F379850

General Info

Members Datasets Scaffolds Average Seq Length
274 166 271 450

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10097703|Ga0307414_100977032
Length 495
Sequence MKLPSPTGGYRHPQPAGTALPRVVIVGCGFGGIEAVRRLSRDPVEITLIDRTNHHLFQPLLYQVATAGLSAPAISAPIRHTLRREMKRGNLTILQAEVVDIDAVQRRVLLDGHGVGTEALPYDHLIVAAGATHSYFGHDDWAAHAPGLKTLDDAFRIRARVIGAFERAERCLDASERESWMTFVVIGAGPTGVEMAGTMTEIAQHTLPQEFRRIDSTDARVVLLEGSDRVLGSFVPMLSQRAREQLGRLGVDVRTGCKVTHIDADGVNYETRDGAAVKTFRVPSKTVIWAAGVAASRLGKALAASAGATLDRAGRVIVRPDLSVNGHPEIAVIGDLASALSYPADPTRDKPVPVPGVSPAAKQMGRAAAANLRRRLRGEPTVPFRYIDYGNLATVGRKAAVVDLTVPKLGALRFSGYFAWLFWLFAHIWFLIGFRNRLIVMLDWAWAYWTYERSARVVAEPAPATPPARLVAEAPSSAASHERDLPGAAASRSAS

