F378980

General Info

Members Datasets Scaffolds Average Seq Length
273 148 273 386

Family's Representative Sequence

Representative Sequence 3300007788|Ga0099795_10026512|Ga0099795_100265121
Length 427
Sequence MEFYGNPIKFTNTNHQYYQFAKSTADLEHGSIGDNLMSDRVYIFDTTLRDGEQSPGCSMTVPEKLRMARKLVELGVDTLEAGFPIASEGEYEAVTAVSKEFPSAQVAALARCCTLDAERAAAALSHARRPRIHLVIATSEIHLKHKLKKTQQQVLDEAVAAVELARRHVDDVEFSAEDGARTEPEFLEKVSKAVVAAGARTVNIADTVGYATPKEYGALIGRIVRALGDRAIVSAHCHDDRGLAVANSLAACEAGARQIECTINGIGERAGNCSLEEIVMILKTRPDSYGYHTGVHTEHLYSASQLLSSIITFGPQPNKAIVGRNAFAHEAGIHQDGYLKEKTTYEIIDPRSVGVPEGKLVLGKHSGRHALGQRAKELGYDLTREELNDLYKRFTDVADHRKKGLMDEEIVSLIQTSREEALKVAAD

Samples

Sample ID Description Type Environment
1 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
71 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
72 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
86 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
87 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
88 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
89 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
90 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
112 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
118 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
126 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0.37
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.83
Rhizosphere 87.55
Stem 0
Stem Tuber 0
Unclassified 10.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0032354_1021672 3300003693 Bacteria 2629
2 Ga0070658_10150855 3300005327 Bacteria 1946
3 Ga0070683_100000025 3300005329 Bacteria 173339
4 Ga0070680_100151021 3300005336 Bacteria 1950
5 Ga0070689_100000004 3300005340 Bacteria 497771
6 Ga0070671_100070160 3300005355 Bacteria 2923
7 Ga0070659_100044919 3300005366 Bacteria 3461
8 Ga0070714_100098901 3300005435 Bacteria 2567
9 Ga0070713_100003976 3300005436 Bacteria 9834
10 Ga0070713_100009319 3300005436 Bacteria 7019
11 Ga0070663_100048190 3300005455 Bacteria 3020
12 Ga0070681_10007274 3300005458 Bacteria 10808
13 Ga0070681_10415941 3300005458 Bacteria 1256
14 Ga0070679_100002409 3300005530 Bacteria 16959
15 Ga0070684_100002424 3300005535 Bacteria 13757
16 Ga0068853_100007291 3300005539 Bacteria 8851
17 Ga0068853_100017292 3300005539 Bacteria 5953
18 Ga0070665_100073300 3300005548 Bacteria 3430
19 Ga0068855_100025233 3300005563 Bacteria 7116
20 Ga0068855_100044073 3300005563 Bacteria 5281
21 Ga0068855_100153842 3300005563 Bacteria 2614
22 Ga0070664_100202618 3300005564 Bacteria 1771
23 Ga0068857_100078849 3300005577 Bacteria 2940
24 Ga0068856_100037015 3300005614 Bacteria 4786
25 Ga0068856_100042717 3300005614 Bacteria 4460
26 Ga0068856_100257861 3300005614 Bacteria 1759
27 Ga0068852_100119497 3300005616 Bacteria 2410
28 Ga0068863_100027467 3300005841 Bacteria 5428
29 Ga0068860_100113075 3300005843 Bacteria 2596
30 Ga0070717_10020546 3300006028 Bacteria 5196
31 Ga0070717_10026891 3300006028 Bacteria 4595
32 Ga0068871_100090371 3300006358 Bacteria 2550
33 Ga0075430_100018234 3300006846 Bacteria 5974
34 Ga0099795_10026512 3300007788 Bacteria 1952
35 Ga0105240_10000900 3300009093 Bacteria 53037
36 Ga0105240_10001542 3300009093 Bacteria 39129
37 Ga0105240_10031355 3300009093 Bacteria 6895
38 Ga0105240_10204678 3300009093 Bacteria 2311
39 Ga0105240_10342505 3300009093 Bacteria 1698
40 Ga0114129_10248003 3300009147 Bacteria 2391
41 Ga0105248_10090051 3300009177 Bacteria 3454
42 Ga0105248_10109474 3300009177 Bacteria 3115
43 Ga0105248_10552826 3300009177 Bacteria 1299
44 Ga0105237_10000019 3300009545 Bacteria 234829
45 Ga0105237_10002953 3300009545 Bacteria 20583
46 Ga0105237_10014193 3300009545 Bacteria 8342
47 Ga0105238_10005505 3300009551 Bacteria 12505
48 Ga0105238_10007869 3300009551 Bacteria 10663
49 Ga0105238_10057738 3300009551 Bacteria 3891
50 Ga0105239_10040886 3300010375 Bacteria 5081
51 Ga0157373_10082727 3300013100 Bacteria 2262
52 Ga0157370_10016688 3300013104 Bacteria 7432
53 Ga0157370_10168889 3300013104 Bacteria 2034
54 Ga0157369_10011518 3300013105 Bacteria 10045
55 Ga0157369_10030931 3300013105 Bacteria 5900
56 Ga0157369_10055091 3300013105 Bacteria 4293
57 Ga0157369_10296943 3300013105 Bacteria 1681
58 Ga0157374_10011350 3300013296 Bacteria 7709
59 Ga0157372_10071835 3300013307 Bacteria 3899
60 Ga0157372_10168552 3300013307 Bacteria 2533
61 Ga0157375_10076579 3300013308 Bacteria 3373
62 Ga0157377_10141073 3300014745 Bacteria 1481
63 Ga0213872_10000206 3300021361 Bacteria 52479
64 Ga0213876_10005092 3300021384 Bacteria 7248
65 Ga0213876_10042152 3300021384 Unclassified 2412
66 Ga0213876_10080458 3300021384 Bacteria 1723
67 Ga0213875_10000044 3300021388 Bacteria 151004
68 Ga0213875_10001845 3300021388 Bacteria 13168
69 Ga0213875_10008712 3300021388 Bacteria 5177
70 Ga0213875_10027123 3300021388 Bacteria 2725
