F378690

General Info

Members Datasets Scaffolds Average Seq Length
272 189 544 597

Family's Representative Sequence

Representative Sequence 3300053080|Ga0500635_0000200|Ga0500635_0000200_10828_12777
Length 649
Sequence MTSASERAKAASPRSLSGLLPFLRPYRGRIAAAILFLILAALTTLAFPMALRKLIDGGLAVGGSTGPLTGANAAAANGARLVGLRDHFLQLFGVGIALGIFSALRFYSVTWLGERVTADLRSAVYRHVVKQSPAFFETNATGEVLSRLTTDTTLVQQVVGSSLSMGLRNGVMGLGAMVMLIVTNPYVMTQVLGILLLVVAPSMAFGRRVRKLSRASQDRVADSSAIAAEVLNAIPVVQSYTQESREAARFEVSTEHAFDTAKKRTRVRSMLVAFIISATFGALLWGLYQGTQAVIDGKISAGHLGETVVYVMLLVSSVAVLSEVYGDLLRAAGATERLMELLAAVSPVTDPASPVPLPLRGAAARAAAPEQGGVGPSGAGSATSQAGISGSSIELRHVQFNYPSRPLHAALSDFSLRVRPGETVALVGPSGAGKSTVFQLLERFYDTGAGSVLVDGVDVRTTSLGELRARIGIVPQDSTVFSANAMENIRYGRPDATDDEVIAAARAAFADEFILRLPEGYQTFLGERGVRLSGGQRQRIAIARAMLKNPPLLLLDEATSALDAESERMVQAALEAAMADRTTLVIAHRLATVKKADRIIVMEQGRIVEEGNHQELMQRDGLYAKLARMQFHTDPIDPAAETAESREAA