Samples

Sample ID Description Type Environment
1 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
2 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
3 2643221660 Methylibium sp. Root1272 Isolate Unclassified
4 3300003347 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
53 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
54 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
97 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
101 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
102 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
107 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
112 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
113 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
114 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
115 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
116 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
121 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
122 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
123 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
124 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
125 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
126 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
127 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
128 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
133 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
134 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
148 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
152 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
157 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
158 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
159 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
160 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
165 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
166 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.91
Metatranscriptomes 0
Isolates 1.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.41
Nodule 0
Rhizoplane 2.92
Rhizosphere 75.18
Stem 0
Stem Tuber 0
Unclassified 9.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI26128J50194_1000177 3300003347 Bacteria 2885
2 Ga0070658_10145317 3300005327 Bacteria 1983
3 Ga0070676_10022434 3300005328 Bacteria 3539
4 Ga0070670_100002413 3300005331 Bacteria 15410
5 Ga0070670_100021667 3300005331 Bacteria 5525
6 Ga0070670_100032024 3300005331 Bacteria 4527
7 Ga0070677_10002766 3300005333 Bacteria 5614
8 Ga0070677_10023190 3300005333 Bacteria 2295
9 Ga0068868_100004844 3300005338 Bacteria 9449
10 Ga0070668_100085886 3300005347 Bacteria 2473
11 Ga0070669_100095703 3300005353 Bacteria 2233
12 Ga0070669_100106732 3300005353 Bacteria 2120
13 Ga0070675_100001241 3300005354 Bacteria 18584
14 Ga0070675_100017376 3300005354 Bacteria 5715
15 Ga0070671_100002882 3300005355 Bacteria 13393
16 Ga0070671_100015996 3300005355 Bacteria 6061
17 Ga0070674_100006715 3300005356 Bacteria 6733
18 Ga0070673_100114709 3300005364 Bacteria 2239
19 Ga0070673_100128798 3300005364 Bacteria 2121
20 Ga0070673_100150462 3300005364 Bacteria 1971
21 Ga0070673_100150589 3300005364 Bacteria 1970
22 Ga0070667_100004547 3300005367 Bacteria 11672
23 Ga0070667_100132846 3300005367 Bacteria 2174
24 Ga0070663_100014047 3300005455 Bacteria 5129
25 Ga0070663_100064184 3300005455 Bacteria 2654
26 Ga0070663_100112261 3300005455 Bacteria 2050
27 Ga0070678_100000793 3300005456 Bacteria 15866
28 Ga0070678_100052239 3300005456 Bacteria 2967
29 Ga0070678_100073439 3300005456 Bacteria 2567
30 Ga0070662_100004277 3300005457 Bacteria 9011
31 Ga0068867_100000090 3300005459 Bacteria 57958
32 Ga0068867_100000998 3300005459 Bacteria 19298
33 Ga0068867_100023427 3300005459 Bacteria 4419
34 Ga0070706_100001419 3300005467 Bacteria 25378
35 Ga0070679_100079040 3300005530 Bacteria 3278
36 Ga0068853_100020499 3300005539 Bacteria 5498
37 Ga0070672_100000138 3300005543 Bacteria 38912
38 Ga0070672_100031849 3300005543 Bacteria 3974
39 Ga0070672_100035935 3300005543 Bacteria 3770
40 Ga0070672_100040739 3300005543 Bacteria 3566
41 Ga0070665_100202919 3300005548 Bacteria 1983
42 Ga0068855_100083208 3300005563 Bacteria 3707
43 Ga0070664_100063765 3300005564 Bacteria 3142
44 Ga0070664_100073719 3300005564 Bacteria 2929
45 Ga0070664_100258514 3300005564 Bacteria 1566
46 Ga0068857_100003898 3300005577 Bacteria 12559
47 Ga0068854_100052544 3300005578 Bacteria 2922
48 Ga0068856_100089659 3300005614 Bacteria 3058
49 Ga0068852_100004642 3300005616 Bacteria 9736
50 Ga0068852_100014071 3300005616 Bacteria 6142
51 Ga0068852_100040191 3300005616 Bacteria 3944
52 Ga0068852_100045317 3300005616 Bacteria 3740
53 Ga0068864_100011154 3300005618 Bacteria 7428
54 Ga0068864_100037311 3300005618 Bacteria 4147
55 Ga0068864_100057849 3300005618 Bacteria 3350
56 Ga0068864_100214683 3300005618 Bacteria 1773
57 Ga0068851_10029044 3300005834 Bacteria 2735
58 Ga0068863_100009872 3300005841 Bacteria 9296
59 Ga0068863_100057392 3300005841 Bacteria 3685
60 Ga0068863_100107372 3300005841 Bacteria 2656
