F378624

General Info

Members Datasets Scaffolds Average Seq Length
272 218 545 318

Family's Representative Sequence

Representative Sequence 3300048913|Ga0496110_0000539|Ga0496110_0000539_24161_25222
Length 353
Sequence LPLREGGYLYFLPAKGSSYILKSEEALKGVRMMKALVFEDFGGPEVLSVREIAEPEHSKSAVIVRMKAIGLNFADVYRRKGNYHLVGDPPFILGYEGAGVIEYVGEDVHHVKVGDRVGFADVPHANAELVSVPADKLLPLPEGISFETAASVLLQGLTAQYLTHDSHQVKAGETILVHAAAGGVGQLLTQMIKMKGGQVIGLTSSNDKAAVAKQMGAAHVFLYGSDWVDSIMDVTGGKGVDVVYESVGQTLMDSFKATKTGGTVVFFGMAGGDPEKIDPRMLMDTSKALIGGDLWNVLTTHEERTRRTAELFQWILSGEILIKEPTLFSLENGADAHRLLESRKSSGKILLMP

Samples

Sample ID Description Type Environment
1 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
13 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
14 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
15 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
37 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
38 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
39 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
40 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
41 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
91 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
102 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
110 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
111 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
114 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
115 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
116 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
117 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
133 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
140 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
143 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
144 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
145 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
146 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
147 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
148 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
149 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
150 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
151 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
152 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
153 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
154 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
155 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
156 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
157 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
158 2506520008 Serratia plymuthica AS12 Isolate Unclassified
159 2508501071 Serratia proteamaculans S4 Isolate Rhizosphere
160 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
161 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
162 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
163 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
164 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
165 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
166 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
167 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
168 2684622632 Bacillus cereus 905 Isolate Unclassified
169 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
170 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
171 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
172 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
173 2738541295 Bacillus sp. OK085 Isolate Unclassified
174 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
175 2738543012 Acidovorax sp. CF301 Isolate Unclassified
176 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
177 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
178 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
179 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
180 2816332133 Acidovorax radicis 2721A Isolate Unclassified
181 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
182 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
183 2831864461 Roseateles noduli HZ7 Isolate Nodule
