F379239
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 273 | 174 | 546 | 558 |
Family's Representative Sequence
| Representative Sequence | 3300046518|Ga0495631_0009527|Ga0495631_0009527_1074_2852 |
| Length | 592 |
| Sequence | MTLFFGVQILIPGTDREVLTILYFYRPNPMENKPVARTLRLLSQLMELHDKNPFKIKSLANAAFKVDKLPYRIAGKSLAEMEKIDGIGKSTATKIAELLETGSITELSDLISATPEGVVEMLGIKGIGPKKIAIIWHDLGIENIGELYYACNENRLIEAKGFGLKTQEEISKVIEFRMASNGKFLYAQVDSVASELFQTIKNMLPDAILSYTGEFRRCCEIINELSFLVGSSDVRSDVETLTQSNILQNITVKEHHVSGETINGLLVDIAVVNNLAFHYELFVQTGTEDHVKGVVGRISKDIKEADSEEAIYKKAGLAYISPELREGNTFIEKATKDQLPTLITYQDLKGTLHNHSTWSDGVNTLEEMALYCRDHLKLEYLGMCDHSKSAFYAKGLSIERVLQQHEEIDHLNKKITGFHIFKGIESDILNDGSLDYPDEILQRFDFIVASVHSNLKMDKEKATVRLIKAVENPYTTILGHPTGRLLLSRKGYEFDYKKVIDACAANNVVIEINANPLRLDLDWRWHQYALDKGVKLSINPDAHRIEGFLDMHYGALAARKGGLNKEMCLNAFSLEEIKKEFESKKQVINAHR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 2 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 3 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 4 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 5 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 6 | 3300002774 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA | Metagenome | Endosphere |
| 7 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 8 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 9 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 10 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 11 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 12 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 13 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 14 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 15 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 16 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 17 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 20 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 26 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 27 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 28 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 30 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 31 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 32 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 35 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 37 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 38 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 54 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 55 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 56 | 3300015682 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 | Metagenome | Rhizosphere |
| 57 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 61 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 62 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 63 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 93 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 94 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 95 | 3300030742 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 | Metagenome | Rhizosphere |
| 96 | 3300030744 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 | Metagenome | Rhizosphere |
| 97 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 98 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 99 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 100 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 101 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 102 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 103 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 104 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 105 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 106 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 107 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 108 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 109 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 110 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 111 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 112 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 126 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 127 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 128 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 129 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 130 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 131 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 132 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 133 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 134 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 135 | 2585427687 | Pedobacter borealis DSM 19626 | Isolate | Rhizosphere |
