F379908
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 274 | 135 | 546 | 508 |
Family's Representative Sequence
| Representative Sequence | 3300042128|Ga0450897_000539|Ga0450897_000539_105_1745 |
| Length | 534 |
| Sequence | LYANIHIAGTGRLLYTARKDRAMNDKDIRKIVIVGGGTAGWMTAAPLAQRLAGHPTRGCEVTLIESPEIGTIGVGEATLPTIRYYNAALGLDGADFIRKTQASFKLGIEFKDWGHLGNRFFHGFGDFGPSLGSIPSHMYWLRMAREFDKMPPLENWSMSSVMARELKFTPPGEAPGPLSGSYSYGFHFDAGLYASYLRDYAVKHGAKRIEGMIVEVEQHPETGFITAVKLRDGRRIEGDLFVDCSGFRGLLIEGALKAGYDDWSDQLPCNSALAVPCAKQARITPYTRSTAKEAGWIWRIPLQHRTGNGHVYSSAFTSDERAREVLLGELDGEALDEPRQLRFVTGRRRKSWVKNCVAVGLSAGFVEPLESTSIHLIENAVGKLLELFPDRDFRPELADEFNRAMAVRYESIRDFIVMHYKLTRRDDSELWRYCANMPITDTLRHQIEVFRETGRVVILDPDGFAQPSFVAMMMGLGVVPKRYDPLADHVDIRVVHGHFAGLRDMVAKEVARMPDHAAYLAAQALAPQPSYKAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300042128 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 | Metagenome | Rhizosphere |
| 2 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 3 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 4 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 5 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 6 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 7 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 8 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 13 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 14 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 15 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 16 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 21 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 22 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 23 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 24 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 25 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 26 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 34 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 35 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 36 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 37 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 38 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 39 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 40 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 41 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 42 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 43 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 44 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 45 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 46 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 47 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 48 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 49 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 50 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 51 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 52 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 53 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 54 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 55 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300048090 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 107 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 108 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 109 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 110 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 111 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 112 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 113 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 114 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 115 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300049766 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought | Metagenome | Rhizosphere |
