F379701

General Info

Members Datasets Scaffolds Average Seq Length
274 157 546 555

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10006754|Ga0105237_100067545
Length 579
Sequence LAFNSSSQKFSVMKKIQFNFNKWRGVYFLAVIAILFSASCKKQLDVKDPNDPTFAGNVNSEAGLAAYAKGGIYWNGFKYSDDWLGDSYFSLPWGYHELMGDVVGGGQGSNNQTTTMGVPDKFQADPNDASTVFTNTSPQALGIIRGFNTAAASANANNALYYEWVNMYAMINACNLTLENLGGITLSADKANTVKAWCYWWKGYAYAQIGTMYYAGLIIDKSNTIINKFVSQSAIITESNKQLNLAMTTLNGISNQADYYTMIAELIPTQNQVGLGKALSAAQWVRTINTMLARNILLNHLAPFVNGNTTATIAKASIPVMAAADWQSVITFCNAGIKQGDYVFTGRTSSSNSFFSANGGSVAGITASSNQTTTYKLSERLVQQFKAGDKRLANFSTANGTFYGDANTNSTRYSLVDGATAGLTGIPILGSRQAGKLEIYIGPTYEETQLMLAEANIRTGNVAAALTIIDNVRAYQGSGVAPIAGTGLTASQAMQELTMERMAALAFRGLSFYDSRRWGWTYAIANGGGRYGCTLLFKGNVYTNATINYNFMDYWDVPADETDKNTPSADSAPVKNVNY

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
73 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
117 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
118 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
119 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
123 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
124 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
125 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
126 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
127 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
128 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
131 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
140 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
143 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
144 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
148 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
149 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
150 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
151 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
152 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
153 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
154 2738541278 Niastella sp. CF465 Isolate Unclassified
155 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
156 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
157 2904467357 Chitinophaga sancti 3198 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.54
Metatranscriptomes 0
Isolates 1.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.57
Nodule 0
Rhizoplane 0.36
Rhizosphere 85.4
Stem 0
Stem Tuber 0
Unclassified 4.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10006754 3300009545 Bacteria 12666
2 JGI24737J22298_10006903 3300001990 Bacteria 3853
3 JGI25153J46596_10008395 3300003215 Bacteria 4941
4 rootH2_10075934 3300003320 Bacteria 19112
5 rootL2_10002824 3300003322 Bacteria 5032
6 rootL2_10084353 3300003322 Bacteria 8237
7 rootL2_10238780 3300003322 Bacteria 2161
8 rootH1_10144840 3300003323 Bacteria 6893
9 rootH1_10183203 3300003323 Bacteria 2231
10 Ga0055531_10000023 3300003794 Bacteria 165025
11 Ga0065714_10089950 3300005288 Bacteria 1949
12 Ga0065712_10070144 3300005290 Bacteria 6291
