F378638

General Info

Members Datasets Scaffolds Average Seq Length
272 204 544 302

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0106843|Ga0496122_0106843_691_1713
Length 340
Sequence LTPCLRALQAIFIQIRERNELKTMSKSFAFVFPGQGSQSVGMLDGWGDHPVVAQTLQEASDALGEDVAGLIKNGPKEALALTTNTQPVMLVAGVAAWRMWRAEGGAAPAVVAGHSLGEYSALVASGVLTLAQAAPLVRLRATAMQEAVPVGVGAMAAILGMDSDKVIAGCAEAAASFGAASTEVVEAVNFNDPIQTVIAGTKAGVDKACEVLKAAGAKRALLLPVSAPFHSSLMKPAAEKLREALASLELAAPQIPVLNNVDVVVQHDAHAMRDALYRQAFGPVRWVETVQALKARGLTHIIECGPGKVLAGLTKRIDPELVGASLYDPATLAEIKELLA

Samples

Sample ID Description Type Environment
1 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
9 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
45 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
46 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
71 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
72 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
74 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
75 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
76 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
77 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
78 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
113 3300027252 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
115 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
121 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
122 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
123 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
124 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
125 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
129 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
133 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
134 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
135 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
136 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
137 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
138 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
139 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
140 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
141 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
142 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
143 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
144 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
145 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
146 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
147 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
148 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
149 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
150 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
151 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
152 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
153 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
154 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
155 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
156 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
157 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
158 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
159 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
160 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