71 Ga0213875_10109564 3300021388 Bacteria 1289
72 Ga0213871_10000392 3300021441 Bacteria 5787
73 Ga0207705_10026397 3300025909 Bacteria 4142
74 Ga0207705_10056999 3300025909 Bacteria 2818
75 Ga0207707_10005775 3300025912 Bacteria 10818
76 Ga0207707_10145152 3300025912 Bacteria 2074
77 Ga0207707_10172498 3300025912 Bacteria 1890
78 Ga0207695_10001327 3300025913 Bacteria 41986
79 Ga0207695_10010422 3300025913 Bacteria 11371
80 Ga0207695_10022170 3300025913 Bacteria 7222
81 Ga0207695_10029893 3300025913 Bacteria 6010
82 Ga0207695_10295025 3300025913 Bacteria 1513
83 Ga0207671_10000308 3300025914 Bacteria 72156
84 Ga0207671_10011369 3300025914 Bacteria 7251
85 Ga0207671_10078402 3300025914 Bacteria 2474
86 Ga0207663_10029691 3300025916 Bacteria 3215
87 Ga0207660_10113759 3300025917 Bacteria 2040
88 Ga0207657_10046463 3300025919 Bacteria 3802
89 Ga0207652_10031759 3300025921 Bacteria 4435
90 Ga0207694_10011932 3300025924 Bacteria 6552
91 Ga0207687_10116953 3300025927 Bacteria 1988
92 Ga0207700_10016932 3300025928 Bacteria 4854
93 Ga0207700_10238256 3300025928 Bacteria 1550
94 Ga0207664_10013908 3300025929 Bacteria 5799
95 Ga0207664_10240732 3300025929 Bacteria 1576
96 Ga0207690_10053807 3300025932 Bacteria 2703
97 Ga0207690_10113342 3300025932 Bacteria 1957
98 Ga0207670_10000022 3300025936 Bacteria 145904
99 Ga0207711_10115097 3300025941 Bacteria 2396
100 Ga0207661_10000028 3300025944 Bacteria 173347
101 Ga0207667_10034374 3300025949 Bacteria 5444
102 Ga0207667_10057685 3300025949 Bacteria 4075
103 Ga0207667_10094315 3300025949 Bacteria 3090
104 Ga0207667_10159754 3300025949 Bacteria 2318
105 Ga0207651_10044972 3300025960 Bacteria 2959
106 Ga0207712_10082021 3300025961 Bacteria 2350
107 Ga0207639_10014974 3300026041 Bacteria 5464
108 Ga0207639_10048742 3300026041 Bacteria 3208
109 Ga0207702_10020315 3300026078 Bacteria 5501
110 Ga0207702_10025877 3300026078 Bacteria 4871
111 Ga0207702_10029390 3300026078 Bacteria 4572
112 Ga0207641_10075007 3300026088 Bacteria 2920
113 Ga0207676_10113268 3300026095 Bacteria 2274
114 Ga0207674_10141021 3300026116 Bacteria 2369
115 Ga0207683_10256155 3300026121 Bacteria 1597
116 Ga0268264_10225863 3300028381 Bacteria 1726
117 Ga0265334_10022521 3300028573 Bacteria 2566
118 Ga0265334_10048169 3300028573 Bacteria 1642
119 Ga0265318_10000191 3300028577 Bacteria 54256
120 Ga0265318_10000255 3300028577 Bacteria 46320
121 Ga0265323_10001356 3300028653 Bacteria 12106
122 Ga0265338_10073853 3300028800 Bacteria 2904
123 Ga0265330_10000021 3300031235 Bacteria 154495
124 Ga0265330_10002296 3300031235 Bacteria 10503
125 Ga0265332_10000733 3300031238 Bacteria 20429
126 Ga0265332_10004286 3300031238 Bacteria 6732
127 Ga0265328_10008474 3300031239 Bacteria 4236
128 Ga0265328_10016868 3300031239 Bacteria 2835
129 Ga0265320_10000178 3300031240 Bacteria 53806
130 Ga0265320_10000649 3300031240 Bacteria 26564
131 Ga0265320_10004056 3300031240 Bacteria 9625
132 Ga0265325_10077005 3300031241 Bacteria 1664
133 Ga0265329_10005052 3300031242 Bacteria 5385
134 Ga0265329_10009156 3300031242 Bacteria 3710
135 Ga0265339_10014184 3300031249 Bacteria 4809
136 Ga0265339_10068601 3300031249 Bacteria 1894
137 Ga0265331_10000077 3300031250 Bacteria 145529
138 Ga0265331_10000558 3300031250 Bacteria 33732
139 Ga0265316_10002994 3300031344 Bacteria 17273
140 Ga0265316_10007350 3300031344 Bacteria 10380
141 Ga0265316_10015611 3300031344 Bacteria 6630
142 Ga0265316_10045865 3300031344 Bacteria 3467
143 Ga0265316_10063835 3300031344 Bacteria 2854
144 Ga0265316_10064299 3300031344 Bacteria 2842
145 Ga0265316_10137044 3300031344 Bacteria 1841
146 Ga0265313_10000025 3300031595 Bacteria 136925
147 Ga0265313_10019525 3300031595 Bacteria 3766
148 Ga0265313_10069756 3300031595 Bacteria 1621
149 Ga0265314_10000092 3300031711 Bacteria 136898
150 Ga0265314_10003861 3300031711 Bacteria 14285
151 Ga0265314_10005038 3300031711 Bacteria 12038
152 Ga0265314_10011075 3300031711 Bacteria 7474
153 Ga0265342_10004693 3300031712 Bacteria 10641
154 Ga0265342_10020600 3300031712 Bacteria 4226
155 Ga0265342_10037983 3300031712 Bacteria 2934
156 Ga0265342_10052644 3300031712 Bacteria 2426
157 Ga0373926_0021117 3300035083 Bacteria 2253
158 Ga0373954_0006402 3300035118 Bacteria 5134
159 Ga0373956_0031572 3300035119 Bacteria 2322
160 Ga0373943_0030002 3300035170 Bacteria 2572
161 Ga0373946_0075281 3300035171 Bacteria 1467
162 Ga0373935_0011713 3300035692 Bacteria 5268
163 Ga0373935_0093576 3300035692 Bacteria 1971
164 Ga0373927_0001135 3300035695 Bacteria 20156
165 Ga0373927_0003397 3300035695 Bacteria 11451
166 Ga0373927_0004659 3300035695 Bacteria 9556
167 Ga0373947_0004041 3300035725 Bacteria 8627
168 Ga0373937_0014907 3300036401 Bacteria 6865
169 Ga0373937_0164976 3300036401 Bacteria 2077
170 Ga0373925_0000323 3300037068 Bacteria 50082
171 Ga0373925_0046967 3300037068 Bacteria 3212