Samples

Sample ID Description Type Environment
1 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
8 3300003347 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM Metagenome Rhizosphere
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
23 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
46 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
58 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
59 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
64 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
65 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
66 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
68 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
69 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
101 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
109 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
110 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
111 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
112 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
113 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
114 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
115 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
116 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
117 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
118 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
119 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
120 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
121 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
122 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
123 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
124 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
125 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
126 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
130 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
131 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
132 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
135 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
136 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
137 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
141 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
142 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
143 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
144 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
145 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
146 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
147 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
148 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
149 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
157 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
158 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
159 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
160 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
161 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
162 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
171 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
172 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
173 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
174 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
175 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
176 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
177 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
178 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
179 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
180 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
181 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
182 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
183 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
184 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
185 2643221645 Massilia sp. Root351 Isolate Unclassified
186 2643221660 Methylibium sp. Root1272 Isolate Unclassified
187 2831864461 Roseateles noduli HZ7 Isolate Nodule
188 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
189 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.16
Metatranscriptomes 0
Isolates 1.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 33.09
Nodule 1.1
Rhizoplane 3.68
Rhizosphere 51.47
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500635_0000200 3300053080 Bacteria 30015
2 JGI25155J39150_1000051 3300002704 Bacteria 76772
3 JGI25156J39149_1000155 3300002705 Bacteria 50271
4 JGI25156J39149_1000196 3300002705 Bacteria 42272
5 JGI25156J39149_1000335 3300002705 Bacteria 31030
6 JGI25154J39366_1000170 3300002738 Bacteria 50275
7 JGI25154J39366_1000527 3300002738 Bacteria 19218
8 JGI25154J39366_1001811 3300002738 Bacteria 6688
9 JGI25158J39367_1002609 3300002739 Bacteria 2900
10 JGI25157J39369_1000091 3300002741 Bacteria 76837
11 JGI25157J39369_1000367 3300002741 Bacteria 31008
12 JGI25159J45721_1005438 3300002987 Bacteria 3998
13 JGI26128J50194_1000004 3300003347 Bacteria 7373
14 Ga0055539_1000042 3300003752 Bacteria 199725
15 Ga0055539_1000708 3300003752 Bacteria 8502
16 Ga0055533_1000006 3300003756 Bacteria 635559
17 Ga0055525_1000021 3300003759 Bacteria 370802
18 Ga0055526_1000601 3300003771 Bacteria 28171
19 Ga0055526_1002821 3300003771 Bacteria 11503
20 Ga0055526_1004741 3300003771 Bacteria 8058
21 Ga0055526_1005383 3300003771 Bacteria 7372
22 Ga0055537_1000187 3300003773 Bacteria 46437
23 Ga0055524_1000006 3300003775 Bacteria 324702
24 Ga0055524_1000102 3300003775 Bacteria 105348
25 Ga0055524_1000270 3300003775 Bacteria 51977
26 Ga0055524_1014330 3300003775 Bacteria 2943
27 Ga0055536_1009096 3300003781 Bacteria 4166
28 Ga0055530_10000154 3300003791 Bacteria 61878
29 Ga0055530_10003273 3300003791 Bacteria 9421
30 Ga0055540_1000005 3300003792 Bacteria 378126
31 Ga0055531_10000078 3300003794 Bacteria 105599
32 Ga0055531_10000692 3300003794 Bacteria 28709
33 Ga0055531_10012074 3300003794 Bacteria 4094
34 Ga0055543_1000845 3300004625 Bacteria 14818
35 Ga0065165_1000092 3300005262 Bacteria 148435
36 Ga0065165_1000270 3300005262 Bacteria 88828
37 Ga0070658_10023102 3300005327 Bacteria 4992
38 Ga0070658_10085778 3300005327 Bacteria 2590
39 Ga0070676_10009941 3300005328 Bacteria 5149
40 Ga0070690_100005808 3300005330 Bacteria 6952
41 Ga0070690_100015532 3300005330 Bacteria 4545
42 Ga0068869_100022898 3300005334 Bacteria 4308
43 Ga0070666_10006803 3300005335 Bacteria 7044
44 Ga0070669_100003175 3300005353 Bacteria 11814
45 Ga0070675_100028960 3300005354 Bacteria 4462
46 Ga0070667_100006570 3300005367 Bacteria 9667
47 Ga0070662_100008344 3300005457 Bacteria 6749
48 Ga0070672_100012432 3300005543 Bacteria 5975
49 Ga0068855_100029807 3300005563 Bacteria 6524
50 Ga0068857_100002299 3300005577 Bacteria 15548
51 Ga0068852_100017976 3300005616 Bacteria 5561
52 Ga0068851_10026521 3300005834 Bacteria 2848
53 Ga0068851_10030884 3300005834 Bacteria 2659
54 Ga0068863_100043579 3300005841 Bacteria 4259
55 Ga0068858_100044157 3300005842 Bacteria 4132
56 Ga0068860_100006288 3300005843 Bacteria 11930
57 Ga0068862_100103717 3300005844 Bacteria 2491
58 Ga0075362_10000568 3300006177 Bacteria 10775
59 Ga0075367_10035103 3300006178 Bacteria 2901
60 Ga0075366_10002779 3300006195 Bacteria 9063
61 Ga0075366_10006953 3300006195 Bacteria 6230
62 Ga0075370_10000936 3300006353 Bacteria 12008
63 Ga0075370_10002600 3300006353 Bacteria 8415
64 Ga0075430_100017558 3300006846 Bacteria 6093
65 Ga0075429_100000492 3300006880 Bacteria 29664
66 Ga0099823_1042344 3300006944 Bacteria 3193
67 Ga0079104_1019349 3300006946 Bacteria 1905
68 Ga0105240_10017584 3300009093 Bacteria 9633
69 Ga0105237_10072902 3300009545 Bacteria 3427
70 Ga0105249_10027073 3300009553 Bacteria 5172
71 Ga0105239_10085302 3300010375 Bacteria 3480
72 Ga0157319_1000006 3300012497 Bacteria 361506