| 136 | 2599185184 | Mucilaginibacter sp. NFR10 | Isolate | Rhizoplane |
| 137 | 2721755487 | Sphingobacterium sp. B29 | Isolate | Rhizosphere |
| 138 | 2738541283 | Pedobacter sp. OK701 | Isolate | Unclassified |
| 139 | 2738541284 | Pedobacter sp. YR016 | Isolate | Unclassified |
| 140 | 2738541302 | Pedobacter sp. CF074 | Isolate | Unclassified |
| 141 | 2738543023 | Pedobacter sp. OK628 | Isolate | Unclassified |
| 142 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 143 | 2739367656 | Pedobacter sp. CF523 | Isolate | Unclassified |
| 144 | 2739367663 | Pedobacter sp. YR510 | Isolate | Unclassified |
| 145 | 2775506987 | Pedobacter ginsengisoli T01R-27 | Isolate | Unclassified |
| 146 | 2818991437 | Pedobacter terrae 518 | Isolate | Unclassified |
| 147 | 2842722452 | Pedobacter sp. R-72249 | Isolate | Unclassified |
| 148 | 2842903701 | Olivibacter sp. R-72191 | Isolate | Unclassified |
| 149 | 2842909656 | Pedobacter sp. R-72393 | Isolate | Unclassified |
| 150 | 2849281842 | Pedobacter sp. AK013 | Isolate | Rhizosphere |
| 151 | 2852623160 | Mucilaginibacter sp. AK015 | Isolate | Rhizosphere |
| 152 | 2852627209 | Pedobacter sp. AK017 | Isolate | Rhizosphere |
| 153 | 2857627736 | Pedobacter sp. R-74587 | Isolate | Unclassified |
| 154 | 2884933994 | Mucilaginibacter sp. 14171R-50 | Isolate | Rhizosphere |
| 155 | 2890737413 | Parapedobacter sp. SGR-10 | Isolate | Rhizosphere |
| 156 | 2896317667 | Sphingobacterium sp. SGR-19 | Isolate | Rhizosphere |
| 157 | 2896344016 | Sphingobacterium sp. SGL-16 | Isolate | Rhizosphere |
| 158 | 2898713307 | Sphingobacterium sp. SGG-5 | Isolate | Rhizosphere |
| 159 | 2902048731 | Pedobacter ureilyticus THG-T11 | Isolate | Rhizosphere |
| 160 | 2904445276 | Pedobacter terrae 1734 | Isolate | Rhizosphere |
| 161 | 2904780799 | Sphingobacterium sp. 1304 | Isolate | Rhizosphere |
| 162 | 2911138879 | Spirosoma sp. KUDC1026 | Isolate | Rhizosphere |
| 163 | 2919177583 | Sphingobacterium sp. 2149 | Isolate | Rhizosphere |
| 164 | 2919186247 | Pedobacter africanus 2697 | Isolate | Rhizosphere |
| 165 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 166 | 2928078545 | Mucilaginibacter rubeus 1215 | Isolate | Unclassified |
| 167 | 2928147474 | Mucilaginibacter rubeus 2025 | Isolate | Unclassified |
| 168 | 2932082852 | Mucilaginibacter sp. 3215 | Isolate | Rhizosphere |
| 169 | 2939664404 | Pedobacter africanus 2990 | Isolate | Rhizosphere |
| 170 | 2945997725 | Pedobacter sp. W3I1 | Isolate | Rhizosphere |
| 171 | 2954016120 | Flavobacterium sp. W4I14 | Isolate | Rhizosphere |
| 172 | 2977232053 | Mucilaginibacter terrae SORGH_AS 422 | Isolate | Unclassified |
| 173 | 3003233435 | Sphingobacterium shayense CrR18 | Isolate | Unclassified |
| 174 | 8055588893 | Parapedobacter lycopersici KACC 18788 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.35 |
| Metatranscriptomes | 0 |
| Isolates | 14.65 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.99 |
| Nodule | 0 |
| Rhizoplane | 0.37 |
| Rhizosphere | 76.19 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.47 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495631_0009527 | 3300046518 | Bacteria | 4849 |
| 2 | SwRhRL2b_contig_3317121 | 2162886007 | Bacteria | 19404 |
| 3 | JGI24735J21928_10000004 | 3300002067 | Bacteria | 381713 |
| 4 | JGI25162J39368_1000017 | 3300002737 | Bacteria | 281385 |
| 5 | JGI25162J39368_1000188 | 3300002737 | Bacteria | 64938 |
| 6 | JGI25162J39368_1003818 | 3300002737 | Bacteria | 3973 |
| 7 | JGI25152J39213_1000017 | 3300002773 | Bacteria | 109718 |
| 8 | JGI25150J39212_1000001 | 3300002774 | Bacteria | 1318726 |
| 9 | JGI25151J46595_10000001 | 3300003187 | Bacteria | 887211 |
| 10 | JGI25165J46597_1000615 | 3300003214 | Bacteria | 30104 |
| 11 | JGI25153J46596_10000053 | 3300003215 | Bacteria | 138301 |
| 12 | rootH1_10013649 | 3300003316 | Bacteria | 8052 |
| 13 | rootH2_10002594 | 3300003320 | Bacteria | 27151 |
