F379786

General Info

Members Datasets Scaffolds Average Seq Length
274 155 548 224

Family's Representative Sequence

Representative Sequence 3300025929|Ga0207664_10229935|Ga0207664_102299352
Length 251
Sequence MYRLPMDERPMRAPVGTYAVGAQSATMRVLIVEDEPKMAALVARALREDGHAADVAATGEDAVWMTHAVPYDAVVLDVMLPGLDGFEVLRRLRADRIWTPVLMLTARDAVGDRVGGLDAGADDYLTKPFSFPELLARLRAIVRRGPVERPVVLELGDLVLDPAAHRAWRGDTELALSAREFALLELMMRHPGETLTRLQLIEGVWDIAFESRSNIVDVYMRYLREKIDRPFGRRSIETVRGVGYRLRDDRE

Samples

Sample ID Description Type Environment
1 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
93 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
94 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
95 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
101 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
102 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
103 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
104 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
123 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
152 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
153 2855730933 Achromobacter sp. HZ28 Isolate Nodule
154 2855767633 Achromobacter sp. HZ34 Isolate Nodule
155 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.18
Metatranscriptomes 0.36
Isolates 1.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.46
Nodule 0.73
Rhizoplane 4.01
Rhizosphere 92.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207664_10229935 3300025929 Bacteria 1612
2 JGI25151J46595_10000353 3300003187 Bacteria 49020
3 Ga0070658_10014020 3300005327 Bacteria 6434
4 Ga0070683_100070453 3300005329 Bacteria 3261
5 Ga0070683_100097832 3300005329 Bacteria 2761
6 Ga0070683_100205475 3300005329 Bacteria 1871
7 Ga0070680_100105736 3300005336 Bacteria 2340
8 Ga0070682_100114188 3300005337 Bacteria 1805
9 Ga0070660_100072527 3300005339 Bacteria 2691
10 Ga0070660_100106154 3300005339 Bacteria 2230
11 Ga0070661_100002571 3300005344 Bacteria 12444
12 Ga0070661_100024776 3300005344 Bacteria 4306
13 Ga0070661_100321977 3300005344 Bacteria 1208
14 Ga0070674_100081355 3300005356 Bacteria 2315
15 Ga0070659_100000461 3300005366 Bacteria 30015
16 Ga0070659_100116092 3300005366 Bacteria 2164
17 Ga0070709_10159231 3300005434 Bacteria 1568
18 Ga0070709_10285158 3300005434 Bacteria 1201
19 Ga0070714_100019863 3300005435 Bacteria 5481
20 Ga0070714_100077543 3300005435 Bacteria 2886
21 Ga0070714_100160006 3300005435 Bacteria 2036
22 Ga0070714_100340916 3300005435 Bacteria 1406
23 Ga0070714_100431489 3300005435 Bacteria 1249
24 Ga0070713_100032756 3300005436 Bacteria 4155
25 Ga0070713_100044365 3300005436 Bacteria 3640
26 Ga0070713_100390807 3300005436 Bacteria 1298
27 Ga0070710_10001821 3300005437 Bacteria 10063
28 Ga0070710_10036169 3300005437 Bacteria 2698
29 Ga0070710_10130651 3300005437 Bacteria 1531
30 Ga0070711_100230491 3300005439 Bacteria 1444
31 Ga0070705_100064765 3300005440 Bacteria 2185
32 Ga0070694_100164379 3300005444 Bacteria 1631
33 Ga0070708_100050683 3300005445 Bacteria 3676
34 Ga0070708_100058529 3300005445 Bacteria 3433
35 Ga0070708_100303336 3300005445 Bacteria 1504
36 Ga0070663_100357103 3300005455 Bacteria 1185
37 Ga0070681_10046852 3300005458 Bacteria 4321