61 Ga0075368_10058159 3300006042 Bacteria 1544
62 Ga0075364_10073955 3300006051 Bacteria 2247
63 Ga0070712_100023537 3300006175 Bacteria 4070
64 Ga0075362_10002008 3300006177 Bacteria 6698
65 Ga0075367_10005569 3300006178 Bacteria 6274
66 Ga0075366_10000636 3300006195 Bacteria 16506
67 Ga0075366_10001030 3300006195 Bacteria 13676
68 Ga0075366_10058968 3300006195 Bacteria 2280
69 Ga0097621_100028442 3300006237 Bacteria 4405
70 Ga0097621_100030712 3300006237 Bacteria 4257
71 Ga0097621_100147931 3300006237 Bacteria 2013
72 Ga0075370_10000233 3300006353 Bacteria 19925
73 Ga0075370_10000532 3300006353 Bacteria 14592
74 Ga0075370_10011406 3300006353 Bacteria 4668
75 Ga0075370_10092184 3300006353 Bacteria 1748
76 Ga0068871_100014195 3300006358 Bacteria 5930
77 Ga0068871_100062965 3300006358 Bacteria 3032
78 Ga0075429_100079851 3300006880 Bacteria 2851
79 Ga0068865_100168875 3300006881 Bacteria 1675
80 Ga0105240_10023938 3300009093 Bacteria 8066
81 Ga0105243_10001009 3300009148 Bacteria 26043
82 Ga0105237_10003508 3300009545 Bacteria 18610
83 Ga0105249_10051377 3300009553 Bacteria 3760
84 Ga0105239_10041344 3300010375 Bacteria 5053
85 Ga0157375_10002405 3300013308 Bacteria 16211
86 Ga0157375_10039451 3300013308 Bacteria 4545
87 Ga0157380_10004073 3300014326 Bacteria 10089
88 Ga0157377_10000226 3300014745 Bacteria 29529
89 Ga0157379_10105026 3300014968 Bacteria 2535
90 Ga0157376_10026123 3300014969 Bacteria 4610
91 Ga0157376_10178743 3300014969 Bacteria 1938
92 Ga0163161_10018495 3300017792 Bacteria 4882
93 Ga0207697_10009325 3300025315 Bacteria 4247
94 Ga0207697_10024853 3300025315 Bacteria 2451
95 Ga0207682_10001707 3300025893 Bacteria 10050
96 Ga0207645_10000749 3300025907 Bacteria 27006
97 Ga0207645_10009380 3300025907 Bacteria 6772
98 Ga0207645_10099407 3300025907 Bacteria 1876
99 Ga0207705_10081991 3300025909 Bacteria 2352
100 Ga0207695_10150490 3300025913 Bacteria 2267
101 Ga0207693_10027760 3300025915 Bacteria 4474
102 Ga0207646_10073889 3300025922 Bacteria 3045
103 Ga0207650_10000856 3300025925 Bacteria 23101
104 Ga0207650_10018868 3300025925 Bacteria 4845
105 Ga0207650_10032966 3300025925 Bacteria 3749
106 Ga0207650_10038254 3300025925 Bacteria 3502
107 Ga0207659_10000472 3300025926 Bacteria 24128
108 Ga0207659_10107304 3300025926 Bacteria 2116
109 Ga0207644_10003314 3300025931 Bacteria 10400
110 Ga0207644_10105926 3300025931 Bacteria 2119
111 Ga0207644_10115988 3300025931 Bacteria 2032
112 Ga0207706_10002414 3300025933 Bacteria 18226
113 Ga0207706_10139652 3300025933 Bacteria 2131
114 Ga0207686_10090765 3300025934 Bacteria 2016
115 Ga0207709_10006428 3300025935 Bacteria 6596
116 Ga0207669_10001431 3300025937 Bacteria 10174
117 Ga0207669_10071007 3300025937 Bacteria 2186
118 Ga0207669_10128436 3300025937 Bacteria 1736
119 Ga0207691_10006000 3300025940 Bacteria 11733
120 Ga0207691_10006244 3300025940 Bacteria 11511
121 Ga0207691_10030768 3300025940 Bacteria 5014
122 Ga0207691_10108444 3300025940 Bacteria 2471
123 Ga0207689_10089759 3300025942 Bacteria 2524
124 Ga0207661_10026235 3300025944 Bacteria 4437
125 Ga0207679_10028374 3300025945 Bacteria 3883
126 Ga0207667_10186667 3300025949 Bacteria 2128
127 Ga0207651_10001018 3300025960 Bacteria 12399
128 Ga0207651_10032324 3300025960 Bacteria 3359
129 Ga0207651_10122844 3300025960 Bacteria 1972
130 Ga0207651_10148639 3300025960 Bacteria 1820
131 Ga0207640_10038999 3300025981 Bacteria 3003
132 Ga0207658_10003409 3300025986 Bacteria 11255
133 Ga0207658_10032317 3300025986 Bacteria 3724
134 Ga0207677_10032980 3300026023 Bacteria 3335
135 Ga0207677_10055566 3300026023 Bacteria 2708
136 Ga0207639_10183530 3300026041 Bacteria 1781
137 Ga0207678_10004330 3300026067 Bacteria 12740
138 Ga0207678_10091010 3300026067 Bacteria 2607
139 Ga0207678_10218755 3300026067 Bacteria 1630
140 Ga0207708_10212470 3300026075 Bacteria 1547
141 Ga0207702_10132677 3300026078 Bacteria 2243
142 Ga0207641_10026949 3300026088 Bacteria 4746
143 Ga0207641_10064633 3300026088 Bacteria 3128
144 Ga0207641_10073462 3300026088 Bacteria 2947
145 Ga0207648_10001570 3300026089 Bacteria 25076
146 Ga0207648_10002213 3300026089 Bacteria 21073
147 Ga0207648_10002437 3300026089 Bacteria 20009
148 Ga0207648_10013856 3300026089 Bacteria 7480
149 Ga0207648_10093259 3300026089 Bacteria 2633
150 Ga0207648_10166507 3300026089 Bacteria 1948
151 Ga0207676_10011440 3300026095 Bacteria 6342
152 Ga0207676_10191385 3300026095 Bacteria 1800
153 Ga0207674_10023188 3300026116 Bacteria 6652
154 Ga0207674_10071657 3300026116 Bacteria 3481
155 Ga0207675_100055599 3300026118 Bacteria 3693
156 Ga0207675_100096150 3300026118 Bacteria 2788
157 Ga0207683_10008523 3300026121 Bacteria 8777
158 Ga0207683_10039659 3300026121 Bacteria 4109
159 Ga0207683_10098778 3300026121 Bacteria 2605
160 Ga0207683_10193708 3300026121 Bacteria 1846
161 Ga0207698_10002092 3300026142 Bacteria 11778
162 Ga0207698_10004626 3300026142 Bacteria 8406
163 Ga0207698_10099645 3300026142 Bacteria 2404
164 Ga0209968_1003203 3300027526 Bacteria 2455
165 Ga0209966_1000006 3300027695 Bacteria 102095
166 Ga0268266_10029921 3300028379 Bacteria 4628