| 119 | 3300049775 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought | Metagenome | Rhizosphere |
| 120 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300053145 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere | Metagenome | Endosphere |
| 122 | 2643221556 | Massilia sp. Root1485 | Isolate | Unclassified |
| 123 | 2643221646 | Pelomonas sp. Root1237 | Isolate | Unclassified |
| 124 | 2643221684 | Massilia sp. Root133 | Isolate | Unclassified |
| 125 | 2738541297 | Duganella sp. GV083 | Isolate | Unclassified |
| 126 | 2738541357 | Duganella sp. GV053 | Isolate | Unclassified |
| 127 | 2738543003 | Duganella sp. GV066 | Isolate | Unclassified |
| 128 | 2738543026 | Duganella sp. GV089 | Isolate | Unclassified |
| 129 | 2738543029 | Duganella sp. GV039 | Isolate | Unclassified |
| 130 | 2808606418 | Herbaspirillum sp. SJZ107 | Isolate | Rhizosphere |
| 131 | 2821131069 | Duganella sp. 1224 | Isolate | Unclassified |
| 132 | 2842711865 | Duganella sp. R-73148 | Isolate | Unclassified |
| 133 | 2857558681 | Duganella sp. R-74565 | Isolate | Unclassified |
| 134 | 2904424332 | Duganella sp. 1411 | Isolate | Rhizosphere |
| 135 | 8047673197 | Telluria mixta LMG 11547 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.53 |
| Metatranscriptomes | 0 |
| Isolates | 5.47 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.74 |
| Nodule | 0 |
| Rhizoplane | 1.82 |
| Rhizosphere | 85.04 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0450897_000539 | 3300042128 | Bacteria | 2140 |
| 2 | JGI25154J39366_1000353 | 3300002738 | Bacteria | 26138 |
| 3 | rootL2_10041292 | 3300003322 | Bacteria | 6111 |
| 4 | Ga0055525_1000029 | 3300003759 | Bacteria | 320663 |
| 5 | Ga0055529_1000051 | 3300003763 | Bacteria | 205006 |
| 6 | Ga0055529_1000263 | 3300003763 | Bacteria | 62492 |
| 7 | Ga0055526_1000057 | 3300003771 | Bacteria | 109551 |
| 8 | Ga0065165_1024245 | 3300005262 | Bacteria | 2041 |
| 9 | Ga0070660_100005311 | 3300005339 | Bacteria | 8914 |
| 10 | Ga0070660_100005596 | 3300005339 | Bacteria | 8712 |
| 11 | Ga0070660_100013647 | 3300005339 | Bacteria | 5837 |
| 12 | Ga0070661_100022293 | 3300005344 | Bacteria | 4533 |
| 13 | Ga0070661_100058551 | 3300005344 | Bacteria | 2823 |
| 14 | Ga0070659_100004065 | 3300005366 | Bacteria | 10434 |
| 15 | Ga0070659_100016428 | 3300005366 | Bacteria | 5558 |
| 16 | Ga0070659_100046937 | 3300005366 | Bacteria | 3386 |
| 17 | Ga0070663_100011127 | 3300005455 | Bacteria | 5634 |
| 18 | Ga0068855_100042617 | 3300005563 | Bacteria | 5377 |
| 19 | Ga0068855_100110724 | 3300005563 | Bacteria | 3152 |
| 20 | Ga0068854_100029516 | 3300005578 | Bacteria | 3797 |
| 21 | Ga0068852_100014551 | 3300005616 | Bacteria | 6063 |
| 22 | Ga0068852_100129930 | 3300005616 | Bacteria | 2318 |
| 23 | Ga0075363_100045992 | 3300006048 | Bacteria | 2315 |
| 24 | Ga0105244_10006471 | 3300009036 | Bacteria | 7576 |
| 25 | Ga0105243_10048647 | 3300009148 | Bacteria | 3343 |
| 26 | Ga0105242_10034619 | 3300009176 | Bacteria | 4049 |
| 27 | Ga0157373_10114983 | 3300013100 | Bacteria | 1892 |
| 28 | Ga0209563_100003 | 3300025230 | Bacteria | 1932942 |
| 29 | Ga0209646_1000007 | 3300025246 | Bacteria | 670994 |
| 30 | Ga0209677_102465 | 3300025253 | Bacteria | 6935 |
| 31 | Ga0209148_1001467 | 3300025254 | Bacteria | 11903 |
| 32 | Ga0209455_1000044 | 3300025272 | Bacteria | 410787 |
| 33 | Ga0209455_1000051 | 3300025272 | Bacteria | 369818 |
| 34 | Ga0209564_1000011 | 3300025295 | Bacteria | 822327 |
| 35 | Ga0207654_10068990 | 3300025911 | Bacteria | 2093 |
| 36 | Ga0207657_10003410 | 3300025919 | Bacteria | 16962 |