161 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
162 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
163 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
167 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
168 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
171 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
172 3300049526 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_B_7_control Metagenome Rhizosphere
173 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
176 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
177 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
178 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
181 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
182 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
183 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
184 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
185 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
186 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
187 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
188 2547132374 Acidovorax radicis N35 Isolate Unclassified
189 2643221570 Acidovorax sp. Root568 Isolate Unclassified
190 2643221596 Acidovorax sp. Root70 Isolate Unclassified
191 2643221652 Acidovorax sp. Root402 Isolate Unclassified
192 2643221717 Acidovorax sp. Root267 Isolate Unclassified
193 2721755523 Delftia sp. HK171 Isolate Unclassified
194 2738543012 Acidovorax sp. CF301 Isolate Unclassified
195 2816332133 Acidovorax radicis 2721A Isolate Unclassified
196 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
197 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
198 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
199 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
200 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
201 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
202 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
203 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
204 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.54
Metatranscriptomes 1.84
Isolates 6.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.07
Nodule 1.84
Rhizoplane 0.74
Rhizosphere 69.49
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496122_0106843 3300048925 Bacteria 1852
2 JGI25156J39149_1000031 3300002705 Bacteria 124983
3 JGI25154J39366_1000049 3300002738 Bacteria 124995
4 JGI25157J39369_1000041 3300002741 Bacteria 124982
5 JGI25150J39212_1016259 3300002774 Bacteria 1223
6 rootH1_10030322 3300003323 Bacteria 2066
7 Ga0055526_1006936 3300003771 Bacteria 6024
8 Ga0055534_1012844 3300003784 Bacteria 1638
9 Ga0055540_1015370 3300003792 Bacteria 2232
10 Ga0055531_10000007 3300003794 Bacteria 225289
11 Ga0055531_10001660 3300003794 Bacteria 16067
12 Ga0070690_100060829 3300005330 Bacteria 2432
13 Ga0070670_100069766 3300005331 Bacteria 3017
14 Ga0070677_10106554 3300005333 Bacteria 1245
15 Ga0068869_100039358 3300005334 Bacteria 3375
16 Ga0068868_100029629 3300005338 Bacteria 4192
17 Ga0068868_100118979 3300005338 Bacteria 2153
18 Ga0070668_100059494 3300005347 Bacteria 2957
19 Ga0070668_100221730 3300005347 Bacteria 1560
20 Ga0070669_100025473 3300005353 Bacteria 4249
21 Ga0070675_100003109 3300005354 Bacteria 12548
22 Ga0070675_100040565 3300005354 Bacteria 3801
23 Ga0070671_100007969 3300005355 Bacteria 8473