167 Ga0307517_10039969 3300028786 Bacteria 5129
168 Ga0307515_10000268 3300028794 Bacteria 127614
169 Ga0307515_10002729 3300028794 Bacteria 37758
170 Ga0307515_10002746 3300028794 Bacteria 37637
171 Ga0307515_10009364 3300028794 Bacteria 18948
172 Ga0307512_10037634 3300030522 Bacteria 4083
173 Ga0307513_10082101 3300031456 Bacteria 3319
174 Ga0307513_10195757 3300031456 Bacteria 1867
175 Ga0307509_10000181 3300031507 Bacteria 98346
176 Ga0307509_10016006 3300031507 Bacteria 8705
177 Ga0307509_10030940 3300031507 Bacteria 5914
178 Ga0307509_10056863 3300031507 Bacteria 4150
179 Ga0307509_10089016 3300031507 Bacteria 3167
180 Ga0307408_100000298 3300031548 Bacteria 47947
181 Ga0307408_100031672 3300031548 Bacteria 3684
182 Ga0307508_10000007 3300031616 Bacteria 268359
183 Ga0307508_10003540 3300031616 Bacteria 15744
184 Ga0307508_10005132 3300031616 Bacteria 12545
185 Ga0307508_10119070 3300031616 Bacteria 2242
186 Ga0307514_10041717 3300031649 Bacteria 3612
187 Ga0307516_10048514 3300031730 Bacteria 4178
188 Ga0307516_10060323 3300031730 Bacteria 3686
189 Ga0307406_10000234 3300031901 Bacteria 33721
190 Ga0307406_10014488 3300031901 Bacteria 4539
191 Ga0307416_100115548 3300032002 Bacteria 2377
192 Ga0307414_10097703 3300032004 Bacteria 2201
193 Ga0307507_10139233 3300033179 Bacteria 1867
194 Ga0307510_10088679 3300033180 Bacteria 2951
195 Ga0373931_0003096 3300035691 Bacteria 7440
196 Ga0395905_0005191 3300037471 Bacteria 13348
197 Ga0395905_0008659 3300037471 Bacteria 10022
198 Ga0395901_0234766 3300038443 Bacteria 1914
199 Ga0451802_0496628 3300041460 Bacteria 4288
200 Ga0451841_1394724 3300041498 Bacteria 3340
201 Ga0450898_001022 3300042134 Bacteria 3542
202 Ga0439434_0012706 3300042435 Bacteria 2494
203 Ga0466969_0000024 3300044656 Bacteria 96283
204 Ga0466969_0018331 3300044656 Bacteria 3647
205 Ga0466972_0002385 3300044658 Bacteria 9268
206 Ga0466972_0075573 3300044658 Bacteria 1605
207 Ga0466965_0008345 3300044683 Bacteria 4790
208 Ga0466965_0022224 3300044683 Bacteria 3058
209 Ga0466961_0014387 3300044693 Bacteria 5078
210 Ga0466961_0072434 3300044693 Bacteria 2185
211 Ga0453684_0017627 3300044712 Bacteria 11041
212 Ga0466971_0041736 3300044719 Bacteria 2061
213 Ga0466970_0053876 3300044765 Bacteria 2148
214 Ga0466959_0032548 3300045049 Bacteria 3859
215 Ga0495592_0000461 3300046454 Bacteria 30148
216 Ga0495632_0002774 3300046519 Bacteria 13016
217 Ga0495632_0028813 3300046519 Bacteria 2896
218 Ga0495643_0014074 3300046522 Bacteria 4770
219 Ga0495643_0037854 3300046522 Bacteria 2644
220 Ga0495642_0009443 3300046528 Bacteria 3734
221 Ga0495598_0004318 3300046537 Bacteria 3072
222 Ga0495597_0004588 3300046542 Bacteria 7541
223 Ga0495668_0023596 3300046616 Bacteria 3506
224 Ga0495625_0001627 3300046660 Bacteria 26478
225 Ga0495661_0002155 3300046665 Bacteria 15401
226 Ga0495669_0035755 3300046684 Bacteria 2194
227 Ga0495649_0026471 3300046694 Bacteria 3224
228 Ga0495660_0006076 3300046810 Bacteria 7171
229 Ga0495676_0071681 3300047321 Bacteria 2663
230 Ga0495687_000272 3300047443 Bacteria 68390
231 Ga0496101_0131970 3300048904 Bacteria 1897
232 Ga0496102_0006123 3300048905 Bacteria 10251
233 Ga0496102_0017368 3300048905 Bacteria 6302
234 Ga0496106_0094713 3300048909 Bacteria 2309
235 Ga0496108_0028451 3300048911 Bacteria 4625
236 Ga0496110_0134233 3300048913 Bacteria 2236
237 Ga0496110_0249278 3300048913 Bacteria 1616
238 Ga0496121_0097516 3300048924 Bacteria 2278
239 Ga0501043_0000517 3300049579 Bacteria 34673
240 Ga0501046_0000363 3300049580 Bacteria 45740
241 Ga0501047_0000137 3300049581 Bacteria 89064
242 Ga0501048_0001592 3300049582 Bacteria 17236
243 Ga0501198_000001 3300049649 Bacteria 234552
244 Ga0501222_000013 3300049662 Bacteria 87490
245 Ga0501044_0077350 3300049823 Bacteria 3375
246 Ga0501045_0001841 3300049824 Bacteria 14327
247 nmdc:mga03683_82795_c1 3300050489 Bacteria 1388
248 nmdc:mga0k408_1811_c1 3300050493 Bacteria 11474
249 nmdc:mga0k408_18950_c1 3300050493 Bacteria 3843
250 nmdc:mga0k408_193_c1 3300050493 Bacteria 19888
251 nmdc:mga0k408_23140_c1 3300050493 Bacteria 3502
252 nmdc:mga0k408_31763_c1 3300050493 Bacteria 3017
253 nmdc:mga0k408_41641_c1 3300050493 Bacteria 2645
254 nmdc:mga0k408_699_c1 3300050493 Bacteria 18347
255 nmdc:mga06z11_86879_c1 3300050494 Bacteria 1690
256 nmdc:mga07m45_42_c1 3300050496 Bacteria 58731
257 nmdc:mga07m45_49005_c1 3300050496 Bacteria 2377
258 nmdc:mga07m45_5053_c1 3300050496 Bacteria 5670
259 nmdc:mga07m45_9453_c1 3300050496 Bacteria 5059
260 nmdc:mga09592_81676_c1 3300050508 Bacteria 2754
261 nmdc:mga0sz30_41834_c1 3300050516 Bacteria 1927
262 Ga0500578_0039590 3300053086 Bacteria 3029
263 Ga0500593_000152 3300053117 Bacteria 27719
264 Ga0500655_004175 3300053133 Bacteria 2602
265 Ga0500658_0013196 3300053134 Bacteria 3051
266 Ga0500559_0000061 3300053136 Bacteria 87246
267 Ga0500619_000004 3300053154 Bacteria 98915
268 Ga0500622_0008078 3300053156 Bacteria 5920
269 Ga0500645_001316 3300053730 Bacteria 12883
270 Ga0500587_000075 3300053739 Bacteria 8169
271 Ga0466962_0014502 3300061719 Bacteria 3798

