
264 2848297422 2848297114 Bacteria 3608511
265 2880520464 2880518877 Bacteria 5012590
266 2882806868 2882806704 Bacteria 3007728
267 2895884377 2895880812 Bacteria 11255272
268 2919142841 2919138771 Bacteria 5281312
269 2919710706 2919709256 Bacteria 4318106
270 2928101056 2928100450 Bacteria 4837635
271 2928960534 2928959182 Bacteria 4725774
272 8054306896 8054302542 Bacteria 5698134
273 Ga0495643_0000023
274 JGI24751J29686_10000556
275 Ga0065704_10082403
276 Ga0065707_10110065
277 Ga0070658_10003004
278 Ga0070658_10077766
279 Ga0070670_100039353
280 Ga0070670_100334056
281 Ga0070666_10035401
282 Ga0070660_100016179
283 Ga0070668_100027569
284 Ga0070668_100049556
285 Ga0070669_100000840
286 Ga0070669_100003835
287 Ga0070669_100195748
288 Ga0070671_100001008
289 Ga0070671_100009463
290 Ga0070671_100046159
291 Ga0070671_100164653
292 Ga0070667_100000167
293 Ga0070667_100010173
294 Ga0070667_100017892
295 Ga0070667_100024773
296 Ga0070679_100052119
297 Ga0070679_100130425
298 Ga0070679_100418338
299 Ga0070665_100001223
300 Ga0070665_100214997
301 Ga0068855_100032364
302 Ga0070664_100201873
303 Ga0068857_100077620
304 Ga0068852_100003627
305 Ga0068859_100301104
306 Ga0068864_100003730
307 Ga0068863_100000103
308 Ga0068863_100004317
309 Ga0068863_100035411
310 Ga0068860_100000093
311 Ga0068860_100009143
312 Ga0068860_100051258
313 Ga0068862_100002133
314 Ga0068862_100002732
315 Ga0068862_100012308
316 Ga0075363_100055731
317 Ga0075364_10006299
318 Ga0075364_10020587
319 Ga0075362_10000012
320 Ga0075367_10017083
321 Ga0075369_10006498
322 Ga0075369_10013699
323 Ga0075366_10003553
324 Ga0075366_10008389
325 Ga0075366_10040866
326 Ga0075366_10081581
327 Ga0075370_10000002
328 Ga0075370_10048062
329 Ga0075370_10060366
330 Ga0097620_100301085
331 Ga0105251_10001541
332 Ga0105240_10005914
333 Ga0105247_10018519
334 Ga0105248_10139035
335 Ga0105248_10299153
336 Ga0105248_10426991
337 Ga0105238_10118207
338 Ga0157369_10229580
339 Ga0163161_10001996
340 Ga0209050_1001280
341 Ga0207697_10061813
342 Ga0207713_1000412
343 Ga0207710_10133854
344 Ga0207647_10001491
345 Ga0207705_10000007
346 Ga0207705_10005383
347 Ga0207705_10064123
348 Ga0207657_10025636
349 Ga0207649_10195986
350 Ga0207652_10007674
351 Ga0207652_10038671
352 Ga0207652_10145338
353 Ga0207681_10000499
354 Ga0207681_10001428
355 Ga0207681_10087598
356 Ga0207694_10074666
357 Ga0207644_10000008
358 Ga0207644_10002395
359 Ga0207670_10269789
360 Ga0207711_10003070
361 Ga0207711_10263667
362 Ga0207679_10426789
363 Ga0207667_10056033
364 Ga0207667_10231884
365 Ga0207712_10218091
366 Ga0207668_10040910
367 Ga0207668_10044055
368 Ga0207668_10194528
369 Ga0207640_10009604
370 Ga0207640_10012573
371 Ga0207658_10000742
372 Ga0207658_10011396
373 Ga0207658_10158920
374 Ga0207703_10558795
375 Ga0207678_10090747
376 Ga0207678_10111033
377 Ga0207678_10122993
378 Ga0207702_10005079
379 Ga0207641_10000113
380 Ga0207676_10001272
381 Ga0207676_10027966
382 Ga0207676_10138540
383 Ga0207674_10203682
384 Ga0207698_10006223
385 Ga0207698_10096108
386 Ga0207698_10107222
387 Ga0209281_1008639
388 Ga0209813_10000015
389 Ga0209974_10011414
390 Ga0209974_10034173
391 Ga0268266_10001277
392 Ga0268266_10005960
393 Ga0268265_10001942
394 Ga0268265_10043410
395 Ga0268265_10220405
396 Ga0268264_10000067
397 Ga0268264_10005066
398 Ga0268264_10099379
399 Ga0265331_10048916
400 Ga0265327_10026690
401 Ga0307408_100212311
402 Ga0307508_10003912
403 Ga0307405_10000984
404 Ga0307405_10017416
405 Ga0307405_10394588
406 Ga0307406_10031014
407 Ga0307407_10057380
408 Ga0307416_100224816
409 Ga0307416_100292933
410 Ga0307414_10028250
411 Ga0307411_10016756
412 Ga0307411_10124744
413 Ga0307415_100273995
414 Ga0316583_10007898
415 Ga0373948_0012221
416 Ga0373960_0052611
417 Ga0373931_0005630
418 Ga0316584_0021113
419 Ga0451833_1305553
420 Ga0439462_0000651
421 Ga0495627_000090
422 Ga0495650_0003423
423 Ga0495596_0000601
424 Ga0495607_0010121
425 Ga0495583_0141215
426 Ga0495606_0018840
427 Ga0495606_0023302
428 Ga0495610_0000015
429 Ga0495610_0000300
430 Ga0495610_0002353
431 Ga0495610_0091730
432 Ga0495610_0141124
433 Ga0495620_0014571
434 Ga0495632_0001260
435 Ga0495643_0008194
436 Ga0495643_0033511
437 Ga0495648_0001780
438 Ga0495654_0069226
439 Ga0495609_0013862
440 Ga0495621_0010856
441 Ga0495597_0016034
442 Ga0495668_0037965
443 Ga0495625_0013087
444 Ga0495625_0016968
445 Ga0495625_0049541
446 Ga0495671_0031996
447 Ga0495681_0000048
448 Ga0495626_0000301
449 Ga0496101_0088806
450 Ga0496104_0008468
451 Ga0496105_0003939
452 Ga0496106_0004232
453 Ga0496107_0003865
454 Ga0496108_0251513
455 Ga0496109_0305990
456 Ga0496109_0515599
457 Ga0496110_0032335
458 Ga0496110_0074035
459 Ga0496113_0017322
460 Ga0496113_0029486
461 Ga0496114_0090810
462 Ga0496116_0000284
463 Ga0496117_0039132
464 Ga0496117_0171675
465 Ga0496118_0002469
466 Ga0496118_0019451
467 Ga0496118_0032157
468 Ga0496121_0000070
469 Ga0496121_0000196
470 Ga0496121_0002183
471 Ga0496121_0007757
472 Ga0496122_0017082
473 Ga0496123_0002479
474 Ga0496124_0002571
475 Ga0496124_0046903
476 Ga0496125_0010804
477 Ga0496126_0005719
478 Ga0496126_0015023
479 Ga0501034_0144944
480 Ga0501039_0354921
481 Ga0501223_000026
482 Ga0501249_003354
483 Ga0501044_0000101
484 Ga0501044_0480504
485 nmdc:mga03683_35_c1
486 nmdc:mga03n38_254649_c1
487 nmdc:mga03n38_713_c1
488 nmdc:mga00v17_5822_c1
489 nmdc:mga0k408_16017_c1
490 nmdc:mga0k408_2_c1
491 nmdc:mga0k408_83159_c1
492 nmdc:mga06z11_13_c1
493 nmdc:mga04h51_116_c1
494 nmdc:mga07m45_1_c1
495 nmdc:mga07m45_23388_c1
496 nmdc:mga07m45_66853_c1
497 nmdc:mga0sz30_1223_c1
498 nmdc:mga0sz30_33652_c1
499 Ga0500643_000005
500 Ga0500643_029176
501 Ga0500647_0082283
502 Ga0500583_0085726
503 Ga0500651_0018752
504 Ga0500595_036616
505 Ga0500607_002619
506 Ga0500607_002630
507 Ga0500608_003536
508 Ga0500614_022547
509 Ga0500618_006758
510 Ga0500655_000768
511 Ga0500559_0005626
512 Ga0500564_007958
513 Ga0500588_0019538
514 Ga0500590_005363
515 Ga0500604_0029010
516 Ga0500622_0000901
517 Ga0500639_102243
518 Ga0500567_019083
519 Ga0500570_000088
520 Ga0500625_000030
521 Ga0500645_039340
522 2511129547
523 2512645569
524 2643951843
525 2738710947
526 2738849372
527 2738865101
528 2739297619
529 2739359297
530 2739650306
531 2740028779
532 2809063195
533 2809079370
534 2809083257
535 2819552915
536 2848297422
537 2880520464
538 2882806868
539 2895884377
540 2919142841
541 2919710706
542 2928101056
543 2928960534
544 8054306896

