F379250

General Info

Members Datasets Scaffolds Average Seq Length
273 227 216 207

Family's Representative Sequence

Representative Sequence 3300046660|Ga0495625_0000876|Ga0495625_0000876_5452_6156
Length 234
Sequence METIGECGRIEPRVWAPFSLRRTPMPDPTSLFAFALLAFGMVLMPGPNMAYLISRSICQGWAAGLISLGGVALGFVFYMLCAAFGITALVLAVPYAYDAVRLVGALYLLWLAWQAVRPGGRSPFQVRDLPRDSPRKLFLMGFLTNLLNPKIAVMYLSLLPQFIDPTIGQVFAQSLLLGMTQIVISVCVNAIIAVSAGSIAGFLIRRPSFAVVQRWVMGTVLASLAVRMATEARR

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
3 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
4 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
5 2643221557 Ensifer sp. Root558 Isolate Unclassified
6 2643221559 Lysobacter sp. Root559 Isolate Unclassified
7 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
8 2643221573 Lysobacter sp. Root604 Isolate Unclassified
9 2643221586 Lysobacter sp. Root667 Isolate Unclassified
10 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
11 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
12 2643221610 Ensifer sp. Root74 Isolate Unclassified
13 2643221612 Lysobacter sp. Root76 Isolate Unclassified
14 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
15 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
16 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
17 2643221668 Ensifer sp. Root423 Isolate Unclassified
18 2643221675 Ensifer sp. Root1298 Isolate Unclassified
19 2643221680 Ensifer sp. Root1312 Isolate Unclassified
20 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
21 2643221720 Lysobacter sp. Root916 Isolate Unclassified
22 2643221726 Ensifer sp. Root954 Isolate Unclassified
23 2643221727 Lysobacter sp. Root96 Isolate Unclassified
24 2643221728 Lysobacter sp. Root983 Isolate Unclassified
25 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
26 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
27 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
28 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
29 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
30 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
31 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
32 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
33 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
34 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
35 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
36 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
37 2908669403 Pantoea coffeiphila 1480 Isolate Rhizosphere
38 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
39 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
40 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
41 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
42 2920822456 Ensifer sesbaniae CCBAU 65729 Isolate Unclassified
43 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
44 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
45 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
46 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
47 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
48 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
49 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
50 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
51 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
52 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
53 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
54 3300000652 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA Metagenome Rhizosphere
55 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
56 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
57 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
58 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
59 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
60 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
61 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
62 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
63 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
64 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
65 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
66 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
67 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
68 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
69 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
70 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
71 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
72 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
73 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
74 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
75 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
76 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
77 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
78 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
79 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
80 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
81 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
82 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
83 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
84 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
85 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
86 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
87 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
88 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
89 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
90 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
91 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
92 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
93 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
94 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
95 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
96 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
97 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
98 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
99 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
100 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
101 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
102 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
103 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
104 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
105 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
106 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
107 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
108 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
109 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
110 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
111 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
112 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
113 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
114 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
116 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
117 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
118 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
119 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
120 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
121 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
122 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
124 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
125 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
