F379142

General Info

Members Datasets Scaffolds Average Seq Length
273 192 546 390

Family's Representative Sequence

Representative Sequence 3300035172|Ga0373955_0018829|Ga0373955_0018829_1017_2279
Length 420
Sequence MSETGTHRTRDPTQLDARPWLPRQPAAMDFRPTPAEERFRREVHDWLMANLPEGWGTPGYHKPSEPEEKVAFGRSWQRKLSEGGWAGLHWPREYGGRGATPLEQFLFAEEYTRVGAPPMIDIGVGPGLVGPTLIHHGTEEQKRRFLPRILTGDDIWCQGFSEPNAGSDLANCRTRADLDGDVFRVTGQKIWTSYARFADWCILVVRTDFQAPKHRGLSFLLVDMKSPGITIRPLVEMTGVAWFNEVFFDDVRVPRENMVGRLNDGWTIAITTLAHERGGSAPHARIAGELAEVLALARSRDGVTRDPRWRQRLAQSYIETEIVRFVAYKQVSDLMRTGQPGPEGSYLKLLWSETDMRMKAAAIDLEGPYALVERGDPNAIDGGRWQYEYLWSRAASIYAGTSEVQRNIIAQRVLGLPRGQ

Samples

Sample ID Description Type Environment
1 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
68 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
101 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
106 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
107 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
108 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
109 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
110 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
111 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
112 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
115 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
116 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
125 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
126 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
127 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
130 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
131 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
138 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
142 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
143 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
144 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
145 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
163 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
178 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
180 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
181 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 2643221683 Variovorax sp. Root473 Isolate Unclassified
186 2738541277 Variovorax sp. GV051 Isolate Unclassified
187 2738541307 Variovorax sp. GV008 Isolate Unclassified
188 2738543019 Variovorax sp. GV040 Isolate Unclassified
189 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
190 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
191 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
192 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.7
Metatranscriptomes 0.37
Isolates 2.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.93
Nodule 0
Rhizoplane 1.47
Rhizosphere 84.25
Stem 0
Stem Tuber 0
Unclassified 0.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373955_0018829 3300035172 Bacteria 3442
2 JGI25406J46586_10015087 3300003203 Unclassified 3267
3 Ga0058860_10024956 3300004801 Bacteria 3648
4 Ga0070690_100101466 3300005330 Bacteria 1908
5 Ga0070670_100000797 3300005331 Bacteria 24587
6 Ga0070670_100049998 3300005331 Bacteria 3593
7 Ga0070677_10000853 3300005333 Bacteria 10037
8 Ga0070666_10001004 3300005335 Bacteria 17255
9 Ga0070666_10021227 3300005335 Bacteria 4207
10 Ga0070666_10138068 3300005335 Bacteria 1697
11 Ga0070661_100131494 3300005344 Bacteria 1880