73 Ga0163162_10002098 3300013306 Bacteria 18714
74 Ga0163162_10098807 3300013306 Bacteria 3009
75 Ga0157375_10009268 3300013308 Bacteria 8637
76 Ga0182008_10001659 3300014497 Bacteria 14678
77 Ga0182008_10006658 3300014497 Bacteria 6433
78 Ga0182007_10002829 3300015262 Bacteria 8449
79 Ga0163161_10045245 3300017792 Bacteria 3173
80 Ga0213872_10000409 3300021361 Bacteria 35220
81 Ga0213872_10001066 3300021361 Bacteria 18945
82 Ga0213872_10002864 3300021361 Bacteria 9857
83 Ga0209435_100062 3300025206 Bacteria 77288
84 Ga0209674_100003 3300025226 Bacteria 2196646
85 Ga0209563_100005 3300025230 Bacteria 1774893
86 Ga0209563_100010 3300025230 Bacteria 1337457
87 Ga0207427_100483 3300025231 Bacteria 21515
88 Ga0209258_100902 3300025242 Bacteria 15306
89 Ga0207425_1005960 3300025245 Bacteria 3399
90 Ga0209646_1000001 3300025246 Bacteria 3092932
91 Ga0209646_1000062 3300025246 Bacteria 252045
92 Ga0209026_1000026 3300025250 Bacteria 352109
93 Ga0209026_1000224 3300025250 Bacteria 77298
94 Ga0209677_100026 3300025253 Bacteria 382520
95 Ga0209677_100200 3300025253 Bacteria 48019
96 Ga0209677_101111 3300025253 Bacteria 12624
97 Ga0209759_1000013 3300025256 Bacteria 399300
98 Ga0209759_1000640 3300025256 Bacteria 32650
99 Ga0209129_1005004 3300025258 Bacteria 4884
100 Ga0209565_1000246 3300025263 Bacteria 57871
101 Ga0209565_1007175 3300025263 Bacteria 3032
102 Ga0209673_1000043 3300025273 Bacteria 291503
103 Ga0209130_1000741 3300025284 Bacteria 28625
104 Ga0209675_1001031 3300025291 Bacteria 17390
105 Ga0209675_1018346 3300025291 Bacteria 1961
106 Ga0209676_1000004 3300025292 Bacteria 1138360
107 Ga0209676_1000007 3300025292 Bacteria 1029371
108 Ga0209676_1011137 3300025292 Bacteria 3660
109 Ga0209676_1019471 3300025292 Bacteria 2334
110 Ga0209025_1002489 3300025294 Bacteria 19371
111 Ga0209564_1000003 3300025295 Bacteria 1585848
112 Ga0209564_1000285 3300025295 Bacteria 102585
113 Ga0209564_1000877 3300025295 Bacteria 40004
114 Ga0209758_1025496 3300025297 Bacteria 2592
115 Ga0209050_1000002 3300025298 Bacteria 1792849
116 Ga0209050_1000003 3300025298 Bacteria 1609245
117 Ga0209050_1012309 3300025298 Bacteria 3937
118 Ga0209256_1000001 3300025299 Bacteria 2166974
119 Ga0209256_1000011 3300025299 Bacteria 865309
120 Ga0209256_1000053 3300025299 Bacteria 298731
121 Ga0209256_1000873 3300025299 Bacteria 37313
122 Ga0207426_1001826 3300025302 Bacteria 15753
123 Ga0209051_1000002 3300025303 Bacteria 1631846
124 Ga0209051_1000003 3300025303 Bacteria 1609245
125 Ga0209051_1002172 3300025303 Bacteria 14538
126 Ga0209051_1002619 3300025303 Bacteria 12642
127 Ga0209051_1002742 3300025303 Bacteria 12211
128 Ga0209051_1012844 3300025303 Bacteria 4027
129 Ga0209051_1023761 3300025303 Bacteria 2540
130 Ga0209257_1000002 3300025304 Bacteria 1767052
131 Ga0209257_1000020 3300025304 Bacteria 773356
132 Ga0209257_1000032 3300025304 Bacteria 680354
133 Ga0209257_1001305 3300025304 Bacteria 30352
134 Ga0209257_1007837 3300025304 Bacteria 6312
135 Ga0207645_10005142 3300025907 Bacteria 9567
136 Ga0207695_10004435 3300025913 Bacteria 19151
137 Ga0207660_10116539 3300025917 Bacteria 2018
138 Ga0207657_10005484 3300025919 Bacteria 13247
139 Ga0207709_10025109 3300025935 Bacteria 3409
140 Ga0207691_10007675 3300025940 Bacteria 10383
141 Ga0207689_10021771 3300025942 Bacteria 5390
142 Ga0207702_10001022 3300026078 Bacteria 28730
143 Ga0207641_10015698 3300026088 Bacteria 6205
144 Ga0207648_10016073 3300026089 Bacteria 6856
145 Ga0207674_10025473 3300026116 Bacteria 6307
146 Ga0207698_10015532 3300026142 Bacteria 5101
147 Ga0209966_1000029 3300027695 Bacteria 65037
148 Ga0307515_10000195 3300028794 Bacteria 148138
149 Ga0307515_10019122 3300028794 Bacteria 12351
150 Ga0265328_10006028 3300031239 Bacteria 5160
151 Ga0265327_10000425 3300031251 Bacteria 77143
152 Ga0265327_10032764 3300031251 Bacteria 2905
153 Ga0307513_10000054 3300031456 Bacteria 148887