| 14 | rootH2_10021891 | 3300003320 | Bacteria | 7480 |
| 15 | rootH2_10234976 | 3300003320 | Bacteria | 2738 |
| 16 | rootH1_10018482 | 3300003323 | Bacteria | 48371 |
| 17 | Ga0055536_1000001 | 3300003781 | Bacteria | 630663 |
| 18 | Ga0055530_10001706 | 3300003791 | Bacteria | 15551 |
| 19 | Ga0065714_10002285 | 3300005288 | Bacteria | 27785 |
| 20 | Ga0065714_10003407 | 3300005288 | Bacteria | 18297 |
| 21 | Ga0065714_10003544 | 3300005288 | Bacteria | 19013 |
| 22 | Ga0065714_10004468 | 3300005288 | Bacteria | 7295 |
| 23 | Ga0065704_10070465 | 3300005289 | Bacteria | 23761 |
| 24 | Ga0065704_10074161 | 3300005289 | Bacteria | 6484 |
| 25 | Ga0070658_10000018 | 3300005327 | Bacteria | 200558 |
| 26 | Ga0070676_10003389 | 3300005328 | Bacteria | 8294 |
| 27 | Ga0068868_100011794 | 3300005338 | Bacteria | 6371 |
| 28 | Ga0070660_100008700 | 3300005339 | Bacteria | 7107 |
| 29 | Ga0070660_100070708 | 3300005339 | Bacteria | 2723 |
| 30 | Ga0070673_100007775 | 3300005364 | Bacteria | 7093 |
| 31 | Ga0070659_100000899 | 3300005366 | Bacteria | 21771 |
| 32 | Ga0070678_100005532 | 3300005456 | Bacteria | 7319 |
| 33 | Ga0070662_100000954 | 3300005457 | Bacteria | 17728 |
| 34 | Ga0070681_10041629 | 3300005458 | Bacteria | 4604 |
| 35 | Ga0070684_100007243 | 3300005535 | Bacteria | 8621 |
| 36 | Ga0068853_100021212 | 3300005539 | Bacteria | 5411 |
| 37 | Ga0070665_100000072 | 3300005548 | Bacteria | 198575 |
| 38 | Ga0068855_100000090 | 3300005563 | Bacteria | 110528 |
| 39 | Ga0068855_100000268 | 3300005563 | Bacteria | 64693 |
| 40 | Ga0068855_100024800 | 3300005563 | Bacteria | 7174 |
| 41 | Ga0068855_100044636 | 3300005563 | Bacteria | 5245 |
| 42 | Ga0068855_100154803 | 3300005563 | Bacteria | 2605 |
| 43 | Ga0068857_100036578 | 3300005577 | Bacteria | 4350 |
| 44 | Ga0068856_100000897 | 3300005614 | Bacteria | 31872 |
| 45 | Ga0068856_100002063 | 3300005614 | Bacteria | 20822 |
| 46 | Ga0068856_100130751 | 3300005614 | Bacteria | 2515 |
| 47 | Ga0068852_100000143 | 3300005616 | Bacteria | 48192 |
| 48 | Ga0068858_100060682 | 3300005842 | Bacteria | 3495 |
| 49 | Ga0075366_10001407 | 3300006195 | Bacteria | 12029 |
| 50 | Ga0097621_100000028 | 3300006237 | Bacteria | 71678 |
| 51 | Ga0068871_100000066 | 3300006358 | Bacteria | 57980 |
| 52 | Ga0068865_100000732 | 3300006881 | Bacteria | 18431 |
| 53 | Ga0105240_10000876 | 3300009093 | Bacteria | 54171 |
| 54 | Ga0105240_10021397 | 3300009093 | Bacteria | 8603 |
| 55 | Ga0105240_10133914 | 3300009093 | Bacteria | 2969 |
| 56 | Ga0105240_10180841 | 3300009093 | Bacteria | 2488 |
| 57 | Ga0105243_10000004 | 3300009148 | Bacteria | 601266 |
| 58 | Ga0105241_10003705 | 3300009174 | Bacteria | 11358 |
| 59 | Ga0105237_10000233 | 3300009545 | Bacteria | 79346 |
| 60 | Ga0105237_10000485 | 3300009545 | Bacteria | 56664 |
| 61 | Ga0105237_10004544 | 3300009545 | Bacteria | 16031 |
| 62 | Ga0105237_10005769 | 3300009545 | Bacteria | 13907 |
| 63 | Ga0105238_10033079 | 3300009551 | Bacteria | 5261 |
| 64 | Ga0105238_10039641 | 3300009551 | Bacteria | 4776 |
| 65 | Ga0105239_10000039 | 3300010375 | Bacteria | 203537 |
| 66 | Ga0105239_10000120 | 3300010375 | Bacteria | 110003 |
| 67 | Ga0105239_10001068 | 3300010375 | Bacteria | 38074 |
| 68 | Ga0105239_10002256 | 3300010375 | Bacteria | 24634 |
| 69 | Ga0105239_10004588 | 3300010375 | Bacteria | 16460 |
| 70 | Ga0105239_10140015 | 3300010375 | Bacteria | 2696 |
| 71 | Ga0105239_10142246 | 3300010375 | Bacteria | 2674 |
| 72 | Ga0105246_10092820 | 3300011119 | Unclassified | 2179 |
| 73 | Ga0157373_10000031 | 3300013100 | Bacteria | 126446 |
| 74 | Ga0157373_10003403 | 3300013100 | Bacteria | 12032 |
| 75 | Ga0157373_10004725 | 3300013100 | Bacteria | 10242 |
| 76 | Ga0157373_10049976 | 3300013100 | Bacteria | 2979 |
| 77 | Ga0157371_10000021 | 3300013102 | Bacteria | 301017 |
| 78 | Ga0157371_10000251 | 3300013102 | Bacteria | 74986 |
| 79 | Ga0157371_10001069 | 3300013102 | Bacteria | 29903 |
| 80 | Ga0157371_10001458 | 3300013102 | Bacteria | 24530 |
| 81 | Ga0157371_10005834 | 3300013102 | Bacteria | 10303 |
| 82 | Ga0157370_10000296 | 3300013104 | Bacteria | 63170 |
| 83 | Ga0157370_10007900 | 3300013104 | Bacteria | 11527 |
| 84 | Ga0157370_10008402 | 3300013104 | Bacteria | 11136 |