126 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
127 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
129 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
152 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
155 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
156 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
157 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
158 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
159 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
160 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
161 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
162 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
163 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
164 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
165 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
166 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
167 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
168 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
169 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
170 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
171 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
172 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
173 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
174 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
175 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
176 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
177 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
178 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
179 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
180 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
181 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
182 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
183 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
184 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
185 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
186 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
187 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
188 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
189 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
190 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
191 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
192 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
193 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
194 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
195 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
196 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
197 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
198 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
199 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
200 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
201 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
202 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
203 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
204 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
205 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
206 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
207 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
208 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
209 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
210 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
211 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
212 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
213 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
214 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
215 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
216 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
217 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
218 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
219 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
220 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
221 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
222 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
223 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
224 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
225 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
226 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
227 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 79.12
Metatranscriptomes 0
Isolates 20.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.38
Nodule 3.3
Rhizoplane 0.73
Rhizosphere 56.04
Stem 0
Stem Tuber 0
Unclassified 24.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 ARcpr5oldR_c001237 3300000041 Bacteria 2611
2 ARcpr5yngRDRAFT_c003200 3300000043 Bacteria 1634
3 ARCol0yngRDRAFT_1003023 3300000652 Bacteria 1243
4 JGI25156J39149_1000238 3300002705 Bacteria 37951
5 JGI25162J39368_1000244 3300002737 Bacteria 54424
6 JGI25154J39366_1000104 3300002738 Bacteria 74407
7 JGI25157J39369_1000270 3300002741 Bacteria 37955
8 JGI25165J46597_1000553 3300003214 Bacteria 34037
9 JGI25153J46596_10000890 3300003215 Bacteria 18151
10 JGI25153J46596_10003822 3300003215 Bacteria 8301
11 rootH1_10140928 3300003316 Bacteria 1398
12 rootL2_10000334 3300003322 Bacteria 40843
13 Ga0055537_1000859 3300003773 Bacteria 14743
14 Ga0055524_1000103 3300003775 Bacteria 105196
15 Ga0055528_1048117 3300003790 Bacteria 884
16 Ga0055531_10014548 3300003794 Bacteria 3535
17 Ga0065165_1008702 3300005262 Bacteria 4693
18 Ga0065704_10071708 3300005289 Bacteria 10184
19 Ga0070658_10739294 3300005327 Bacteria 854
20 Ga0070670_100030182 3300005331 Bacteria 4669
21 Ga0070666_10002143 3300005335 Bacteria 12003
22 Ga0068868_100164767 3300005338 Bacteria 1833
23 Ga0070660_100340295 3300005339 Bacteria 1234
24 Ga0070661_100008209 3300005344 Bacteria 7202
25 Ga0070668_100012502 3300005347 Bacteria 6324
26 Ga0070671_100174795 3300005355 Bacteria 1817
27 Ga0070663_100028643 3300005455 Bacteria 3795
28 Ga0070678_100004535 3300005456 Bacteria 7887
29 Ga0068867_100141846 3300005459 Bacteria 1879
30 Ga0068853_100977621 3300005539 Bacteria 814
31 Ga0070665_100000750 3300005548 Bacteria 43057
32 Ga0068857_100596628 3300005577 Bacteria 1044
33 Ga0068854_100007220 3300005578 Bacteria 7094
34 Ga0068854_100281475 3300005578 Bacteria 1339
35 Ga0068852_100205550 3300005616 Bacteria 1865
36 Ga0068852_101366931 3300005616 Bacteria 730
37 Ga0068851_10019661 3300005834 Bacteria 3265
38 Ga0068863_101136584 3300005841 Bacteria 786
39 Ga0068858_100000339 3300005842 Bacteria 49598
40 Ga0068860_100169705 3300005843 Bacteria 2107
41 Ga0081539_10212955 3300005985 Bacteria 884
42 Ga0075369_10242231 3300006186 Bacteria 836
43 Ga0097621_100336316 3300006237 Bacteria 1340
44 Ga0079104_1018642 3300006946 Bacteria 1962
45 Ga0105244_10071421 3300009036 Bacteria 1731
46 Ga0105240_10020067 3300009093 Bacteria 8922
47 Ga0105240_10050519 3300009093 Bacteria 5242
48 Ga0105241_10039756 3300009174 Bacteria 3549
49 Ga0105237_10020301 3300009545 Bacteria 6853
50 Ga0105237_10217165 3300009545 Bacteria 1912
51 Ga0105237_10248383 3300009545 Bacteria 1781
52 Ga0105237_10490592 3300009545 Bacteria 1235
53 Ga0105238_10017900 3300009551 Bacteria 7204
54 Ga0105249_10007988 3300009553 Bacteria 9224
55 Ga0157373_10008825 3300013100 Bacteria 7468
56 Ga0157373_10215933 3300013100 Bacteria 1353
57 Ga0157371_10011043 3300013102 Bacteria 6996
58 Ga0157371_10054272 3300013102 Bacteria 2846