13 Ga0070676_10017165 3300005328 Bacteria 4004
14 Ga0070683_100003994 3300005329 Bacteria 12078
15 Ga0070690_100025087 3300005330 Bacteria 3670
16 Ga0070670_100010720 3300005331 Bacteria 7831
17 Ga0068869_100008586 3300005334 Bacteria 6596
18 Ga0068869_100009920 3300005334 Bacteria 6189
19 Ga0070666_10000039 3300005335 Bacteria 115360
20 Ga0070666_10000077 3300005335 Bacteria 70693
21 Ga0068868_100003971 3300005338 Bacteria 10324
22 Ga0068868_100058434 3300005338 Bacteria 3048
23 Ga0068868_100093744 3300005338 Unclassified 2421
24 Ga0070660_100073573 3300005339 Bacteria 2672
25 Ga0070689_100029110 3300005340 Bacteria 4178
26 Ga0070661_100002742 3300005344 Bacteria 12078
27 Ga0070668_100004258 3300005347 Bacteria 10619
28 Ga0070668_100024255 3300005347 Bacteria 4594
29 Ga0070668_100085733 3300005347 Bacteria 2476
30 Ga0070669_100007656 3300005353 Bacteria 7720
31 Ga0070674_100002487 3300005356 Bacteria 10207
32 Ga0070674_100061950 3300005356 Bacteria 2613
33 Ga0070673_100015191 3300005364 Bacteria 5399
34 Ga0070688_100020724 3300005365 Unclassified 3828
35 Ga0070659_100016913 3300005366 Bacteria 5482
36 Ga0070667_100017749 3300005367 Bacteria 5898
37 Ga0070667_100043843 3300005367 Unclassified 3755
38 Ga0070662_100001588 3300005457 Bacteria 14040
39 Ga0070685_10001348 3300005466 Bacteria 12881
40 Ga0070684_100004828 3300005535 Bacteria 10298
41 Ga0070684_100176955 3300005535 Bacteria 1939
42 Ga0070665_100016622 3300005548 Bacteria 7373
43 Ga0070665_100139481 3300005548 Bacteria 2428
44 Ga0068855_100000093 3300005563 Bacteria 106968
45 Ga0068855_100109604 3300005563 Bacteria 3170
46 Ga0068855_100130383 3300005563 Unclassified 2872
47 Ga0070664_100005377 3300005564 Bacteria 10282
48 Ga0068857_100007433 3300005577 Bacteria 9431
49 Ga0068857_100043142 3300005577 Unclassified 4001
50 Ga0068856_100040955 3300005614 Bacteria 4551
51 Ga0068856_100044146 3300005614 Bacteria 4385
52 Ga0068852_100005180 3300005616 Bacteria 9297
53 Ga0068859_100000006 3300005617 Bacteria 421509
54 Ga0068859_100000063 3300005617 Bacteria 106123
55 Ga0068859_100010986 3300005617 Bacteria 9111
56 Ga0068859_100017073 3300005617 Bacteria 7287
57 Ga0068859_100133621 3300005617 Bacteria 2553
58 Ga0068859_100205720 3300005617 Bacteria 2053
59 Ga0068864_100000469 3300005618 Bacteria 34957
60 Ga0068864_100050940 3300005618 Bacteria 3565
61 Ga0068861_100003964 3300005719 Bacteria 9911
62 Ga0068851_10025872 3300005834 Bacteria 2880
63 Ga0068870_10001731 3300005840 Bacteria 8935
64 Ga0068863_100000760 3300005841 Bacteria 32338
65 Ga0068863_100011211 3300005841 Bacteria 8686
66 Ga0068858_100003315 3300005842 Bacteria 16034
67 Ga0068858_100103605 3300005842 Bacteria 2654
68 Ga0068860_100000003 3300005843 Bacteria 575741
69 Ga0068860_100000991 3300005843 Bacteria 31410
70 Ga0068860_100006727 3300005843 Bacteria 11532
71 Ga0081539_10000925 3300005985 Bacteria 55202
72 Ga0075366_10000989 3300006195 Bacteria 13901
73 Ga0097621_100005254 3300006237 Bacteria 9113