12 Ga0070668_100014316 3300005347 Bacteria 5927
13 Ga0070669_100026023 3300005353 Bacteria 4208
14 Ga0070669_100097897 3300005353 Bacteria 2209
15 Ga0070675_100000275 3300005354 Bacteria 34094
16 Ga0070675_100127507 3300005354 Bacteria 2166
17 Ga0070671_100030364 3300005355 Bacteria 4460
18 Ga0070674_100000585 3300005356 Bacteria 18427
19 Ga0070673_100004206 3300005364 Bacteria 9077
20 Ga0070667_100007836 3300005367 Bacteria 8860
21 Ga0070667_100040486 3300005367 Bacteria 3908
22 Ga0070667_100149498 3300005367 Bacteria 2051
23 Ga0070713_100182751 3300005436 Bacteria 1885
24 Ga0070701_10048522 3300005438 Bacteria 2191
25 Ga0070700_100034438 3300005441 Bacteria 3059
26 Ga0070708_100233015 3300005445 Bacteria 1728
27 Ga0070678_100004107 3300005456 Bacteria 8200
28 Ga0068867_100000334 3300005459 Bacteria 31176
29 Ga0068867_100024871 3300005459 Bacteria 4294
30 Ga0070707_100085615 3300005468 Bacteria 3047
31 Ga0070707_100090040 3300005468 Bacteria 2970
32 Ga0070707_100113003 3300005468 Bacteria 2635
33 Ga0070698_100070252 3300005471 Bacteria 3514
34 Ga0070699_100001353 3300005518 Bacteria 22599
35 Ga0070697_100058924 3300005536 Bacteria 3125
36 Ga0070697_100173623 3300005536 Bacteria 1825
37 Ga0070697_100173701 3300005536 Bacteria 1825
38 Ga0068853_100078641 3300005539 Bacteria 2883
39 Ga0070672_100000355 3300005543 Bacteria 26388
40 Ga0070672_100203201 3300005543 Bacteria 1657
41 Ga0070665_100002321 3300005548 Bacteria 21123
42 Ga0070704_100021916 3300005549 Bacteria 4150
43 Ga0068855_100000337 3300005563 Bacteria 58374
44 Ga0068855_100017776 3300005563 Bacteria 8548
45 Ga0068855_100055270 3300005563 Bacteria 4664
46 Ga0068855_100095180 3300005563 Bacteria 3433
47 Ga0068855_100420362 3300005563 Bacteria 1462
48 Ga0070664_100023037 3300005564 Bacteria 5139
49 Ga0068856_100433222 3300005614 Bacteria 1335
50 Ga0068852_100000843 3300005616 Bacteria 20336
51 Ga0068859_100265014 3300005617 Bacteria 1810
52 Ga0068864_100025176 3300005618 Bacteria 5010
53 Ga0068870_10013633 3300005840 Bacteria 3825
54 Ga0068863_100140156 3300005841 Bacteria 2311
55 Ga0068858_100290892 3300005842 Bacteria 1557
56 Ga0068858_100326584 3300005842 Bacteria 1467
57 Ga0068860_100013987 3300005843 Bacteria 7870
58 Ga0068862_100015961 3300005844 Bacteria 6243
59 Ga0068862_100031279 3300005844 Bacteria 4491
60 Ga0081455_10002376 3300005937 Bacteria 22485
61 Ga0081455_10006223 3300005937 Bacteria 12859
62 Ga0081538_10000105 3300005981 Bacteria 83102
63 Ga0081538_10010738 3300005981 Bacteria 7490
64 Ga0081538_10018212 3300005981 Bacteria 5288
65 Ga0081538_10065299 3300005981 Bacteria 2050
66 Ga0081539_10002359 3300005985 Bacteria 27116
67 Ga0081539_10013347 3300005985 Bacteria 6195
68 Ga0075362_10003522 3300006177 Bacteria 5492
69 Ga0068871_100058706 3300006358 Bacteria 3133
70 Ga0075428_100060337 3300006844 Bacteria 4153
71 Ga0075431_100114650 3300006847 Bacteria 2782
72 Ga0075431_100212482 3300006847 Unclassified 1976
73 Ga0075434_100243840 3300006871 Bacteria 1817
74 Ga0075434_100261876 3300006871 Bacteria 1748
75 Ga0075434_100277727 3300006871 Bacteria 1695
76 Ga0075436_100105162 3300006914 Bacteria 1968
77 Ga0097620_100265001 3300006931 Bacteria 1810
78 Ga0105240_10000320 3300009093 Bacteria 91422
79 Ga0105240_10027176 3300009093 Bacteria 7497
80 Ga0105240_10133517 3300009093 Bacteria 2974
81 Ga0111539_10110265 3300009094 Bacteria 3229