| 37 | Ga0207657_10004561 | 3300025919 | Bacteria | 14647 |
| 38 | Ga0207690_10001566 | 3300025932 | Bacteria | 14325 |
| 39 | Ga0207690_10038474 | 3300025932 | Bacteria | 3114 |
| 40 | Ga0207706_10117933 | 3300025933 | Bacteria | 2334 |
| 41 | Ga0207686_10007842 | 3300025934 | Bacteria | 5755 |
| 42 | Ga0207678_10009567 | 3300026067 | Bacteria | 8525 |
| 43 | Ga0207698_10009916 | 3300026142 | Bacteria | 6093 |
| 44 | Ga0307515_10069168 | 3300028794 | Bacteria | 4833 |
| 45 | Ga0307516_10002633 | 3300031730 | Bacteria | 23767 |
| 46 | Ga0373939_0005111 | 3300035114 | Bacteria | 3120 |
| 47 | Ga0395899_0000127 | 3300037312 | Bacteria | 119435 |
| 48 | Ga0395899_0009960 | 3300037312 | Bacteria | 7289 |
| 49 | Ga0395899_0062227 | 3300037312 | Bacteria | 2748 |
| 50 | Ga0395899_0073596 | 3300037312 | Bacteria | 2497 |
| 51 | Ga0395900_0000123 | 3300037418 | Bacteria | 133326 |
| 52 | Ga0395900_0018262 | 3300037418 | Bacteria | 7153 |
| 53 | Ga0395900_0027649 | 3300037418 | Bacteria | 5810 |
| 54 | Ga0395900_0052909 | 3300037418 | Bacteria | 4179 |
| 55 | Ga0395898_0091457 | 3300037466 | Bacteria | 2927 |
| 56 | Ga0395898_0122897 | 3300037466 | Bacteria | 2487 |
| 57 | Ga0395898_0143204 | 3300037466 | Bacteria | 2288 |
| 58 | Ga0395905_0000102 | 3300037471 | Bacteria | 143700 |
| 59 | Ga0395905_0003401 | 3300037471 | Bacteria | 17036 |
| 60 | Ga0395905_0075119 | 3300037471 | Bacteria | 3167 |
| 61 | Ga0395905_0093301 | 3300037471 | Bacteria | 2823 |
| 62 | Ga0395905_0145206 | 3300037471 | Bacteria | 2232 |
| 63 | Ga0395905_0210560 | 3300037471 | Bacteria | 1821 |
| 64 | Ga0395901_0000411 | 3300038443 | Bacteria | 50643 |
| 65 | Ga0395901_0001908 | 3300038443 | Bacteria | 21493 |
| 66 | Ga0395901_0006115 | 3300038443 | Bacteria | 12198 |
| 67 | Ga0395901_0085038 | 3300038443 | Bacteria | 3306 |
| 68 | Ga0439448_0000310 | 3300042005 | Bacteria | 10761 |
| 69 | Ga0466969_0034396 | 3300044656 | Bacteria | 2567 |
| 70 | Ga0466966_0046119 | 3300044684 | Bacteria | 2784 |
| 71 | Ga0466963_0139157 | 3300044694 | Bacteria | 1681 |
| 72 | Ga0466964_0000019 | 3300044706 | Bacteria | 35345 |
| 73 | Ga0466964_0000371 | 3300044706 | Bacteria | 13589 |
| 74 | Ga0466964_0061181 | 3300044706 | Bacteria | 1567 |
| 75 | Ga0466971_0054452 | 3300044719 | Bacteria | 1803 |
| 76 | Ga0466968_0000184 | 3300044735 | Bacteria | 19138 |
| 77 | Ga0466957_0000079 | 3300044842 | Bacteria | 38733 |
| 78 | Ga0466957_0011488 | 3300044842 | Bacteria | 5111 |
| 79 | Ga0466957_0097153 | 3300044842 | Bacteria | 1852 |
| 80 | Ga0466960_0018790 | 3300044901 | Bacteria | 3034 |
| 81 | Ga0466959_0017726 | 3300045049 | Bacteria | 5223 |
| 82 | Ga0466959_0063138 | 3300045049 | Bacteria | 2690 |
| 83 | Ga0466958_0037334 | 3300045836 | Bacteria | 2911 |
| 84 | Ga0466958_0046765 | 3300045836 | Bacteria | 2612 |
| 85 | Ga0466967_0004874 | 3300045976 | Bacteria | 9164 |
| 86 | Ga0466967_0009357 | 3300045976 | Bacteria | 7265 |
| 87 | Ga0495617_000004 | 3300046452 | Bacteria | 511274 |
| 88 | Ga0495627_003563 | 3300046453 | Bacteria | 6795 |
| 89 | Ga0495590_0000006 | 3300046457 | Bacteria | 372949 |
| 90 | Ga0495590_0025604 | 3300046457 | Bacteria | 2074 |
| 91 | Ga0495638_0000891 | 3300046460 | Bacteria | 30617 |
| 92 | Ga0495653_0016684 | 3300046463 | Bacteria | 5977 |
| 93 | Ga0495650_0000086 | 3300046471 | Bacteria | 235224 |
| 94 | Ga0495650_0000146 | 3300046471 | Bacteria | 163598 |
| 95 | Ga0495650_0000184 | 3300046471 | Bacteria | 136939 |
| 96 | Ga0495650_0001355 | 3300046471 | Bacteria | 24323 |
| 97 | Ga0495650_0001969 | 3300046471 | Bacteria | 18130 |
| 98 | Ga0495650_0002825 | 3300046471 | Bacteria | 13315 |
| 99 | Ga0495650_0020565 | 3300046471 | Bacteria | 3214 |
| 100 | Ga0495605_0000022 | 3300046474 | Bacteria | 248321 |