59 Ga0157370_10005708 3300013104 Bacteria 13911
60 Ga0157369_10023111 3300013105 Bacteria 6928
61 Ga0157369_10047610 3300013105 Bacteria 4654
62 Ga0171463_1001 3300013249 Bacteria 1406070
63 Ga0157374_10000123 3300013296 Bacteria 70359
64 Ga0157372_10079048 3300013307 Bacteria 3718
65 Ga0157372_10138796 3300013307 Bacteria 2800
66 Ga0182008_10077820 3300014497 Bacteria 1632
67 Ga0157379_10278565 3300014968 Bacteria 1522
68 Ga0157376_10135070 3300014969 Bacteria 2206
69 Ga0182006_1028097 3300015261 Bacteria 2290
70 Ga0182006_1033138 3300015261 Bacteria 2072
71 Ga0182007_10064810 3300015262 Bacteria 1197
72 Ga0183363_1108 3300015690 Bacteria 23177
73 Ga0213872_10028940 3300021361 Bacteria 2541
74 Ga0209435_100065 3300025206 Bacteria 74485
75 Ga0209672_100997 3300025228 Bacteria 12401
76 Ga0209437_100050 3300025233 Bacteria 394010
77 Ga0207425_1004373 3300025245 Bacteria 4265
78 Ga0209646_1000195 3300025246 Bacteria 74485
79 Ga0209646_1007316 3300025246 Bacteria 1808
80 Ga0209026_1000235 3300025250 Bacteria 74485
81 Ga0209759_1000268 3300025256 Bacteria 74485
82 Ga0209759_1001757 3300025256 Bacteria 11112
83 Ga0209233_1000037 3300025261 Bacteria 554620
84 Ga0209233_1004961 3300025261 Bacteria 4472
85 Ga0209565_1000011 3300025263 Bacteria 637062
86 Ga0209455_1014461 3300025272 Bacteria 1785
87 Ga0209673_1005383 3300025273 Bacteria 6457
88 Ga0209675_1002124 3300025291 Bacteria 10467
89 Ga0209564_1037065 3300025295 Bacteria 1380
90 Ga0209758_1000008 3300025297 Bacteria 1215263
91 Ga0209758_1011591 3300025297 Bacteria 5078
92 Ga0209050_1003093 3300025298 Bacteria 12785
93 Ga0209256_1000016 3300025299 Bacteria 599092
94 Ga0209256_1000027 3300025299 Bacteria 423283
95 Ga0207656_10012555 3300025321 Bacteria 3224
96 Ga0207647_10000060 3300025904 Bacteria 84009
97 Ga0207647_10000257 3300025904 Bacteria 43652
98 Ga0207654_10404743 3300025911 Bacteria 949
99 Ga0207695_10014478 3300025913 Bacteria 9336
100 Ga0207695_10025533 3300025913 Bacteria 6612
101 Ga0207695_10056403 3300025913 Bacteria 4087
102 Ga0207671_10080511 3300025914 Bacteria 2441
103 Ga0207671_10284104 3300025914 Bacteria 1305
104 Ga0207657_10000187 3300025919 Bacteria 64305
105 Ga0207694_10001064 3300025924 Bacteria 23871
106 Ga0207694_10187652 3300025924 Bacteria 1678
107 Ga0207650_10019620 3300025925 Bacteria 4753
108 Ga0207664_10000047 3300025929 Bacteria 139122
109 Ga0207709_10016229 3300025935 Bacteria 4139
110 Ga0207712_10000348 3300025961 Bacteria 41202
111 Ga0207668_10003281 3300025972 Bacteria 9487
112 Ga0207640_10000702 3300025981 Bacteria 19468
113 Ga0207640_10270860 3300025981 Bacteria 1328
114 Ga0207640_10710415 3300025981 Bacteria 863
115 Ga0207703_10000349 3300026035 Bacteria 49609
116 Ga0207639_10000239 3300026041 Bacteria 41189
117 Ga0207678_10005786 3300026067 Bacteria 11022
118 Ga0207702_10093144 3300026078 Bacteria 2642
119 Ga0207702_10107758 3300026078 Bacteria 2471
120 Ga0207702_10589668 3300026078 Bacteria 1090
121 Ga0207648_10173407 3300026089 Bacteria 1907
122 Ga0207676_10778891 3300026095 Bacteria 932
123 Ga0207674_10198134 3300026116 Bacteria 1958
124 Ga0207683_10019193 3300026121 Bacteria 5838
125 Ga0207698_10015887 3300026142 Bacteria 5059
126 Ga0209281_1010105 3300027111 Bacteria 2178
127 Ga0268266_10000007 3300028379 Bacteria 1372921
128 Ga0268264_10140940 3300028381 Bacteria 2150
129 Ga0307511_10001356 3300030521 Bacteria 25940
130 Ga0265330_10061945 3300031235 Bacteria 1627
131 Ga0265314_10066496 3300031711 Bacteria 2431
132 Ga0307412_10001115 3300031911 Bacteria 15405
133 Ga0307414_10022196 3300032004 Bacteria 3999
134 Ga0307414_10022408 3300032004 Bacteria 3982
135 Ga0307414_10873682 3300032004 Bacteria 823
136 Ga0373947_0088151 3300035725 Bacteria 1931
137 Ga0373925_0006737 3300037068 Bacteria 8422
138 Ga0395900_0000262 3300037418 Bacteria 81738
139 Ga0395900_0857886 3300037418 Bacteria 833
140 Ga0395898_0015838 3300037466 Bacteria 7726
141 Ga0395905_0025333 3300037471 Bacteria 5593
142 Ga0436364_0405070 3300037853 Bacteria 1461
143 Ga0395901_0267448 3300038443 Bacteria 1779
144 Ga0395901_0369283 3300038443 Bacteria 1478
145 Ga0436361_0558563 3300039447 Bacteria 8020
146 Ga0436363_1363642 3300039450 Unclassified 1454
147 Ga0439436_0000552 3300041404 Bacteria 9870
148 Ga0439438_056277 3300041405 Bacteria 991
149 Ga0439439_0001510 3300041406 Bacteria 4661
150 Ga0439453_0005027 3300041408 Bacteria 1997
151 Ga0439448_0002598 3300042005 Bacteria 4920
152 Ga0439449_0070376 3300042007 Bacteria 1289
153 Ga0450911_000405 3300042115 Bacteria 14234
154 Ga0439464_0005066 3300042439 Bacteria 3389
155 Ga0466969_0000373 3300044656 Bacteria 24574
156 Ga0466965_0013387 3300044683 Bacteria 3871
157 Ga0466966_0000163 3300044684 Bacteria 43388
158 Ga0466966_0017666 3300044684 Bacteria 4711
159 Ga0466961_0031305 3300044693 Bacteria 3420
160 Ga0466963_0066743 3300044694 Bacteria 2414
161 Ga0466971_0000723 3300044719 Bacteria 13194
162 Ga0466971_0062418 3300044719 Bacteria 1686
163 Ga0466970_0007948 3300044765 Bacteria 5325
164 Ga0466970_0014245 3300044765 Bacteria 4080
165 Ga0466957_0002462 3300044842 Bacteria 9945
166 Ga0466957_0053469 3300044842 Bacteria 2462
167 Ga0466959_0000071 3300045049 Bacteria 68513
168 Ga0466959_0004844 3300045049 Bacteria 9098
169 Ga0466959_0032063 3300045049 Bacteria 3889
170 Ga0466958_0022755 3300045836 Bacteria 3673
171 Ga0466967_0342465 3300045976 Bacteria 1446
172 Ga0495651_0329490 3300046462 Bacteria 1015
173 Ga0495664_0123842 3300046477 Bacteria 1564
174 Ga0495663_0011787 3300046525 Bacteria 2434
175 Ga0495625_0000876 3300046660 Bacteria 40885
176 Ga0495599_0117975 3300046678 Bacteria 1650
177 Ga0495623_0200405 3300046679 Bacteria 1148
178 Ga0495646_0109091 3300046680 Bacteria 1577
179 Ga0495686_0034700 3300047472 Bacteria 3247
180 Ga0496106_0000283 3300048909 Bacteria 35818
181 Ga0496116_0003671 3300048919 Bacteria 15052
182 Ga0496117_0058914 3300048920 Bacteria 2656
183 Ga0496118_0013223 3300048921 Bacteria 7827
184 Ga0496119_0458200 3300048922 Bacteria 599
185 Ga0496121_0004899 3300048924 Bacteria 17568
186 Ga0496121_0013157 3300048924 Bacteria 8925
187 Ga0496121_0096024 3300048924 Bacteria 2301
188 Ga0496123_0012374 3300048926 Bacteria 7283
189 Ga0496123_0100730 3300048926 Bacteria 1682
190 Ga0496124_0023609 3300048927 Bacteria 5611
191 Ga0496124_0068431 3300048927 Bacteria 2951
192 Ga0496124_0373141 3300048927 Bacteria 1000
193 Ga0496125_0020223 3300048928 Bacteria 6253
194 Ga0496125_0528801 3300048928 Bacteria 658
195 Ga0501034_0437959 3300049571 Bacteria 1226
196 Ga0501257_071173 3300049686 Bacteria 889
197 Ga0501044_0068793 3300049823 Bacteria 3606
198 Ga0500643_015834 3300053087 Bacteria 2574
199 Ga0500643_020113 3300053087 Bacteria 2188
200 Ga0500644_0016550 3300053088 Bacteria 2124
201 Ga0500641_0014446 3300053096 Bacteria 2915
202 Ga0500556_0005716 3300053104 Bacteria 3518
203 Ga0500562_002757 3300053108 Bacteria 4369
204 Ga0500593_055503 3300053117 Bacteria 1750
205 Ga0500568_0004460 3300053139 Bacteria 7475
206 Ga0500616_0020014 3300053153 Bacteria 3763
207 Ga0500616_0148388 3300053153 Bacteria 1088
208 Ga0500622_0000846 3300053156 Bacteria 26191
209 Ga0500624_000048 3300053157 Bacteria 82685
210 Ga0500627_0026731 3300053158 Bacteria 2385
211 Ga0500636_0020496 3300053177 Bacteria 3916
212 Ga0500637_0027042 3300053178 Bacteria 3164
213 Ga0500645_000184 3300053730 Bacteria 48312
214 Ga0500645_055452 3300053730 Bacteria 1151
215 Ga0466962_0000496 3300061719 Bacteria 17076
216 Ga0466962_0044149 3300061719 Bacteria 2132