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050489 nmdc:mga03683_82795_c1 nmdc:mga03683_82795_c1_21_1169 371
2 3300025931 Ga0207644_10105926 Ga0207644_101059262 409
3 3300005364 Ga0070673_100150589 Ga0070673_1001505891 416
4 3300005455 Ga0070663_100064184 Ga0070663_1000641842 418
5 3300006178 Ga0075367_10005569 Ga0075367_100055695 418
6 3300031730 Ga0307516_10048514 Ga0307516_100485142 421
7 3300037471 Ga0395905_0008659 Ga0395905_0008659_3666_4982 422
8 3300038443 Ga0395901_0234766 Ga0395901_0234766_426_1748 423
9 3300046522 Ga0495643_0014074 Ga0495643_0014074_626_1954 423
10 3300046528 Ga0495642_0009443 Ga0495642_0009443_1228_2556 423
11 3300046665 Ga0495661_0002155 Ga0495661_0002155_9098_10426 423
12 3300048904 Ga0496101_0131970 Ga0496101_0131970_141_1451 423
13 3300048911 Ga0496108_0028451 Ga0496108_0028451_617_1957 423
14 3300048913 Ga0496110_0134233 Ga0496110_0134233_591_1901 423
15 3300048913 Ga0496110_0249278 Ga0496110_0249278_127_1437 423
16 3300005530 Ga0070679_100079040 Ga0070679_1000790402 424
17 3300005563 Ga0068855_100083208 Ga0068855_1000832081 424
18 3300009093 Ga0105240_10023938 Ga0105240_100239389 424
19 3300025913 Ga0207695_10150490 Ga0207695_101504902 424
20 3300025933 Ga0207706_10139652 Ga0207706_101396522 424
21 3300025940 Ga0207691_10030768 Ga0207691_100307683 424
22 3300025949 Ga0207667_10186667 Ga0207667_101866672 424
23 3300026121 Ga0207683_10039659 Ga0207683_100396592 424
24 3300006175 Ga0070712_100023537 Ga0070712_1000235372 425
25 3300025915 Ga0207693_10027760 Ga0207693_100277602 425
26 3300005618 Ga0068864_100214683 Ga0068864_1002146832 426
27 3300026095 Ga0207676_10191385 Ga0207676_101913851 426
28 3300005577 Ga0068857_100003898 Ga0068857_1000038986 429
29 3300006880 Ga0075429_100079851 Ga0075429_1000798513 429
30 3300009545 Ga0105237_10003508 Ga0105237_1000350813 429
31 3300025942 Ga0207689_10089759 Ga0207689_100897593 429
32 3300026116 Ga0207674_10023188 Ga0207674_100231886 429
33 3300046519 Ga0495632_0002774 Ga0495632_0002774_9993_11366 429
34 3300046694 Ga0495649_0026471 Ga0495649_0026471_500_1873 429
35 3300046810 Ga0495660_0006076 Ga0495660_0006076_3051_4424 429
36 3300050508 nmdc:mga09592_81676_c1 nmdc:mga09592_81676_c1_1129_2430 429
37 3300053134 Ga0500658_0013196 Ga0500658_0013196_784_2157 429
38 3300005355 Ga0070671_100015996 Ga0070671_1000159963 430
39 3300005548 Ga0070665_100202919 Ga0070665_1002029191 430
40 3300005618 Ga0068864_100057849 Ga0068864_1000578493 430
41 3300005841 Ga0068863_100009872 Ga0068863_1000098722 430
42 3300009148 Ga0105243_10001009 Ga0105243_100010094 430
43 3300014745 Ga0157377_10000226 Ga0157377_1000022616 430
44 3300014968 Ga0157379_10105026 Ga0157379_101050262 430
45 3300026088 Ga0207641_10026949 Ga0207641_100269492 430
46 3300028379 Ga0268266_10029921 Ga0268266_100299213 430
47 3300044658 Ga0466972_0075573 Ga0466972_0075573_239_1564 430
48 3300046616 Ga0495668_0023596 Ga0495668_0023596_823_2166 430
49 3300042134 Ga0450898_001022 Ga0450898_001022_564_1892 431
50 3300042435 Ga0439434_0012706 Ga0439434_0012706_718_2046 431
51 3300010375 Ga0105239_10041344 Ga0105239_100413444 432
52 3300026041 Ga0207639_10183530 Ga0207639_101835302 432
53 3300031901 Ga0307406_10014488 Ga0307406_100144882 432
54 3300050493 nmdc:mga0k408_1811_c1 nmdc:mga0k408_1811_c1_1985_3322 432
55 3300050494 nmdc:mga06z11_86879_c1 nmdc:mga06z11_86879_c1_171_1604 432
56 3300005333 Ga0070677_10023190 Ga0070677_100231902 433
57 3300046684 Ga0495669_0035755 Ga0495669_0035755_349_1731 433
58 3300049579 Ga0501043_0000517 Ga0501043_0000517_11101_12432 433
59 3300049580 Ga0501046_0000363 Ga0501046_0000363_33309_34640 433
60 3300049581 Ga0501047_0000137 Ga0501047_0000137_65335_66666 433
61 3300049582 Ga0501048_0001592 Ga0501048_0001592_7371_8702 433
62 3300049824 Ga0501045_0001841 Ga0501045_0001841_2149_3480 433
63 3300005456 Ga0070678_100073439 Ga0070678_1000734392 434
64 3300005564 Ga0070664_100258514 Ga0070664_1002585142 434
65 3300026067 Ga0207678_10218755 Ga0207678_102187552 434
66 3300026121 Ga0207683_10098778 Ga0207683_100987782 434
67 3300031548 Ga0307408_100000298 Ga0307408_10000029830 434
68 3300031901 Ga0307406_10000234 Ga0307406_1000023422 434
69 3300005455 Ga0070663_100112261 Ga0070663_1001122612 435
70 3300005578 Ga0068854_100052544 Ga0068854_1000525442 435
71 3300005841 Ga0068863_100107372 Ga0068863_1001073722 435
72 3300025981 Ga0207640_10038999 Ga0207640_100389991 435
73 3300026067 Ga0207678_10091010 Ga0207678_100910102 435
74 3300026075 Ga0207708_10212470 Ga0207708_102124702 435
75 3300026089 Ga0207648_10093259 Ga0207648_100932592 435
76 3300026118 Ga0207675_100096150 Ga0207675_1000961502 435
77 3300028794 Ga0307515_10002729 Ga0307515_1000272925 435
78 3300031456 Ga0307513_10195757 Ga0307513_101957572 435
79 iso_pu_bacteria 2643221654 2644304036 435
80 3300028786 Ga0307517_10039969 Ga0307517_100399693 436
81 3300031507 Ga0307509_10016006 Ga0307509_100160062 436
82 3300031507 Ga0307509_10056863 Ga0307509_100568633 436
83 3300033179 Ga0307507_10139233 Ga0307507_101392332 436
84 3300035691 Ga0373931_0003096 Ga0373931_0003096_1112_2443 436
85 3300047321 Ga0495676_0071681 Ga0495676_0071681_581_1912 436
86 3300048905 Ga0496102_0006123 Ga0496102_0006123_5057_6487 436
87 3300050493 nmdc:mga0k408_23140_c1 nmdc:mga0k408_23140_c1_1556_2887 436
88 3300005353 Ga0070669_100095703 Ga0070669_1000957032 437
89 3300005455 Ga0070663_100014047 Ga0070663_1000140473 437
90 3300005539 Ga0068853_100020499 Ga0068853_1000204993 437
91 3300005543 Ga0070672_100040739 Ga0070672_1000407392 437