38 Ga0070681_10059214 3300005458 Bacteria 3809
39 Ga0068867_100102357 3300005459 Bacteria 2189
40 Ga0070706_100078392 3300005467 Bacteria 3059
41 Ga0070706_100722252 3300005467 Bacteria 923
42 Ga0070707_100005805 3300005468 Bacteria 11514
43 Ga0070707_100155722 3300005468 Bacteria 2226
44 Ga0070707_100279787 3300005468 Bacteria 1622
45 Ga0070707_100431792 3300005468 Bacteria 1278
46 Ga0070698_100002316 3300005471 Bacteria 21071
47 Ga0070698_100006425 3300005471 Bacteria 12745
48 Ga0070698_100072432 3300005471 Bacteria 3453
49 Ga0070698_100338727 3300005471 Bacteria 1435
50 Ga0070698_100509330 3300005471 Bacteria 1142
51 Ga0070698_100771324 3300005471 Bacteria 905
52 Ga0070699_100081921 3300005518 Bacteria 2813
53 Ga0070699_100132984 3300005518 Bacteria 2193
54 Ga0070699_100361988 3300005518 Bacteria 1308
55 Ga0070699_100407607 3300005518 Bacteria 1230
56 Ga0070699_100541547 3300005518 Bacteria 1059
57 Ga0070679_100058232 3300005530 Bacteria 3850
58 Ga0070697_100078196 3300005536 Bacteria 2722
59 Ga0070697_100246488 3300005536 Bacteria 1527
60 Ga0070696_100061513 3300005546 Bacteria 2627
61 Ga0070696_100080068 3300005546 Bacteria 2312
62 Ga0070704_100045678 3300005549 Bacteria 3049
63 Ga0068855_100059622 3300005563 Bacteria 4465
64 Ga0068855_100195246 3300005563 Bacteria 2281
65 Ga0070664_100003710 3300005564 Bacteria 12313
66 Ga0068854_100152337 3300005578 Bacteria 1784
67 Ga0068856_100431050 3300005614 Bacteria 1339
68 Ga0068852_100012063 3300005616 Bacteria 6542
69 Ga0068852_100026675 3300005616 Bacteria 4701
70 Ga0081455_10035522 3300005937 Bacteria 4451
71 Ga0081538_10001086 3300005981 Bacteria 28963
72 Ga0081538_10008541 3300005981 Bacteria 8677
73 Ga0081539_10005721 3300005985 Bacteria 12435
74 Ga0070717_10187160 3300006028 Bacteria 1807
75 Ga0075368_10007790 3300006042 Bacteria 3794
76 Ga0070716_100031451 3300006173 Bacteria 2886
77 Ga0070716_100045572 3300006173 Bacteria 2463
78 Ga0070716_100096861 3300006173 Bacteria 1799
79 Ga0070712_100163644 3300006175 Bacteria 1720
80 Ga0075428_100025840 3300006844 Bacteria 6502
81 Ga0075428_100025924 3300006844 Bacteria 6492
82 Ga0075431_100146010 3300006847 Bacteria 2438
83 Ga0075433_10200294 3300006852 Bacteria 1775
84 Ga0075434_100056263 3300006871 Bacteria 3909
85 Ga0075434_100288112 3300006871 Bacteria 1662
86 Ga0075434_100347126 3300006871 Bacteria 1505
87 Ga0075435_100072549 3300007076 Bacteria 2813
88 Ga0105240_10158476 3300009093 Bacteria 2690
89 Ga0111539_10244261 3300009094 Bacteria 2090
90 Ga0114129_10000763 3300009147 Bacteria 41055
91 Ga0114129_10037454 3300009147 Bacteria 6846
92 Ga0114129_10081532 3300009147 Bacteria 4497
93 Ga0114129_10081913 3300009147 Bacteria 4485
94 Ga0114129_10134959 3300009147 Bacteria 3386
95 Ga0105241_10278947 3300009174 Bacteria 1426
96 Ga0105242_10100683 3300009176 Bacteria 2448
97 Ga0105237_10044631 3300009545 Bacteria 4463
98 Ga0105238_10431812 3300009551 Bacteria 1313
99 Ga0105239_10107025 3300010375 Bacteria 3098
100 Ga0157370_10013168 3300013104 Bacteria 8530
101 Ga0157370_10050720 3300013104 Bacteria 3966
102 Ga0157370_10238402 3300013104 Bacteria 1683
103 Ga0157370_10268259 3300013104 Bacteria 1577
104 Ga0157369_10059479 3300013105 Bacteria 4120
105 Ga0157374_10183237 3300013296 Bacteria 2046