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025911 Ga0207654_10404743 Ga0207654_104047432 160
2 3300048922 Ga0496119_0458200 Ga0496119_0458200_24_587 175
3 3300005985 Ga0081539_10212955 Ga0081539_102129551 188
4 3300045049 Ga0466959_0004844 Ga0466959_0004844_4621_5223 194
5 3300048909 Ga0496106_0000283 Ga0496106_0000283_23810_24394 194
6 3300048924 Ga0496121_0004899 Ga0496121_0004899_5972_6556 194
7 3300048927 Ga0496124_0068431 Ga0496124_0068431_59_643 194
8 3300048928 Ga0496125_0528801 Ga0496125_0528801_43_627 194
9 3300053088 Ga0500644_0016550 Ga0500644_0016550_791_1375 194
10 3300053156 Ga0500622_0000846 Ga0500622_0000846_19752_20336 194
11 3300061719 Ga0466962_0044149 Ga0466962_0044149_35_625 194
12 3300030521 Ga0307511_10001356 Ga0307511_1000135614 197
13 3300005578 Ga0068854_100281475 Ga0068854_1002814752 198
14 3300013105 Ga0157369_10023111 Ga0157369_100231115 198
15 3300025981 Ga0207640_10270860 Ga0207640_102708602 198
16 3300048919 Ga0496116_0003671 Ga0496116_0003671_266_901 198
17 3300053178 Ga0500637_0027042 Ga0500637_0027042_890_1525 198
18 3300005347 Ga0070668_100012502 Ga0070668_1000125021 199
19 3300005456 Ga0070678_100004535 Ga0070678_1000045352 199
20 3300006186 Ga0075369_10242231 Ga0075369_102422311 199
21 3300009036 Ga0105244_10071421 Ga0105244_100714211 199
22 3300013102 Ga0157371_10054272 Ga0157371_100542724 199
23 3300015262 Ga0182007_10064810 Ga0182007_100648102 199
24 3300025935 Ga0207709_10016229 Ga0207709_100162292 199
25 3300025972 Ga0207668_10003281 Ga0207668_100032814 199
26 3300026121 Ga0207683_10019193 Ga0207683_100191937 199
27 3300031911 Ga0307412_10001115 Ga0307412_100011152 199
28 3300032004 Ga0307414_10022408 Ga0307414_100224084 199
29 3300042115 Ga0450911_000405 Ga0450911_000405_12147_12782 199
30 3300046525 Ga0495663_0011787 Ga0495663_0011787_226_861 199
31 3300048920 Ga0496117_0058914 Ga0496117_0058914_1511_2146 199
32 3300048921 Ga0496118_0013223 Ga0496118_0013223_364_999 199
33 3300048924 Ga0496121_0013157 Ga0496121_0013157_8069_8704 199
34 3300048924 Ga0496121_0096024 Ga0496121_0096024_1470_2105 199
35 3300048926 Ga0496123_0012374 Ga0496123_0012374_3258_3893 199
36 3300048927 Ga0496124_0373141 Ga0496124_0373141_222_857 199
37 3300048928 Ga0496125_0020223 Ga0496125_0020223_5369_6004 199
38 3300009545 Ga0105237_10217165 Ga0105237_102171652 200
39 3300025914 Ga0207671_10284104 Ga0207671_102841042 200
40 3300044656 Ga0466969_0000373 Ga0466969_0000373_16677_17297 201
41 3300044684 Ga0466966_0000163 Ga0466966_0000163_29957_30577 201
42 3300044693 Ga0466961_0031305 Ga0466961_0031305_140_760 201
43 3300044719 Ga0466971_0000723 Ga0466971_0000723_12174_12794 201
44 3300044765 Ga0466970_0014245 Ga0466970_0014245_1130_1750 201
45 3300044842 Ga0466957_0002462 Ga0466957_0002462_1599_2219 201
46 3300045049 Ga0466959_0000071 Ga0466959_0000071_4476_5096 201
47 3300045836 Ga0466958_0022755 Ga0466958_0022755_1008_1628 201
48 3300061719 Ga0466962_0000496 Ga0466962_0000496_11098_11718 201
49 3300032004 Ga0307414_10873682 Ga0307414_108736822 204
50 3300046462 Ga0495651_0329490 Ga0495651_0329490_223_861 204
51 3300046477 Ga0495664_0123842 Ga0495664_0123842_746_1384 204
52 3300046678 Ga0495599_0117975 Ga0495599_0117975_616_1254 204
53 3300046679 Ga0495623_0200405 Ga0495623_0200405_45_683 204
54 3300053087 Ga0500643_015834 Ga0500643_015834_1866_2480 204
55 3300053104 Ga0500556_0005716 Ga0500556_0005716_1970_2584 204
56 3300053108 Ga0500562_002757 Ga0500562_002757_678_1292 204
57 3300053153 Ga0500616_0020014 Ga0500616_0020014_2278_2892 204
58 iso_pu_bacteria 2818991449 2819618501 205
59 iso_pu_bacteria 2883577096 2883579469 205
60 iso_pu_bacteria 2908669403 2908671396 205
61 iso_pu_bacteria 2920760137 2920763756 205
62 iso_pu_bacteria 2508501050 2508725326 206
63 iso_pu_bacteria 2582581315 2585326297 206
64 iso_pu_bacteria 2615840698 2616556233 206
65 iso_pu_bacteria 2643221557 2643805918 206