184 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
185 2842682962 Bacillus sp. R-72492 Isolate Unclassified
186 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
187 2849139964 Bacillus sp. R-71875 Isolate Unclassified
188 2857472729 Cohnella sp. R-74144 Isolate Unclassified
189 2857581216 Bacillus sp. R-71922 Isolate Unclassified
190 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
191 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
192 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
193 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
194 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
195 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
196 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
197 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
198 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
199 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
200 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
201 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
202 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
203 2965761152 Bacillus sp. COPE52 Isolate Unclassified
204 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
205 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
206 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
207 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
208 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
209 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
210 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
211 640753048 Serratia proteamaculans 568 Isolate Endosphere
212 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
213 8023438354 Bacillus sp. BH2 Isolate Unclassified
214 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
215 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
216 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
217 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
218 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.21
Metatranscriptomes 0
Isolates 22.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.96
Nodule 2.57
Rhizoplane 3.68
Rhizosphere 48.9
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496110_0000539 3300048913 Bacteria 25812
2 JGI25159J45721_1007028 3300002987 Bacteria 3284
3 JGI25151J46595_10000248 3300003187 Bacteria 62929
4 JGI25151J46595_10013149 3300003187 Bacteria 3734
5 JGI25151J46595_10044622 3300003187 Bacteria 1572
6 JGI25153J46596_10001112 3300003215 Bacteria 16336
7 rootH1_10035144 3300003316 Bacteria 3030
8 rootH1_10045120 3300003316 Bacteria 2370
9 rootH1_10045120 3300003323 Bacteria 12026
10 rootH2_10014308 3300003320 Bacteria 6421
11 rootL2_10078425 3300003322 Bacteria 9823
12 rootH1_10026230 3300003323 Bacteria 8510
13 Ga0055539_1000222 3300003752 Bacteria 40292
14 Ga0055533_1000016 3300003756 Bacteria 396179
15 Ga0055525_1003871 3300003759 Bacteria 1306
16 Ga0055535_1000052 3300003761 Bacteria 132513
17 Ga0055529_1000239 3300003763 Bacteria 68765
18 Ga0055540_1009516 3300003792 Bacteria 3347
19 Ga0055543_1001398 3300004625 Bacteria 9628
20 Ga0065165_1000275 3300005262 Bacteria 87709
21 Ga0070683_100008237 3300005329 Bacteria 8858
22 Ga0068869_100012617 3300005334 Bacteria 5589
23 Ga0070689_100014769 3300005340 Bacteria 5681
24 Ga0070668_100299272 3300005347 Bacteria 1349
25 Ga0070669_100000010 3300005353 Bacteria 222186
26 Ga0070714_100096708 3300005435 Unclassified 2595
27 Ga0070663_100085081 3300005455 Bacteria 2333
28 Ga0070685_10006870 3300005466 Bacteria 5808
29 Ga0070679_100130833 3300005530 Bacteria 2491
30 Ga0070684_100430966 3300005535 Bacteria 1218
31 Ga0068853_100179816 3300005539 Bacteria 1918
32 Ga0070665_100000185 3300005548 Bacteria 111130
33 Ga0068855_100001679 3300005563 Bacteria 27705
34 Ga0068855_100004659 3300005563 Bacteria 16743
35 Ga0070702_100019302 3300005615 Bacteria 3553
36 Ga0068852_100096636 3300005616 Bacteria 2656
37 Ga0068861_100048734 3300005719 Bacteria 3204
38 Ga0068860_100000419 3300005843 Bacteria 54802
39 Ga0068860_100002704 3300005843 Bacteria 18445
40 Ga0075428_100069444 3300006844 Bacteria 3852