| 85 | Ga0157370_10047332 | 3300013104 | Bacteria | 4123 |
| 86 | Ga0157370_10047392 | 3300013104 | Bacteria | 4120 |
| 87 | Ga0157370_10051317 | 3300013104 | Bacteria | 3940 |
| 88 | Ga0157370_10077177 | 3300013104 | Bacteria | 3138 |
| 89 | Ga0157370_10085486 | 3300013104 | Bacteria | 2963 |
| 90 | Ga0157369_10000008 | 3300013105 | Bacteria | 309315 |
| 91 | Ga0157369_10001443 | 3300013105 | Bacteria | 29190 |
| 92 | Ga0157374_10000174 | 3300013296 | Bacteria | 59597 |
| 93 | Ga0157374_10000451 | 3300013296 | Bacteria | 37378 |
| 94 | Ga0157374_10058518 | 3300013296 | Bacteria | 3601 |
| 95 | Ga0163162_10000010 | 3300013306 | Bacteria | 302032 |
| 96 | Ga0163162_10000206 | 3300013306 | Bacteria | 54701 |
| 97 | Ga0157372_10000050 | 3300013307 | Bacteria | 140381 |
| 98 | Ga0157372_10000266 | 3300013307 | Bacteria | 57783 |
| 99 | Ga0157372_10007808 | 3300013307 | Bacteria | 11365 |
| 100 | Ga0157372_10131432 | 3300013307 | Bacteria | 2880 |
| 101 | Ga0157372_10172197 | 3300013307 | Bacteria | 2505 |
| 102 | Ga0157375_10012681 | 3300013308 | Bacteria | 7481 |
| 103 | Ga0157375_10059429 | 3300013308 | Bacteria | 3787 |
| 104 | Ga0182008_10000008 | 3300014497 | Bacteria | 371823 |
| 105 | Ga0182008_10000259 | 3300014497 | Bacteria | 41267 |
| 106 | Ga0182006_1000091 | 3300015261 | Bacteria | 109227 |
| 107 | Ga0182006_1000477 | 3300015261 | Bacteria | 31356 |
| 108 | Ga0182006_1001551 | 3300015261 | Bacteria | 13722 |
| 109 | Ga0182006_1003438 | 3300015261 | Bacteria | 8095 |
| 110 | Ga0182007_10000003 | 3300015262 | Bacteria | 548244 |
| 111 | Ga0183373_1001 | 3300015682 | Bacteria | 1410374 |
| 112 | Ga0163161_10000480 | 3300017792 | Bacteria | 32905 |
| 113 | Ga0163161_10001945 | 3300017792 | Bacteria | 15065 |
| 114 | Ga0163161_10007989 | 3300017792 | Bacteria | 7315 |
| 115 | Ga0163161_10010064 | 3300017792 | Bacteria | 6547 |
| 116 | Ga0207427_100172 | 3300025231 | Bacteria | 71550 |
| 117 | Ga0209437_100024 | 3300025233 | Bacteria | 592878 |
| 118 | Ga0209437_100034 | 3300025233 | Bacteria | 494007 |
| 119 | Ga0207425_1000002 | 3300025245 | Bacteria | 1362590 |
| 120 | Ga0209026_1000219 | 3300025250 | Bacteria | 78822 |
| 121 | Ga0209026_1006379 | 3300025250 | Bacteria | 2905 |
| 122 | Ga0209129_1000002 | 3300025258 | Bacteria | 1359086 |
| 123 | Ga0209233_1000038 | 3300025261 | Bacteria | 548972 |
| 124 | Ga0209233_1004334 | 3300025261 | Bacteria | 4845 |
| 125 | Ga0209455_1002840 | 3300025272 | Bacteria | 6432 |
| 126 | Ga0209676_1000008 | 3300025292 | Bacteria | 991778 |
| 127 | Ga0209025_1000004 | 3300025294 | Bacteria | 1361782 |
| 128 | Ga0209758_1000006 | 3300025297 | Bacteria | 1359562 |
| 129 | Ga0209050_1000045 | 3300025298 | Bacteria | 388022 |
| 130 | Ga0207647_10000662 | 3300025904 | Bacteria | 26925 |
| 131 | Ga0207645_10001390 | 3300025907 | Bacteria | 19866 |
| 132 | Ga0207705_10000036 | 3300025909 | Bacteria | 200787 |
| 133 | Ga0207707_10040640 | 3300025912 | Bacteria | 4062 |
| 134 | Ga0207695_10000013 | 3300025913 | Bacteria | 821265 |
| 135 | Ga0207695_10002721 | 3300025913 | Bacteria | 25814 |
| 136 | Ga0207695_10136220 | 3300025913 | Bacteria | 2408 |
| 137 | Ga0207671_10000663 | 3300025914 | Bacteria | 44922 |
| 138 | Ga0207671_10005404 | 3300025914 | Bacteria | 11765 |
| 139 | Ga0207671_10012094 | 3300025914 | Bacteria | 6969 |
| 140 | Ga0207671_10014472 | 3300025914 | Bacteria | 6232 |
| 141 | Ga0207657_10046656 | 3300025919 | Bacteria | 3794 |
| 142 | Ga0207652_10013689 | 3300025921 | Bacteria | 6560 |
| 143 | Ga0207694_10003884 | 3300025924 | Bacteria | 11815 |
| 144 | Ga0207694_10126771 | 3300025924 | Bacteria | 2043 |
| 145 | Ga0207690_10000594 | 3300025932 | Bacteria | 23425 |
| 146 | Ga0207706_10001262 | 3300025933 | Bacteria | 25516 |
| 147 | Ga0207709_10000010 | 3300025935 | Bacteria | 601305 |
| 148 | Ga0207704_10000044 | 3300025938 | Bacteria | 86753 |
| 149 | Ga0207667_10000009 | 3300025949 | Bacteria | 603135 |
| 150 | Ga0207667_10000971 | 3300025949 | Bacteria | 36600 |
| 151 | Ga0207667_10020086 | 3300025949 | Bacteria | 7438 |
| 152 | Ga0207667_10200458 | 3300025949 | Bacteria | 2047 |
| 153 | Ga0207651_10001871 | 3300025960 | Bacteria | 9842 |
| 154 | Ga0207703_10083920 | 3300026035 | Bacteria | 2663 |
| 155 | Ga0207639_10010971 | 3300026041 | Bacteria | 6280 |
| 156 | Ga0207702_10000797 | 3300026078 | Bacteria | 33437 |