66 iso_pu_bacteria 2643221559 2643815764 206
67 iso_pu_bacteria 2643221563 2643835620 206
68 iso_pu_bacteria 2643221573 2643878109 206
69 iso_pu_bacteria 2643221586 2643940731 206
70 iso_pu_bacteria 2643221598 2643999252 206
71 iso_pu_bacteria 2643221608 2644056546 206
72 iso_pu_bacteria 2643221610 2644066094 206
73 iso_pu_bacteria 2643221612 2644080222 206
74 iso_pu_bacteria 2643221614 2644085636 206
75 iso_pu_bacteria 2643221661 2644343187 206
76 iso_pu_bacteria 2643221666 2644366487 206
77 iso_pu_bacteria 2643221668 2644377178 206
78 iso_pu_bacteria 2643221675 2644417425 206
79 iso_pu_bacteria 2643221680 2644450821 206
80 iso_pu_bacteria 2643221689 2644498855 206
81 iso_pu_bacteria 2643221720 2644659418 206
82 iso_pu_bacteria 2643221726 2644692756 206
83 iso_pu_bacteria 2643221727 2644695818 206
84 iso_pu_bacteria 2643221728 2644700837 206
85 iso_pu_bacteria 2667528174 2671113982 206
86 iso_pu_bacteria 2687453129 2687578147 206
87 iso_pu_bacteria 2838029111 2838029613 206
88 iso_pu_bacteria 2842475841 2842475957 206
89 iso_pu_bacteria 2842502639 2842503141 206
90 iso_pu_bacteria 2842698319 2842698763 206
91 iso_pu_bacteria 2852680915 2852683551 206
92 iso_pu_bacteria 2861691609 2861695921 206
93 iso_pu_bacteria 2874220319 2874223899 206
94 iso_pu_bacteria 2894023352 2894025431 206
95 iso_pu_bacteria 2919046199 2919050815 206
96 iso_pu_bacteria 2919089067 2919090160 206
97 iso_pu_bacteria 2919408235 2919408477 206
98 iso_pu_bacteria 2920822456 2920822947 206
99 iso_pu_bacteria 2928496128 2928498129 206
100 iso_pu_bacteria 2929189879 2929194396 206
101 iso_pu_bacteria 2929199973 2929202004 206
102 iso_pu_bacteria 2937610967 2937613628 206
103 iso_pu_bacteria 2939626828 2939627942 206
104 iso_pu_bacteria 2961047084 2961050663 206
105 iso_pu_bacteria 2995392953 2995395323 206
106 iso_pu_bacteria 3005416602 3005423137 206
107 iso_pu_bacteria 3007872151 3007875371 206
108 iso_pu_bacteria 8005314921 8005315464 206
109 iso_pu_bacteria 8005484373 8005484629 206
110 iso_pu_bacteria 8055431914 8055433685 206
111 iso_pu_bacteria 8055909800 8055910991 206
112 iso_pu_bacteria 2524023250 2524612019 207
113 iso_pu_bacteria 641228493 641336575 207
114 iso_pu_bacteria 643348555 643390368 207
115 3300013307 Ga0157372_10138796 Ga0157372_101387963 208
116 3300014969 Ga0157376_10135070 Ga0157376_101350702 208
117 3300037471 Ga0395905_0025333 Ga0395905_0025333_3457_4083 208
118 3300041405 Ga0439438_056277 Ga0439438_056277_20_646 208
119 3300003316 rootH1_10140928 rootH1_101409282 209
120 3300003322 rootL2_10000334 rootL2_100003348 209
121 3300000041 ARcpr5oldR_c001237 ARcpr5oldR_0012372 210
122 3300000043 ARcpr5yngRDRAFT_c003200 ARcpr5yngRDRAFT_0032002 210
123 3300000652 ARCol0yngRDRAFT_1003023 ARCol0yngRDRAFT_10030232 210
124 3300002705 JGI25156J39149_1000238 JGI25156J39149_10002386 210
125 3300002737 JGI25162J39368_1000244 JGI25162J39368_100024431 210
126 3300002738 JGI25154J39366_1000104 JGI25154J39366_100010448 210
127 3300002741 JGI25157J39369_1000270 JGI25157J39369_10002706 210
128 3300003214 JGI25165J46597_1000553 JGI25165J46597_100055331 210
129 3300003215 JGI25153J46596_10000890 JGI25153J46596_100008903 210
130 3300003215 JGI25153J46596_10003822 JGI25153J46596_100038223 210
131 3300003773 Ga0055537_1000859 Ga0055537_100085919 210
132 3300003775 Ga0055524_1000103 Ga0055524_100010371 210
133 3300003790 Ga0055528_1048117 Ga0055528_10481171 210
134 3300003794 Ga0055531_10014548 Ga0055531_100145483 210
135 3300005262 Ga0065165_1008702 Ga0065165_10087023 210
136 3300005289 Ga0065704_10071708 Ga0065704_100717083 210
137 3300005327 Ga0070658_10739294 Ga0070658_107392942 210
138 3300005331 Ga0070670_100030182 Ga0070670_1000301825 210
139 3300005335 Ga0070666_10002143 Ga0070666_100021434 210
140 3300005338 Ga0068868_100164767 Ga0068868_1001647672 210
141 3300005339 Ga0070660_100340295 Ga0070660_1003402952 210
142 3300005344 Ga0070661_100008209 Ga0070661_1000082094 210