41 Ga0075431_100003539 3300006847 Bacteria 15125
42 Ga0099824_1009302 3300006942 Bacteria 12159
43 Ga0079104_1000091 3300006946 Bacteria 132682
44 Ga0079104_1000448 3300006946 Bacteria 46655
45 Ga0099826_10000144 3300006948 Bacteria 30370
46 Ga0105251_10000058 3300009011 Bacteria 103857
47 Ga0105251_10000715 3300009011 Bacteria 30569
48 Ga0105251_10002353 3300009011 Bacteria 14947
49 Ga0105244_10000027 3300009036 Bacteria 207569
50 Ga0105244_10001044 3300009036 Bacteria 23184
51 Ga0105244_10116544 3300009036 Bacteria 1296
52 Ga0105250_10001171 3300009092 Bacteria 14725
53 Ga0105247_10000630 3300009101 Bacteria 28152
54 Ga0114129_10212591 3300009147 Bacteria 2614
55 Ga0105241_10000004 3300009174 Bacteria 803007
56 Ga0157373_10000047 3300013100 Bacteria 110376
57 Ga0157373_10024176 3300013100 Bacteria 4402
58 Ga0157371_10005456 3300013102 Bacteria 10720
59 Ga0157370_10000154 3300013104 Bacteria 84734
60 Ga0157370_10001307 3300013104 Bacteria 31059
61 Ga0157370_10006256 3300013104 Bacteria 13182
62 Ga0157369_10003997 3300013105 Bacteria 17494
63 Ga0157375_10126264 3300013308 Bacteria 2673
64 Ga0182008_10002262 3300014497 Bacteria 12160
65 Ga0157376_10201112 3300014969 Bacteria 1833
66 Ga0182006_1002502 3300015261 Bacteria 9997
67 Ga0163161_10000001 3300017792 Bacteria 2041488
68 Ga0163161_10000039 3300017792 Bacteria 148130
69 Ga0163161_10230962 3300017792 Bacteria 1436
70 Ga0213872_10000657 3300021361 Bacteria 26183
71 Ga0213872_10019913 3300021361 Bacteria 3090
72 Ga0209566_100921 3300025225 Bacteria 13720
73 Ga0209674_100041 3300025226 Bacteria 396231
74 Ga0209672_106264 3300025228 Bacteria 1953
75 Ga0209563_100043 3300025230 Bacteria 397271
76 Ga0207427_100259 3300025231 Bacteria 41623
77 Ga0209258_100074 3300025242 Bacteria 271062
78 Ga0209677_100096 3300025253 Bacteria 99089
79 Ga0209148_1006185 3300025254 Bacteria 2622
80 Ga0209759_1000283 3300025256 Bacteria 70895
81 Ga0209455_1000066 3300025272 Bacteria 316811
82 Ga0209130_1000135 3300025284 Bacteria 118508
83 Ga0209130_1001294 3300025284 Bacteria 17237
84 Ga0209130_1002732 3300025284 Bacteria 8357
85 Ga0209130_1010623 3300025284 Bacteria 2521
86 Ga0209025_1000053 3300025294 Bacteria 317600
87 Ga0209025_1000101 3300025294 Bacteria 228507
88 Ga0209025_1001710 3300025294 Bacteria 26713
89 Ga0209025_1003325 3300025294 Bacteria 15456
90 Ga0209025_1003967 3300025294 Bacteria 13281
91 Ga0209025_1005018 3300025294 Bacteria 11051
92 Ga0209025_1005369 3300025294 Bacteria 10489
93 Ga0209025_1007814 3300025294 Bacteria 7860
94 Ga0209025_1015787 3300025294 Bacteria 4519
95 Ga0209025_1016742 3300025294 Bacteria 4293
96 Ga0209758_1004433 3300025297 Bacteria 11693
97 Ga0207426_1000196 3300025302 Bacteria 146687
98 Ga0209051_1007992 3300025303 Bacteria 5680
99 Ga0207696_1000001 3300025711 Bacteria 2579611
100 Ga0207696_1042090 3300025711 Bacteria 1332
101 Ga0207655_1000011 3300025728 Bacteria 643321
102 Ga0207655_1000038 3300025728 Bacteria 348340
103 Ga0207713_1000024 3300025735 Bacteria 339156
104 Ga0207713_1000026 3300025735 Bacteria 319032
105 Ga0207713_1000459 3300025735 Bacteria 42687
106 Ga0207710_10000049 3300025900 Bacteria 186492
107 Ga0207654_10000006 3300025911 Bacteria 815027
108 Ga0207663_10007553 3300025916 Bacteria 5642
109 Ga0207649_10108420 3300025920 Bacteria 1851
110 Ga0207681_10000011 3300025923 Bacteria 366878
111 Ga0207686_10037856 3300025934 Bacteria 2914
112 Ga0207670_10017759 3300025936 Bacteria 4307
113 Ga0207704_10138877 3300025938 Bacteria 1696
114 Ga0207689_10008179 3300025942 Bacteria 9113
115 Ga0207661_10021724 3300025944 Bacteria 4814
116 Ga0207661_10032197 3300025944 Bacteria 4059
117 Ga0207667_10000203 3300025949 Bacteria 86134
118 Ga0207667_10002543 3300025949 Bacteria 22682
119 Ga0207712_10413284 3300025961 Bacteria 1137
120 Ga0207678_10015245 3300026067 Bacteria 6761
121 Ga0207698_10074067 3300026142 Bacteria 2714
122 Ga0209281_1000008 3300027111 Bacteria 867470
123 Ga0209281_1000400 3300027111 Bacteria 66633
124 Ga0268266_10000345 3300028379 Bacteria 72371
125 Ga0268264_10002643 3300028381 Bacteria 15652
126 Ga0237817_10008 3300030083 Bacteria 80875