92 3300005616 Ga0068852_100004642 Ga0068852_1000046426 437
93 3300009553 Ga0105249_10051377 Ga0105249_100513772 437
94 3300017792 Ga0163161_10018495 Ga0163161_100184952 437
95 3300025934 Ga0207686_10090765 Ga0207686_100907652 437
96 3300025937 Ga0207669_10128436 Ga0207669_101284362 437
97 3300026067 Ga0207678_10004330 Ga0207678_100043309 437
98 3300026118 Ga0207675_100055599 Ga0207675_1000555992 437
99 3300026142 Ga0207698_10004626 Ga0207698_100046263 437
100 3300028794 Ga0307515_10009364 Ga0307515_100093649 437
101 3300030522 Ga0307512_10037634 Ga0307512_100376343 437
102 3300031456 Ga0307513_10082101 Ga0307513_100821012 437
103 3300005327 Ga0070658_10145317 Ga0070658_101453172 438
104 3300005328 Ga0070676_10022434 Ga0070676_100224342 438
105 3300005331 Ga0070670_100002413 Ga0070670_1000024138 438
106 3300005364 Ga0070673_100150462 Ga0070673_1001504622 438
107 3300005367 Ga0070667_100132846 Ga0070667_1001328462 438
108 3300005459 Ga0068867_100000090 Ga0068867_10000009052 438
109 3300005618 Ga0068864_100011154 Ga0068864_1000111543 438
110 3300005841 Ga0068863_100057392 Ga0068863_1000573922 438
111 3300006237 Ga0097621_100030712 Ga0097621_1000307122 438
112 3300006358 Ga0068871_100062965 Ga0068871_1000629652 438
113 3300013308 Ga0157375_10039451 Ga0157375_100394514 438
114 3300014326 Ga0157380_10004073 Ga0157380_100040735 438
115 3300025909 Ga0207705_10081991 Ga0207705_100819912 438
116 3300025925 Ga0207650_10032966 Ga0207650_100329662 438
117 3300025926 Ga0207659_10107304 Ga0207659_101073042 438
118 3300025935 Ga0207709_10006428 Ga0207709_100064284 438
119 3300025940 Ga0207691_10006000 Ga0207691_100060004 438
120 3300025960 Ga0207651_10032324 Ga0207651_100323242 438
121 3300025986 Ga0207658_10032317 Ga0207658_100323172 438
122 3300026088 Ga0207641_10064633 Ga0207641_100646331 438
123 3300026089 Ga0207648_10001570 Ga0207648_100015703 438
124 3300026095 Ga0207676_10011440 Ga0207676_100114404 438
125 3300031507 Ga0307509_10000181 Ga0307509_1000018125 438
126 3300031507 Ga0307509_10030940 Ga0307509_100309402 438
127 3300031616 Ga0307508_10005132 Ga0307508_100051329 438
128 3300031616 Ga0307508_10119070 Ga0307508_101190702 438
129 3300032002 Ga0307416_100115548 Ga0307416_1001155481 438
130 3300033180 Ga0307510_10088679 Ga0307510_100886792 438
131 3300037471 Ga0395905_0005191 Ga0395905_0005191_4181_5524 438
132 3300044712 Ga0453684_0017627 Ga0453684_0017627_2450_3787 438
133 3300046454 Ga0495592_0000461 Ga0495592_0000461_452_1789 438
134 3300053133 Ga0500655_004175 Ga0500655_004175_206_1543 438
135 3300053136 Ga0500559_0000061 Ga0500559_0000061_70192_71529 438
136 3300053156 Ga0500622_0008078 Ga0500622_0008078_2111_3448 438
137 3300005331 Ga0070670_100032024 Ga0070670_1000320243 439
138 3300005364 Ga0070673_100128798 Ga0070673_1001287982 439
139 3300005456 Ga0070678_100052239 Ga0070678_1000522392 439
140 3300025925 Ga0207650_10038254 Ga0207650_100382543 439
141 3300025931 Ga0207644_10115988 Ga0207644_101159882 439
142 3300006195 Ga0075366_10001030 Ga0075366_100010308 440
143 3300006353 Ga0075370_10000532 Ga0075370_100005329 440
144 3300025960 Ga0207651_10148639 Ga0207651_101486392 440
145 3300044683 Ga0466965_0008345 Ga0466965_0008345_1031_2386 440
146 3300048909 Ga0496106_0094713 Ga0496106_0094713_562_1926 440
147 3300048924 Ga0496121_0097516 Ga0496121_0097516_94_1458 440
148 3300050493 nmdc:mga0k408_699_c1 nmdc:mga0k408_699_c1_3150_4520 440
149 3300050496 nmdc:mga07m45_42_c1 nmdc:mga07m45_42_c1_48928_50298 440
150 3300053086 Ga0500578_0039590 Ga0500578_0039590_1578_2942 440
151 3300053730 Ga0500645_001316 Ga0500645_001316_1591_2955 440
152 3300005333 Ga0070677_10002766 Ga0070677_100027662 441
153 3300005347 Ga0070668_100085886 Ga0070668_1000858862 441
154 3300005353 Ga0070669_100106732 Ga0070669_1001067322 441
155 3300005354 Ga0070675_100001241 Ga0070675_1000012418 441
156 3300005354 Ga0070675_100017376 Ga0070675_1000173762 441
157 3300005356 Ga0070674_100006715 Ga0070674_1000067155 441
158 3300005364 Ga0070673_100114709 Ga0070673_1001147092 441
159 3300005367 Ga0070667_100004547 Ga0070667_1000045474 441
160 3300005456 Ga0070678_100000793 Ga0070678_1000007936 441
161 3300005459 Ga0068867_100000998 Ga0068867_10000099810 441
162 3300005543 Ga0070672_100000138 Ga0070672_10000013814 441
163 3300005543 Ga0070672_100031849 Ga0070672_1000318492 441
164 3300005564 Ga0070664_100063765 Ga0070664_1000637652 441
165 3300005564 Ga0070664_100073719 Ga0070664_1000737192 441
166 3300005616 Ga0068852_100040191 Ga0068852_1000401912 441
167 3300005616 Ga0068852_100045317 Ga0068852_1000453171 441
168 3300005834 Ga0068851_10029044 Ga0068851_100290442 441
169 3300006237 Ga0097621_100147931 Ga0097621_1001479312 441
170 3300006881 Ga0068865_100168875 Ga0068865_1001688752 441
171 3300013308 Ga0157375_10002405 Ga0157375_1000240511 441
172 3300014969 Ga0157376_10026123 Ga0157376_100261232 441
173 3300014969 Ga0157376_10178743 Ga0157376_101787431 441
174 3300025315 Ga0207697_10009325 Ga0207697_100093252 441
175 3300025315 Ga0207697_10024853 Ga0207697_100248532 441
176 3300025893 Ga0207682_10001707 Ga0207682_100017076 441
177 3300025907 Ga0207645_10099407 Ga0207645_100994071 441
178 3300025925 Ga0207650_10000856 Ga0207650_100008564 441
179 3300025925 Ga0207650_10018868 Ga0207650_100188684 441
180 3300025926 Ga0207659_10000472 Ga0207659_1000047214 441
181 3300025931 Ga0207644_10003314 Ga0207644_100033142 441
182 3300025937 Ga0207669_10001431 Ga0207669_100014312 441
183 3300025937 Ga0207669_10071007 Ga0207669_100710072 441
184 3300025940 Ga0207691_10108444 Ga0207691_101084442 441