24 Ga0070674_100015402 3300005356 Bacteria 4772
25 Ga0070674_100252951 3300005356 Bacteria 1385
26 Ga0070673_100004001 3300005364 Bacteria 9274
27 Ga0070673_100048299 3300005364 Bacteria 3317
28 Ga0070673_100178661 3300005364 Bacteria 1816
29 Ga0070659_100422224 3300005366 Bacteria 1128
30 Ga0070667_100013325 3300005367 Bacteria 6793
31 Ga0070663_100000279 3300005455 Bacteria 25824
32 Ga0070678_100052226 3300005456 Bacteria 2967
33 Ga0068867_100000143 3300005459 Bacteria 45972
34 Ga0068867_100020583 3300005459 Bacteria 4700
35 Ga0068867_100437605 3300005459 Bacteria 1111
36 Ga0070672_100031131 3300005543 Bacteria 4013
37 Ga0070672_100037585 3300005543 Bacteria 3695
38 Ga0068857_100047278 3300005577 Bacteria 3820
39 Ga0068852_100156611 3300005616 Bacteria 2123
40 Ga0068852_100269946 3300005616 Bacteria 1637
41 Ga0068859_100010409 3300005617 Bacteria 9357
42 Ga0068864_100007218 3300005618 Bacteria 9132
43 Ga0068864_100033353 3300005618 Bacteria 4377
44 Ga0068851_10105027 3300005834 Bacteria 1503
45 Ga0068863_100004212 3300005841 Bacteria 14206
46 Ga0068860_100175581 3300005843 Bacteria 2070
47 Ga0075365_10069284 3300006038 Bacteria 2371
48 Ga0075364_10022442 3300006051 Bacteria 3986
49 Ga0075367_10006239 3300006178 Bacteria 6006
50 Ga0075366_10103994 3300006195 Bacteria 1706
51 Ga0075366_10112469 3300006195 Bacteria 1639
52 Ga0097621_100166569 3300006237 Bacteria 1897
53 Ga0075370_10001038 3300006353 Bacteria 11543
54 Ga0075370_10013172 3300006353 Bacteria 4389
55 Ga0075370_10088040 3300006353 Bacteria 1790
56 Ga0068871_100023328 3300006358 Bacteria 4783
57 Ga0068871_100335808 3300006358 Bacteria 1333
58 Ga0075430_100399790 3300006846 Bacteria 1134
59 Ga0097620_100010409 3300006931 Bacteria 9357
60 Ga0099823_1000021 3300006944 Bacteria 76133
61 Ga0079104_1000002 3300006946 Bacteria 514469
62 Ga0105250_10000528 3300009092 Bacteria 26590
63 Ga0105240_10042781 3300009093 Bacteria 5770
64 Ga0105243_10004406 3300009148 Bacteria 11134
65 Ga0105241_10045096 3300009174 Bacteria 3343
66 Ga0105242_10001240 3300009176 Bacteria 20102
67 Ga0105248_10031617 3300009177 Bacteria 5913
68 Ga0105237_10001228 3300009545 Bacteria 34145
69 Ga0105238_10007843 3300009551 Bacteria 10675
70 Ga0105249_10309457 3300009553 Bacteria 1587
71 Ga0099796_10064609 3300010159 Bacteria 1306
72 Ga0105239_10000942 3300010375 Bacteria 41042
73 Ga0157369_10000252 3300013105 Bacteria 73217
74 Ga0157374_10016678 3300013296 Bacteria 6462
75 Ga0163162_10087163 3300013306 Bacteria 3200
76 Ga0157372_10683015 3300013307 Bacteria 1195
77 Ga0157375_10035193 3300013308 Bacteria 4778
78 Ga0157375_10163340 3300013308 Bacteria 2370
79 Ga0163163_10090632 3300014325 Bacteria 3071
80 Ga0157380_10089964 3300014326 Bacteria 2531
81 Ga0157377_10004640 3300014745 Bacteria 6356
82 Ga0157379_10208191 3300014968 Bacteria 1770
83 Ga0157376_10028611 3300014969 Bacteria 4431
84 Ga0157376_10067176 3300014969 Bacteria 3032
85 Ga0163161_10080993 3300017792 Bacteria 2390
86 Ga0206356_10640373 3300020070 Bacteria 3150
87 Ga0206354_10913120 3300020081 Bacteria 2683
88 Ga0206353_10126844 3300020082 Bacteria 5549
89 Ga0213872_10002408 3300021361 Bacteria 11037
90 Ga0224712_10000008 3300022467 Bacteria 28961
91 Ga0209435_100014 3300025206 Bacteria 322129
92 Ga0207425_1016813 3300025245 Bacteria 1618
93 Ga0209646_1000001 3300025246 Bacteria 3092932