127 Ga0237817_10069 3300030083 Bacteria 33357
128 Ga0307509_10001650 3300031507 Bacteria 37384
129 Ga0307516_10012872 3300031730 Bacteria 8976
130 Ga0307516_10019577 3300031730 Bacteria 7008
131 Ga0307413_10000021 3300031824 Bacteria 41741
132 Ga0307414_10127592 3300032004 Bacteria 1968
133 Ga0307411_10000004 3300032005 Bacteria 460327
134 Ga0395898_0025858 3300037466 Bacteria 5910
135 Ga0395905_0022054 3300037471 Bacteria 6024
136 Ga0400483_008396 3300039062 Bacteria 3305
137 Ga0400483_058799 3300039062 Bacteria 1263
138 Ga0400483_283439 3300039062 Bacteria 2392
139 Ga0436365_1904181 3300039437 Bacteria 2258
140 Ga0436361_0215379 3300039447 Bacteria 26255
141 Ga0436361_0243554 3300039447 Bacteria 21209
142 Ga0439447_003243 3300041407 Bacteria 5788
143 Ga0450907_008172 3300042146 Bacteria 1741
144 Ga0466957_0126430 3300044842 Bacteria 1634
145 Ga0466967_0045590 3300045976 Bacteria 3810
146 Ga0495627_000028 3300046453 Bacteria 234737
147 Ga0495653_0000002 3300046463 Bacteria 507262
148 Ga0495583_0000062 3300046506 Bacteria 195151
149 Ga0495606_0000030 3300046507 Bacteria 249484
150 Ga0495606_0001633 3300046507 Bacteria 29221
151 Ga0495606_0071141 3300046507 Bacteria 2191
152 Ga0495610_0055320 3300046512 Bacteria 1913
153 Ga0495654_0000962 3300046530 Bacteria 21282
154 Ga0495654_0070600 3300046530 Bacteria 1656
155 Ga0495668_0036896 3300046616 Bacteria 2737
156 Ga0495625_0040397 3300046660 Bacteria 3403
157 Ga0495625_0150467 3300046660 Bacteria 1565
158 Ga0495669_0035339 3300046684 Bacteria 2206
159 Ga0495669_0126319 3300046684 Bacteria 1202
160 Ga0495649_0000247 3300046694 Bacteria 47906
161 Ga0495589_0000002 3300046794 Bacteria 758846
162 Ga0495589_0019255 3300046794 Bacteria 3501
163 Ga0495660_0024081 3300046810 Bacteria 3469
164 Ga0495676_0131874 3300047321 Bacteria 1803
165 Ga0495686_0000055 3300047472 Bacteria 255566
166 Ga0496101_0031408 3300048904 Bacteria 3733
167 Ga0496103_0048559 3300048906 Bacteria 2623
168 Ga0496107_0029802 3300048910 Bacteria 3886
169 Ga0496108_0258980 3300048911 Bacteria 1514
170 Ga0496109_0145432 3300048912 Bacteria 2218
171 Ga0496110_0090129 3300048913 Bacteria 2742
172 Ga0496111_0065961 3300048914 Bacteria 2628
173 Ga0496114_0131601 3300048917 Bacteria 2161
174 Ga0496115_0034675 3300048918 Bacteria 3988
175 Ga0496116_0000023 3300048919 Bacteria 475792
176 Ga0496116_0000024 3300048919 Bacteria 471420
177 Ga0496117_0034822 3300048920 Bacteria 3788
178 Ga0496117_0094636 3300048920 Bacteria 1911
179 Ga0496119_0024385 3300048922 Bacteria 4257
180 Ga0496120_0014838 3300048923 Bacteria 5168
181 Ga0496121_0020918 3300048924 Bacteria 6440
182 Ga0496121_0074583 3300048924 Bacteria 2713
183 Ga0496122_0111188 3300048925 Bacteria 1798
184 Ga0496123_0005179 3300048926 Bacteria 13264
185 Ga0496124_0012238 3300048927 Bacteria 8486
186 Ga0496125_0000018 3300048928 Bacteria 482390
187 Ga0496125_0015806 3300048928 Bacteria 7274
188 Ga0496126_0009467 3300048929 Bacteria 10339
189 Ga0501031_0089010 3300049568 Bacteria 2013
190 Ga0501067_0005440 3300049583 Bacteria 7071
191 Ga0501249_004851 3300049679 Bacteria 2739
192 Ga0501249_011714 3300049679 Bacteria 1844
193 Ga0501266_000002 3300049763 Bacteria 459947
194 nmdc:mga05p37_275193_c1 3300050507 Bacteria 2010
195 Ga0500635_0048222 3300053080 Bacteria 1450
196 Ga0500635_0066971 3300053080 Bacteria 1266
197 Ga0500578_0045185 3300053086 Bacteria 2827
198 Ga0500578_0088235 3300053086 Bacteria 1970
199 Ga0500644_0043172 3300053088 Bacteria 1507
200 Ga0500646_0012490 3300053090 Bacteria 2192
201 Ga0500647_0154412 3300053091 Bacteria 1069
202 Ga0500566_0000904 3300053094 Bacteria 16987
203 Ga0500641_0000028 3300053096 Bacteria 105996
204 Ga0500650_0074794 3300053098 Bacteria 1584
205 Ga0500595_000176 3300053119 Bacteria 42910
206 Ga0500618_000013 3300053125 Bacteria 183026
207 Ga0500658_0000002 3300053134 Bacteria 548440
208 Ga0500559_0027716 3300053136 Bacteria 2418
209 Ga0500603_002513 3300053150 Bacteria 4007
210 Ga0500636_0011960 3300053177 Bacteria 5083
211 Ga0500584_026864 3300053726 Bacteria 2677
212 2506577436 2506520007 Bacteria 5442880
213 2506582574 2506520008 Bacteria 5443009