82 Ga0114129_10142881 3300009147 Bacteria 3279
83 Ga0114129_10263524 3300009147 Bacteria 2308
84 Ga0105248_10023705 3300009177 Bacteria 6820
85 Ga0105248_10244089 3300009177 Bacteria 2022
86 Ga0105237_10015484 3300009545 Bacteria 7936
87 Ga0105237_10080504 3300009545 Bacteria 3247
88 Ga0105238_10037687 3300009551 Bacteria 4914
89 Ga0105249_10031663 3300009553 Bacteria 4784
90 Ga0105246_10164380 3300011119 Bacteria 1694
91 Ga0157373_10034506 3300013100 Bacteria 3633
92 Ga0157369_10034804 3300013105 Bacteria 5525
93 Ga0157378_10027489 3300013297 Bacteria 5020
94 Ga0157378_10070191 3300013297 Bacteria 3145
95 Ga0163162_10060253 3300013306 Bacteria 3830
96 Ga0163162_10081996 3300013306 Bacteria 3297
97 Ga0157372_10071158 3300013307 Bacteria 3916
98 Ga0163163_10143476 3300014325 Bacteria 2431
99 Ga0157379_10057053 3300014968 Bacteria 3490
100 Ga0163161_10030385 3300017792 Bacteria 3845
101 Ga0163161_10031753 3300017792 Bacteria 3765
102 Ga0163161_10091833 3300017792 Bacteria 2247
103 Ga0213875_10001219 3300021388 Bacteria 17414
104 Ga0209675_1001296 3300025291 Bacteria 14851
105 Ga0209675_1004016 3300025291 Bacteria 6711
106 Ga0209025_1000049 3300025294 Bacteria 333459
107 Ga0209050_1002587 3300025298 Bacteria 15002
108 Ga0207682_10004128 3300025893 Bacteria 6154
109 Ga0207688_10013947 3300025901 Bacteria 4368
110 Ga0207680_10012626 3300025903 Bacteria 4309
111 Ga0207685_10069502 3300025905 Bacteria 1422
112 Ga0207695_10000227 3300025913 Bacteria 150546
113 Ga0207695_10015737 3300025913 Bacteria 8894
114 Ga0207671_10017969 3300025914 Bacteria 5440
115 Ga0207646_10043224 3300025922 Bacteria 4047
116 Ga0207646_10107345 3300025922 Bacteria 2505
117 Ga0207681_10020919 3300025923 Bacteria 4152
118 Ga0207681_10070892 3300025923 Bacteria 2429
119 Ga0207694_10000005 3300025924 Bacteria 823704
120 Ga0207650_10000832 3300025925 Bacteria 23614
121 Ga0207650_10001092 3300025925 Bacteria 20048
122 Ga0207659_10000184 3300025926 Bacteria 37154
123 Ga0207659_10095843 3300025926 Bacteria 2226
124 Ga0207644_10000942 3300025931 Bacteria 18539
125 Ga0207670_10064828 3300025936 Bacteria 2506
126 Ga0207669_10001477 3300025937 Bacteria 10041
127 Ga0207691_10001564 3300025940 Bacteria 22724
128 Ga0207691_10239255 3300025940 Bacteria 1570
129 Ga0207711_10215584 3300025941 Bacteria 1754
130 Ga0207667_10000011 3300025949 Bacteria 447785
131 Ga0207667_10026326 3300025949 Bacteria 6358
132 Ga0207667_10125595 3300025949 Bacteria 2643
133 Ga0207651_10000894 3300025960 Bacteria 13084
134 Ga0207668_10028711 3300025972 Bacteria 3640
135 Ga0207658_10006362 3300025986 Bacteria 8066
136 Ga0207658_10124086 3300025986 Bacteria 2064
137 Ga0207703_10358695 3300026035 Bacteria 1344
138 Ga0207678_10500159 3300026067 Bacteria 1059
139 Ga0207708_10035429 3300026075 Bacteria 3798
140 Ga0207702_10390965 3300026078 Bacteria 1339
141 Ga0207641_10102479 3300026088 Bacteria 2524
142 Ga0207648_10003880 3300026089 Bacteria 15601
143 Ga0207674_10158969 3300026116 Bacteria 2215
144 Ga0207675_100022656 3300026118 Bacteria 5846
145 Ga0207683_10012674 3300026121 Bacteria 7190
146 Ga0265354_1000107 3300028016 Bacteria 14572
147 Ga0265356_1002027 3300028017 Bacteria 2781
148 Ga0268266_10006298 3300028379 Bacteria 10878
149 Ga0268266_10347044 3300028379 Bacteria 1394
150 Ga0268265_10007226 3300028380 Bacteria 7504
151 Ga0268265_10069856 3300028380 Bacteria 2729