106 Ga0157378_10177856 3300013297 Bacteria 2000
107 Ga0157372_10179504 3300013307 Bacteria 2450
108 Ga0182008_10103269 3300014497 Bacteria 1410
109 Ga0206353_11982293 3300020082 Bacteria 4341
110 Ga0209025_1000141 3300025294 Bacteria 184281
111 Ga0207692_10005032 3300025898 Bacteria 5265
112 Ga0207692_10008875 3300025898 Bacteria 4178
113 Ga0207692_10045191 3300025898 Bacteria 2202
114 Ga0207685_10123765 3300025905 Bacteria 1139
115 Ga0207699_10008278 3300025906 Bacteria 5123
116 Ga0207699_10181171 3300025906 Bacteria 1416
117 Ga0207699_10248006 3300025906 Bacteria 1226
118 Ga0207684_10073382 3300025910 Bacteria 2906
119 Ga0207684_10400901 3300025910 Bacteria 1179
120 Ga0207707_10049133 3300025912 Bacteria 3675
121 Ga0207707_10394741 3300025912 Bacteria 1188
122 Ga0207707_10500374 3300025912 Bacteria 1036
123 Ga0207695_10154310 3300025913 Bacteria 2232
124 Ga0207693_10020383 3300025915 Bacteria 5275
125 Ga0207663_10003367 3300025916 Bacteria 7811
126 Ga0207663_10073464 3300025916 Bacteria 2213
127 Ga0207663_10114916 3300025916 Bacteria 1833
128 Ga0207663_10259510 3300025916 Bacteria 1283
129 Ga0207660_10096560 3300025917 Bacteria 2200
130 Ga0207657_10012119 3300025919 Bacteria 8520
131 Ga0207657_10089271 3300025919 Bacteria 2575
132 Ga0207657_10151858 3300025919 Bacteria 1886
133 Ga0207649_10000267 3300025920 Bacteria 41185
134 Ga0207649_10052811 3300025920 Bacteria 2523
135 Ga0207649_10099772 3300025920 Bacteria 1919
136 Ga0207652_10012351 3300025921 Bacteria 6900
137 Ga0207652_10410054 3300025921 Bacteria 1222
138 Ga0207646_10016135 3300025922 Bacteria 7020
139 Ga0207646_10028682 3300025922 Bacteria 5064
140 Ga0207646_10233969 3300025922 Bacteria 1660
141 Ga0207694_10032060 3300025924 Bacteria 4020
142 Ga0207700_10088015 3300025928 Bacteria 2444
143 Ga0207700_10317371 3300025928 Bacteria 1349
144 Ga0207664_10028382 3300025929 Bacteria 4252
145 Ga0207664_10061291 3300025929 Bacteria 3001
146 Ga0207664_10407721 3300025929 Bacteria 1209
147 Ga0207664_10869492 3300025929 Bacteria 810
148 Ga0207690_10003552 3300025932 Bacteria 9284
149 Ga0207665_10005376 3300025939 Bacteria 8550
150 Ga0207665_10051198 3300025939 Bacteria 2779
151 Ga0207665_10054198 3300025939 Bacteria 2704
152 Ga0207661_10047271 3300025944 Bacteria 3416
153 Ga0207679_10000685 3300025945 Bacteria 22681
154 Ga0207667_10183025 3300025949 Bacteria 2151
155 Ga0207639_10339156 3300026041 Bacteria 1339
156 Ga0207678_10572984 3300026067 Bacteria 988
157 Ga0207648_10369012 3300026089 Bacteria 1296
158 Ga0207698_10098924 3300026142 Bacteria 2411
159 Ga0207698_10143481 3300026142 Bacteria 2061
160 Ga0209995_1027523 3300027471 Bacteria 949
161 Ga0209998_10002552 3300027717 Bacteria 4138
162 Ga0207428_10017356 3300027907 Bacteria 6178
163 Ga0265318_10077944 3300028577 Bacteria 1225
164 Ga0265338_10180867 3300028800 Bacteria 1608
165 Ga0265340_10005264 3300031247 Bacteria 7181
166 Ga0373945_0003217 3300035116 Bacteria 5124
167 Ga0373943_0034075 3300035170 Bacteria 2428
168 Ga0373947_0017720 3300035725 Bacteria 4097
169 Ga0373925_0007769 3300037068 Bacteria 7804
170 Ga0395900_0337120 3300037418 Bacteria 1484
171 Ga0395900_0505864 3300037418 Bacteria 1158
172 Ga0395905_0481993 3300037471 Bacteria 1140