172 Ga0436364_0073959 3300037853 Bacteria 8686
173 Ga0436364_0148896 3300037853 Bacteria 2155
174 Ga0436364_0157811 3300037853 Bacteria 430293
175 Ga0436364_0193037 3300037853 Bacteria 9726
176 Ga0436364_0426133 3300037853 Bacteria 9328
177 Ga0436364_0517172 3300037853 Bacteria 2889
178 Ga0436364_0532840 3300037853 Bacteria 3070
179 Ga0436364_0561365 3300037853 Bacteria 4144
180 Ga0436364_0745557 3300037853 Bacteria 199469
181 Ga0436364_0752019 3300037853 Bacteria 3228
182 Ga0436364_0891441 3300037853 Bacteria 6548
183 Ga0436364_0961923 3300037853 Bacteria 1414
184 Ga0436364_1085801 3300037853 Bacteria 9158
185 Ga0436364_1161212 3300037853 Bacteria 8372
186 Ga0436364_1228011 3300037853 Bacteria 3935
187 Ga0395901_0290256 3300038443 Bacteria 1698
188 Ga0436365_0291486 3300039437 Bacteria 3887
189 Ga0436365_0544129 3300039437 Bacteria 3396
190 Ga0436365_0695334 3300039437 Bacteria 5813
191 Ga0436365_1207887 3300039437 Bacteria 19641
192 Ga0436365_1284086 3300039437 Bacteria 3541
193 Ga0436365_1401564 3300039437 Bacteria 6347
194 Ga0436360_0203485 3300039438 Bacteria 42348
195 Ga0436361_0079738 3300039447 Bacteria 122121
196 Ga0436361_0562104 3300039447 Bacteria 1459
197 Ga0436362_0414667 3300039453 Bacteria 4796
198 Ga0451577_0008176 3300042876 Bacteria 10196
199 Ga0466963_0094272 3300044694 Bacteria 2042
200 Ga0453684_0387595 3300044712 Bacteria 1568
201 Ga0451576_0009967 3300045051 Bacteria 10959
202 Ga0451576_0032768 3300045051 Bacteria 5526
203 Ga0451576_0094403 3300045051 Bacteria 3111
204 Ga0451576_0298124 3300045051 Bacteria 1686
205 Ga0495592_0030123 3300046454 Bacteria 4104
206 Ga0495651_0013381 3300046462 Bacteria 6347
207 Ga0495651_0024578 3300046462 Bacteria 4686
208 Ga0495580_0000042 3300046472 Bacteria 70551
209 Ga0495580_0004289 3300046472 Bacteria 11989
210 Ga0495580_0007039 3300046472 Bacteria 9069
211 Ga0495580_0042570 3300046472 Bacteria 3235
212 Ga0495580_0056295 3300046472 Bacteria 2770
213 Ga0495580_0057860 3300046472 Bacteria 2728
214 Ga0495580_0181716 3300046472 Bacteria 1452
215 Ga0495662_0025330 3300046476 Bacteria 2864
216 Ga0495664_0027988 3300046477 Bacteria 3289
217 Ga0495594_0100047 3300046499 Bacteria 1631
218 Ga0495608_0074710 3300046511 Bacteria 2209
219 Ga0495608_0173605 3300046511 Bacteria 1366
220 Ga0495618_0040705 3300046514 Bacteria 2926
221 Ga0495628_0234422 3300046516 Bacteria 1375
222 Ga0495630_0134230 3300046517 Bacteria 1880
223 Ga0495652_0020162 3300046529 Bacteria 5926
224 Ga0495652_0067155 3300046529 Bacteria 3007
225 Ga0495665_0120806 3300046531 Bacteria 1372
226 Ga0495640_0076913 3300046533 Bacteria 2226
227 Ga0495645_0005340 3300046543 Bacteria 8804
228 Ga0495645_0010378 3300046543 Bacteria 6527
229 Ga0495667_0013358 3300046559 Bacteria 5558
230 Ga0495667_0055296 3300046559 Bacteria 2610
231 Ga0495634_0032208 3300046642 Bacteria 3606
232 Ga0495599_0005808 3300046678 Bacteria 7409
233 Ga0495599_0170290 3300046678 Bacteria 1344
234 Ga0495623_0034161 3300046679 Bacteria 3262
235 Ga0495613_0123209 3300046689 Bacteria 1860
236 Ga0495604_0068833 3300047317 Bacteria 2685
237 Ga0495604_0175036 3300047317 Bacteria 1505
238 Ga0495636_0076246 3300047318 Bacteria 1438
239 Ga0495674_0001641 3300047319 Bacteria 21990
240 Ga0495674_0008854 3300047319 Bacteria 9576
241 Ga0495674_0204452 3300047319 Bacteria 1637
242 Ga0495674_0257414 3300047319 Bacteria 1435
243 Ga0495680_0079856 3300047322 Bacteria 2473
244 Ga0495680_0083611 3300047322 Bacteria 2406
245 Ga0495675_0028833 3300047444 Bacteria 3538
246 Ga0495675_0089431 3300047444 Bacteria 1933
247 Ga0495684_0000267 3300047471 Bacteria 41592
248 Ga0495684_0091282 3300047471 Bacteria 2307
249 Ga0495684_0108210 3300047471 Bacteria 2099
250 Ga0495684_0154990 3300047471 Bacteria 1711
251 Ga0495602_0026005 3300048088 Bacteria 5654
252 Ga0495602_0296728 3300048088 Bacteria 1184
253 Ga0496109_0332660 3300048912 Bacteria 1434
254 Ga0496112_0041229 3300048915 Bacteria 4516
255 Ga0496114_0183698 3300048917 Bacteria 1827
256 Ga0496115_0019122 3300048918 Bacteria 5268
257 Ga0496115_0174058 3300048918 Bacteria 1780
258 Ga0501032_0098210 3300049569 Bacteria 1941
259 Ga0501038_0069394 3300049574 Bacteria 2994
260 Ga0501046_0038801 3300049580 Bacteria 3820
261 Ga0501047_0012230 3300049581 Bacteria 8128
262 Ga0501047_0049370 3300049581 Bacteria 4063
263 Ga0501070_0013978 3300049586 Bacteria 6759
264 Ga0501073_0062653 3300049589 Bacteria 2594
265 Ga0501074_0095318 3300049590 Bacteria 2131
266 Ga0501035_0025545 3300049822 Bacteria 5414
267 Ga0501044_0000814 3300049823 Bacteria 37495
268 Ga0501044_0017675 3300049823 Bacteria 7648
269 Ga0501044_0177993 3300049823 Bacteria 2095
270 nmdc:mga0qj67_46127_c1 3300050509 Bacteria 3440
271 nmdc:mga06r32_238549_c1 3300050510 Bacteria 1806
272 nmdc:mga08x19_6884_c1 3300050514 Bacteria 6750
273 Ga0501082_0005647 3300060353 Bacteria 10855