| 157 | Ga0207702_10004560 | 3300026078 | Bacteria | 12275 |
| 158 | Ga0207648_10000529 | 3300026089 | Bacteria | 42805 |
| 159 | Ga0207674_10047681 | 3300026116 | Bacteria | 4390 |
| 160 | Ga0207683_10082956 | 3300026121 | Unclassified | 2848 |
| 161 | Ga0207698_10001299 | 3300026142 | Bacteria | 14560 |
| 162 | Ga0268266_10000089 | 3300028379 | Bacteria | 198566 |
| 163 | Ga0307517_10010238 | 3300028786 | Bacteria | 13156 |
| 164 | Ga0307515_10001997 | 3300028794 | Bacteria | 45190 |
| 165 | Ga0307515_10002629 | 3300028794 | Bacteria | 38616 |
| 166 | Ga0307515_10089089 | 3300028794 | Bacteria | 3890 |
| 167 | Ga0316176_1083685 | 3300030732 | Bacteria | 12031 |
| 168 | Ga0316183_1116149 | 3300030742 | Bacteria | 41729 |
| 169 | Ga0316181_1062473 | 3300030744 | Bacteria | 11234 |
| 170 | Ga0307408_100000143 | 3300031548 | Bacteria | 79423 |
| 171 | Ga0307408_100000672 | 3300031548 | Bacteria | 28427 |
| 172 | Ga0307408_100007095 | 3300031548 | Bacteria | 7415 |
| 173 | Ga0307405_10000042 | 3300031731 | Bacteria | 79124 |
| 174 | Ga0307407_10000022 | 3300031903 | Bacteria | 120355 |
| 175 | Ga0307412_10000023 | 3300031911 | Bacteria | 237005 |
| 176 | Ga0307412_10005395 | 3300031911 | Bacteria | 7176 |
| 177 | Ga0307416_100000047 | 3300032002 | Bacteria | 120385 |
| 178 | Ga0307414_10000274 | 3300032004 | Bacteria | 31100 |
| 179 | Ga0307414_10002063 | 3300032004 | Bacteria | 10434 |
| 180 | Ga0307414_10004058 | 3300032004 | Bacteria | 7895 |
| 181 | Ga0307414_10021617 | 3300032004 | Bacteria | 4043 |
| 182 | Ga0307414_10160865 | 3300032004 | Unclassified | 1783 |
| 183 | Ga0307507_10000015 | 3300033179 | Bacteria | 237419 |
| 184 | Ga0395899_0000002 | 3300037312 | Bacteria | 1324310 |
| 185 | Ga0395899_0000640 | 3300037312 | Bacteria | 36134 |
| 186 | Ga0395899_0006330 | 3300037312 | Bacteria | 9163 |
| 187 | Ga0395899_0012806 | 3300037312 | Bacteria | 6427 |
| 188 | Ga0395900_0000277 | 3300037418 | Bacteria | 77256 |
| 189 | Ga0395900_0001234 | 3300037418 | Bacteria | 31453 |
| 190 | Ga0395900_0006335 | 3300037418 | Bacteria | 12338 |
| 191 | Ga0395898_0001918 | 3300037466 | Bacteria | 26473 |
| 192 | Ga0395905_0000068 | 3300037471 | Bacteria | 177163 |
| 193 | Ga0395905_0000727 | 3300037471 | Bacteria | 43437 |
| 194 | Ga0395901_0000199 | 3300038443 | Bacteria | 76415 |
| 195 | Ga0395901_0004520 | 3300038443 | Bacteria | 14030 |
| 196 | Ga0436361_1082824 | 3300039447 | Bacteria | 5377 |
| 197 | Ga0466969_0010399 | 3300044656 | Bacteria | 4934 |
| 198 | Ga0466961_0066686 | 3300044693 | Unclassified | 2286 |
| 199 | Ga0495650_0000087 | 3300046471 | Bacteria | 234870 |
| 200 | Ga0495585_0000286 | 3300046492 | Bacteria | 50524 |
| 201 | Ga0495585_0000553 | 3300046492 | Bacteria | 35342 |
| 202 | Ga0495606_0000052 | 3300046507 | Bacteria | 201529 |
| 203 | Ga0495606_0071592 | 3300046507 | Bacteria | 2182 |
| 204 | Ga0495606_0072679 | 3300046507 | Bacteria | 2160 |
| 205 | Ga0495610_0002045 | 3300046512 | Bacteria | 17226 |
| 206 | Ga0495610_0014382 | 3300046512 | Bacteria | 4649 |
| 207 | Ga0495616_0005378 | 3300046513 | Bacteria | 7893 |
| 208 | Ga0495616_0010475 | 3300046513 | Bacteria | 5364 |
| 209 | Ga0495648_0001785 | 3300046524 | Bacteria | 20692 |
| 210 | Ga0495652_0101987 | 3300046529 | Bacteria | 2326 |
| 211 | Ga0495633_0000035 | 3300046558 | Bacteria | 185403 |
| 212 | Ga0495633_0003276 | 3300046558 | Bacteria | 10897 |
| 213 | Ga0495668_0000032 | 3300046616 | Bacteria | 254951 |
| 214 | Ga0495625_0000008 | 3300046660 | Bacteria | 536165 |
| 215 | Ga0495625_0000753 | 3300046660 | Bacteria | 45225 |
| 216 | Ga0495625_0001038 | 3300046660 | Bacteria | 36510 |
| 217 | Ga0495625_0019264 | 3300046660 | Bacteria | 5299 |
| 218 | Ga0495649_0000018 | 3300046694 | Bacteria | 220586 |
| 219 | Ga0495687_000484 | 3300047443 | Bacteria | 48242 |
| 220 | Ga0495687_003823 | 3300047443 | Bacteria | 10613 |
| 221 | Ga0495686_0000052 | 3300047472 | Bacteria | 262622 |
| 222 | Ga0496116_0008863 | 3300048919 | Bacteria | 8660 |
| 223 | Ga0496117_0003761 | 3300048920 | Bacteria | 17370 |
| 224 | Ga0496122_0012868 | 3300048925 | Bacteria | 8271 |
| 225 | Ga0496123_0015016 | 3300048926 | Bacteria | 6380 |
| 226 | Ga0496123_0015103 | 3300048926 | Bacteria | 6354 |
| 227 | nmdc:mga0k408_3024_c1 | 3300050493 | Bacteria | 8918 |