173 Ga0395901_0153134 3300038443 Bacteria 2422
174 Ga0395901_0170576 3300038443 Bacteria 2283
175 Ga0395901_0547745 3300038443 Bacteria 1173
176 Ga0242420_012625 3300038996 Bacteria 1432
177 Ga0436363_1294434 3300039450 Bacteria 1057
178 Ga0451807_0376417 3300041486 Bacteria 1303
179 Ga0451845_0372808 3300041501 Bacteria 918
180 Ga0451853_0203284 3300041512 Bacteria 4011
181 Ga0466969_0002464 3300044656 Bacteria 9881
182 Ga0466965_0033034 3300044683 Bacteria 2528
183 Ga0466966_0017874 3300044684 Bacteria 4682
184 Ga0466966_0023014 3300044684 Bacteria 4082
185 Ga0466966_0077643 3300044684 Bacteria 2072
186 Ga0466966_0371285 3300044684 Bacteria 859
187 Ga0466961_0005199 3300044693 Bacteria 8192
188 Ga0466961_0005552 3300044693 Bacteria 7958
189 Ga0466961_0019956 3300044693 Bacteria 4314
190 Ga0466961_0138722 3300044693 Bacteria 1523
191 Ga0466961_0174918 3300044693 Bacteria 1334
192 Ga0466963_0010165 3300044694 Bacteria 5690
193 Ga0466963_0012682 3300044694 Bacteria 5162
194 Ga0466963_0028995 3300044694 Bacteria 3559
195 Ga0466963_0052250 3300044694 Bacteria 2711
196 Ga0466963_0072715 3300044694 Bacteria 2316
197 Ga0466964_0002966 3300044706 Bacteria 6136
198 Ga0466964_0268952 3300044706 Bacteria 847
199 Ga0466971_0007008 3300044719 Bacteria 4906
200 Ga0466971_0027284 3300044719 Bacteria 2557
201 Ga0466971_0052798 3300044719 Bacteria 1831
202 Ga0466971_0210533 3300044719 Bacteria 919
203 Ga0466968_0002159 3300044735 Bacteria 7177
204 Ga0466970_0001928 3300044765 Bacteria 10035
205 Ga0466957_0003234 3300044842 Bacteria 8912
206 Ga0466957_0008283 3300044842 Bacteria 5911
207 Ga0466957_0041207 3300044842 Bacteria 2792
208 Ga0466957_0097892 3300044842 Bacteria 1845
209 Ga0466959_0019519 3300045049 Bacteria 4985
210 Ga0466959_0117262 3300045049 Bacteria 1895
211 Ga0466958_0005004 3300045836 Bacteria 7077
212 Ga0466958_0050909 3300045836 Bacteria 2507
213 Ga0466958_0088610 3300045836 Bacteria 1912
214 Ga0466958_0098719 3300045836 Bacteria 1813
215 Ga0466967_0004031 3300045976 Bacteria 9798
216 Ga0466967_0074592 3300045976 Bacteria 3047
217 Ga0466967_0090138 3300045976 Bacteria 2785
218 Ga0466967_0210240 3300045976 Bacteria 1845
219 Ga0466967_0309607 3300045976 Bacteria 1521
220 Ga0466967_0393340 3300045976 Bacteria 1348
221 Ga0466967_0535730 3300045976 Bacteria 1151
222 Ga0495653_0144124 3300046463 Bacteria 1672
223 Ga0495580_0012848 3300046472 Bacteria 6417
224 Ga0495582_0055573 3300046473 Bacteria 2182
225 Ga0495582_0250004 3300046473 Bacteria 1017
226 Ga0495630_0048025 3300046517 Bacteria 3194
227 Ga0495630_0101878 3300046517 Bacteria 2172
228 Ga0495630_0127373 3300046517 Bacteria 1933
229 Ga0495647_0188639 3300046681 Bacteria 900
230 Ga0495658_0070188 3300046683 Bacteria 2032
231 Ga0495613_0265577 3300046689 Bacteria 1194
232 Ga0495674_0717969 3300047319 Bacteria 783
233 Ga0495680_0335754 3300047322 Bacteria 1055
234 Ga0495684_0153978 3300047471 Bacteria 1718
235 Ga0495602_0271154 3300048088 Bacteria 1254
236 Ga0496108_0147080 3300048911 Bacteria 2032
237 Ga0496108_0397452 3300048911 Bacteria 1204
238 Ga0496110_0083703 3300048913 Bacteria 2846
239 Ga0496110_0263444 3300048913 Bacteria 1569
240 Ga0496111_0303609 3300048914 Bacteria 1183
241 Ga0496111_0431539 3300048914 Bacteria 973