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048088 Ga0495602_0296728 Ga0495602_0296728_201_1169 298
2 3300060353 Ga0501082_0005647 Ga0501082_0005647_6325_7434 334
3 3300045051 Ga0451576_0094403 Ga0451576_0094403_1550_2626 335
4 3300005563 Ga0068855_100044073 Ga0068855_1000440733 336
5 3300005340 Ga0070689_100000004 Ga0070689_100000004389 338
6 3300025936 Ga0207670_10000022 Ga0207670_1000002219 338
7 3300005336 Ga0070680_100151021 Ga0070680_1001510212 339
8 3300005530 Ga0070679_100002409 Ga0070679_1000024095 339
9 3300009551 Ga0105238_10005505 Ga0105238_100055053 339
10 3300010375 Ga0105239_10040886 Ga0105239_100408863 339
11 3300025917 Ga0207660_10113759 Ga0207660_101137592 339
12 3300025924 Ga0207694_10011932 Ga0207694_100119322 339
13 3300031595 Ga0265313_10069756 Ga0265313_100697561 339
14 3300031712 Ga0265342_10052644 Ga0265342_100526443 339
15 3300031711 Ga0265314_10005038 Ga0265314_100050384 342
16 3300013296 Ga0157374_10011350 Ga0157374_100113505 343
17 3300028800 Ga0265338_10073853 Ga0265338_100738532 343
18 3300031240 Ga0265320_10000649 Ga0265320_100006499 343
19 3300031249 Ga0265339_10014184 Ga0265339_100141842 343
20 3300031344 Ga0265316_10002994 Ga0265316_100029943 343
21 3300048912 Ga0496109_0332660 Ga0496109_0332660_311_1414 343
22 3300048915 Ga0496112_0041229 Ga0496112_0041229_680_1783 343
23 3300049569 Ga0501032_0098210 Ga0501032_0098210_799_1899 343
24 3300005577 Ga0068857_100078849 Ga0068857_1000788493 344
25 3300005841 Ga0068863_100027467 Ga0068863_1000274672 344
26 3300009093 Ga0105240_10000900 Ga0105240_1000090013 344
27 3300009545 Ga0105237_10000019 Ga0105237_10000019196 344
28 3300025909 Ga0207705_10026397 Ga0207705_100263973 344
29 3300025912 Ga0207707_10145152 Ga0207707_101451522 344
30 3300025913 Ga0207695_10001327 Ga0207695_1000132724 344
31 3300025914 Ga0207671_10000308 Ga0207671_100003085 344
32 3300025921 Ga0207652_10031759 Ga0207652_100317593 344
33 3300025949 Ga0207667_10057685 Ga0207667_100576852 344
34 3300026116 Ga0207674_10141021 Ga0207674_101410213 344
35 3300026121 Ga0207683_10256155 Ga0207683_102561551 344
36 3300035118 Ga0373954_0006402 Ga0373954_0006402_1280_2383 344
37 3300035695 Ga0373927_0003397 Ga0373927_0003397_4487_5590 344
38 3300037068 Ga0373925_0046967 Ga0373925_0046967_863_1966 344
39 3300037853 Ga0436364_0961923 Ga0436364_0961923_230_1333 344
40 3300039438 Ga0436360_0203485 Ga0436360_0203485_17050_18153 344
41 3300044694 Ga0466963_0094272 Ga0466963_0094272_641_1744 344
42 3300046462 Ga0495651_0013381 Ga0495651_0013381_536_1648 344
43 3300046472 Ga0495580_0000042 Ga0495580_0000042_45823_46935 344
44 3300046472 Ga0495580_0004289 Ga0495580_0004289_9379_10482 344
45 3300046511 Ga0495608_0074710 Ga0495608_0074710_404_1516 344
46 3300046529 Ga0495652_0067155 Ga0495652_0067155_244_1356 344
47 3300046559 Ga0495667_0013358 Ga0495667_0013358_288_1400 344
48 3300046679 Ga0495623_0034161 Ga0495623_0034161_342_1454 344
49 3300047322 Ga0495680_0079856 Ga0495680_0079856_312_1421 344
50 3300047444 Ga0495675_0028833 Ga0495675_0028833_1607_2719 344
51 3300047471 Ga0495684_0000267 Ga0495684_0000267_2911_4023 344
52 3300048088 Ga0495602_0026005 Ga0495602_0026005_4056_5168 344
53 3300050510 nmdc:mga06r32_238549_c1 nmdc:mga06r32_238549_c1_663_1769 344
54 3300005436 Ga0070713_100009319 Ga0070713_1000093194 345
55 3300013100 Ga0157373_10082727 Ga0157373_100827272 345
56 3300013105 Ga0157369_10030931 Ga0157369_100309313 345
57 3300013307 Ga0157372_10168552 Ga0157372_101685522 345
58 3300048917 Ga0496114_0183698 Ga0496114_0183698_38_1147 345
59 3300048918 Ga0496115_0019122 Ga0496115_0019122_4033_5142 345
60 3300039437 Ga0436365_1207887 Ga0436365_1207887_8278_9396 346
61 3300031344 Ga0265316_10045865 Ga0265316_100458651 347
62 3300035692 Ga0373935_0011713 Ga0373935_0011713_3396_4514 347
63 3300037853 Ga0436364_0148896 Ga0436364_0148896_50_1174 347
64 3300037853 Ga0436364_0157811 Ga0436364_0157811_308437_309573 347
65 3300037853 Ga0436364_0426133 Ga0436364_0426133_508_1629 347
66 3300037853 Ga0436364_0561365 Ga0436364_0561365_2136_3263 347
67 3300037853 Ga0436364_0891441 Ga0436364_0891441_5182_6312 347
68 3300037853 Ga0436364_1228011 Ga0436364_1228011_2539_3669 347