154 Ga0307408_100012367 3300031548 Bacteria 5650
155 Ga0307514_10006387 3300031649 Bacteria 10274
156 Ga0307516_10001457 3300031730 Bacteria 32730
157 Ga0395899_0000012 3300037312 Bacteria 517561
158 Ga0395899_0002251 3300037312 Bacteria 15775
159 Ga0395899_0008511 3300037312 Bacteria 7902
160 Ga0395899_0051594 3300037312 Bacteria 3052
161 Ga0395900_0000378 3300037418 Bacteria 64374
162 Ga0395900_0022497 3300037418 Bacteria 6448
163 Ga0395898_0032889 3300037466 Bacteria 5177
164 Ga0395905_0001198 3300037471 Bacteria 32426
165 Ga0395905_0002276 3300037471 Bacteria 21549
166 Ga0395905_0010954 3300037471 Bacteria 8777
167 Ga0395901_0128679 3300038443 Bacteria 2661
168 Ga0436361_0240598 3300039447 Bacteria 30904
169 Ga0436361_0554943 3300039447 Bacteria 41374
170 Ga0439436_0000276 3300041404 Bacteria 12437
171 Ga0439447_005339 3300041407 Bacteria 4283
172 Ga0439461_0005576 3300041410 Bacteria 2151
173 Ga0439466_0000744 3300041411 Bacteria 12348
174 Ga0439466_0002226 3300041411 Bacteria 7596
175 Ga0439465_0000727 3300041413 Bacteria 10163
176 Ga0439433_0000352 3300041999 Bacteria 8146
177 Ga0439445_0001109 3300042004 Bacteria 5748
178 Ga0439432_001649 3300042006 Bacteria 8368
179 Ga0439449_0001933 3300042007 Bacteria 8138
180 Ga0439449_0005141 3300042007 Bacteria 5029
181 Ga0439452_004476 3300042010 Bacteria 4680
182 Ga0439457_001248 3300042014 Bacteria 7635
183 Ga0439462_0002062 3300042015 Bacteria 4613
184 Ga0450911_000383 3300042115 Bacteria 14755
185 Ga0450890_001837 3300042127 Bacteria 3006
186 Ga0439446_0001477 3300042156 Bacteria 5370
187 Ga0439434_0001345 3300042435 Bacteria 7084
188 Ga0450893_0008659 3300042532 Bacteria 1657
189 Ga0451577_0002513 3300042876 Bacteria 21729
190 Ga0451577_0010597 3300042876 Bacteria 8791
191 Ga0451577_0011718 3300042876 Bacteria 8276
192 Ga0451577_0016835 3300042876 Bacteria 6762
193 Ga0451577_0023586 3300042876 Bacteria 5609
194 Ga0466969_0008048 3300044656 Bacteria 5599
195 Ga0466972_0000201 3300044658 Bacteria 43791
196 Ga0466972_0006867 3300044658 Bacteria 5713
197 Ga0453683_0002946 3300044673 Bacteria 12812
198 Ga0466965_0000627 3300044683 Bacteria 12889
199 Ga0466965_0009197 3300044683 Bacteria 4589
200 Ga0466966_0010499 3300044684 Bacteria 6153
201 Ga0466966_0014463 3300044684 Bacteria 5224
202 Ga0466964_0008968 3300044706 Bacteria 3763
203 Ga0466960_0013423 3300044901 Bacteria 3481
204 Ga0466960_0039382 3300044901 Bacteria 2229
205 Ga0451576_0000862 3300045051 Bacteria 58528
206 Ga0451576_0088132 3300045051 Bacteria 3228
207 Ga0495590_0001273 3300046457 Bacteria 10960
208 Ga0495653_0006237 3300046463 Bacteria 9782
209 Ga0495583_0000210 3300046506 Bacteria 98597
210 Ga0495583_0003552 3300046506 Bacteria 11756
211 Ga0495606_0001127 3300046507 Bacteria 38097
212 Ga0495606_0002233 3300046507 Bacteria 23052
213 Ga0495616_0018175 3300046513 Bacteria 3864
214 Ga0495630_0063078 3300046517 Bacteria 2784
215 Ga0495631_0000366 3300046518 Bacteria 31016
216 Ga0495632_0000156 3300046519 Bacteria 70702
217 Ga0495648_0012590 3300046524 Bacteria 6299
218 Ga0495666_0012427 3300046526 Bacteria 4244
219 Ga0495652_0004029 3300046529 Bacteria 14215
220 Ga0495665_0001008 3300046531 Bacteria 14939
221 Ga0495587_0027289 3300046536 Bacteria 3477
222 Ga0495621_0030477 3300046539 Bacteria 1844
223 Ga0495622_0007805 3300046557 Bacteria 4968
224 Ga0495656_0000269 3300046615 Bacteria 18414
225 Ga0495625_0025123 3300046660 Bacteria 4522
226 Ga0495623_0044704 3300046679 Bacteria 2814
227 Ga0495649_0001379 3300046694 Bacteria 18379
228 Ga0495600_0004211 3300046809 Bacteria 8586
229 Ga0495600_0008466 3300046809 Bacteria 6320
230 Ga0495604_0003012 3300047317 Bacteria 13476
231 Ga0495686_0005793 3300047472 Bacteria 9636
232 Ga0495686_0013760 3300047472 Bacteria 5605
233 Ga0495593_0014460 3300047673 Bacteria 4486
234 Ga0495602_0038080 3300048088 Bacteria 4453
235 Ga0496102_0000058 3300048905 Bacteria 168714