242 Ga0496112_0012742 3300048915 Bacteria 7735
243 Ga0496112_0082805 3300048915 Bacteria 3173
244 Ga0496112_0124364 3300048915 Bacteria 2550
245 Ga0496113_0244805 3300048916 Bacteria 1431
246 Ga0501034_0006133 3300049571 Bacteria 12964
247 Ga0501067_0418237 3300049583 Bacteria 748
248 Ga0501068_0047611 3300049584 Bacteria 2587
249 Ga0501069_0216589 3300049585 Bacteria 1112
250 Ga0501072_0014013 3300049588 Bacteria 6144
251 Ga0501080_0044866 3300049742 Bacteria 4114
252 Ga0501080_0195862 3300049742 Bacteria 1856
253 Ga0501083_0025656 3300049744 Bacteria 4080
254 nmdc:mga06z11_3513_c1 3300050494 Bacteria 6071
255 nmdc:mga05p37_13796_c1 3300050507 Bacteria 9682
256 nmdc:mga05p37_164965_c1 3300050507 Bacteria 2704
257 nmdc:mga05p37_46978_c1 3300050507 Bacteria 5309
258 nmdc:mga05p37_519348_c1 3300050507 Bacteria 1363
259 nmdc:mga09592_25565_c1 3300050508 Bacteria 4889
260 nmdc:mga06r32_85075_c1 3300050510 Bacteria 3083
261 nmdc:mga08y16_274842_c1 3300050511 Bacteria 1739
262 nmdc:mga0n895_21805_c1 3300050512 Bacteria 5996
263 nmdc:mga0a205_196823_c1 3300050515 Bacteria 1906
264 Ga0495601_0165333 3300053077 Bacteria 1446
265 Ga0495619_0161473 3300053085 Bacteria 1548
266 Ga0501084_0018138 3300054114 Bacteria 5862
267 Ga0466962_0002139 3300061719 Bacteria 9330
268 Ga0466962_0029093 3300061719 Bacteria 2644
269 Ga0466962_0050299 3300061719 Bacteria 1992
270 Ga0466962_0241897 3300061719 Bacteria 886
271 2791914499 2791354901 Bacteria 8322202
272 2855734707 2855730933 Bacteria 7047938
273 2855770491 2855767633 Bacteria 7049357
274 2881413065 2881412998 Bacteria 6492157
275 Ga0207664_10229935
276 JGI25151J46595_10000353
277 Ga0070658_10014020
278 Ga0070683_100070453
279 Ga0070683_100097832
280 Ga0070683_100205475
281 Ga0070680_100105736
282 Ga0070682_100114188
283 Ga0070660_100072527
284 Ga0070660_100106154
285 Ga0070661_100002571
286 Ga0070661_100024776
287 Ga0070661_100321977
288 Ga0070674_100081355
289 Ga0070659_100000461
290 Ga0070659_100116092
291 Ga0070709_10159231
292 Ga0070709_10285158
293 Ga0070714_100019863
294 Ga0070714_100077543
295 Ga0070714_100160006
296 Ga0070714_100340916
297 Ga0070714_100431489
298 Ga0070713_100032756
299 Ga0070713_100044365
300 Ga0070713_100390807
301 Ga0070710_10001821
302 Ga0070710_10036169
303 Ga0070710_10130651
304 Ga0070711_100230491
305 Ga0070705_100064765
306 Ga0070694_100164379
307 Ga0070708_100050683
308 Ga0070708_100058529
309 Ga0070708_100303336
310 Ga0070663_100357103
311 Ga0070681_10046852
312 Ga0070681_10059214
313 Ga0068867_100102357
314 Ga0070706_100078392
315 Ga0070706_100722252
316 Ga0070707_100005805
317 Ga0070707_100155722
318 Ga0070707_100279787
319 Ga0070707_100431792
320 Ga0070698_100002316
321 Ga0070698_100006425
322 Ga0070698_100072432
323 Ga0070698_100338727
324 Ga0070698_100509330
325 Ga0070698_100771324
326 Ga0070699_100081921
327 Ga0070699_100132984
328 Ga0070699_100361988
329 Ga0070699_100407607
330 Ga0070699_100541547
331 Ga0070679_100058232
332 Ga0070697_100078196
333 Ga0070697_100246488
334 Ga0070696_100061513
335 Ga0070696_100080068
336 Ga0070704_100045678
337 Ga0068855_100059622
338 Ga0068855_100195246
339 Ga0070664_100003710
340 Ga0068854_100152337
341 Ga0068856_100431050
342 Ga0068852_100012063