| 228 | nmdc:mga0k408_979_c1 | 3300050493 | Bacteria | 15710 |
| 229 | Ga0500635_0000409 | 3300053080 | Bacteria | 12861 |
| 230 | Ga0500651_0000111 | 3300053093 | Bacteria | 50030 |
| 231 | Ga0500618_000037 | 3300053125 | Bacteria | 117320 |
| 232 | Ga0500622_0002943 | 3300053156 | Bacteria | 11819 |
| 233 | Ga0500624_000572 | 3300053157 | Bacteria | 10163 |
| 234 | 2586209047 | 2585427687 | Bacteria | 5544917 |
| 235 | 2599478317 | 2599185184 | Bacteria | 6430550 |
| 236 | 2722727449 | 2721755487 | Bacteria | 6357185 |
| 237 | 2738757378 | 2738541283 | Bacteria | 7222293 |
| 238 | 2738760485 | 2738541284 | Bacteria | 5199923 |
| 239 | 2738855623 | 2738541302 | Bacteria | 5944758 |
| 240 | 2739300725 | 2738543023 | Bacteria | 6767879 |
| 241 | 2739590505 | 2739367651 | Bacteria | 6359826 |
| 242 | 2739617252 | 2739367656 | Bacteria | 5152243 |
| 243 | 2739647511 | 2739367663 | Bacteria | 5040914 |
| 244 | 2776612609 | 2775506987 | Bacteria | 5373360 |
| 245 | 2819549301 | 2818991437 | Bacteria | 5805520 |
| 246 | 2842724818 | 2842722452 | Bacteria | 6263924 |
| 247 | 2842904030 | 2842903701 | Bacteria | 6986368 |
| 248 | 2842913162 | 2842909656 | Bacteria | 6185908 |
| 249 | 2849286931 | 2849281842 | Bacteria | 6065644 |
| 250 | 2852626901 | 2852623160 | Bacteria | 4376875 |
| 251 | 2852630503 | 2852627209 | Bacteria | 5896285 |
| 252 | 2857631253 | 2857627736 | Bacteria | 5625397 |
| 253 | 2884938048 | 2884933994 | Bacteria | 4535041 |
| 254 | 2890737920 | 2890737413 | Bacteria | 4269751 |
| 255 | 2896320063 | 2896317667 | Bacteria | 4606601 |
| 256 | 2896344682 | 2896344016 | Bacteria | 3811746 |
| 257 | 2898714896 | 2898713307 | Bacteria | 4110805 |
| 258 | 2902051812 | 2902048731 | Bacteria | 4976191 |
| 259 | 2904448306 | 2904445276 | Bacteria | 5310396 |
| 260 | 2904781781 | 2904780799 | Bacteria | 5840761 |
| 261 | 2911141350 | 2911138879 | Bacteria | 5811561 |
| 262 | 2919181539 | 2919177583 | Bacteria | 5641607 |
| 263 | 2919189760 | 2919186247 | Bacteria | 6244071 |
| 264 | 2919439002 | 2919437846 | Bacteria | 6199444 |
| 265 | 2928080633 | 2928078545 | Bacteria | 6534839 |
| 266 | 2928150857 | 2928147474 | Bacteria | 6512076 |
| 267 | 2932082983 | 2932082852 | Bacteria | 6563563 |
| 268 | 2939667985 | 2939664404 | Bacteria | 6364494 |
| 269 | 2946001806 | 2945997725 | Bacteria | 6404843 |
| 270 | 2954018641 | 2954016120 | Bacteria | 6446024 |
| 271 | 2977236247 | 2977232053 | Bacteria | 5485925 |
| 272 | 3003237363 | 3003233435 | Bacteria | 4458031 |
| 273 | 8055589612 | 8055588893 | Bacteria | 3619545 |
| 274 | Ga0495631_0009527 | |||
| 275 | SwRhRL2b_contig_3317121 | |||
| 276 | JGI24735J21928_10000004 | |||
| 277 | JGI25162J39368_1000017 | |||
| 278 | JGI25162J39368_1000188 | |||
| 279 | JGI25162J39368_1003818 | |||
| 280 | JGI25152J39213_1000017 | |||
| 281 | JGI25150J39212_1000001 | |||
| 282 | JGI25151J46595_10000001 | |||
| 283 | JGI25165J46597_1000615 | |||
| 284 | JGI25153J46596_10000053 | |||
| 285 | rootH1_10013649 | |||
| 286 | rootH2_10002594 | |||
| 287 | rootH2_10021891 | |||
| 288 | rootH2_10234976 | |||
| 289 | rootH1_10018482 | |||
| 290 | Ga0055536_1000001 | |||
| 291 | Ga0055530_10001706 | |||
| 292 | Ga0065714_10002285 | |||
| 293 | Ga0065714_10003407 | |||
| 294 | Ga0065714_10003544 | |||
| 295 | Ga0065714_10004468 | |||
| 296 | Ga0065704_10070465 | |||
| 297 | Ga0065704_10074161 | |||
| 298 | Ga0070658_10000018 | |||
| 299 | Ga0070676_10003389 | |||
| 300 | Ga0068868_100011794 | |||
| 301 | Ga0070660_100008700 | |||
| 302 | Ga0070660_100070708 | |||
| 303 | Ga0070673_100007775 | |||
| 304 | Ga0070659_100000899 | |||
| 305 | Ga0070678_100005532 | |||
| 306 | Ga0070662_100000954 | |||
| 307 | Ga0070681_10041629 | |||
| 308 | Ga0070684_100007243 | |||
| 309 | Ga0068853_100021212 | |||
| 310 | Ga0070665_100000072 | |||
| 311 | Ga0068855_100000090 | |||
| 312 | Ga0068855_100000268 | |||
| 313 | Ga0068855_100024800 | |||
| 314 | Ga0068855_100044636 | |||
| 315 | Ga0068855_100154803 | |||
| 316 | Ga0068857_100036578 | |||
| 317 | Ga0068856_100000897 | |||
| 318 | Ga0068856_100002063 | |||
| 319 | Ga0068856_100130751 | |||
| 320 | Ga0068852_100000143 | |||
| 321 | Ga0068858_100060682 | |||
| 322 | Ga0075366_10001407 | |||
| 323 | Ga0097621_100000028 | |||
| 324 | Ga0068871_100000066 | |||