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01218

Coprogen_oxidas

Coproporphyrinogen III oxidase

10

287

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dwr-assembly1.cif.gz_B leishmania major coproporphyrinogen iii oxidase with bound ligand 0.859 9 271
5eo6-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemf) from acinetobacter baumannii 0.8553 9 271
5eo6-assembly1.cif.gz_B coproporphyrinogen iii oxidase (hemf) from acinetobacter baumannii 0.8539 9 271
8t7w-assembly1.cif.gz_A crystal structure of oxygen-dependent coproporphyrinogen-iii oxidase (hemf) from klebsiella aerogenes 0.8499 9 271
3e8j-assembly1.cif.gz_B coproporphyrinogen iii oxidase from leishmania naiffi 0.8464 9 271
ID Description Score Start End Superfamily
af_Q9UTE2_2_312_3.40.1500.10 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.8502 2 271 3.40.1500.10
af_Q9UTE2_2_312_3.40.1500.10 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.8442 2 271 3.40.1500.10
af_Q54IA7_2_331_3.40.1500.10 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.8416 9 271 3.40.1500.10
af_Q7XPL2_53_398_3.40.1500.10 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.8362 8 271 3.40.1500.10
3dwsA00 Alpha Beta;3-Layer(aba) Sandwich;oxygen-dependent coproporphyrinogen oxidase;Coproporphyrinogen III oxidase, aerobic 0.8361 5 271 3.40.1500.10
ID Description Score Start End GO Terms
AF-A0A3D4M0P0-F1-model_v4 deleted 0.9612 87 271
AF-A0A3B9UK18-F1-model_v4 deleted 0.958 142 271
AF-A0A848SJ21-F1-model_v4 deleted 0.9555 112 271
AF-A0A2A5BLV3-F1-model_v4 coproporphyrinogen oxidase (EC 1.3.3.3) 0.954 87 271 GO:0004109
GO:0005737
GO:0006782
AF-A0A3M1G5I1-F1-model_v4 coproporphyrinogen oxidase (EC 1.3.3.3) 0.9474 56 271 GO:0004109
GO:0005737
GO:0006782

Map