74 Ga0097621_100028533 3300006237 Bacteria 4398
75 Ga0097621_100060840 3300006237 Bacteria 3096
76 Ga0068871_100015910 3300006358 Bacteria 5649
77 Ga0068871_100038235 3300006358 Bacteria 3831
78 Ga0068871_100058177 3300006358 Bacteria 3147
79 Ga0075434_100019964 3300006871 Bacteria 6490
80 Ga0097620_100000006 3300006931 Bacteria 421509
81 Ga0097620_100000063 3300006931 Bacteria 106123
82 Ga0097620_100010985 3300006931 Bacteria 9111
83 Ga0097620_100017073 3300006931 Bacteria 7287
84 Ga0097620_100133629 3300006931 Bacteria 2553
85 Ga0097620_100205727 3300006931 Bacteria 2053
86 Ga0105240_10007027 3300009093 Bacteria 16425
87 Ga0105240_10009684 3300009093 Bacteria 13615
88 Ga0105240_10010400 3300009093 Bacteria 13076
89 Ga0105240_10186339 3300009093 Bacteria 2444
90 Ga0105245_10085749 3300009098 Bacteria 2887
91 Ga0105241_10000324 3300009174 Bacteria 36128
92 Ga0105241_10008059 3300009174 Bacteria 7749
93 Ga0105241_10018776 3300009174 Bacteria 5094
94 Ga0105241_10126255 3300009174 Bacteria 2066
95 Ga0105242_10007808 3300009176 Bacteria 8233
96 Ga0105242_10010369 3300009176 Bacteria 7146
97 Ga0105242_10063008 3300009176 Bacteria 3053
98 Ga0105237_10000330 3300009545 Bacteria 66900
99 Ga0105237_10002882 3300009545 Bacteria 20898
100 Ga0105237_10007668 3300009545 Bacteria 11791
101 Ga0105249_10001083 3300009553 Bacteria 24183
102 Ga0105249_10002899 3300009553 Bacteria 14794
103 Ga0105249_10020053 3300009553 Bacteria 5971
104 Ga0105239_10000047 3300010375 Bacteria 179834
105 Ga0105239_10000252 3300010375 Bacteria 80006
106 Ga0105239_10249463 3300010375 Unclassified 1994
107 Ga0105246_10002410 3300011119 Bacteria 11280
108 Ga0105246_10003232 3300011119 Bacteria 9889
109 Ga0105246_10003805 3300011119 Bacteria 9145
110 Ga0157373_10007865 3300013100 Bacteria 7931
111 Ga0157373_10038310 3300013100 Bacteria 3436
112 Ga0157370_10097226 3300013104 Unclassified 2762
113 Ga0157369_10039977 3300013105 Bacteria 5123
114 Ga0157374_10000013 3300013296 Bacteria 461240
115 Ga0157374_10007904 3300013296 Bacteria 9080
116 Ga0157374_10157573 3300013296 Bacteria 2210
117 Ga0157378_10000557 3300013297 Bacteria 35516
118 Ga0157378_10015249 3300013297 Bacteria 6730
119 Ga0157378_10105358 3300013297 Bacteria 2578
120 Ga0157378_10112225 3300013297 Bacteria 2500
121 Ga0157378_10168899 3300013297 Bacteria 2050
122 Ga0163162_10000112 3300013306 Bacteria 72032
123 Ga0163162_10000260 3300013306 Bacteria 48090
124 Ga0163162_10004476 3300013306 Bacteria 13464
125 Ga0163162_10011620 3300013306 Bacteria 8585
126 Ga0163162_10019395 3300013306 Bacteria 6669
127 Ga0163162_10074498 3300013306 Bacteria 3453
128 Ga0163162_10101929 3300013306 Bacteria 2963
129 Ga0157372_10024508 3300013307 Bacteria 6556
130 Ga0157372_10033417 3300013307 Bacteria 5650
131 Ga0157375_10004148 3300013308 Bacteria 12575
132 Ga0157375_10173320 3300013308 Bacteria 2306
133 Ga0163163_10027704 3300014325 Bacteria 5432
134 Ga0163163_10029059 3300014325 Bacteria 5315
135 Ga0157380_10075008 3300014326 Bacteria 2748