| 325 | Ga0068865_100000732 | |||
| 326 | Ga0105240_10000876 | |||
| 327 | Ga0105240_10021397 | |||
| 328 | Ga0105240_10133914 | |||
| 329 | Ga0105240_10180841 | |||
| 330 | Ga0105243_10000004 | |||
| 331 | Ga0105241_10003705 | |||
| 332 | Ga0105237_10000233 | |||
| 333 | Ga0105237_10000485 | |||
| 334 | Ga0105237_10004544 | |||
| 335 | Ga0105237_10005769 | |||
| 336 | Ga0105238_10033079 | |||
| 337 | Ga0105238_10039641 | |||
| 338 | Ga0105239_10000039 | |||
| 339 | Ga0105239_10000120 | |||
| 340 | Ga0105239_10001068 | |||
| 341 | Ga0105239_10002256 | |||
| 342 | Ga0105239_10004588 | |||
| 343 | Ga0105239_10140015 | |||
| 344 | Ga0105239_10142246 | |||
| 345 | Ga0105246_10092820 | |||
| 346 | Ga0157373_10000031 | |||
| 347 | Ga0157373_10003403 | |||
| 348 | Ga0157373_10004725 | |||
| 349 | Ga0157373_10049976 | |||
| 350 | Ga0157371_10000021 | |||
| 351 | Ga0157371_10000251 | |||
| 352 | Ga0157371_10001069 | |||
| 353 | Ga0157371_10001458 | |||
| 354 | Ga0157371_10005834 | |||
| 355 | Ga0157370_10000296 | |||
| 356 | Ga0157370_10007900 | |||
| 357 | Ga0157370_10008402 | |||
| 358 | Ga0157370_10047332 | |||
| 359 | Ga0157370_10047392 | |||
| 360 | Ga0157370_10051317 | |||
| 361 | Ga0157370_10077177 | |||
| 362 | Ga0157370_10085486 | |||
| 363 | Ga0157369_10000008 | |||
| 364 | Ga0157369_10001443 | |||
| 365 | Ga0157374_10000174 | |||
| 366 | Ga0157374_10000451 | |||
| 367 | Ga0157374_10058518 | |||
| 368 | Ga0163162_10000010 | |||
| 369 | Ga0163162_10000206 | |||
| 370 | Ga0157372_10000050 | |||
| 371 | Ga0157372_10000266 | |||
| 372 | Ga0157372_10007808 | |||
| 373 | Ga0157372_10131432 | |||
| 374 | Ga0157372_10172197 | |||
| 375 | Ga0157375_10012681 | |||
| 376 | Ga0157375_10059429 | |||
| 377 | Ga0182008_10000008 | |||
| 378 | Ga0182008_10000259 | |||
| 379 | Ga0182006_1000091 | |||
| 380 | Ga0182006_1000477 | |||
| 381 | Ga0182006_1001551 | |||
| 382 | Ga0182006_1003438 | |||
| 383 | Ga0182007_10000003 | |||
| 384 | Ga0183373_1001 | |||
| 385 | Ga0163161_10000480 | |||
| 386 | Ga0163161_10001945 | |||
| 387 | Ga0163161_10007989 | |||
| 388 | Ga0163161_10010064 | |||
| 389 | Ga0207427_100172 | |||
| 390 | Ga0209437_100024 | |||
| 391 | Ga0209437_100034 | |||
| 392 | Ga0207425_1000002 | |||
| 393 | Ga0209026_1000219 | |||
| 394 | Ga0209026_1006379 | |||
| 395 | Ga0209129_1000002 | |||
| 396 | Ga0209233_1000038 | |||
| 397 | Ga0209233_1004334 | |||
| 398 | Ga0209455_1002840 | |||
| 399 | Ga0209676_1000008 | |||
| 400 | Ga0209025_1000004 | |||
| 401 | Ga0209758_1000006 | |||
| 402 | Ga0209050_1000045 | |||
| 403 | Ga0207647_10000662 | |||
| 404 | Ga0207645_10001390 | |||
| 405 | Ga0207705_10000036 | |||
| 406 | Ga0207707_10040640 | |||
| 407 | Ga0207695_10000013 | |||
| 408 | Ga0207695_10002721 | |||
| 409 | Ga0207695_10136220 | |||
| 410 | Ga0207671_10000663 | |||
| 411 | Ga0207671_10005404 | |||
| 412 | Ga0207671_10012094 | |||
| 413 | Ga0207671_10014472 | |||
| 414 | Ga0207657_10046656 | |||
| 415 | Ga0207652_10013689 | |||
| 416 | Ga0207694_10003884 | |||
| 417 | Ga0207694_10126771 | |||
| 418 | Ga0207690_10000594 | |||
| 419 | Ga0207706_10001262 | |||
| 420 | Ga0207709_10000010 | |||
| 421 | Ga0207704_10000044 | |||
| 422 | Ga0207667_10000009 | |||
| 423 | Ga0207667_10000971 | |||
| 424 | Ga0207667_10020086 | |||
| 425 | Ga0207667_10200458 | |||
| 426 | Ga0207651_10001871 | |||
| 427 | Ga0207703_10083920 | |||
| 428 | Ga0207639_10010971 | |||
| 429 | Ga0207702_10000797 | |||
| 430 | Ga0207702_10004560 | |||
| 431 | Ga0207648_10000529 | |||
| 432 | Ga0207674_10047681 | |||
| 433 | Ga0207683_10082956 | |||
| 434 | Ga0207698_10001299 | |||
| 435 | Ga0268266_10000089 | |||
| 436 | Ga0307517_10010238 | |||
| 437 | Ga0307515_10001997 | |||
| 438 | Ga0307515_10002629 | |||
| 439 | Ga0307515_10089089 | |||
| 440 | Ga0316176_1083685 | |||
| 441 | Ga0316183_1116149 | |||
| 442 | Ga0316181_1062473 | |||
| 443 | Ga0307408_100000143 | |||
| 444 | Ga0307408_100000672 | |||
| 445 | Ga0307408_100007095 | |||
| 446 | Ga0307405_10000042 | |||
| 447 | Ga0307407_10000022 | |||
| 448 | Ga0307412_10000023 | |||
| 449 | Ga0307412_10005395 | |||
| 450 | Ga0307416_100000047 | |||
| 451 | Ga0307414_10000274 | |||
| 452 | Ga0307414_10002063 | |||
| 453 | Ga0307414_10004058 | |||
| 454 | Ga0307414_10021617 | |||