143 3300005355 Ga0070671_100174795 Ga0070671_1001747952 210
144 3300005455 Ga0070663_100028643 Ga0070663_1000286433 210
145 3300005459 Ga0068867_100141846 Ga0068867_1001418462 210
146 3300005539 Ga0068853_100977621 Ga0068853_1009776211 210
147 3300005548 Ga0070665_100000750 Ga0070665_10000075028 210
148 3300005577 Ga0068857_100596628 Ga0068857_1005966282 210
149 3300005578 Ga0068854_100007220 Ga0068854_1000072207 210
150 3300005616 Ga0068852_100205550 Ga0068852_1002055502 210
151 3300005616 Ga0068852_101366931 Ga0068852_1013669311 210
152 3300005834 Ga0068851_10019661 Ga0068851_100196613 210
153 3300005841 Ga0068863_101136584 Ga0068863_1011365841 210
154 3300005842 Ga0068858_100000339 Ga0068858_10000033922 210
155 3300005843 Ga0068860_100169705 Ga0068860_1001697052 210
156 3300006237 Ga0097621_100336316 Ga0097621_1003363162 210
157 3300006946 Ga0079104_1018642 Ga0079104_10186422 210
158 3300009093 Ga0105240_10020067 Ga0105240_100200673 210
159 3300009093 Ga0105240_10050519 Ga0105240_100505194 210
160 3300009174 Ga0105241_10039756 Ga0105241_100397563 210
161 3300009545 Ga0105237_10020301 Ga0105237_100203015 210
162 3300009545 Ga0105237_10248383 Ga0105237_102483832 210
163 3300009545 Ga0105237_10490592 Ga0105237_104905921 210
164 3300009551 Ga0105238_10017900 Ga0105238_100179004 210
165 3300009553 Ga0105249_10007988 Ga0105249_100079888 210
166 3300013100 Ga0157373_10008825 Ga0157373_100088253 210
167 3300013100 Ga0157373_10215933 Ga0157373_102159332 210
168 3300013102 Ga0157371_10011043 Ga0157371_100110437 210
169 3300013104 Ga0157370_10005708 Ga0157370_100057085 210
170 3300013105 Ga0157369_10047610 Ga0157369_100476101 210
171 3300013249 Ga0171463_1001 Ga0171463_10011133 210
172 3300013296 Ga0157374_10000123 Ga0157374_1000012351 210
173 3300013307 Ga0157372_10079048 Ga0157372_100790482 210
174 3300014497 Ga0182008_10077820 Ga0182008_100778202 210
175 3300014968 Ga0157379_10278565 Ga0157379_102785652 210
176 3300015261 Ga0182006_1028097 Ga0182006_10280972 210
177 3300015261 Ga0182006_1033138 Ga0182006_10331382 210
178 3300015690 Ga0183363_1108 Ga0183363_110817 210
179 3300021361 Ga0213872_10028940 Ga0213872_100289402 210
180 3300025206 Ga0209435_100065 Ga0209435_10006538 210
181 3300025228 Ga0209672_100997 Ga0209672_1009977 210
182 3300025233 Ga0209437_100050 Ga0209437_100050225 210
183 3300025245 Ga0207425_1004373 Ga0207425_10043735 210
184 3300025246 Ga0209646_1000195 Ga0209646_100019546 210
185 3300025246 Ga0209646_1007316 Ga0209646_10073162 210
186 3300025250 Ga0209026_1000235 Ga0209026_100023546 210
187 3300025256 Ga0209759_1000268 Ga0209759_100026838 210
188 3300025256 Ga0209759_1001757 Ga0209759_10017573 210
189 3300025261 Ga0209233_1000037 Ga0209233_1000037267 210
190 3300025261 Ga0209233_1004961 Ga0209233_10049612 210
191 3300025263 Ga0209565_1000011 Ga0209565_1000011359 210
192 3300025272 Ga0209455_1014461 Ga0209455_10144614 210
193 3300025273 Ga0209673_1005383 Ga0209673_10053833 210
194 3300025291 Ga0209675_1002124 Ga0209675_10021242 210
195 3300025295 Ga0209564_1037065 Ga0209564_10370652 210
196 3300025297 Ga0209758_1000008 Ga0209758_1000008272 210
197 3300025297 Ga0209758_1011591 Ga0209758_10115916 210
198 3300025298 Ga0209050_1003093 Ga0209050_10030939 210
199 3300025299 Ga0209256_1000016 Ga0209256_1000016240 210
200 3300025299 Ga0209256_1000027 Ga0209256_100002793 210
201 3300025321 Ga0207656_10012555 Ga0207656_100125552 210
202 3300025904 Ga0207647_10000060 Ga0207647_1000006065 210
203 3300025904 Ga0207647_10000257 Ga0207647_100002577 210
204 3300025913 Ga0207695_10014478 Ga0207695_100144782 210
205 3300025913 Ga0207695_10025533 Ga0207695_100255335 210
206 3300025913 Ga0207695_10056403 Ga0207695_100564032 210
207 3300025914 Ga0207671_10080511 Ga0207671_100805113 210
208 3300025919 Ga0207657_10000187 Ga0207657_1000018713 210
209 3300025924 Ga0207694_10001064 Ga0207694_1000106413 210
210 3300025924 Ga0207694_10187652 Ga0207694_101876522 210