214 2508851372 2508501071 Bacteria 5454741
215 2553391924 2551306519 Bacteria 5465154
216 2644009305 2643221600 Bacteria 5530138
217 2644374046 2643221667 Bacteria 5627472
218 2644427074 2643221676 Bacteria 8119172
219 2644643832 2643221716 Bacteria 4986332
220 2644681727 2643221725 Bacteria 5087956
221 2656278350 2654587920 Bacteria 5475511
222 2672337879 2671180330 Bacteria 5521719
223 2685151455 2684622632 Bacteria 5380049
224 2689443910 2687453601 Bacteria 5546041
225 2698321809 2695420987 Bacteria 6152737
226 2738732961 2738541279 Bacteria 6149495
227 2738765499 2738541285 Bacteria 6150075
228 2738815204 2738541295 Bacteria 5730091
229 2739214542 2738543007 Bacteria 6149845
230 2739240875 2738543012 Bacteria 7115078
231 2740002955 2739367857 Bacteria 5433684
232 2740007772 2739367858 Bacteria 5432813
233 2802654645 2802428842 Bacteria 4926114
234 2807180852 2806310673 Bacteria 4801221
235 2816472045 2816332133 Bacteria 7249298
236 2816861724 2816332186 Bacteria 5331395
237 2821445833 2821443989 Bacteria 7658172
238 2831870271 2831864461 Bacteria 6502356
239 2837187122 2837183177 Bacteria 4637169
240 2842687015 2842682962 Bacteria 5589973
241 2844539728 2844533157 Bacteria 7517899
242 2849143601 2849139964 Bacteria 5613304
243 2857478823 2857472729 Bacteria 6568124
244 2857585156 2857581216 Bacteria 5522813
245 2857617155 2857613821 Bacteria 4917088
246 2857619835 2857618242 Bacteria 5635925
247 2869553291 2869551831 Bacteria 5474685
248 2881364204 2881359912 Bacteria 4935907
249 2888584759 2888578766 Bacteria 6743310
250 2889052779 2889049205 Bacteria 7524325
251 2903898754 2903895155 Bacteria 5258610
252 2904422292 2904419702 Bacteria 5166287
253 2904558606 2904555929 Bacteria 5218588
254 2904761807 2904755435 Bacteria 7986759
255 2907204008 2907202186 Bacteria 6632024
256 2919194331 2919191525 Bacteria 5765973
257 2947430160 2947426588 Bacteria 5357194
258 2965764735 2965761152 Bacteria 5806513
259 2977271975 2977268062 Bacteria 5243061
260 2979087068 2979083700 Bacteria 5894929
261 2990280526 2990275345 Bacteria 4887158
262 3001274384 3001272096 Bacteria 4729684
263 3001894648 3001892409 Bacteria 6328293
264 3006977259 3006973921 Bacteria 4423788
265 3006985076 3006984091 Bacteria 4207523
266 640936932 640753048 Bacteria 5495657
267 8022623227 8022621104 Bacteria 5241040
268 8023440232 8023438354 Bacteria 5779374
269 8054281962 8054280661 Bacteria 4232245
270 8054311534 8054307821 Bacteria 5212224
271 8055423465 8055419101 Bacteria 5289643
272 8055633584 8055632911 Bacteria 5283357
273 8057585907 8057582654 Bacteria 5218944
274 Ga0496110_0000539
275 JGI25159J45721_1007028
276 JGI25151J46595_10000248
277 JGI25151J46595_10013149
278 JGI25151J46595_10044622
279 JGI25153J46596_10001112
280 rootH1_10035144
281 rootH1_10045120
282 rootH2_10014308
283 rootL2_10078425
284 rootH1_10026230
285 Ga0055539_1000222
286 Ga0055533_1000016
287 Ga0055525_1003871
288 Ga0055535_1000052
289 Ga0055529_1000239
290 Ga0055540_1009516
291 Ga0055543_1001398
292 Ga0065165_1000275
293 Ga0070683_100008237
294 Ga0068869_100012617
295 Ga0070689_100014769
296 Ga0070668_100299272
297 Ga0070669_100000010
298 Ga0070714_100096708
299 Ga0070663_100085081
300 Ga0070685_10006870
301 Ga0070679_100130833
302 Ga0070684_100430966
303 Ga0068853_100179816
304 Ga0070665_100000185
305 Ga0068855_100001679
306 Ga0068855_100004659
307 Ga0070702_100019302
308 Ga0068852_100096636
309 Ga0068861_100048734
310 Ga0068860_100000419
311 Ga0068860_100002704
312 Ga0075428_100069444
313 Ga0075431_100003539
314 Ga0099824_1009302
315 Ga0079104_1000091
316 Ga0079104_1000448
317 Ga0099826_10000144
318 Ga0105251_10000058
319 Ga0105251_10000715
320 Ga0105251_10002353
321 Ga0105244_10000027
322 Ga0105244_10001044
323 Ga0105244_10116544
324 Ga0105250_10001171
325 Ga0105247_10000630
326 Ga0114129_10212591
327 Ga0105241_10000004
328 Ga0157373_10000047
329 Ga0157373_10024176
330 Ga0157371_10005456
331 Ga0157370_10000154
332 Ga0157370_10001307
333 Ga0157370_10006256
334 Ga0157369_10003997
335 Ga0157375_10126264
336 Ga0182008_10002262
337 Ga0157376_10201112
338 Ga0182006_1002502
339 Ga0163161_10000001