94 Ga0209026_1000073 3300025250 Bacteria 205399
95 Ga0209759_1000013 3300025256 Bacteria 399300
96 Ga0209565_1000981 3300025263 Bacteria 14683
97 Ga0209673_1007222 3300025273 Bacteria 5173
98 Ga0209675_1008385 3300025291 Bacteria 3807
99 Ga0209025_1034039 3300025294 Bacteria 2338
100 Ga0209564_1000008 3300025295 Bacteria 953227
101 Ga0209758_1010829 3300025297 Bacteria 5388
102 Ga0209050_1015525 3300025298 Bacteria 3190
103 Ga0209051_1000469 3300025303 Bacteria 52936
104 Ga0209051_1001250 3300025303 Bacteria 22747
105 Ga0209051_1017981 3300025303 Bacteria 3144
106 Ga0209257_1000021 3300025304 Bacteria 771986
107 Ga0209257_1002583 3300025304 Bacteria 17605
108 Ga0209257_1025697 3300025304 Bacteria 2005
109 Ga0207696_1004770 3300025711 Bacteria 5765
110 Ga0207682_10046358 3300025893 Bacteria 1786
111 Ga0207695_10033747 3300025913 Bacteria 5576
112 Ga0207671_10003332 3300025914 Bacteria 16139
113 Ga0207681_10015119 3300025923 Bacteria 4813
114 Ga0207694_10010506 3300025924 Bacteria 6985
115 Ga0207650_10006944 3300025925 Bacteria 7719
116 Ga0207650_10060656 3300025925 Bacteria 2823
117 Ga0207650_10338432 3300025925 Bacteria 1235
118 Ga0207659_10092158 3300025926 Bacteria 2265
119 Ga0207687_10104205 3300025927 Bacteria 2093
120 Ga0207686_10002088 3300025934 Bacteria 11005
121 Ga0207709_10000015 3300025935 Bacteria 493221
122 Ga0207691_10009460 3300025940 Bacteria 9359
123 Ga0207691_10010405 3300025940 Bacteria 8923
124 Ga0207691_10037469 3300025940 Bacteria 4491
125 Ga0207711_10212738 3300025941 Bacteria 1766
126 Ga0207689_10032072 3300025942 Bacteria 4371
127 Ga0207679_10125215 3300025945 Bacteria 2052
128 Ga0207651_10060248 3300025960 Bacteria 2634
129 Ga0207658_10229812 3300025986 Bacteria 1565
130 Ga0207677_10210605 3300026023 Bacteria 1552
131 Ga0207678_10001700 3300026067 Bacteria 20180
132 Ga0207678_10115488 3300026067 Bacteria 2290
133 Ga0207641_10008953 3300026088 Bacteria 8271
134 Ga0207648_10000019 3300026089 Bacteria 144209
135 Ga0207648_10004761 3300026089 Bacteria 13859
136 Ga0207648_10036335 3300026089 Bacteria 4339
137 Ga0207676_10013146 3300026095 Bacteria 5942
138 Ga0207676_10370102 3300026095 Bacteria 1331
139 Ga0207675_100067283 3300026118 Bacteria 3348
140 Ga0207683_10004585 3300026121 Bacteria 11903
141 Ga0207683_10094802 3300026121 Bacteria 2660
142 Ga0207683_10113723 3300026121 Bacteria 2424
143 Ga0207683_10116049 3300026121 Bacteria 2400
144 Ga0207698_10147714 3300026142 Bacteria 2035
145 Ga0209281_1000007 3300027111 Bacteria 938265
146 Ga0209973_1000739 3300027252 Bacteria 2604
147 Ga0209389_1000341 3300027296 Bacteria 28381
148 Ga0209970_1000654 3300027614 Bacteria 6009
149 Ga0209971_1000709 3300027682 Bacteria 8579
150 Ga0209966_1000009 3300027695 Bacteria 86456
151 Ga0209974_10001341 3300027876 Bacteria 8852
152 Ga0268265_10274860 3300028380 Bacteria 1504
153 Ga0307515_10025887 3300028794 Bacteria 10124
154 Ga0265332_10000009 3300031238 Bacteria 295760
155 Ga0265316_10000430 3300031344 Bacteria 47823
156 Ga0307408_100000040 3300031548 Bacteria 175456
157 Ga0307408_100022604 3300031548 Bacteria 4276
158 Ga0307405_10057870 3300031731 Bacteria 2437
159 Ga0307406_10001789 3300031901 Bacteria 11747
160 Ga0307412_10026624 3300031911 Bacteria 3597
161 Ga0307412_10049142 3300031911 Bacteria 2778
162 Ga0307412_10090281 3300031911 Bacteria 2141