185 3300025944 Ga0207661_10026235 Ga0207661_100262353 441
186 3300025945 Ga0207679_10028374 Ga0207679_100283742 441
187 3300025960 Ga0207651_10001018 Ga0207651_100010187 441
188 3300025960 Ga0207651_10122844 Ga0207651_101228442 441
189 3300025986 Ga0207658_10003409 Ga0207658_100034096 441
190 3300026023 Ga0207677_10032980 Ga0207677_100329802 441
191 3300026088 Ga0207641_10073462 Ga0207641_100734622 441
192 3300026089 Ga0207648_10002213 Ga0207648_1000221311 441
193 3300026121 Ga0207683_10008523 Ga0207683_100085234 441
194 3300026121 Ga0207683_10193708 Ga0207683_101937082 441
195 3300026142 Ga0207698_10002092 Ga0207698_100020926 441
196 3300046537 Ga0495598_0004318 Ga0495598_0004318_869_2212 441
197 3300005614 Ga0068856_100089659 Ga0068856_1000896592 442
198 3300026078 Ga0207702_10132677 Ga0207702_101326772 442
199 iso_pu_bacteria 2585428062 2587755363 442
200 3300005331 Ga0070670_100021667 Ga0070670_1000216672 443
201 3300005355 Ga0070671_100002882 Ga0070671_1000028824 443
202 3300005459 Ga0068867_100023427 Ga0068867_1000234274 443
203 3300005618 Ga0068864_100037311 Ga0068864_1000373113 443
204 3300006237 Ga0097621_100028442 Ga0097621_1000284424 443
205 3300006358 Ga0068871_100014195 Ga0068871_1000141954 443
206 3300025907 Ga0207645_10009380 Ga0207645_100093804 443
207 3300026089 Ga0207648_10013856 Ga0207648_100138565 443
208 3300049649 Ga0501198_000001 Ga0501198_000001_210977_212320 443
209 3300049662 Ga0501222_000013 Ga0501222_000013_63941_65284 443
210 3300049823 Ga0501044_0077350 Ga0501044_0077350_341_1702 443
211 3300053154 Ga0500619_000004 Ga0500619_000004_51085_52500 444
212 3300044719 Ga0466971_0041736 Ga0466971_0041736_354_1736 445
213 3300048905 Ga0496102_0017368 Ga0496102_0017368_504_1943 445
214 3300053117 Ga0500593_000152 Ga0500593_000152_17615_19093 445
215 3300005616 Ga0068852_100014071 Ga0068852_1000140712 446
216 3300006042 Ga0075368_10058159 Ga0075368_100581592 446
217 3300006051 Ga0075364_10073955 Ga0075364_100739552 446
218 3300006177 Ga0075362_10002008 Ga0075362_100020083 446
219 3300006195 Ga0075366_10058968 Ga0075366_100589682 446
220 3300006353 Ga0075370_10000233 Ga0075370_1000023313 446
221 3300006353 Ga0075370_10092184 Ga0075370_100921842 446
222 3300026089 Ga0207648_10166507 Ga0207648_101665072 446
223 3300028794 Ga0307515_10000268 Ga0307515_1000026889 446
224 3300028794 Ga0307515_10002746 Ga0307515_100027467 446
225 3300031507 Ga0307509_10089016 Ga0307509_100890162 446
226 3300031616 Ga0307508_10000007 Ga0307508_10000007237 446
227 3300031616 Ga0307508_10003540 Ga0307508_100035409 446
228 3300031649 Ga0307514_10041717 Ga0307514_100417172 446
229 3300031730 Ga0307516_10060323 Ga0307516_100603234 446
230 3300041460 Ga0451802_0496628 Ga0451802_0496628_514_1938 446
231 3300041498 Ga0451841_1394724 Ga0451841_1394724_687_2111 446
232 3300044656 Ga0466969_0018331 Ga0466969_0018331_1442_2818 446
233 3300044683 Ga0466965_0022224 Ga0466965_0022224_821_2197 446
234 3300044693 Ga0466961_0072434 Ga0466961_0072434_731_2107 446
235 3300046519 Ga0495632_0028813 Ga0495632_0028813_411_1835 446
236 3300046522 Ga0495643_0037854 Ga0495643_0037854_404_1777 446
237 3300046542 Ga0495597_0004588 Ga0495597_0004588_4316_5689 446
238 3300046660 Ga0495625_0001627 Ga0495625_0001627_15362_16786 446
239 3300047443 Ga0495687_000272 Ga0495687_000272_58475_59848 446
240 3300050493 nmdc:mga0k408_18950_c1 nmdc:mga0k408_18950_c1_302_1675 446
241 3300050493 nmdc:mga0k408_41641_c1 nmdc:mga0k408_41641_c1_1036_2409 446
242 3300050496 nmdc:mga07m45_49005_c1 nmdc:mga07m45_49005_c1_954_2327 446
243 3300050496 nmdc:mga07m45_5053_c1 nmdc:mga07m45_5053_c1_281_1648 446
244 3300050516 nmdc:mga0sz30_41834_c1 nmdc:mga0sz30_41834_c1_135_1508 446
245 3300053739 Ga0500587_000075 Ga0500587_000075_1112_2536 446
246 3300061719 Ga0466962_0014502 Ga0466962_0014502_2080_3456 446
247 3300005338 Ga0068868_100004844 Ga0068868_1000048442 447
248 3300005543 Ga0070672_100035935 Ga0070672_1000359352 447
249 3300006195 Ga0075366_10000636 Ga0075366_100006369 447
250 3300006353 Ga0075370_10011406 Ga0075370_100114062 447
251 3300025907 Ga0207645_10000749 Ga0207645_100007498 447
252 3300025940 Ga0207691_10006244 Ga0207691_1000624410 447
253 3300026023 Ga0207677_10055566 Ga0207677_100555662 447
254 3300026089 Ga0207648_10002437 Ga0207648_100024376 447
255 3300032004 Ga0307414_10097703 Ga0307414_100977032 447
256 3300050493 nmdc:mga0k408_193_c1 nmdc:mga0k408_193_c1_9469_10845 447
257 3300050496 nmdc:mga07m45_9453_c1 nmdc:mga07m45_9453_c1_898_2289 447
258 3300026116 Ga0207674_10071657 Ga0207674_100716574 448
259 iso_pu_bacteria 2643221660 2644337378 448
260 3300005457 Ga0070662_100004277 Ga0070662_1000042774 449
261 3300005467 Ga0070706_100001419 Ga0070706_1000014194 449
262 3300025922 Ga0207646_10073889 Ga0207646_100738892 449
263 3300025933 Ga0207706_10002414 Ga0207706_100024148 449
264 3300026142 Ga0207698_10099645 Ga0207698_100996452 449
265 3300044656 Ga0466969_0000024 Ga0466969_0000024_9388_10806 449
266 3300044658 Ga0466972_0002385 Ga0466972_0002385_5032_6402 449
267 3300044693 Ga0466961_0014387 Ga0466961_0014387_1558_2976 449
268 3300044765 Ga0466970_0053876 Ga0466970_0053876_406_1824 449
269 3300045049 Ga0466959_0032548 Ga0466959_0032548_1156_2574 449
270 3300050493 nmdc:mga0k408_31763_c1 nmdc:mga0k408_31763_c1_323_1750 449
271 3300003347 JGI26128J50194_1000177 JGI26128J50194_10001772 453
272 3300027526 Ga0209968_1003203 Ga0209968_10032031 453
273 3300027695 Ga0209966_1000006 Ga0209966_100000684 453
274 3300031548 Ga0307408_100031672 Ga0307408_1000316723 453