136 Ga0157377_10003176 3300014745 Bacteria 7407
137 Ga0157379_10031685 3300014968 Bacteria 4711
138 Ga0157376_10000683 3300014969 Bacteria 21980
139 Ga0157376_10001002 3300014969 Bacteria 18413
140 Ga0157376_10011453 3300014969 Bacteria 6539
141 Ga0182005_1000050 3300015265 Bacteria 121573
142 Ga0163161_10002779 3300017792 Bacteria 12408
143 Ga0163161_10007348 3300017792 Bacteria 7606
144 Ga0209436_101474 3300025208 Bacteria 8167
145 Ga0209455_1004014 3300025272 Bacteria 4981
146 Ga0209673_1013282 3300025273 Bacteria 3259
147 Ga0209564_1008247 3300025295 Bacteria 5188
148 Ga0209758_1001301 3300025297 Bacteria 30586
149 Ga0209257_1000013 3300025304 Bacteria 1047305
150 Ga0207680_10000037 3300025903 Bacteria 72773
151 Ga0207680_10000064 3300025903 Bacteria 48156
152 Ga0207680_10004556 3300025903 Bacteria 6581
153 Ga0207647_10005168 3300025904 Bacteria 9599
154 Ga0207647_10033494 3300025904 Bacteria 3290
155 Ga0207645_10000356 3300025907 Bacteria 37874
156 Ga0207645_10006713 3300025907 Bacteria 8226
157 Ga0207654_10000372 3300025911 Bacteria 26113
158 Ga0207654_10002200 3300025911 Bacteria 9989
159 Ga0207695_10000066 3300025913 Bacteria 334103
160 Ga0207695_10008885 3300025913 Bacteria 12508
161 Ga0207695_10014428 3300025913 Bacteria 9360
162 Ga0207695_10016914 3300025913 Bacteria 8511
163 Ga0207695_10132886 3300025913 Bacteria 2444
164 Ga0207671_10000453 3300025914 Bacteria 56447
165 Ga0207671_10000810 3300025914 Bacteria 39510
166 Ga0207671_10002080 3300025914 Bacteria 21905
167 Ga0207671_10002179 3300025914 Bacteria 21271
168 Ga0207671_10009502 3300025914 Bacteria 8123
169 Ga0207657_10083712 3300025919 Bacteria 2676
170 Ga0207649_10004202 3300025920 Bacteria 7843
171 Ga0207649_10080812 3300025920 Bacteria 2103
172 Ga0207681_10026158 3300025923 Unclassified 3761
173 Ga0207650_10018212 3300025925 Bacteria 4926
174 Ga0207650_10159289 3300025925 Bacteria 1787
175 Ga0207687_10100769 3300025927 Bacteria 2125
176 Ga0207644_10033872 3300025931 Bacteria 3573
177 Ga0207706_10000167 3300025933 Bacteria 72622
178 Ga0207706_10013076 3300025933 Bacteria 7553
179 Ga0207686_10051257 3300025934 Bacteria 2571
180 Ga0207670_10020483 3300025936 Bacteria 4065
181 Ga0207670_10027346 3300025936 Bacteria 3605
182 Ga0207689_10001712 3300025942 Bacteria 20762
183 Ga0207689_10002686 3300025942 Bacteria 16446
184 Ga0207689_10003834 3300025942 Bacteria 13699
185 Ga0207689_10014829 3300025942 Bacteria 6616
186 Ga0207689_10017562 3300025942 Bacteria 6048
187 Ga0207689_10017745 3300025942 Bacteria 6014
188 Ga0207661_10031252 3300025944 Bacteria 4110
189 Ga0207679_10001806 3300025945 Bacteria 13318
190 Ga0207667_10000588 3300025949 Bacteria 47296
191 Ga0207667_10016534 3300025949 Bacteria 8333
192 Ga0207651_10020527 3300025960 Bacteria 3990
193 Ga0207712_10000590 3300025961 Bacteria 29093
194 Ga0207712_10001346 3300025961 Bacteria 16817
195 Ga0207712_10006788 3300025961 Bacteria 7219
196 Ga0207668_10068708 3300025972 Bacteria 2520
197 Ga0207658_10022024 3300025986 Bacteria 4432