69 3300039437 Ga0436365_0544129 Ga0436365_0544129_574_1704 347
70 3300039437 Ga0436365_0695334 Ga0436365_0695334_3947_5077 347
71 3300039437 Ga0436365_1284086 Ga0436365_1284086_1014_2135 347
72 3300039437 Ga0436365_1401564 Ga0436365_1401564_1630_2760 347
73 3300039447 Ga0436361_0562104 Ga0436361_0562104_244_1371 347
74 3300039453 Ga0436362_0414667 Ga0436362_0414667_287_1417 347
75 3300044712 Ga0453684_0387595 Ga0453684_0387595_288_1409 347
76 3300046472 Ga0495580_0056295 Ga0495580_0056295_1444_2562 347
77 3300025929 Ga0207664_10240732 Ga0207664_102407322 350
78 3300047318 Ga0495636_0076246 Ga0495636_0076246_44_1228 352
79 3300046511 Ga0495608_0173605 Ga0495608_0173605_22_1164 355
80 3300046533 Ga0495640_0076913 Ga0495640_0076913_870_2012 355
81 3300047317 Ga0495604_0175036 Ga0495604_0175036_41_1183 355
82 3300035083 Ga0373926_0021117 Ga0373926_0021117_280_1455 358
83 3300035170 Ga0373943_0030002 Ga0373943_0030002_629_1804 358
84 3300035171 Ga0373946_0075281 Ga0373946_0075281_138_1313 358
85 3300035692 Ga0373935_0093576 Ga0373935_0093576_672_1847 358
86 3300035695 Ga0373927_0004659 Ga0373927_0004659_773_1948 358
87 3300035725 Ga0373947_0004041 Ga0373947_0004041_6287_7462 358
88 3300037068 Ga0373925_0000323 Ga0373925_0000323_14359_15534 358
89 3300009177 Ga0105248_10552826 Ga0105248_105528261 360
90 3300005435 Ga0070714_100098901 Ga0070714_1000989012 363
91 3300006028 Ga0070717_10026891 Ga0070717_100268912 363
92 3300039447 Ga0436361_0079738 Ga0436361_0079738_20912_22072 363
93 3300005458 Ga0070681_10415941 Ga0070681_104159411 364
94 3300005616 Ga0068852_100119497 Ga0068852_1001194972 364
95 3300025949 Ga0207667_10094315 Ga0207667_100943153 364
96 3300031711 Ga0265314_10011075 Ga0265314_100110753 364
97 3300038443 Ga0395901_0290256 Ga0395901_0290256_116_1279 364
98 3300049581 Ga0501047_0012230 Ga0501047_0012230_3708_4871 364
99 3300049590 Ga0501074_0095318 Ga0501074_0095318_175_1338 364
100 3300049822 Ga0501035_0025545 Ga0501035_0025545_3764_4927 364
101 3300049823 Ga0501044_0000814 Ga0501044_0000814_8859_10022 364
102 3300049823 Ga0501044_0017675 Ga0501044_0017675_3069_4232 364
103 3300049823 Ga0501044_0177993 Ga0501044_0177993_393_1556 364
104 3300005327 Ga0070658_10150855 Ga0070658_101508552 365
105 3300005455 Ga0070663_100048190 Ga0070663_1000481902 365
106 3300009093 Ga0105240_10342505 Ga0105240_103425052 365
107 3300009545 Ga0105237_10014193 Ga0105237_100141938 365
108 3300009551 Ga0105238_10057738 Ga0105238_100577383 365
109 3300021384 Ga0213876_10080458 Ga0213876_100804582 365
110 3300021388 Ga0213875_10008712 Ga0213875_100087122 365
111 3300021441 Ga0213871_10000392 Ga0213871_100003923 365
112 3300025912 Ga0207707_10172498 Ga0207707_101724982 365
113 3300025913 Ga0207695_10029893 Ga0207695_100298931 365
114 3300025913 Ga0207695_10295025 Ga0207695_102950251 365
115 3300025914 Ga0207671_10011369 Ga0207671_100113693 365
116 3300026088 Ga0207641_10075007 Ga0207641_100750071 365
117 3300031344 Ga0265316_10063835 Ga0265316_100638352 365
118 3300031344 Ga0265316_10064299 Ga0265316_100642993 365
119 3300031712 Ga0265342_10020600 Ga0265342_100206002 365
120 3300035119 Ga0373956_0031572 Ga0373956_0031572_168_1331 365
121 3300035695 Ga0373927_0001135 Ga0373927_0001135_4857_6023 365
122 3300036401 Ga0373937_0014907 Ga0373937_0014907_3238_4401 365
123 3300037853 Ga0436364_0517172 Ga0436364_0517172_1265_2437 365
124 3300037853 Ga0436364_0532840 Ga0436364_0532840_486_1652 365
125 3300045051 Ga0451576_0298124 Ga0451576_0298124_161_1333 365
126 3300046472 Ga0495580_0007039 Ga0495580_0007039_3380_4543 365
127 3300046472 Ga0495580_0042570 Ga0495580_0042570_745_1917 365
128 3300046472 Ga0495580_0057860 Ga0495580_0057860_1151_2314 365
129 3300046516 Ga0495628_0234422 Ga0495628_0234422_132_1304 365
130 3300046543 Ga0495645_0010378 Ga0495645_0010378_3371_4543 365
131 3300050514 nmdc:mga08x19_6884_c1 nmdc:mga08x19_6884_c1_66_1232 365
132 3300005329 Ga0070683_100000025 Ga0070683_100000025111 366
133 3300005355 Ga0070671_100070160 Ga0070671_1000701602 366
134 3300005366 Ga0070659_100044919 Ga0070659_1000449192 366
135 3300005436 Ga0070713_100003976 Ga0070713_1000039766 366