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22366

NDH2_C

NDH2 C-terminal domain

389

449

0.92

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

182

274

0.91

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

21

365

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nwz-assembly4.cif.gz_D-3 structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.8938 14 422
4nwz-assembly4.cif.gz_D-3 structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.8893 14 422
4nwz-assembly1.cif.gz_A structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.886 13 420
5kmr-assembly2.cif.gz_C the structure of type ii nadh dehydrogenase from caldalkalibacillus thermarum complexed with nad+ at 3.0 angstrom resolution. 0.8826 13 422
4nwz-assembly1.cif.gz_A structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.8818 13 420
ID Description Score Start End Superfamily
1lvlA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.895 168 274 3.50.50.60
af_P95200_9_428_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.892 8 429 3.50.50.100
1ebdB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8864 169 272 3.50.50.60
af_A0A0R0H3V8_1_250_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8825 117 322 3.50.50.60
af_P95200_9_428_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.8819 8 429 3.50.50.100
ID Description Score Start End GO Terms
AF-A0A3D4H227-F1-model_v4 NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9) 0.9514 169 272 GO:0003954
GO:0006116
AF-A0A2S8LPK2-F1-model_v4 deleted 0.9489 107 259
AF-A0A5C2EZD7-F1-model_v4 deleted 0.9231 115 311
AF-A0A150Q443-F1-model_v4 NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9) 0.9195 7 431 GO:0003954
GO:0006116
GO:0016020
AF-A0A1E1EY24-F1-model_v4 NADH dehydrogenase 0.9165 13 393 GO:0003955
GO:0019646

Feature Viewer

pLDDT pTM Quality
80.55 0.78 High
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Predicted Structure (AlphaFold2)

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