236 Ga0496102_0014242 3300048905 Bacteria 6910
237 Ga0496103_0015274 3300048906 Bacteria 4566
238 Ga0496103_0072950 3300048906 Bacteria 2150
239 Ga0496104_0024905 3300048907 Bacteria 5511
240 Ga0496106_0019081 3300048909 Bacteria 5083
241 Ga0496107_0072003 3300048910 Bacteria 2512
242 Ga0496109_0020582 3300048912 Bacteria 5828
243 Ga0496110_0034648 3300048913 Bacteria 4375
244 Ga0496114_0009203 3300048917 Bacteria 7835
245 Ga0496118_0016484 3300048921 Bacteria 6776
246 Ga0496118_0095239 3300048921 Bacteria 2033
247 Ga0496121_0048310 3300048924 Bacteria 3621
248 Ga0496124_0013068 3300048927 Bacteria 8130
249 Ga0496124_0089109 3300048927 Bacteria 2520
250 Ga0496125_0010453 3300048928 Bacteria 9387
251 Ga0495678_001220 3300049459 Bacteria 21076
252 Ga0501198_000071 3300049649 Bacteria 27325
253 Ga0501222_000080 3300049662 Bacteria 27300
254 nmdc:mga03683_1801_c1 3300050489 Bacteria 6496
255 nmdc:mga03683_3299_c1 3300050489 Bacteria 5184
256 nmdc:mga0k408_18626_c1 3300050493 Bacteria 3877
257 nmdc:mga07m45_465_c1 3300050496 Bacteria 17039
258 Ga0500607_007084 3300053121 Bacteria 6988
259 Ga0500559_0002836 3300053136 Bacteria 8756
260 Ga0500559_0006297 3300053136 Bacteria 5363
261 Ga0500589_022759 3300053147 Bacteria 2885
262 Ga0500622_0008453 3300053156 Bacteria 5761
263 Ga0500636_0000052 3300053177 Bacteria 55675
264 Ga0500637_0005288 3300053178 Bacteria 6237
265 Ga0500625_001263 3300053729 Bacteria 8449
266 Ga0500645_019898 3300053730 Bacteria 2084
267 Ga0466962_0012506 3300061719 Bacteria 4080
268 2644253545 2643221645 Bacteria 7207331
269 2644337538 2643221660 Bacteria 4208257
270 2831867461 2831864461 Bacteria 6502356
271 2881101164 2881101125 Bacteria 4590519
272 2886851883 2886848708 Bacteria 5632523
273 Ga0500635_0000200
274 JGI25155J39150_1000051
275 JGI25156J39149_1000155
276 JGI25156J39149_1000196
277 JGI25156J39149_1000335
278 JGI25154J39366_1000170
279 JGI25154J39366_1000527
280 JGI25154J39366_1001811
281 JGI25158J39367_1002609
282 JGI25157J39369_1000091
283 JGI25157J39369_1000367
284 JGI25159J45721_1005438
285 JGI26128J50194_1000004
286 Ga0055539_1000042
287 Ga0055539_1000708
288 Ga0055533_1000006
289 Ga0055525_1000021
290 Ga0055526_1000601
291 Ga0055526_1002821
292 Ga0055526_1004741
293 Ga0055526_1005383
294 Ga0055537_1000187
295 Ga0055524_1000006
296 Ga0055524_1000102
297 Ga0055524_1000270
298 Ga0055524_1014330
299 Ga0055536_1009096
300 Ga0055530_10000154
301 Ga0055530_10003273
302 Ga0055540_1000005
303 Ga0055531_10000078
304 Ga0055531_10000692
305 Ga0055531_10012074
306 Ga0055543_1000845
307 Ga0065165_1000092
308 Ga0065165_1000270
309 Ga0070658_10023102
310 Ga0070658_10085778
311 Ga0070676_10009941
312 Ga0070690_100005808
313 Ga0070690_100015532
314 Ga0068869_100022898
315 Ga0070666_10006803
316 Ga0070669_100003175
317 Ga0070675_100028960
318 Ga0070667_100006570
319 Ga0070662_100008344
320 Ga0070672_100012432
321 Ga0068855_100029807
322 Ga0068857_100002299
323 Ga0068852_100017976
324 Ga0068851_10026521
325 Ga0068851_10030884
326 Ga0068863_100043579
327 Ga0068858_100044157
328 Ga0068860_100006288
329 Ga0068862_100103717
330 Ga0075362_10000568
331 Ga0075367_10035103
332 Ga0075366_10002779
333 Ga0075366_10006953
334 Ga0075370_10000936
335 Ga0075370_10002600
336 Ga0075430_100017558
337 Ga0075429_100000492
338 Ga0099823_1042344
339 Ga0079104_1019349
340 Ga0105240_10017584
341 Ga0105237_10072902
342 Ga0105249_10027073
343 Ga0105239_10085302
344 Ga0157319_1000006
345 Ga0163162_10002098
346 Ga0163162_10098807
347 Ga0157375_10009268
348 Ga0182008_10001659
349 Ga0182008_10006658
350 Ga0182007_10002829
351 Ga0163161_10045245
352 Ga0213872_10000409
353 Ga0213872_10001066
354 Ga0213872_10002864
355 Ga0209435_100062
356 Ga0209674_100003
357 Ga0209563_100005
358 Ga0209563_100010
359 Ga0207427_100483
360 Ga0209258_100902
361 Ga0207425_1005960
362 Ga0209646_1000001
363 Ga0209646_1000062
364 Ga0209026_1000026
365 Ga0209026_1000224
366 Ga0209677_100026