198 Ga0207658_10061311 3300025986 Bacteria 2810
199 Ga0207677_10027093 3300026023 Unclassified 3604
200 Ga0207677_10038877 3300026023 Bacteria 3123
201 Ga0207703_10006161 3300026035 Bacteria 9599
202 Ga0207639_10016528 3300026041 Bacteria 5223
203 Ga0207702_10039272 3300026078 Bacteria 3965
204 Ga0207641_10000097 3300026088 Bacteria 123547
205 Ga0207641_10000186 3300026088 Bacteria 86601
206 Ga0207648_10023884 3300026089 Bacteria 5466
207 Ga0207676_10002799 3300026095 Bacteria 12399
208 Ga0207676_10010503 3300026095 Bacteria 6596
209 Ga0207674_10017236 3300026116 Bacteria 7879
210 Ga0207674_10118851 3300026116 Unclassified 2613
211 Ga0207675_100003624 3300026118 Bacteria 15060
212 Ga0207675_100013007 3300026118 Bacteria 7768
213 Ga0207683_10003871 3300026121 Bacteria 12982
214 Ga0207698_10034014 3300026142 Bacteria 3711
215 Ga0268265_10070545 3300028380 Unclassified 2718
216 Ga0268264_10000063 3300028381 Bacteria 301702
217 Ga0268264_10002988 3300028381 Bacteria 14675
218 Ga0268264_10006368 3300028381 Bacteria 9951
219 Ga0268264_10010756 3300028381 Bacteria 7559
220 Ga0307517_10002077 3300028786 Bacteria 32607
221 Ga0307515_10000059 3300028794 Bacteria 257520
222 Ga0307515_10000224 3300028794 Bacteria 140276
223 Ga0307515_10000667 3300028794 Bacteria 79135
224 Ga0307515_10000681 3300028794 Bacteria 78150
225 Ga0307515_10189359 3300028794 Bacteria 1974
226 Ga0307509_10019909 3300031507 Bacteria 7632
227 Ga0307516_10071411 3300031730 Bacteria 3333
228 Ga0307507_10000111 3300033179 Bacteria 134722
229 Ga0307510_10000637 3300033180 Bacteria 35581
230 Ga0307510_10005761 3300033180 Bacteria 14768
231 Ga0373937_0000946 3300036401 Bacteria 24696
232 Ga0466972_0000021 3300044658 Bacteria 196266
233 Ga0466972_0000061 3300044658 Bacteria 109075
234 Ga0466970_0000642 3300044765 Bacteria 17208
235 Ga0495592_0027549 3300046454 Bacteria 4308
236 Ga0495651_0073118 3300046462 Bacteria 2603
237 Ga0495653_0015186 3300046463 Bacteria 6278
238 Ga0495585_0000237 3300046492 Bacteria 57136
239 Ga0495596_0006300 3300046500 Bacteria 5484
240 Ga0495616_0007790 3300046513 Bacteria 6392
241 Ga0495630_0001112 3300046517 Bacteria 18503
242 Ga0495631_0001092 3300046518 Bacteria 16855
243 Ga0495648_0005897 3300046524 Bacteria 10074
244 Ga0495648_0014572 3300046524 Bacteria 5747
245 Ga0495586_0008411 3300046535 Bacteria 5491
246 Ga0495587_0023984 3300046536 Bacteria 3744
247 Ga0495633_0000019 3300046558 Bacteria 233769
248 Ga0495633_0000082 3300046558 Bacteria 125101
249 Ga0495668_0000017 3300046616 Bacteria 434025
250 Ga0495625_0000761 3300046660 Bacteria 44882
251 Ga0495625_0014834 3300046660 Bacteria 6200
252 Ga0495635_0027870 3300046663 Bacteria 3928
253 Ga0495613_0089805 3300046689 Bacteria 2226
254 Ga0495687_000040 3300047443 Bacteria 230786
255 Ga0495675_0054188 3300047444 Bacteria 2546
256 Ga0496110_0068304 3300048913 Bacteria 3146
257 Ga0501257_007349 3300049686 Bacteria 2461
258 nmdc:mga0k408_120_c1 3300050493 Bacteria 38359