163 Ga0307412_10273507 3300031911 Bacteria 1323
164 Ga0307414_10020737 3300032004 Bacteria 4104
165 Ga0307411_10159918 3300032005 Bacteria 1685
166 Ga0373951_0009123 3300035091 Bacteria 2235
167 Ga0395905_0002152 3300037471 Bacteria 22342
168 Ga0395905_0003697 3300037471 Bacteria 16192
169 Ga0395905_0006866 3300037471 Bacteria 11382
170 Ga0395901_0000011 3300038443 Bacteria 400724
171 Ga0436361_0508128 3300039447 Bacteria 12467
172 Ga0451845_0038645 3300041501 Bacteria 1269
173 Ga0439449_0113510 3300042007 Bacteria 1004
174 Ga0439455_0022318 3300042012 Bacteria 1516
175 Ga0439462_0004405 3300042015 Bacteria 3435
176 Ga0450911_000530 3300042115 Bacteria 12036
177 Ga0450890_006106 3300042127 Bacteria 1544
178 Ga0450892_000434 3300042130 Bacteria 4887
179 Ga0450889_000524 3300042144 Bacteria 4274
180 Ga0450893_0007932 3300042532 Bacteria 1726
181 Ga0451577_0000641 3300042876 Bacteria 55722
182 Ga0451577_0001505 3300042876 Bacteria 30794
183 Ga0451577_0004811 3300042876 Bacteria 14099
184 Ga0453683_0039428 3300044673 Bacteria 2969
185 Ga0466965_0007030 3300044683 Bacteria 5151
186 Ga0466966_0022458 3300044684 Bacteria 4139
187 Ga0466961_0008646 3300044693 Bacteria 6489
188 Ga0466963_0026556 3300044694 Bacteria 3704
189 Ga0466963_0199406 3300044694 Bacteria 1400
190 Ga0466964_0006713 3300044706 Bacteria 4291
191 Ga0453684_0001818 3300044712 Bacteria 56168
192 Ga0453684_0060491 3300044712 Bacteria 4871
193 Ga0453684_0516891 3300044712 Bacteria 1320
194 Ga0466971_0005683 3300044719 Bacteria 5421
195 Ga0466957_0007332 3300044842 Bacteria 6232
196 Ga0466957_0057377 3300044842 Bacteria 2383
197 Ga0466959_0001023 3300045049 Bacteria 16675
198 Ga0451576_0002104 3300045051 Bacteria 31012
199 Ga0451576_0029056 3300045051 Bacteria 5917
200 Ga0451576_0120268 3300045051 Bacteria 2734
201 Ga0451576_0131846 3300045051 Bacteria 2605
202 Ga0451576_0200248 3300045051 Bacteria 2086
203 Ga0451576_0544931 3300045051 Bacteria 1219
204 Ga0466958_0015084 3300045836 Bacteria 4421
205 Ga0495590_0002350 3300046457 Bacteria 7856
206 Ga0495632_0126901 3300046519 Bacteria 1189
207 Ga0495654_0007194 3300046530 Bacteria 6243
208 Ga0495587_0226880 3300046536 Bacteria 1053
209 Ga0495598_0077765 3300046537 Bacteria 1058
210 Ga0495597_0000110 3300046542 Bacteria 72678
211 Ga0495633_0001452 3300046558 Bacteria 18400
212 Ga0495625_0004282 3300046660 Bacteria 13577
213 Ga0495660_0005060 3300046810 Bacteria 7921
214 Ga0496114_0052020 3300048917 Bacteria 3411
215 Ga0496114_0198232 3300048917 Bacteria 1758
216 Ga0496121_0013956 3300048924 Bacteria 8583
217 Ga0496122_0061070 3300048925 Bacteria 2769
218 Ga0496123_0023594 3300048926 Bacteria 4704
219 Ga0496123_0088317 3300048926 Bacteria 1852
220 Ga0496123_0151508 3300048926 Bacteria 1250
221 Ga0496124_0000596 3300048927 Bacteria 60853
222 Ga0496124_0008511 3300048927 Bacteria 10717
223 Ga0496124_0037519 3300048927 Bacteria 4214
224 Ga0496125_0003109 3300048928 Bacteria 20660
225 Ga0496125_0004135 3300048928 Bacteria 16946
226 Ga0496125_0007345 3300048928 Bacteria 11735
227 Ga0496125_0008584 3300048928 Bacteria 10671
228 Ga0496126_0073155 3300048929 Bacteria 3048
229 Ga0496126_0218224 3300048929 Bacteria 1603
230 Ga0501310_000174 3300049130 Bacteria 6257
231 Ga0501292_000822 3300049515 Bacteria 3783
232 Ga0501303_002676 3300049526 Bacteria 1389
233 Ga0501031_0001847 3300049568 Bacteria 13324