343 Ga0068852_100026675
344 Ga0081455_10035522
345 Ga0081538_10001086
346 Ga0081538_10008541
347 Ga0081539_10005721
348 Ga0070717_10187160
349 Ga0075368_10007790
350 Ga0070716_100031451
351 Ga0070716_100045572
352 Ga0070716_100096861
353 Ga0070712_100163644
354 Ga0075428_100025840
355 Ga0075428_100025924
356 Ga0075431_100146010
357 Ga0075433_10200294
358 Ga0075434_100056263
359 Ga0075434_100288112
360 Ga0075434_100347126
361 Ga0075435_100072549
362 Ga0105240_10158476
363 Ga0111539_10244261
364 Ga0114129_10000763
365 Ga0114129_10037454
366 Ga0114129_10081532
367 Ga0114129_10081913
368 Ga0114129_10134959
369 Ga0105241_10278947
370 Ga0105242_10100683
371 Ga0105237_10044631
372 Ga0105238_10431812
373 Ga0105239_10107025
374 Ga0157370_10013168
375 Ga0157370_10050720
376 Ga0157370_10238402
377 Ga0157370_10268259
378 Ga0157369_10059479
379 Ga0157374_10183237
380 Ga0157378_10177856
381 Ga0157372_10179504
382 Ga0182008_10103269
383 Ga0206353_11982293
384 Ga0209025_1000141
385 Ga0207692_10005032
386 Ga0207692_10008875
387 Ga0207692_10045191
388 Ga0207685_10123765
389 Ga0207699_10008278
390 Ga0207699_10181171
391 Ga0207699_10248006
392 Ga0207684_10073382
393 Ga0207684_10400901
394 Ga0207707_10049133
395 Ga0207707_10394741
396 Ga0207707_10500374
397 Ga0207695_10154310
398 Ga0207693_10020383
399 Ga0207663_10003367
400 Ga0207663_10073464
401 Ga0207663_10114916
402 Ga0207663_10259510
403 Ga0207660_10096560
404 Ga0207657_10012119
405 Ga0207657_10089271
406 Ga0207657_10151858
407 Ga0207649_10000267
408 Ga0207649_10052811
409 Ga0207649_10099772
410 Ga0207652_10012351
411 Ga0207652_10410054
412 Ga0207646_10016135
413 Ga0207646_10028682
414 Ga0207646_10233969
415 Ga0207694_10032060
416 Ga0207700_10088015
417 Ga0207700_10317371
418 Ga0207664_10028382
419 Ga0207664_10061291
420 Ga0207664_10407721
421 Ga0207664_10869492
422 Ga0207690_10003552
423 Ga0207665_10005376
424 Ga0207665_10051198
425 Ga0207665_10054198
426 Ga0207661_10047271
427 Ga0207679_10000685
428 Ga0207667_10183025
429 Ga0207639_10339156
430 Ga0207678_10572984
431 Ga0207648_10369012
432 Ga0207698_10098924
433 Ga0207698_10143481
434 Ga0209995_1027523
435 Ga0209998_10002552
436 Ga0207428_10017356
437 Ga0265318_10077944
438 Ga0265338_10180867
439 Ga0265340_10005264
440 Ga0373945_0003217
441 Ga0373943_0034075
442 Ga0373947_0017720
443 Ga0373925_0007769
444 Ga0395900_0337120
445 Ga0395900_0505864
446 Ga0395905_0481993
447 Ga0395901_0153134
448 Ga0395901_0170576
449 Ga0395901_0547745
450 Ga0242420_012625
451 Ga0436363_1294434
452 Ga0451807_0376417
453 Ga0451845_0372808
454 Ga0451853_0203284
455 Ga0466969_0002464
456 Ga0466965_0033034
457 Ga0466966_0017874
458 Ga0466966_0023014
459 Ga0466966_0077643
460 Ga0466966_0371285
461 Ga0466961_0005199
462 Ga0466961_0005552
463 Ga0466961_0019956
464 Ga0466961_0138722
465 Ga0466961_0174918
466 Ga0466963_0010165
467 Ga0466963_0012682
468 Ga0466963_0028995
469 Ga0466963_0052250
470 Ga0466963_0072715
471 Ga0466964_0002966
472 Ga0466964_0268952
473 Ga0466971_0007008
474 Ga0466971_0027284
475 Ga0466971_0052798
476 Ga0466971_0210533
477 Ga0466968_0002159
478 Ga0466970_0001928
479 Ga0466957_0003234
480 Ga0466957_0008283
481 Ga0466957_0041207
482 Ga0466957_0097892
483 Ga0466959_0019519
484 Ga0466959_0117262