340 Ga0163161_10000039
341 Ga0163161_10230962
342 Ga0213872_10000657
343 Ga0213872_10019913
344 Ga0209566_100921
345 Ga0209674_100041
346 Ga0209672_106264
347 Ga0209563_100043
348 Ga0207427_100259
349 Ga0209258_100074
350 Ga0209677_100096
351 Ga0209148_1006185
352 Ga0209759_1000283
353 Ga0209455_1000066
354 Ga0209130_1000135
355 Ga0209130_1001294
356 Ga0209130_1002732
357 Ga0209130_1010623
358 Ga0209025_1000053
359 Ga0209025_1000101
360 Ga0209025_1001710
361 Ga0209025_1003325
362 Ga0209025_1003967
363 Ga0209025_1005018
364 Ga0209025_1005369
365 Ga0209025_1007814
366 Ga0209025_1015787
367 Ga0209025_1016742
368 Ga0209758_1004433
369 Ga0207426_1000196
370 Ga0209051_1007992
371 Ga0207696_1000001
372 Ga0207696_1042090
373 Ga0207655_1000011
374 Ga0207655_1000038
375 Ga0207713_1000024
376 Ga0207713_1000026
377 Ga0207713_1000459
378 Ga0207710_10000049
379 Ga0207654_10000006
380 Ga0207663_10007553
381 Ga0207649_10108420
382 Ga0207681_10000011
383 Ga0207686_10037856
384 Ga0207670_10017759
385 Ga0207704_10138877
386 Ga0207689_10008179
387 Ga0207661_10021724
388 Ga0207661_10032197
389 Ga0207667_10000203
390 Ga0207667_10002543
391 Ga0207712_10413284
392 Ga0207678_10015245
393 Ga0207698_10074067
394 Ga0209281_1000008
395 Ga0209281_1000400
396 Ga0268266_10000345
397 Ga0268264_10002643
398 Ga0237817_10008
399 Ga0237817_10069
400 Ga0307509_10001650
401 Ga0307516_10012872
402 Ga0307516_10019577
403 Ga0307413_10000021
404 Ga0307414_10127592
405 Ga0307411_10000004
406 Ga0395898_0025858
407 Ga0395905_0022054
408 Ga0400483_008396
409 Ga0400483_058799
410 Ga0400483_283439
411 Ga0436365_1904181
412 Ga0436361_0215379
413 Ga0436361_0243554
414 Ga0439447_003243
415 Ga0450907_008172
416 Ga0466957_0126430
417 Ga0466967_0045590
418 Ga0495627_000028
419 Ga0495653_0000002
420 Ga0495583_0000062
421 Ga0495606_0000030
422 Ga0495606_0001633
423 Ga0495606_0071141
424 Ga0495610_0055320
425 Ga0495654_0000962
426 Ga0495654_0070600
427 Ga0495668_0036896
428 Ga0495625_0040397
429 Ga0495625_0150467
430 Ga0495669_0035339
431 Ga0495669_0126319
432 Ga0495649_0000247
433 Ga0495589_0000002
434 Ga0495589_0019255
435 Ga0495660_0024081
436 Ga0495676_0131874
437 Ga0495686_0000055
438 Ga0496101_0031408
439 Ga0496103_0048559
440 Ga0496107_0029802
441 Ga0496108_0258980
442 Ga0496109_0145432
443 Ga0496110_0090129
444 Ga0496111_0065961
445 Ga0496114_0131601
446 Ga0496115_0034675
447 Ga0496116_0000023
448 Ga0496116_0000024
449 Ga0496117_0034822
450 Ga0496117_0094636
451 Ga0496119_0024385
452 Ga0496120_0014838
453 Ga0496121_0020918
454 Ga0496121_0074583
455 Ga0496122_0111188
456 Ga0496123_0005179
457 Ga0496124_0012238
458 Ga0496125_0000018
459 Ga0496125_0015806
460 Ga0496126_0009467
461 Ga0501031_0089010
462 Ga0501067_0005440
463 Ga0501249_004851
464 Ga0501249_011714
465 Ga0501266_000002
466 nmdc:mga05p37_275193_c1
467 Ga0500635_0048222
468 Ga0500635_0066971
469 Ga0500578_0045185
470 Ga0500578_0088235
471 Ga0500644_0043172
472 Ga0500646_0012490
473 Ga0500647_0154412
474 Ga0500566_0000904
475 Ga0500641_0000028
476 Ga0500650_0074794
477 Ga0500595_000176
478 Ga0500618_000013
479 Ga0500658_0000002
480 Ga0500559_0027716
481 Ga0500603_002513
482 Ga0500636_0011960
483 Ga0500584_026864
484 2506577436
485 2506582574
486 2508851372
487 2553391924
488 2644009305
489 2644374046
490 2644427074
491 2644643832
492 2644681727
493 2656278350
494 2672337879
495 2685151455
496 2689443910
497 2698321809
498 2738732961
499 2738765499
500 2738815204
501 2739214542
502 2739240875
503 2740002955
504 2740007772
505 2802654645
506 2807180852
507 2816472045
508 2816861724
509 2821445833
510 2831870271
511 2837187122
512 2842687015
513 2844539728
514 2849143601
515 2857478823
516 2857585156
517 2857617155
518 2857619835
519 2869553291
520 2881364204
521 2888584759
522 2889052779
523 2903898754
524 2904422292
525 2904558606
526 2904761807
527 2907204008
528 2919194331
529 2947430160
530 2965764735
531 2977271975
532 2979087068
533 2990280526
534 3001274384
535 3001894648
536 3006977259
537 3006985076
538 640936932
539 8022623227
540 8023440232
541 8054281962
542 8054311534
543 8055423465
544 8055633584
545 8057585907