211 3300025925 Ga0207650_10019620 Ga0207650_100196204 210
212 3300025929 Ga0207664_10000047 Ga0207664_1000004743 210
213 3300025961 Ga0207712_10000348 Ga0207712_100003482 210
214 3300025981 Ga0207640_10000702 Ga0207640_1000070214 210
215 3300025981 Ga0207640_10710415 Ga0207640_107104151 210
216 3300026035 Ga0207703_10000349 Ga0207703_1000034924 210
217 3300026041 Ga0207639_10000239 Ga0207639_1000023930 210
218 3300026067 Ga0207678_10005786 Ga0207678_100057866 210
219 3300026078 Ga0207702_10093144 Ga0207702_100931443 210
220 3300026078 Ga0207702_10107758 Ga0207702_101077583 210
221 3300026078 Ga0207702_10589668 Ga0207702_105896681 210
222 3300026089 Ga0207648_10173407 Ga0207648_101734072 210
223 3300026095 Ga0207676_10778891 Ga0207676_107788911 210
224 3300026116 Ga0207674_10198134 Ga0207674_101981342 210
225 3300026142 Ga0207698_10015887 Ga0207698_100158874 210
226 3300027111 Ga0209281_1010105 Ga0209281_10101054 210
227 3300028379 Ga0268266_10000007 Ga0268266_100000071149 210
228 3300028381 Ga0268264_10140940 Ga0268264_101409402 210
229 3300031235 Ga0265330_10061945 Ga0265330_100619454 210
230 3300031711 Ga0265314_10066496 Ga0265314_100664963 210
231 3300032004 Ga0307414_10022196 Ga0307414_100221962 210
232 3300035725 Ga0373947_0088151 Ga0373947_0088151_713_1357 210
233 3300037068 Ga0373925_0006737 Ga0373925_0006737_3234_3878 210
234 3300037418 Ga0395900_0000262 Ga0395900_0000262_79545_80177 210
235 3300037418 Ga0395900_0857886 Ga0395900_0857886_113_745 210
236 3300037466 Ga0395898_0015838 Ga0395898_0015838_1482_2114 210
237 3300037853 Ga0436364_0405070 Ga0436364_0405070_310_945 210
238 3300038443 Ga0395901_0267448 Ga0395901_0267448_634_1266 210
239 3300038443 Ga0395901_0369283 Ga0395901_0369283_281_913 210
240 3300039447 Ga0436361_0558563 Ga0436361_0558563_3026_3664 210
241 3300039450 Ga0436363_1363642 Ga0436363_1363642_571_1206 210
242 3300041404 Ga0439436_0000552 Ga0439436_0000552_559_1191 210
243 3300041406 Ga0439439_0001510 Ga0439439_0001510_142_774 210
244 3300041408 Ga0439453_0005027 Ga0439453_0005027_1238_1870 210
245 3300042005 Ga0439448_0002598 Ga0439448_0002598_2128_2760 210
246 3300042007 Ga0439449_0070376 Ga0439449_0070376_441_1073 210
247 3300042439 Ga0439464_0005066 Ga0439464_0005066_915_1550 210
248 3300044683 Ga0466965_0013387 Ga0466965_0013387_311_949 210
249 3300044684 Ga0466966_0017666 Ga0466966_0017666_1832_2470 210
250 3300044694 Ga0466963_0066743 Ga0466963_0066743_793_1425 210
251 3300044719 Ga0466971_0062418 Ga0466971_0062418_610_1248 210
252 3300044765 Ga0466970_0007948 Ga0466970_0007948_3150_3782 210
253 3300044842 Ga0466957_0053469 Ga0466957_0053469_119_751 210
254 3300045049 Ga0466959_0032063 Ga0466959_0032063_1168_1806 210
255 3300045976 Ga0466967_0342465 Ga0466967_0342465_338_970 210
256 3300046660 Ga0495625_0000876 Ga0495625_0000876_5452_6156 210
257 3300046680 Ga0495646_0109091 Ga0495646_0109091_619_1257 210
258 3300047472 Ga0495686_0034700 Ga0495686_0034700_2331_2972 210
259 3300048926 Ga0496123_0100730 Ga0496123_0100730_200_832 210
260 3300048927 Ga0496124_0023609 Ga0496124_0023609_3961_4593 210
261 3300049571 Ga0501034_0437959 Ga0501034_0437959_226_864 210
262 3300049686 Ga0501257_071173 Ga0501257_071173_130_762 210
263 3300049823 Ga0501044_0068793 Ga0501044_0068793_1089_1721 210
264 3300053087 Ga0500643_020113 Ga0500643_020113_1045_1677 210
265 3300053096 Ga0500641_0014446 Ga0500641_0014446_180_812 210
266 3300053117 Ga0500593_055503 Ga0500593_055503_814_1446 210
267 3300053139 Ga0500568_0004460 Ga0500568_0004460_1146_1778 210
268 3300053153 Ga0500616_0148388 Ga0500616_0148388_91_723 210
269 3300053157 Ga0500624_000048 Ga0500624_000048_56682_57314 210
270 3300053158 Ga0500627_0026731 Ga0500627_0026731_199_831 210
271 3300053177 Ga0500636_0020496 Ga0500636_0020496_3009_3641 210
272 3300053730 Ga0500645_000184 Ga0500645_000184_47482_48114 210
273 3300053730 Ga0500645_055452 Ga0500645_055452_192_824 210