136 3300005535 Ga0070684_100002424 Ga0070684_1000024249 366
137 3300005539 Ga0068853_100017292 Ga0068853_1000172926 366
138 3300005548 Ga0070665_100073300 Ga0070665_1000733003 366
139 3300005563 Ga0068855_100153842 Ga0068855_1001538423 366
140 3300005564 Ga0070664_100202618 Ga0070664_1002026182 366
141 3300005614 Ga0068856_100037015 Ga0068856_1000370153 366
142 3300005614 Ga0068856_100042717 Ga0068856_1000427173 366
143 3300006028 Ga0070717_10020546 Ga0070717_100205464 366
144 3300006358 Ga0068871_100090371 Ga0068871_1000903712 366
145 3300009093 Ga0105240_10001542 Ga0105240_1000154236 366
146 3300009093 Ga0105240_10031355 Ga0105240_100313557 366
147 3300009147 Ga0114129_10248003 Ga0114129_102480032 366
148 3300009177 Ga0105248_10109474 Ga0105248_101094742 366
149 3300009545 Ga0105237_10002953 Ga0105237_1000295314 366
150 3300013104 Ga0157370_10168889 Ga0157370_101688892 366
151 3300013105 Ga0157369_10296943 Ga0157369_102969432 366
152 3300013308 Ga0157375_10076579 Ga0157375_100765793 366
153 3300014745 Ga0157377_10141073 Ga0157377_101410731 366
154 3300021361 Ga0213872_10000206 Ga0213872_1000020630 366
155 3300021388 Ga0213875_10001845 Ga0213875_1000184510 366
156 3300021388 Ga0213875_10027123 Ga0213875_100271232 366
157 3300025909 Ga0207705_10056999 Ga0207705_100569993 366
158 3300025913 Ga0207695_10010422 Ga0207695_100104224 366
159 3300025916 Ga0207663_10029691 Ga0207663_100296912 366
160 3300025919 Ga0207657_10046463 Ga0207657_100464633 366
161 3300025927 Ga0207687_10116953 Ga0207687_101169532 366
162 3300025928 Ga0207700_10016932 Ga0207700_100169322 366
163 3300025929 Ga0207664_10013908 Ga0207664_100139083 366
164 3300025932 Ga0207690_10053807 Ga0207690_100538072 366
165 3300025932 Ga0207690_10113342 Ga0207690_101133421 366
166 3300025941 Ga0207711_10115097 Ga0207711_101150972 366
167 3300025944 Ga0207661_10000028 Ga0207661_1000002833 366
168 3300025949 Ga0207667_10159754 Ga0207667_101597541 366
169 3300025960 Ga0207651_10044972 Ga0207651_100449722 366
170 3300025961 Ga0207712_10082021 Ga0207712_100820212 366
171 3300026041 Ga0207639_10048742 Ga0207639_100487422 366
172 3300026078 Ga0207702_10020315 Ga0207702_100203153 366
173 3300026078 Ga0207702_10029390 Ga0207702_100293903 366
174 3300026095 Ga0207676_10113268 Ga0207676_101132682 366
175 3300031344 Ga0265316_10137044 Ga0265316_101370442 366
176 3300036401 Ga0373937_0164976 Ga0373937_0164976_28_1203 366
177 3300037853 Ga0436364_0073959 Ga0436364_0073959_7433_8608 366
178 3300037853 Ga0436364_0193037 Ga0436364_0193037_3339_4508 366
179 3300037853 Ga0436364_0752019 Ga0436364_0752019_1101_2273 366
180 3300037853 Ga0436364_1085801 Ga0436364_1085801_7040_8212 366
181 3300046454 Ga0495592_0030123 Ga0495592_0030123_727_1902 366
182 3300046462 Ga0495651_0024578 Ga0495651_0024578_2696_3871 366
183 3300046472 Ga0495580_0181716 Ga0495580_0181716_207_1382 366
184 3300046476 Ga0495662_0025330 Ga0495662_0025330_970_2145 366
185 3300046477 Ga0495664_0027988 Ga0495664_0027988_2065_3240 366
186 3300046499 Ga0495594_0100047 Ga0495594_0100047_360_1547 366
187 3300046514 Ga0495618_0040705 Ga0495618_0040705_182_1357 366
188 3300046517 Ga0495630_0134230 Ga0495630_0134230_651_1826 366
189 3300046529 Ga0495652_0020162 Ga0495652_0020162_2840_4015 366
190 3300046531 Ga0495665_0120806 Ga0495665_0120806_131_1306 366
191 3300046543 Ga0495645_0005340 Ga0495645_0005340_2579_3754 366
192 3300046559 Ga0495667_0055296 Ga0495667_0055296_1387_2562 366
193 3300046642 Ga0495634_0032208 Ga0495634_0032208_1713_2888 366
194 3300046678 Ga0495599_0005808 Ga0495599_0005808_5515_6690 366
195 3300046678 Ga0495599_0170290 Ga0495599_0170290_25_1200 366
196 3300046689 Ga0495613_0123209 Ga0495613_0123209_46_1221 366
197 3300047317 Ga0495604_0068833 Ga0495604_0068833_1015_2190 366
198 3300047319 Ga0495674_0001641 Ga0495674_0001641_12240_13415 366
199 3300047319 Ga0495674_0008854 Ga0495674_0008854_7428_8603 366
200 3300047319 Ga0495674_0204452 Ga0495674_0204452_50_1225 366
201 3300047319 Ga0495674_0257414 Ga0495674_0257414_54_1241 366
202 3300047322 Ga0495680_0083611 Ga0495680_0083611_413_1588 366
203 3300047444 Ga0495675_0089431 Ga0495675_0089431_163_1338 366
204 3300047471 Ga0495684_0091282 Ga0495684_0091282_1012_2187 366