367 Ga0209677_100200
368 Ga0209677_101111
369 Ga0209759_1000013
370 Ga0209759_1000640
371 Ga0209129_1005004
372 Ga0209565_1000246
373 Ga0209565_1007175
374 Ga0209673_1000043
375 Ga0209130_1000741
376 Ga0209675_1001031
377 Ga0209675_1018346
378 Ga0209676_1000004
379 Ga0209676_1000007
380 Ga0209676_1011137
381 Ga0209676_1019471
382 Ga0209025_1002489
383 Ga0209564_1000003
384 Ga0209564_1000285
385 Ga0209564_1000877
386 Ga0209758_1025496
387 Ga0209050_1000002
388 Ga0209050_1000003
389 Ga0209050_1012309
390 Ga0209256_1000001
391 Ga0209256_1000011
392 Ga0209256_1000053
393 Ga0209256_1000873
394 Ga0207426_1001826
395 Ga0209051_1000002
396 Ga0209051_1000003
397 Ga0209051_1002172
398 Ga0209051_1002619
399 Ga0209051_1002742
400 Ga0209051_1012844
401 Ga0209051_1023761
402 Ga0209257_1000002
403 Ga0209257_1000020
404 Ga0209257_1000032
405 Ga0209257_1001305
406 Ga0209257_1007837
407 Ga0207645_10005142
408 Ga0207695_10004435
409 Ga0207660_10116539
410 Ga0207657_10005484
411 Ga0207709_10025109
412 Ga0207691_10007675
413 Ga0207689_10021771
414 Ga0207702_10001022
415 Ga0207641_10015698
416 Ga0207648_10016073
417 Ga0207674_10025473
418 Ga0207698_10015532
419 Ga0209966_1000029
420 Ga0307515_10000195
421 Ga0307515_10019122
422 Ga0265328_10006028
423 Ga0265327_10000425
424 Ga0265327_10032764
425 Ga0307513_10000054
426 Ga0307408_100012367
427 Ga0307514_10006387
428 Ga0307516_10001457
429 Ga0395899_0000012
430 Ga0395899_0002251
431 Ga0395899_0008511
432 Ga0395899_0051594
433 Ga0395900_0000378
434 Ga0395900_0022497
435 Ga0395898_0032889
436 Ga0395905_0001198
437 Ga0395905_0002276
438 Ga0395905_0010954
439 Ga0395901_0128679
440 Ga0436361_0240598
441 Ga0436361_0554943
442 Ga0439436_0000276
443 Ga0439447_005339
444 Ga0439461_0005576
445 Ga0439466_0000744
446 Ga0439466_0002226
447 Ga0439465_0000727
448 Ga0439433_0000352
449 Ga0439445_0001109
450 Ga0439432_001649
451 Ga0439449_0001933
452 Ga0439449_0005141
453 Ga0439452_004476
454 Ga0439457_001248
455 Ga0439462_0002062
456 Ga0450911_000383
457 Ga0450890_001837
458 Ga0439446_0001477
459 Ga0439434_0001345
460 Ga0450893_0008659
461 Ga0451577_0002513
462 Ga0451577_0010597
463 Ga0451577_0011718
464 Ga0451577_0016835
465 Ga0451577_0023586
466 Ga0466969_0008048
467 Ga0466972_0000201
468 Ga0466972_0006867
469 Ga0453683_0002946
470 Ga0466965_0000627
471 Ga0466965_0009197
472 Ga0466966_0010499
473 Ga0466966_0014463
474 Ga0466964_0008968
475 Ga0466960_0013423
476 Ga0466960_0039382
477 Ga0451576_0000862
478 Ga0451576_0088132
479 Ga0495590_0001273
480 Ga0495653_0006237
481 Ga0495583_0000210
482 Ga0495583_0003552
483 Ga0495606_0001127
484 Ga0495606_0002233
485 Ga0495616_0018175
486 Ga0495630_0063078
487 Ga0495631_0000366
488 Ga0495632_0000156
489 Ga0495648_0012590
490 Ga0495666_0012427
491 Ga0495652_0004029
492 Ga0495665_0001008
493 Ga0495587_0027289
494 Ga0495621_0030477
495 Ga0495622_0007805
496 Ga0495656_0000269
497 Ga0495625_0025123
498 Ga0495623_0044704
499 Ga0495649_0001379
500 Ga0495600_0004211
501 Ga0495600_0008466
502 Ga0495604_0003012
503 Ga0495686_0005793
504 Ga0495686_0013760
505 Ga0495593_0014460
506 Ga0495602_0038080
507 Ga0496102_0000058
508 Ga0496102_0014242
509 Ga0496103_0015274
510 Ga0496103_0072950
511 Ga0496104_0024905
512 Ga0496106_0019081
513 Ga0496107_0072003
514 Ga0496109_0020582
515 Ga0496110_0034648
516 Ga0496114_0009203
517 Ga0496118_0016484
518 Ga0496118_0095239
519 Ga0496121_0048310
520 Ga0496124_0013068
521 Ga0496124_0089109
522 Ga0496125_0010453
523 Ga0495678_001220
524 Ga0501198_000071
525 Ga0501222_000080
526 nmdc:mga03683_1801_c1
527 nmdc:mga03683_3299_c1
528 nmdc:mga0k408_18626_c1
529 nmdc:mga07m45_465_c1
530 Ga0500607_007084
531 Ga0500559_0002836
532 Ga0500559_0006297
533 Ga0500589_022759
534 Ga0500622_0008453
535 Ga0500636_0000052
536 Ga0500637_0005288
537 Ga0500625_001263
538 Ga0500645_019898
539 Ga0466962_0012506
540 2644253545
541 2644337538
542 2831867461
543 2881101164
544 2886851883