259 nmdc:mga0k408_9443_c1 3300050493 Bacteria 5256
260 nmdc:mga09592_26220_c1 3300050508 Bacteria 4828
261 nmdc:mga0n895_15192_c1 3300050512 Bacteria 7015
262 Ga0495619_0042988 3300053085 Bacteria 2961
263 Ga0500644_0000146 3300053088 Bacteria 44082
264 Ga0500651_0059071 3300053093 Bacteria 2398
265 Ga0500608_001279 3300053122 Bacteria 8964
266 Ga0500614_010611 3300053123 Bacteria 1981
267 Ga0500618_000251 3300053125 Bacteria 42567
268 Ga0500622_0000463 3300053156 Bacteria 38517
269 Ga0500624_000800 3300053157 Bacteria 7339
270 2738730360 2738541278 Bacteria 9755573
271 2819571829 2818991442 Bacteria 8318214
272 2821141929 2821136567 Bacteria 8080116
273 2904469657 2904467357 Bacteria 8057758
274 Ga0105237_10006754
275 JGI24737J22298_10006903
276 JGI25153J46596_10008395
277 rootH2_10075934
278 rootL2_10002824
279 rootL2_10084353
280 rootL2_10238780
281 rootH1_10144840
282 rootH1_10183203
283 Ga0055531_10000023
284 Ga0065714_10089950
285 Ga0065712_10070144
286 Ga0070676_10017165
287 Ga0070683_100003994
288 Ga0070690_100025087
289 Ga0070670_100010720
290 Ga0068869_100008586
291 Ga0068869_100009920
292 Ga0070666_10000039
293 Ga0070666_10000077
294 Ga0068868_100003971
295 Ga0068868_100058434
296 Ga0068868_100093744
297 Ga0070660_100073573
298 Ga0070689_100029110
299 Ga0070661_100002742
300 Ga0070668_100004258
301 Ga0070668_100024255
302 Ga0070668_100085733
303 Ga0070669_100007656
304 Ga0070674_100002487
305 Ga0070674_100061950
306 Ga0070673_100015191
307 Ga0070688_100020724
308 Ga0070659_100016913
309 Ga0070667_100017749
310 Ga0070667_100043843
311 Ga0070662_100001588
312 Ga0070685_10001348
313 Ga0070684_100004828
314 Ga0070684_100176955
315 Ga0070665_100016622
316 Ga0070665_100139481
317 Ga0068855_100000093
318 Ga0068855_100109604
319 Ga0068855_100130383
320 Ga0070664_100005377
321 Ga0068857_100007433
322 Ga0068857_100043142
323 Ga0068856_100040955
324 Ga0068856_100044146
325 Ga0068852_100005180
326 Ga0068859_100000006
327 Ga0068859_100000063
328 Ga0068859_100010986
329 Ga0068859_100017073
330 Ga0068859_100133621
331 Ga0068859_100205720
332 Ga0068864_100000469
333 Ga0068864_100050940
334 Ga0068861_100003964
335 Ga0068851_10025872
336 Ga0068870_10001731
337 Ga0068863_100000760
338 Ga0068863_100011211
339 Ga0068858_100003315
340 Ga0068858_100103605
341 Ga0068860_100000003
342 Ga0068860_100000991
343 Ga0068860_100006727
344 Ga0081539_10000925
345 Ga0075366_10000989
346 Ga0097621_100005254
347 Ga0097621_100028533
348 Ga0097621_100060840
349 Ga0068871_100015910
350 Ga0068871_100038235
351 Ga0068871_100058177
352 Ga0075434_100019964
353 Ga0097620_100000006
354 Ga0097620_100000063
355 Ga0097620_100010985
356 Ga0097620_100017073
357 Ga0097620_100133629
358 Ga0097620_100205727
359 Ga0105240_10007027
360 Ga0105240_10009684
361 Ga0105240_10010400
362 Ga0105240_10186339
363 Ga0105245_10085749
364 Ga0105241_10000324
365 Ga0105241_10008059
366 Ga0105241_10018776
367 Ga0105241_10126255
368 Ga0105242_10007808
369 Ga0105242_10010369
370 Ga0105242_10063008