205 3300047471 Ga0495684_0108210 Ga0495684_0108210_441_1616 366
206 3300047471 Ga0495684_0154990 Ga0495684_0154990_518_1693 366
207 3300005458 Ga0070681_10007274 Ga0070681_100072747 367
208 3300021384 Ga0213876_10005092 Ga0213876_100050923 367
209 3300021388 Ga0213875_10000044 Ga0213875_1000004422 367
210 3300025912 Ga0207707_10005775 Ga0207707_100057753 367
211 3300025928 Ga0207700_10238256 Ga0207700_102382561 367
212 3300037853 Ga0436364_0745557 Ga0436364_0745557_17233_18405 367
213 3300005843 Ga0068860_100113075 Ga0068860_1001130752 368
214 3300021384 Ga0213876_10042152 Ga0213876_100421522 368
215 3300021388 Ga0213875_10109564 Ga0213875_101095641 368
216 3300028653 Ga0265323_10001356 Ga0265323_100013567 368
217 3300045051 Ga0451576_0032768 Ga0451576_0032768_1462_2643 368
218 3300005563 Ga0068855_100025233 Ga0068855_1000252334 369
219 3300006846 Ga0075430_100018234 Ga0075430_1000182342 369
220 3300009093 Ga0105240_10204678 Ga0105240_102046782 369
221 3300009177 Ga0105248_10090051 Ga0105248_100900514 369
222 3300013104 Ga0157370_10016688 Ga0157370_100166883 369
223 3300013105 Ga0157369_10011518 Ga0157369_100115182 369
224 3300013307 Ga0157372_10071835 Ga0157372_100718353 369
225 3300025949 Ga0207667_10034374 Ga0207667_100343742 369
226 3300042876 Ga0451577_0008176 Ga0451577_0008176_8244_9473 369
227 3300048918 Ga0496115_0174058 Ga0496115_0174058_541_1731 369
228 3300050509 nmdc:mga0qj67_46127_c1 nmdc:mga0qj67_46127_c1_126_1307 369
229 3300005539 Ga0068853_100007291 Ga0068853_1000072913 370
230 3300005614 Ga0068856_100257861 Ga0068856_1002578612 370
231 3300009551 Ga0105238_10007869 Ga0105238_1000786911 370
232 3300025913 Ga0207695_10022170 Ga0207695_100221701 370
233 3300025914 Ga0207671_10078402 Ga0207671_100784022 370
234 3300026041 Ga0207639_10014974 Ga0207639_100149745 370
235 3300026078 Ga0207702_10025877 Ga0207702_100258772 370
236 3300028381 Ga0268264_10225863 Ga0268264_102258632 370
237 3300028573 Ga0265334_10022521 Ga0265334_100225212 370
238 3300028577 Ga0265318_10000191 Ga0265318_1000019134 370
239 3300031235 Ga0265330_10000021 Ga0265330_100000213 370
240 3300031238 Ga0265332_10000733 Ga0265332_100007337 370
241 3300031239 Ga0265328_10016868 Ga0265328_100168683 370
242 3300031240 Ga0265320_10000178 Ga0265320_1000017826 370
243 3300031242 Ga0265329_10009156 Ga0265329_100091563 370
244 3300031250 Ga0265331_10000077 Ga0265331_1000007734 370
245 3300031595 Ga0265313_10000025 Ga0265313_1000002583 370
246 3300031595 Ga0265313_10019525 Ga0265313_100195254 370
247 3300031711 Ga0265314_10000092 Ga0265314_1000009226 370
248 3300031712 Ga0265342_10037983 Ga0265342_100379833 370
249 3300031241 Ga0265325_10077005 Ga0265325_100770051 372
250 3300031344 Ga0265316_10015611 Ga0265316_100156114 372
251 3300049574 Ga0501038_0069394 Ga0501038_0069394_1362_2591 376
252 3300049580 Ga0501046_0038801 Ga0501046_0038801_1996_3225 376
253 3300049581 Ga0501047_0049370 Ga0501047_0049370_2108_3337 376
254 3300049586 Ga0501070_0013978 Ga0501070_0013978_3388_4617 376
255 3300049589 Ga0501073_0062653 Ga0501073_0062653_1145_2374 376
256 3300007788 Ga0099795_10026512 Ga0099795_100265121 377
257 3300013105 Ga0157369_10055091 Ga0157369_100550913 377
258 3300028573 Ga0265334_10048169 Ga0265334_100481692 377
259 3300028577 Ga0265318_10000255 Ga0265318_100002553 377
260 3300031235 Ga0265330_10002296 Ga0265330_100022963 377
261 3300031238 Ga0265332_10004286 Ga0265332_100042862 377
262 3300031239 Ga0265328_10008474 Ga0265328_100084744 377
263 3300031240 Ga0265320_10004056 Ga0265320_100040562 377
264 3300031242 Ga0265329_10005052 Ga0265329_100050523 377
265 3300031249 Ga0265339_10068601 Ga0265339_100686012 377
266 3300031250 Ga0265331_10000558 Ga0265331_100005583 377
267 3300031344 Ga0265316_10007350 Ga0265316_100073503 377
268 3300031711 Ga0265314_10003861 Ga0265314_100038613 377
269 3300031712 Ga0265342_10004693 Ga0265342_100046933 377
270 3300037853 Ga0436364_1161212 Ga0436364_1161212_6474_7697 377
271 3300039437 Ga0436365_0291486 Ga0436365_0291486_1712_2926 377
272 3300045051 Ga0451576_0009967 Ga0451576_0009967_8081_9346 379
273 3300003693 Ga0032354_1021672 Ga0032354_10216722 384