| 455 | Ga0307414_10160865 | |||
| 456 | Ga0307507_10000015 | |||
| 457 | Ga0395899_0000002 | |||
| 458 | Ga0395899_0000640 | |||
| 459 | Ga0395899_0006330 | |||
| 460 | Ga0395899_0012806 | |||
| 461 | Ga0395900_0000277 | |||
| 462 | Ga0395900_0001234 | |||
| 463 | Ga0395900_0006335 | |||
| 464 | Ga0395898_0001918 | |||
| 465 | Ga0395905_0000068 | |||
| 466 | Ga0395905_0000727 | |||
| 467 | Ga0395901_0000199 | |||
| 468 | Ga0395901_0004520 | |||
| 469 | Ga0436361_1082824 | |||
| 470 | Ga0466969_0010399 | |||
| 471 | Ga0466961_0066686 | |||
| 472 | Ga0495650_0000087 | |||
| 473 | Ga0495585_0000286 | |||
| 474 | Ga0495585_0000553 | |||
| 475 | Ga0495606_0000052 | |||
| 476 | Ga0495606_0071592 | |||
| 477 | Ga0495606_0072679 | |||
| 478 | Ga0495610_0002045 | |||
| 479 | Ga0495610_0014382 | |||
| 480 | Ga0495616_0005378 | |||
| 481 | Ga0495616_0010475 | |||
| 482 | Ga0495648_0001785 | |||
| 483 | Ga0495652_0101987 | |||
| 484 | Ga0495633_0000035 | |||
| 485 | Ga0495633_0003276 | |||
| 486 | Ga0495668_0000032 | |||
| 487 | Ga0495625_0000008 | |||
| 488 | Ga0495625_0000753 | |||
| 489 | Ga0495625_0001038 | |||
| 490 | Ga0495625_0019264 | |||
| 491 | Ga0495649_0000018 | |||
| 492 | Ga0495687_000484 | |||
| 493 | Ga0495687_003823 | |||
| 494 | Ga0495686_0000052 | |||
| 495 | Ga0496116_0008863 | |||
| 496 | Ga0496117_0003761 | |||
| 497 | Ga0496122_0012868 | |||
| 498 | Ga0496123_0015016 | |||
| 499 | Ga0496123_0015103 | |||
| 500 | nmdc:mga0k408_3024_c1 | |||
| 501 | nmdc:mga0k408_979_c1 | |||
| 502 | Ga0500635_0000409 | |||
| 503 | Ga0500651_0000111 | |||
| 504 | Ga0500618_000037 | |||
| 505 | Ga0500622_0002943 | |||
| 506 | Ga0500624_000572 | |||
| 507 | 2586209047 | |||
| 508 | 2599478317 | |||
| 509 | 2722727449 | |||
| 510 | 2738757378 | |||
| 511 | 2738760485 | |||
| 512 | 2738855623 | |||
| 513 | 2739300725 | |||
| 514 | 2739590505 | |||
| 515 | 2739617252 | |||
| 516 | 2739647511 | |||
| 517 | 2776612609 | |||
| 518 | 2819549301 | |||
| 519 | 2842724818 | |||
| 520 | 2842904030 | |||
| 521 | 2842913162 | |||
| 522 | 2849286931 | |||
| 523 | 2852626901 | |||
| 524 | 2852630503 | |||
| 525 | 2857631253 | |||
| 526 | 2884938048 | |||
| 527 | 2890737920 | |||
| 528 | 2896320063 | |||
| 529 | 2896344682 | |||
| 530 | 2898714896 | |||
| 531 | 2902051812 | |||
| 532 | 2904448306 | |||
| 533 | 2904781781 | |||
| 534 | 2911141350 | |||
| 535 | 2919181539 | |||
| 536 | 2919189760 | |||
| 537 | 2919439002 | |||
| 538 | 2928080633 | |||
| 539 | 2928150857 | |||
| 540 | 2932082983 | |||
| 541 | 2939667985 | |||
| 542 | 2946001806 | |||
| 543 | 2954018641 | |||
| 544 | 2977236247 | |||
| 545 | 3003237363 | |||
| 546 | 8055589612 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1m65-assembly1.cif.gz_A | ycdx protein | 0.8548 | 322 | 557 |
| 1pb0-assembly1.cif.gz_A | ycdx protein in autoinhibited state | 0.839 | 322 | 557 |
| 1pb0-assembly1.cif.gz_C | ycdx protein in autoinhibited state | 0.8219 | 322 | 557 |
| 1m65-assembly1.cif.gz_A | ycdx protein | 0.8107 | 322 | 557 |
| 1pb0-assembly1.cif.gz_A | ycdx protein in autoinhibited state | 0.7942 | 322 | 557 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FZD4_322_570_3.20.20.140 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9747 | 315 | 557 | 3.20.20.140 |
| 2w9mA05 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9699 | 314 | 559 | 3.20.20.140 |
| 3au6A05 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9639 | 312 | 555 | 3.20.20.140 |
| 3au6A05 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases | 0.9524 | 312 | 555 | 3.20.20.140 |
| 2w9mB02 | Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain | 0.9503 | 86 | 151 | 1.10.150.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3C2Z7-F1-model_v4 | PHP domain-containing protein | 0.9919 | 347 | 560 |
GO:0005829
GO:0008270 GO:0042578 GO:0071978 |
| AF-A0A3D3CWE4-F1-model_v4 | Histidinol-phosphatase | 0.9901 | 279 | 555 |
GO:0005829
GO:0008270 GO:0042578 GO:0071978 |
| AF-A0A519VLB8-F1-model_v4 | DNA polymerase/3'-5' exonuclease PolX | 0.99 | 1 | 94 |
GO:0004527
|
| AF-A0A7C3XT46-F1-model_v4 | PHP domain-containing protein | 0.9892 | 356 | 558 |
GO:0005829
GO:0008270 GO:0042578 GO:0071978 |
| AF-A0A520BUP2-F1-model_v4 | DNA polymerase/3'-5' exonuclease PolX | 0.989 | 1 | 113 |
GO:0003677
GO:0003887 GO:0004527 GO:0006281 |