371 Ga0105237_10000330
372 Ga0105237_10002882
373 Ga0105237_10007668
374 Ga0105249_10001083
375 Ga0105249_10002899
376 Ga0105249_10020053
377 Ga0105239_10000047
378 Ga0105239_10000252
379 Ga0105239_10249463
380 Ga0105246_10002410
381 Ga0105246_10003232
382 Ga0105246_10003805
383 Ga0157373_10007865
384 Ga0157373_10038310
385 Ga0157370_10097226
386 Ga0157369_10039977
387 Ga0157374_10000013
388 Ga0157374_10007904
389 Ga0157374_10157573
390 Ga0157378_10000557
391 Ga0157378_10015249
392 Ga0157378_10105358
393 Ga0157378_10112225
394 Ga0157378_10168899
395 Ga0163162_10000112
396 Ga0163162_10000260
397 Ga0163162_10004476
398 Ga0163162_10011620
399 Ga0163162_10019395
400 Ga0163162_10074498
401 Ga0163162_10101929
402 Ga0157372_10024508
403 Ga0157372_10033417
404 Ga0157375_10004148
405 Ga0157375_10173320
406 Ga0163163_10027704
407 Ga0163163_10029059
408 Ga0157380_10075008
409 Ga0157377_10003176
410 Ga0157379_10031685
411 Ga0157376_10000683
412 Ga0157376_10001002
413 Ga0157376_10011453
414 Ga0182005_1000050
415 Ga0163161_10002779
416 Ga0163161_10007348
417 Ga0209436_101474
418 Ga0209455_1004014
419 Ga0209673_1013282
420 Ga0209564_1008247
421 Ga0209758_1001301
422 Ga0209257_1000013
423 Ga0207680_10000037
424 Ga0207680_10000064
425 Ga0207680_10004556
426 Ga0207647_10005168
427 Ga0207647_10033494
428 Ga0207645_10000356
429 Ga0207645_10006713
430 Ga0207654_10000372
431 Ga0207654_10002200
432 Ga0207695_10000066
433 Ga0207695_10008885
434 Ga0207695_10014428
435 Ga0207695_10016914
436 Ga0207695_10132886
437 Ga0207671_10000453
438 Ga0207671_10000810
439 Ga0207671_10002080
440 Ga0207671_10002179
441 Ga0207671_10009502
442 Ga0207657_10083712
443 Ga0207649_10004202
444 Ga0207649_10080812
445 Ga0207681_10026158
446 Ga0207650_10018212
447 Ga0207650_10159289
448 Ga0207687_10100769
449 Ga0207644_10033872
450 Ga0207706_10000167
451 Ga0207706_10013076
452 Ga0207686_10051257
453 Ga0207670_10020483
454 Ga0207670_10027346
455 Ga0207689_10001712
456 Ga0207689_10002686
457 Ga0207689_10003834
458 Ga0207689_10014829
459 Ga0207689_10017562
460 Ga0207689_10017745
461 Ga0207661_10031252
462 Ga0207679_10001806
463 Ga0207667_10000588
464 Ga0207667_10016534
465 Ga0207651_10020527
466 Ga0207712_10000590
467 Ga0207712_10001346
468 Ga0207712_10006788
469 Ga0207668_10068708
470 Ga0207658_10022024
471 Ga0207658_10061311
472 Ga0207677_10027093
473 Ga0207677_10038877
474 Ga0207703_10006161
475 Ga0207639_10016528
476 Ga0207702_10039272
477 Ga0207641_10000097
478 Ga0207641_10000186
479 Ga0207648_10023884
480 Ga0207676_10002799
481 Ga0207676_10010503
482 Ga0207674_10017236
483 Ga0207674_10118851
484 Ga0207675_100003624
485 Ga0207675_100013007
486 Ga0207683_10003871
487 Ga0207698_10034014
488 Ga0268265_10070545
489 Ga0268264_10000063
490 Ga0268264_10002988
491 Ga0268264_10006368
492 Ga0268264_10010756
493 Ga0307517_10002077
494 Ga0307515_10000059
495 Ga0307515_10000224
496 Ga0307515_10000667
497 Ga0307515_10000681
498 Ga0307515_10189359
499 Ga0307509_10019909
500 Ga0307516_10071411
501 Ga0307507_10000111