234 Ga0501031_0220941 3300049568 Bacteria 1234
235 Ga0501034_0192507 3300049571 Bacteria 2001
236 Ga0501222_007698 3300049662 Bacteria 1437
237 Ga0501229_000123 3300049706 Bacteria 8116
238 Ga0501262_002231 3300049759 Bacteria 2189
239 Ga0501266_000163 3300049763 Bacteria 8551
240 Ga0501044_0180520 3300049823 Bacteria 2078
241 nmdc:mga00v17_14711_c1 3300050491 Bacteria 3423
242 nmdc:mga00v17_154686_c1 3300050491 Bacteria 1474
243 nmdc:mga0yw44_182485_c1 3300050492 Bacteria 1382
244 nmdc:mga0k408_266732_c1 3300050493 Bacteria 1022
245 nmdc:mga0k408_297582_c1 3300050493 Bacteria 963
246 nmdc:mga0k408_31100_c1 3300050493 Bacteria 3046
247 nmdc:mga0k408_9868_c1 3300050493 Bacteria 4712
248 nmdc:mga07m45_110490_c1 3300050496 Bacteria 1583
249 nmdc:mga07m45_156084_c1 3300050496 Bacteria 1324
250 nmdc:mga07m45_36441_c1 3300050496 Bacteria 2740
251 nmdc:mga07m45_76637_c1 3300050496 Bacteria 1906
252 Ga0500622_0002218 3300053156 Bacteria 14323
253 Ga0500634_0013627 3300053161 Bacteria 4270
254 Ga0466962_0004862 3300061719 Bacteria 6466
255 2511246693 2511231002 Bacteria 5042903
256 2548499941 2547132374 Bacteria 5530232
257 2643868171 2643221570 Bacteria 5103772
258 2643993834 2643221596 Bacteria 5006805
259 2644293778 2643221652 Bacteria 5140275
260 2644644741 2643221717 Bacteria 5676132
261 2722882220 2721755523 Bacteria 6430384
262 2739241262 2738543012 Bacteria 7115078
263 2816473428 2816332133 Bacteria 7249298
264 2839142375 2839138175 Bacteria 6549354
265 2842721367 2842718218 Bacteria 4560148
266 2881105475 2881101125 Bacteria 4590519
267 2894026944 2894023352 Bacteria 5167372
268 2904483467 2904479285 Bacteria 5073931
269 2932423741 2932422444 Bacteria 4678430
270 2939632640 2939631187 Bacteria 6118131
271 2974322549 2974320154 Bacteria 4571377
272 2990713469 2990710928 Bacteria 5002431
273 Ga0496122_0106843
274 JGI25156J39149_1000031
275 JGI25154J39366_1000049
276 JGI25157J39369_1000041
277 JGI25150J39212_1016259
278 rootH1_10030322
279 Ga0055526_1006936
280 Ga0055534_1012844
281 Ga0055540_1015370
282 Ga0055531_10000007
283 Ga0055531_10001660
284 Ga0070690_100060829
285 Ga0070670_100069766
286 Ga0070677_10106554
287 Ga0068869_100039358
288 Ga0068868_100029629
289 Ga0068868_100118979
290 Ga0070668_100059494
291 Ga0070668_100221730
292 Ga0070669_100025473
293 Ga0070675_100003109
294 Ga0070675_100040565
295 Ga0070671_100007969
296 Ga0070674_100015402
297 Ga0070674_100252951
298 Ga0070673_100004001
299 Ga0070673_100048299
300 Ga0070673_100178661
301 Ga0070659_100422224
302 Ga0070667_100013325
303 Ga0070663_100000279
304 Ga0070678_100052226
305 Ga0068867_100000143
306 Ga0068867_100020583
307 Ga0068867_100437605
308 Ga0070672_100031131
309 Ga0070672_100037585
310 Ga0068857_100047278
311 Ga0068852_100156611
312 Ga0068852_100269946
313 Ga0068859_100010409
314 Ga0068864_100007218
315 Ga0068864_100033353
316 Ga0068851_10105027
317 Ga0068863_100004212
318 Ga0068860_100175581
319 Ga0075365_10069284
320 Ga0075364_10022442
321 Ga0075367_10006239
322 Ga0075366_10103994
323 Ga0075366_10112469
324 Ga0097621_100166569
325 Ga0075370_10001038
326 Ga0075370_10013172
327 Ga0075370_10088040
328 Ga0068871_100023328
329 Ga0068871_100335808
330 Ga0075430_100399790
331 Ga0097620_100010409
332 Ga0099823_1000021
333 Ga0079104_1000002
334 Ga0105250_10000528
335 Ga0105240_10042781