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

30

318

0.96

PF00005

ABC_tran

ABC transporter

411

560

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ghi-assembly1.cif.gz_A crystal structure of plasmodium yoelii multidrug resistance protein 2 0.96 333 581
2ghi-assembly4.cif.gz_D crystal structure of plasmodium yoelii multidrug resistance protein 2 0.9528 339 581
4q7l-assembly3.cif.gz_C structure of nbd288 of tm287/288 0.9461 343 584
4q7l-assembly1.cif.gz_A structure of nbd288 of tm287/288 0.9461 343 582
2ghi-assembly3.cif.gz_C crystal structure of plasmodium yoelii multidrug resistance protein 2 0.9406 333 581
ID Description Score Start End Superfamily
af_Q8T9W1_1574_1812_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9623 343 576 3.40.50.300
af_Q61102_466_725_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9621 338 583 3.40.50.300
af_Q19015_1020_1270_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9579 365 584 3.40.50.300
af_Q19015_398_655_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9579 373 583 1.20.1560.10
af_Q7K6A5_1228_1417_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9579 400 576 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A257Y822-F1-model_v4 ABC transporter domain-containing protein 0.9873 362 581 GO:0005524
GO:0016887
GO:0034040
AF-A0A3D3GPI7-F1-model_v4 ABC transporter domain-containing protein 0.9854 372 583 GO:0005524
GO:0016887
GO:0034040
AF-A0A0G2AFU2-F1-model_v4 Peptide-transporting atpase 0.983 376 583 GO:0005524
GO:0016887
GO:0034040
AF-A0A7W1UKJ8-F1-model_v4 ATP-binding cassette domain-containing protein 0.98 362 494 GO:0005524
GO:0016887
GO:0042626
AF-A0A7W3T926-F1-model_v4 ATP-binding cassette domain-containing protein 0.9789 364 577 GO:0005524
GO:0015421
GO:0016887

Map