485 Ga0466958_0005004
486 Ga0466958_0050909
487 Ga0466958_0088610
488 Ga0466958_0098719
489 Ga0466967_0004031
490 Ga0466967_0074592
491 Ga0466967_0090138
492 Ga0466967_0210240
493 Ga0466967_0309607
494 Ga0466967_0393340
495 Ga0466967_0535730
496 Ga0495653_0144124
497 Ga0495580_0012848
498 Ga0495582_0055573
499 Ga0495582_0250004
500 Ga0495630_0048025
501 Ga0495630_0101878
502 Ga0495630_0127373
503 Ga0495647_0188639
504 Ga0495658_0070188
505 Ga0495613_0265577
506 Ga0495674_0717969
507 Ga0495680_0335754
508 Ga0495684_0153978
509 Ga0495602_0271154
510 Ga0496108_0147080
511 Ga0496108_0397452
512 Ga0496110_0083703
513 Ga0496110_0263444
514 Ga0496111_0303609
515 Ga0496111_0431539
516 Ga0496112_0012742
517 Ga0496112_0082805
518 Ga0496112_0124364
519 Ga0496113_0244805
520 Ga0501034_0006133
521 Ga0501067_0418237
522 Ga0501068_0047611
523 Ga0501069_0216589
524 Ga0501072_0014013
525 Ga0501080_0044866
526 Ga0501080_0195862
527 Ga0501083_0025656
528 nmdc:mga06z11_3513_c1
529 nmdc:mga05p37_13796_c1
530 nmdc:mga05p37_164965_c1
531 nmdc:mga05p37_46978_c1
532 nmdc:mga05p37_519348_c1
533 nmdc:mga09592_25565_c1
534 nmdc:mga06r32_85075_c1
535 nmdc:mga08y16_274842_c1
536 nmdc:mga0n895_21805_c1
537 nmdc:mga0a205_196823_c1
538 Ga0495601_0165333
539 Ga0495619_0161473
540 Ga0501084_0018138
541 Ga0466962_0002139
542 Ga0466962_0029093
543 Ga0466962_0050299
544 Ga0466962_0241897
545 2791914499
546 2855734707
547 2855770491
548 2881413065

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

29

139

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

171

246

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zwm-assembly1.cif.gz_B crystal structure of yycf receiver domain from bacillus subtilis 0.9807 2 116
3t6k-assembly2.cif.gz_B crystal structure of a putative response regulator (caur_3799) from chloroflexus aurantiacus j-10-fl at 1.86 a resolution 0.9746 2 116
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9719 2 116
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9712 2 116
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9703 2 118
ID Description Score Start End Superfamily
af_P69228_9_89_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9898 2 78 3.40.50.2300
af_P9WGM7_2_84_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9827 2 78 3.40.50.2300
af_Q2FY79_1_81_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9798 2 78 3.40.50.2300
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9782 2 78 3.40.50.2300
af_P76340_1_79_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9723 2 78 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3E2CPW0-F1-model_v4 DNA-binding response regulator 0.9717 2 119 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-J3A137-F1-model_v4 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain 0.9657 2 122 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2N4YUN8-F1-model_v4 DNA-binding response regulator 0.9646 2 122 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A349M0D6-F1-model_v4 DNA-binding response regulator 0.963 2 116 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A6I4ZGG4-F1-model_v4 Response regulator transcription factor 0.9594 2 124 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map