152 Ga0268264_10009556 3300028381 Bacteria 8031
153 Ga0268264_10040415 3300028381 Bacteria 3854
154 Ga0307517_10055302 3300028786 Bacteria 3900
155 Ga0265332_10000111 3300031238 Bacteria 69906
156 Ga0265332_10000143 3300031238 Bacteria 58100
157 Ga0265329_10005732 3300031242 Bacteria 4994
158 Ga0265329_10008540 3300031242 Bacteria 3877
159 Ga0265329_10015709 3300031242 Bacteria 2639
160 Ga0265331_10000095 3300031250 Bacteria 121876
161 Ga0265331_10000119 3300031250 Bacteria 103745
162 Ga0265316_10000063 3300031344 Bacteria 113592
163 Ga0265314_10000194 3300031711 Bacteria 90562
164 Ga0265314_10001570 3300031711 Bacteria 25115
165 Ga0265342_10001051 3300031712 Bacteria 26985
166 Ga0265342_10016668 3300031712 Bacteria 4794
167 Ga0307516_10016574 3300031730 Bacteria 7704
168 Ga0307412_10004692 3300031911 Bacteria 7626
169 Ga0373923_0022554 3300035111 Bacteria 2470
170 Ga0373953_0019433 3300035117 Bacteria 2527
171 Ga0373956_0018382 3300035119 Bacteria 2959
172 Ga0373927_0051023 3300035695 Bacteria 2675
173 Ga0373927_0063715 3300035695 Bacteria 2384
174 Ga0373933_0010765 3300035724 Bacteria 5020
175 Ga0373933_0152805 3300035724 Bacteria 1462
176 Ga0373947_0063640 3300035725 Bacteria 2248
177 Ga0373937_0026048 3300036401 Bacteria 5283
178 Ga0395905_0000389 3300037471 Bacteria 62338
179 Ga0395901_0030054 3300038443 Bacteria 5597
180 Ga0436365_0061299 3300039437 Bacteria 1526
181 Ga0436365_0891944 3300039437 Bacteria 3982
182 Ga0436365_1143192 3300039437 Bacteria 1599
183 Ga0439450_001198 3300042008 Bacteria 3725
184 Ga0439451_003594 3300042009 Bacteria 3139
185 Ga0450911_000036 3300042115 Bacteria 60797
186 Ga0495651_0049906 3300046462 Bacteria 3230
187 Ga0495634_0005536 3300046642 Bacteria 9695
188 Ga0495635_0077270 3300046663 Bacteria 2281
189 Ga0495599_0041755 3300046678 Bacteria 2879
190 Ga0495613_0000737 3300046689 Bacteria 25668
191 Ga0495600_0066266 3300046809 Bacteria 2361
192 Ga0495674_0015445 3300047319 Bacteria 7136
193 Ga0496101_0008489 3300048904 Bacteria 6713
194 Ga0496104_0167050 3300048907 Bacteria 2110
195 Ga0496108_0000875 3300048911 Bacteria 23492
196 Ga0496110_0062177 3300048913 Bacteria 3297
197 Ga0496116_0030567 3300048919 Bacteria 3866
198 Ga0496117_0017871 3300048920 Bacteria 5908
199 Ga0496118_0093534 3300048921 Bacteria 2059
200 Ga0496121_0001760 3300048924 Bacteria 35275
201 Ga0496121_0117638 3300048924 Bacteria 2013
202 Ga0496122_0027531 3300048925 Bacteria 4856
203 Ga0496122_0036686 3300048925 Bacteria 3958
204 Ga0496123_0064750 3300048926 Bacteria 2328
205 Ga0496123_0084614 3300048926 Bacteria 1912
206 Ga0496124_0000459 3300048927 Bacteria 70625
207 Ga0496124_0004162 3300048927 Bacteria 17072
208 Ga0496124_0042730 3300048927 Bacteria 3900
209 Ga0496124_0160871 3300048927 Bacteria 1750
210 Ga0496125_0002846 3300048928 Bacteria 21782
211 Ga0496125_0022268 3300048928 Bacteria 5889
212 Ga0496126_0009245 3300048929 Bacteria 10506
213 Ga0496126_0123423 3300048929 Bacteria 2243
214 Ga0496126_0124146 3300048929 Bacteria 2236
215 Ga0501031_0035314 3300049568 Bacteria 3261
216 Ga0501032_0000642 3300049569 Bacteria 28381
217 Ga0501033_0028480 3300049570 Bacteria 4196
218 Ga0501036_0081741 3300049572 Bacteria 2730
219 Ga0501037_0113696 3300049573 Bacteria 1949
220 Ga0501040_0123666 3300049576 Bacteria 1816
221 Ga0501041_0004539 3300049577 Bacteria 8053
222 Ga0501042_0062311 3300049578 Bacteria 2664