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

183

314

0.92

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

215

351

0.87

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

58

172

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9684 2 321
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9682 1 321
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9652 1 321
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9625 2 321
4rvu-assembly2.cif.gz_C the native structure of mycobacterial rv1454c complexed with nadph 0.9586 1 321
ID Description Score Start End Superfamily
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9806 124 263 3.40.50.720
af_O74489_1_324_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9709 2 320 3.40.50.300
af_Q336S6_1_326_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9704 2 321 3.90.180.10
af_Q336S6_1_326_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9645 2 321 3.90.180.10
af_O74489_128_266_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9631 128 263 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4U2ZS59-F1-model_v4 Zinc-binding dehydrogenase 0.9804 1 196 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A5B7AB61-F1-model_v4 Putative quinone oxidoreductase isoform X2 (EC 1.6.5.5) 0.978 122 321 GO:0003960
GO:0005829
GO:0035925
GO:0070402
AF-A0A4U2ZS59-F1-model_v4 Zinc-binding dehydrogenase 0.9755 1 196 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A2I4GKZ9-F1-model_v4 Quinone oxidoreductase 1 0.9748 2 321 GO:0003960
GO:0005829
GO:0035925
GO:0070402
AF-A0A7V8TXS2-F1-model_v4 NADPH2:quinone reductase 0.9746 136 321 GO:0003960
GO:0005829
GO:0035925
GO:0070402

Map