502 Ga0307510_10000637
503 Ga0307510_10005761
504 Ga0373937_0000946
505 Ga0466972_0000021
506 Ga0466972_0000061
507 Ga0466970_0000642
508 Ga0495592_0027549
509 Ga0495651_0073118
510 Ga0495653_0015186
511 Ga0495585_0000237
512 Ga0495596_0006300
513 Ga0495616_0007790
514 Ga0495630_0001112
515 Ga0495631_0001092
516 Ga0495648_0005897
517 Ga0495648_0014572
518 Ga0495586_0008411
519 Ga0495587_0023984
520 Ga0495633_0000019
521 Ga0495633_0000082
522 Ga0495668_0000017
523 Ga0495625_0000761
524 Ga0495625_0014834
525 Ga0495635_0027870
526 Ga0495613_0089805
527 Ga0495687_000040
528 Ga0495675_0054188
529 Ga0496110_0068304
530 Ga0501257_007349
531 nmdc:mga0k408_120_c1
532 nmdc:mga0k408_9443_c1
533 nmdc:mga09592_26220_c1
534 nmdc:mga0n895_15192_c1
535 Ga0495619_0042988
536 Ga0500644_0000146
537 Ga0500651_0059071
538 Ga0500608_001279
539 Ga0500614_010611
540 Ga0500618_000251
541 Ga0500622_0000463
542 Ga0500624_000800
543 2738730360
544 2819571829
545 2821141929
546 2904469657

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07980

SusD_RagB

SusD family

445

579

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nq0-assembly1.cif.gz_A structural insights into yeast histone chaperone hif1: a scaffold protein recruiting protein complexes to core histones 0.7219 130 285
3snx-assembly2.cif.gz_B crystal structure of a putative susd-like carbohydrate binding protein (bt_1439) from bacteroides thetaiotaomicron vpi-5482 at 1.88 a resolution 0.6596 24 522
3snx-assembly2.cif.gz_B crystal structure of a putative susd-like carbohydrate binding protein (bt_1439) from bacteroides thetaiotaomicron vpi-5482 at 1.88 a resolution 0.6583 24 522
3jq1-assembly1.cif.gz_A crystal structure of susd superfamily protein (yp_001297730.1) from bacteroides vulgatus atcc 8482 at 1.55 a resolution 0.6563 31 472
3jq1-assembly2.cif.gz_B crystal structure of susd superfamily protein (yp_001297730.1) from bacteroides vulgatus atcc 8482 at 1.55 a resolution 0.6374 31 472
ID Description Score Start End Superfamily
3ck9B01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.8061 57 215 1.25.40.390
af_Q9FJW6_410_491_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.6976 400 441 1.25.40.10
af_K7L342_19_130_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.6913 399 440 1.25.40.10
af_Q4E5A1_41_304_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.6786 118 284 1.25.40.10
3jq1B01 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.6725 123 472 1.25.40.390
ID Description Score Start End GO Terms
AF-A0A1Q5ZW26-F1-model_v4 RagB/SusD domain-containing protein 0.9607 9 532 GO:0009279
AF-A0A562TNC3-F1-model_v4 SusD-like starch-binding protein associating with outer membrane 0.9512 2 532 GO:0009279
AF-A0A537K317-F1-model_v4 RagB/SusD family nutrient uptake outer membrane protein 0.9512 64 531 GO:0009279
AF-A0A562TNC3-F1-model_v4 SusD-like starch-binding protein associating with outer membrane 0.9477 2 532 GO:0009279
AF-A0A4Q3QQG6-F1-model_v4 deleted 0.9476 271 532

Map