223 Ga0501043_0023991 3300049579 Bacteria 4786
224 Ga0501043_0099481 3300049579 Bacteria 2286
225 Ga0501046_0085932 3300049580 Bacteria 2425
226 Ga0501048_0056007 3300049582 Bacteria 2798
227 Ga0501068_0004131 3300049584 Bacteria 7871
228 Ga0501070_0023271 3300049586 Bacteria 5189
229 Ga0501071_0055815 3300049587 Bacteria 2852
230 Ga0501072_0005650 3300049588 Bacteria 9523
231 Ga0501072_0073969 3300049588 Bacteria 2694
232 Ga0501073_0000005 3300049589 Bacteria 237180
233 Ga0501075_0001794 3300049591 Bacteria 14129
234 Ga0501076_0068113 3300049592 Bacteria 2843
235 Ga0501076_0087503 3300049592 Bacteria 2504
236 Ga0501077_0000039 3300049593 Bacteria 65680
237 Ga0501079_0007851 3300049741 Bacteria 8081
238 Ga0501079_0064876 3300049741 Bacteria 2817
239 Ga0501080_0006678 3300049742 Bacteria 10383
240 Ga0501081_0062224 3300049743 Bacteria 2588
241 Ga0501044_0034377 3300049823 Bacteria 5316
242 Ga0501045_0031236 3300049824 Bacteria 3857
243 nmdc:mga03683_3250_c1 3300050489 Bacteria 5208
244 nmdc:mga05p37_58202_c1 3300050507 Bacteria 4759
245 nmdc:mga0qj67_146240_c1 3300050509 Bacteria 1916
246 nmdc:mga06r32_204679_c1 3300050510 Bacteria 1961
247 nmdc:mga0n895_115738_c1 3300050512 Bacteria 2699
248 nmdc:mga0n895_194530_c1 3300050512 Bacteria 2059
249 nmdc:mga0n895_224187_c1 3300050512 Bacteria 1908
250 nmdc:mga0n895_226893_c1 3300050512 Bacteria 1896
251 nmdc:mga0n895_43578_c1 3300050512 Bacteria 4373
252 nmdc:mga0n895_48622_c1 3300050512 Bacteria 4152
253 nmdc:mga0a205_143044_c1 3300050515 Bacteria 2292
254 nmdc:mga0a205_245198_c1 3300050515 Bacteria 1672
255 Ga0495601_0006985 3300053077 Bacteria 6612
256 Ga0495612_0025074 3300053078 Bacteria 2395
257 Ga0495619_0046401 3300053085 Bacteria 2856
258 Ga0495619_0116179 3300053085 Bacteria 1832
259 Ga0500608_059256 3300053122 Bacteria 1832
260 Ga0500596_005647 3300053735 Bacteria 2179
261 Ga0501084_0079861 3300054114 Bacteria 2742
262 Ga0501082_0056531 3300060353 Bacteria 3380
263 Ga0501082_0070518 3300060353 Bacteria 3009
264 Ga0530510_0040050 3300061734 Bacteria 3381
265 Ga0530510_0042755 3300061734 Bacteria 3273
266 2644464351 2643221683 Bacteria 5749203
267 2738722317 2738541277 Bacteria 7458140
268 2738883778 2738541307 Bacteria 8606193
269 2739282681 2738543019 Bacteria 7459457
270 2894772935 2894772417 Bacteria 5305674
271 2904542227 2904541872 Bacteria 8915136
272 2915365096 2915358134 Bacteria 6050864
273 2929167512 2929160207 Bacteria 9075316
274 Ga0373955_0018829
275 JGI25406J46586_10015087
276 Ga0058860_10024956
277 Ga0070690_100101466
278 Ga0070670_100000797
279 Ga0070670_100049998
280 Ga0070677_10000853
281 Ga0070666_10001004
282 Ga0070666_10021227
283 Ga0070666_10138068
284 Ga0070661_100131494
285 Ga0070668_100014316
286 Ga0070669_100026023
287 Ga0070669_100097897
288 Ga0070675_100000275
289 Ga0070675_100127507
290 Ga0070671_100030364
291 Ga0070674_100000585
292 Ga0070673_100004206
293 Ga0070667_100007836
294 Ga0070667_100040486
295 Ga0070667_100149498
296 Ga0070713_100182751
297 Ga0070701_10048522
298 Ga0070700_100034438
299 Ga0070708_100233015
300 Ga0070678_100004107
301 Ga0068867_100000334
302 Ga0068867_100024871
303 Ga0070707_100085615
304 Ga0070707_100090040
305 Ga0070707_100113003
306 Ga0070698_100070252
307 Ga0070699_100001353
308 Ga0070697_100058924
309 Ga0070697_100173623
310 Ga0070697_100173701
311 Ga0068853_100078641
312 Ga0070672_100000355
313 Ga0070672_100203201