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01810

LysE

LysE type translocator

39

232

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xzi-assembly1.cif.gz_A cryo-em structure of toc-tic supercomplex from chlamydomonas reinhardtii 0.4255 5 209
7xzi-assembly1.cif.gz_A cryo-em structure of toc-tic supercomplex from chlamydomonas reinhardtii 0.4189 5 209
7bp3-assembly1.cif.gz_B cryo-em structure of the human mct2 0.358 3 206
8jzr-assembly1.cif.gz_B outward_facing slc15a4 monomer 0.3483 3 204
5kte-assembly1.cif.gz_A crystal structure of deinococcus radiodurans mnth, an nramp-family transition metal transporter 0.347 10 205
ID Description Score Start End Superfamily
af_Q2FZP3_16_220_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5525 9 205 1.20.1250.20
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5524 37 204 1.20.1250.20
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5386 37 204 1.20.1250.20
af_Q2FZP3_16_220_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5344 9 205 1.20.1250.20
af_C6TIG3_1_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5318 5 205 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A808W4R8-F1-model_v4 deleted 0.8329 1 210
AF-B2U866-F1-model_v4 Lysine exporter protein (LYSE/YGGA) 0.8289 1 210 GO:0005886
GO:0015171
AF-B2U866-F1-model_v4 Lysine exporter protein (LYSE/YGGA) 0.8254 1 210 GO:0005886
GO:0015171
AF-A0A401K3I3-F1-model_v4 Lysine transporter LysE 0.8192 1 210 GO:0005886
GO:0015171
AF-A0A401K3I3-F1-model_v4 Lysine transporter LysE 0.8156 1 210 GO:0005886
GO:0015171

Feature Viewer

pLDDT pTM Quality
88.21 0.8 High
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Predicted Structure (AlphaFold2)

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