336 Ga0105243_10004406
337 Ga0105241_10045096
338 Ga0105242_10001240
339 Ga0105248_10031617
340 Ga0105237_10001228
341 Ga0105238_10007843
342 Ga0105249_10309457
343 Ga0099796_10064609
344 Ga0105239_10000942
345 Ga0157369_10000252
346 Ga0157374_10016678
347 Ga0163162_10087163
348 Ga0157372_10683015
349 Ga0157375_10035193
350 Ga0157375_10163340
351 Ga0163163_10090632
352 Ga0157380_10089964
353 Ga0157377_10004640
354 Ga0157379_10208191
355 Ga0157376_10028611
356 Ga0157376_10067176
357 Ga0163161_10080993
358 Ga0206356_10640373
359 Ga0206354_10913120
360 Ga0206353_10126844
361 Ga0213872_10002408
362 Ga0224712_10000008
363 Ga0209435_100014
364 Ga0207425_1016813
365 Ga0209646_1000001
366 Ga0209026_1000073
367 Ga0209759_1000013
368 Ga0209565_1000981
369 Ga0209673_1007222
370 Ga0209675_1008385
371 Ga0209025_1034039
372 Ga0209564_1000008
373 Ga0209758_1010829
374 Ga0209050_1015525
375 Ga0209051_1000469
376 Ga0209051_1001250
377 Ga0209051_1017981
378 Ga0209257_1000021
379 Ga0209257_1002583
380 Ga0209257_1025697
381 Ga0207696_1004770
382 Ga0207682_10046358
383 Ga0207695_10033747
384 Ga0207671_10003332
385 Ga0207681_10015119
386 Ga0207694_10010506
387 Ga0207650_10006944
388 Ga0207650_10060656
389 Ga0207650_10338432
390 Ga0207659_10092158
391 Ga0207687_10104205
392 Ga0207686_10002088
393 Ga0207709_10000015
394 Ga0207691_10009460
395 Ga0207691_10010405
396 Ga0207691_10037469
397 Ga0207711_10212738
398 Ga0207689_10032072
399 Ga0207679_10125215
400 Ga0207651_10060248
401 Ga0207658_10229812
402 Ga0207677_10210605
403 Ga0207678_10001700
404 Ga0207678_10115488
405 Ga0207641_10008953
406 Ga0207648_10000019
407 Ga0207648_10004761
408 Ga0207648_10036335
409 Ga0207676_10013146
410 Ga0207676_10370102
411 Ga0207675_100067283
412 Ga0207683_10004585
413 Ga0207683_10094802
414 Ga0207683_10113723
415 Ga0207683_10116049
416 Ga0207698_10147714
417 Ga0209281_1000007
418 Ga0209973_1000739
419 Ga0209389_1000341
420 Ga0209970_1000654
421 Ga0209971_1000709
422 Ga0209966_1000009
423 Ga0209974_10001341
424 Ga0268265_10274860
425 Ga0307515_10025887
426 Ga0265332_10000009
427 Ga0265316_10000430
428 Ga0307408_100000040
429 Ga0307408_100022604
430 Ga0307405_10057870
431 Ga0307406_10001789
432 Ga0307412_10026624
433 Ga0307412_10049142
434 Ga0307412_10090281
435 Ga0307412_10273507
436 Ga0307414_10020737
437 Ga0307411_10159918
438 Ga0373951_0009123
439 Ga0395905_0002152
440 Ga0395905_0003697
441 Ga0395905_0006866
442 Ga0395901_0000011
443 Ga0436361_0508128
444 Ga0451845_0038645
445 Ga0439449_0113510
446 Ga0439455_0022318
447 Ga0439462_0004405
448 Ga0450911_000530
449 Ga0450890_006106
450 Ga0450892_000434
451 Ga0450889_000524
452 Ga0450893_0007932
453 Ga0451577_0000641
454 Ga0451577_0001505
455 Ga0451577_0004811
456 Ga0453683_0039428
457 Ga0466965_0007030
458 Ga0466966_0022458
459 Ga0466961_0008646
460 Ga0466963_0026556
461 Ga0466963_0199406
462 Ga0466964_0006713
463 Ga0453684_0001818
464 Ga0453684_0060491
465 Ga0453684_0516891
466 Ga0466971_0005683
467 Ga0466957_0007332
468 Ga0466957_0057377
469 Ga0466959_0001023
470 Ga0451576_0002104
471 Ga0451576_0029056
472 Ga0451576_0120268
473 Ga0451576_0131846
474 Ga0451576_0200248
475 Ga0451576_0544931
476 Ga0466958_0015084
477 Ga0495590_0002350
478 Ga0495632_0126901
479 Ga0495654_0007194
480 Ga0495587_0226880
481 Ga0495598_0077765
482 Ga0495597_0000110
483 Ga0495633_0001452