314 Ga0070665_100002321
315 Ga0070704_100021916
316 Ga0068855_100000337
317 Ga0068855_100017776
318 Ga0068855_100055270
319 Ga0068855_100095180
320 Ga0068855_100420362
321 Ga0070664_100023037
322 Ga0068856_100433222
323 Ga0068852_100000843
324 Ga0068859_100265014
325 Ga0068864_100025176
326 Ga0068870_10013633
327 Ga0068863_100140156
328 Ga0068858_100290892
329 Ga0068858_100326584
330 Ga0068860_100013987
331 Ga0068862_100015961
332 Ga0068862_100031279
333 Ga0081455_10002376
334 Ga0081455_10006223
335 Ga0081538_10000105
336 Ga0081538_10010738
337 Ga0081538_10018212
338 Ga0081538_10065299
339 Ga0081539_10002359
340 Ga0081539_10013347
341 Ga0075362_10003522
342 Ga0068871_100058706
343 Ga0075428_100060337
344 Ga0075431_100114650
345 Ga0075431_100212482
346 Ga0075434_100243840
347 Ga0075434_100261876
348 Ga0075434_100277727
349 Ga0075436_100105162
350 Ga0097620_100265001
351 Ga0105240_10000320
352 Ga0105240_10027176
353 Ga0105240_10133517
354 Ga0111539_10110265
355 Ga0114129_10142881
356 Ga0114129_10263524
357 Ga0105248_10023705
358 Ga0105248_10244089
359 Ga0105237_10015484
360 Ga0105237_10080504
361 Ga0105238_10037687
362 Ga0105249_10031663
363 Ga0105246_10164380
364 Ga0157373_10034506
365 Ga0157369_10034804
366 Ga0157378_10027489
367 Ga0157378_10070191
368 Ga0163162_10060253
369 Ga0163162_10081996
370 Ga0157372_10071158
371 Ga0163163_10143476
372 Ga0157379_10057053
373 Ga0163161_10030385
374 Ga0163161_10031753
375 Ga0163161_10091833
376 Ga0213875_10001219
377 Ga0209675_1001296
378 Ga0209675_1004016
379 Ga0209025_1000049
380 Ga0209050_1002587
381 Ga0207682_10004128
382 Ga0207688_10013947
383 Ga0207680_10012626
384 Ga0207685_10069502
385 Ga0207695_10000227
386 Ga0207695_10015737
387 Ga0207671_10017969
388 Ga0207646_10043224
389 Ga0207646_10107345
390 Ga0207681_10020919
391 Ga0207681_10070892
392 Ga0207694_10000005
393 Ga0207650_10000832
394 Ga0207650_10001092
395 Ga0207659_10000184
396 Ga0207659_10095843
397 Ga0207644_10000942
398 Ga0207670_10064828
399 Ga0207669_10001477
400 Ga0207691_10001564
401 Ga0207691_10239255
402 Ga0207711_10215584
403 Ga0207667_10000011
404 Ga0207667_10026326
405 Ga0207667_10125595
406 Ga0207651_10000894
407 Ga0207668_10028711
408 Ga0207658_10006362
409 Ga0207658_10124086
410 Ga0207703_10358695
411 Ga0207678_10500159
412 Ga0207708_10035429
413 Ga0207702_10390965
414 Ga0207641_10102479
415 Ga0207648_10003880
416 Ga0207674_10158969
417 Ga0207675_100022656
418 Ga0207683_10012674
419 Ga0265354_1000107
420 Ga0265356_1002027
421 Ga0268266_10006298
422 Ga0268266_10347044
423 Ga0268265_10007226
424 Ga0268265_10069856
425 Ga0268264_10009556
426 Ga0268264_10040415
427 Ga0307517_10055302
428 Ga0265332_10000111
429 Ga0265332_10000143
430 Ga0265329_10005732
431 Ga0265329_10008540
432 Ga0265329_10015709
433 Ga0265331_10000095
434 Ga0265331_10000119
435 Ga0265316_10000063
436 Ga0265314_10000194
437 Ga0265314_10001570
438 Ga0265342_10001051
439 Ga0265342_10016668
440 Ga0307516_10016574
441 Ga0307412_10004692
442 Ga0373923_0022554
443 Ga0373953_0019433
444 Ga0373956_0018382
445 Ga0373927_0051023
446 Ga0373927_0063715
447 Ga0373933_0010765
448 Ga0373933_0152805
449 Ga0373947_0063640
450 Ga0373937_0026048
451 Ga0395905_0000389
452 Ga0395901_0030054
453 Ga0436365_0061299
454 Ga0436365_0891944
455 Ga0436365_1143192
456 Ga0439450_001198
457 Ga0439451_003594
458 Ga0450911_000036
459 Ga0495651_0049906
460 Ga0495634_0005536