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00682

HMGL-like

HMGL-like

40

307

0.99

PF22617

HCS_D2

Homocitrate synthase post-HMGL domain-like

321

402

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ewb-assembly1.cif.gz_X-2 crystal structure of n-terminal domain of putative 2-isopropylmalate synthase from listeria monocytogenes 0.9442 19 267
3eeg-assembly1.cif.gz_B crystal structure of a 2-isopropylmalate synthase from cytophaga hutchinsonii 0.9291 19 271
3eeg-assembly1.cif.gz_A crystal structure of a 2-isopropylmalate synthase from cytophaga hutchinsonii 0.9002 19 268
3rmj-assembly1.cif.gz_B crystal structure of truncated alpha-isopropylmalate synthase from neisseria meningitidis 0.8749 18 314
3rmj-assembly1.cif.gz_A crystal structure of truncated alpha-isopropylmalate synthase from neisseria meningitidis 0.8729 18 314
ID Description Score Start End Superfamily
af_I1NJA3_77_365_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.958 17 268 3.20.20.70
af_Q57926_26_296_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9324 20 270 3.20.20.70
3ewbX00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.932 19 267 3.20.20.70
4ov9A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9284 17 271 3.20.20.70
3eegB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9059 19 268 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A379ALI8-F1-model_v4 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) 0.9668 41 225 GO:0003852
GO:0005829
GO:0009098
AF-A0A3C1BQ21-F1-model_v4 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) 0.9656 90 228 GO:0003852
GO:0009098
AF-A0A7Y1X475-F1-model_v4 deleted 0.9631 96 184
AF-A0A356E3S8-F1-model_v4 2-isopropylmalate synthase (EC 2.3.3.13) 0.9619 19 250 GO:0003852
GO:0009098
AF-A0A2E1CNT7-F1-model_v4 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) 0.961 15 264 GO:0003852
GO:0005829
GO:0009098

Feature Viewer

pLDDT pTM Quality
80.29 0.8 High
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Predicted Structure (AlphaFold2)

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