484 Ga0495625_0004282
485 Ga0495660_0005060
486 Ga0496114_0052020
487 Ga0496114_0198232
488 Ga0496121_0013956
489 Ga0496122_0061070
490 Ga0496123_0023594
491 Ga0496123_0088317
492 Ga0496123_0151508
493 Ga0496124_0000596
494 Ga0496124_0008511
495 Ga0496124_0037519
496 Ga0496125_0003109
497 Ga0496125_0004135
498 Ga0496125_0007345
499 Ga0496125_0008584
500 Ga0496126_0073155
501 Ga0496126_0218224
502 Ga0501310_000174
503 Ga0501292_000822
504 Ga0501303_002676
505 Ga0501031_0001847
506 Ga0501031_0220941
507 Ga0501034_0192507
508 Ga0501222_007698
509 Ga0501229_000123
510 Ga0501262_002231
511 Ga0501266_000163
512 Ga0501044_0180520
513 nmdc:mga00v17_14711_c1
514 nmdc:mga00v17_154686_c1
515 nmdc:mga0yw44_182485_c1
516 nmdc:mga0k408_266732_c1
517 nmdc:mga0k408_297582_c1
518 nmdc:mga0k408_31100_c1
519 nmdc:mga0k408_9868_c1
520 nmdc:mga07m45_110490_c1
521 nmdc:mga07m45_156084_c1
522 nmdc:mga07m45_36441_c1
523 nmdc:mga07m45_76637_c1
524 Ga0500622_0002218
525 Ga0500634_0013627
526 Ga0466962_0004862
527 2511246693
528 2548499941
529 2643868171
530 2643993834
531 2644293778
532 2644644741
533 2722882220
534 2739241262
535 2816473428
536 2839142375
537 2842721367
538 2881105475
539 2894026944
540 2904483467
541 2932423741
542 2939632640
543 2974322549
544 2990713469

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00698

Acyl_transf_1

Acyl transferase domain

29

317

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ezo-assembly1.cif.gz_A crystal structure of acyl-carrier-protein s-malonyltransferase from burkholderia pseudomallei 1710b 0.9696 3 313
2g2y-assembly1.cif.gz_A structure of e.coli fabd complexed with malonate 0.9693 3 311
6smd-assembly2.cif.gz_C plmcat:antf (holo): type ii pks acyl-carrier protein in complex with its malonyl-transacylase 0.968 2 314
3h0p-assembly1.cif.gz_A 2.0 angstrom crystal structure of an acyl carrier protein s-malonyltransferase from salmonella typhimurium. 0.9658 2 311
3tqe-assembly1.cif.gz_A structure of the malonyl coa-acyl carrier protein transacylase (fabd) from coxiella burnetii 0.9658 2 315
ID Description Score Start End Superfamily
af_P0AAI9_6_286_3.20.10.10 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.9657 7 291 3.20.10.10
af_P0AAI9_6_286_3.20.10.10 Alpha Beta;Alpha-Beta Barrel;D-amino Acid Aminotransferase; Chain A, domain 2;D-amino Acid Aminotransferase, subunit A, domain 2 0.959 7 291 3.20.10.10
3tqeA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Malonyl-CoA ACP transacylase, ACP-binding 0.9539 124 202 3.30.70.250
2g1hA01 Alpha Beta;3-Layer(aba) Sandwich;Malonyl-Coenzyme A Acyl Carrier Protein; domain 2;Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.9525 3 313 3.40.366.10
3ptwA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Malonyl-CoA ACP transacylase, ACP-binding 0.9473 127 202 3.30.70.250
ID Description Score Start End GO Terms
AF-A0A377XV24-F1-model_v4 [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39) 0.985 132 274 GO:0004314
GO:0005829
GO:0006633
AF-A0A1B8P4I9-F1-model_v4 [acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39) 0.9834 88 314 GO:0004314
GO:0005829
GO:0006633
AF-A0A3D1RZB1-F1-model_v4 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) 0.982 35 310 GO:0004314
GO:0005829
GO:0006633
AF-A0A656GXY9-F1-model_v4 deleted 0.9801 25 192
AF-A0A2T8QRA5-F1-model_v4 deleted 0.9801 204 313

Map