461 Ga0495635_0077270
462 Ga0495599_0041755
463 Ga0495613_0000737
464 Ga0495600_0066266
465 Ga0495674_0015445
466 Ga0496101_0008489
467 Ga0496104_0167050
468 Ga0496108_0000875
469 Ga0496110_0062177
470 Ga0496116_0030567
471 Ga0496117_0017871
472 Ga0496118_0093534
473 Ga0496121_0001760
474 Ga0496121_0117638
475 Ga0496122_0027531
476 Ga0496122_0036686
477 Ga0496123_0064750
478 Ga0496123_0084614
479 Ga0496124_0000459
480 Ga0496124_0004162
481 Ga0496124_0042730
482 Ga0496124_0160871
483 Ga0496125_0002846
484 Ga0496125_0022268
485 Ga0496126_0009245
486 Ga0496126_0123423
487 Ga0496126_0124146
488 Ga0501031_0035314
489 Ga0501032_0000642
490 Ga0501033_0028480
491 Ga0501036_0081741
492 Ga0501037_0113696
493 Ga0501040_0123666
494 Ga0501041_0004539
495 Ga0501042_0062311
496 Ga0501043_0023991
497 Ga0501043_0099481
498 Ga0501046_0085932
499 Ga0501048_0056007
500 Ga0501068_0004131
501 Ga0501070_0023271
502 Ga0501071_0055815
503 Ga0501072_0005650
504 Ga0501072_0073969
505 Ga0501073_0000005
506 Ga0501075_0001794
507 Ga0501076_0068113
508 Ga0501076_0087503
509 Ga0501077_0000039
510 Ga0501079_0007851
511 Ga0501079_0064876
512 Ga0501080_0006678
513 Ga0501081_0062224
514 Ga0501044_0034377
515 Ga0501045_0031236
516 nmdc:mga03683_3250_c1
517 nmdc:mga05p37_58202_c1
518 nmdc:mga0qj67_146240_c1
519 nmdc:mga06r32_204679_c1
520 nmdc:mga0n895_115738_c1
521 nmdc:mga0n895_194530_c1
522 nmdc:mga0n895_224187_c1
523 nmdc:mga0n895_226893_c1
524 nmdc:mga0n895_43578_c1
525 nmdc:mga0n895_48622_c1
526 nmdc:mga0a205_143044_c1
527 nmdc:mga0a205_245198_c1
528 Ga0495601_0006985
529 Ga0495612_0025074
530 Ga0495619_0046401
531 Ga0495619_0116179
532 Ga0500608_059256
533 Ga0500596_005647
534 Ga0501084_0079861
535 Ga0501082_0056531
536 Ga0501082_0070518
537 Ga0530510_0040050
538 Ga0530510_0042755
539 2644464351
540 2738722317
541 2738883778
542 2739282681
543 2894772935
544 2904542227
545 2915365096
546 2929167512

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

263

414

0.96

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

157

251

0.93

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

33

153

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.885 8 394
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8829 1 394
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.8808 1 394
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.8766 8 394
8hk0-assembly1.cif.gz_A crystal structure of fic32-33 complex from streptomyces ficellus nrrl 8067 0.8752 1 385
ID Description Score Start End Superfamily
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9886 128 237 2.40.110.10
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9711 128 237 2.40.110.10
af_M0RAD8_170_241_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9553 125 194 2.40.110.10
4x28B02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9461 125 232 2.40.110.10
5iduB02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9438 128 242 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9882 143 246 GO:0005886
GO:0016627
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9788 143 246 GO:0005886
GO:0016627
AF-A0A351EJS1-F1-model_v4 Acyl-CoA dehydrogenase 0.9772 131 220 GO:0005886
GO:0016627
AF-A0A355SPG1-F1-model_v4 deleted 0.9764 119 223
AF-A0A2V9JTB2-F1-model_v4 Acyl-CoA oxidase/dehydrogenase middle domain-containing protein 0.9706 141 248 GO:0005886
GO:0016627

Map