| 101 | Ga0495605_0000029 | 3300046474 | Bacteria | 215329 |
| 102 | Ga0495605_0008936 | 3300046474 | Bacteria | 5649 |
| 103 | Ga0495605_0010809 | 3300046474 | Bacteria | 5099 |
| 104 | Ga0495605_0018973 | 3300046474 | Bacteria | 3681 |
| 105 | Ga0495605_0024338 | 3300046474 | Bacteria | 3169 |
| 106 | Ga0495639_0011348 | 3300046475 | Bacteria | 3841 |
| 107 | Ga0495584_0003043 | 3300046491 | Bacteria | 9305 |
| 108 | Ga0495584_0008241 | 3300046491 | Bacteria | 5402 |
| 109 | Ga0495584_0034024 | 3300046491 | Bacteria | 2578 |
| 110 | Ga0495585_0021274 | 3300046492 | Bacteria | 3725 |
| 111 | Ga0495585_0048464 | 3300046492 | Bacteria | 2362 |
| 112 | Ga0495594_0010710 | 3300046499 | Bacteria | 4757 |
| 113 | Ga0495596_0000065 | 3300046500 | Bacteria | 77306 |
| 114 | Ga0495596_0006185 | 3300046500 | Bacteria | 5544 |
| 115 | Ga0495607_0002609 | 3300046501 | Bacteria | 14481 |
| 116 | Ga0495607_0008406 | 3300046501 | Bacteria | 7057 |
| 117 | Ga0495607_0019957 | 3300046501 | Bacteria | 4245 |
| 118 | Ga0495607_0026178 | 3300046501 | Bacteria | 3621 |
| 119 | Ga0495583_0000491 | 3300046506 | Bacteria | 57580 |
| 120 | Ga0495583_0001117 | 3300046506 | Bacteria | 29592 |
| 121 | Ga0495583_0001566 | 3300046506 | Bacteria | 22601 |
| 122 | Ga0495583_0014841 | 3300046506 | Bacteria | 4268 |
| 123 | Ga0495606_0000062 | 3300046507 | Bacteria | 184841 |
| 124 | Ga0495606_0000106 | 3300046507 | Bacteria | 142138 |
| 125 | Ga0495606_0002887 | 3300046507 | Bacteria | 18992 |
| 126 | Ga0495606_0003349 | 3300046507 | Bacteria | 17085 |
| 127 | Ga0495606_0019101 | 3300046507 | Bacteria | 5112 |
| 128 | Ga0495610_0000010 | 3300046512 | Bacteria | 538821 |
| 129 | Ga0495610_0002591 | 3300046512 | Bacteria | 14998 |
| 130 | Ga0495610_0014169 | 3300046512 | Bacteria | 4699 |
| 131 | Ga0495616_0001479 | 3300046513 | Bacteria | 16296 |
| 132 | Ga0495631_0003678 | 3300046518 | Bacteria | 8365 |
| 133 | Ga0495631_0025996 | 3300046518 | Bacteria | 2692 |
| 134 | Ga0495631_0025999 | 3300046518 | Bacteria | 2691 |
| 135 | Ga0495631_0045158 | 3300046518 | Bacteria | 1940 |
| 136 | Ga0495632_0000082 | 3300046519 | Bacteria | 97726 |
| 137 | Ga0495632_0001594 | 3300046519 | Bacteria | 18701 |
| 138 | Ga0495632_0003451 | 3300046519 | Bacteria | 11213 |
| 139 | Ga0495632_0008106 | 3300046519 | Bacteria | 6502 |
| 140 | Ga0495637_0000056 | 3300046520 | Bacteria | 98978 |
| 141 | Ga0495643_0000633 | 3300046522 | Bacteria | 41677 |
| 142 | Ga0495643_0008961 | 3300046522 | Bacteria | 6286 |
| 143 | Ga0495644_0005662 | 3300046523 | Bacteria | 4874 |
| 144 | Ga0495644_0012424 | 3300046523 | Bacteria | 3275 |
| 145 | Ga0495644_0015617 | 3300046523 | Bacteria | 2910 |
| 146 | Ga0495648_0000061 | 3300046524 | Bacteria | 151604 |
| 147 | Ga0495648_0001197 | 3300046524 | Bacteria | 25984 |
| 148 | Ga0495648_0002962 | 3300046524 | Bacteria | 15237 |
| 149 | Ga0495648_0011354 | 3300046524 | Bacteria | 6713 |
| 150 | Ga0495663_0001014 | 3300046525 | Bacteria | 9294 |
| 151 | Ga0495642_0001645 | 3300046528 | Bacteria | 9712 |
| 152 | Ga0495642_0002778 | 3300046528 | Bacteria | 7014 |
| 153 | Ga0495642_0016660 | 3300046528 | Bacteria | 2867 |
| 154 | Ga0495654_0000002 | 3300046530 | Bacteria | 1021205 |
| 155 | Ga0495654_0002925 | 3300046530 | Bacteria | 10705 |
| 156 | Ga0495587_0041534 | 3300046536 | Bacteria | 2744 |
| 157 | Ga0495609_0000022 | 3300046538 | Bacteria | 279488 |
| 158 | Ga0495609_0001658 | 3300046538 | Bacteria | 14513 |
| 159 | Ga0495609_0011668 | 3300046538 | Bacteria | 4182 |
| 160 | Ga0495609_0017704 | 3300046538 | Bacteria | 3306 |
| 161 | Ga0495597_0000494 | 3300046542 | Bacteria | 32903 |
| 162 | Ga0495597_0000679 | 3300046542 | Bacteria | 27607 |
| 163 | Ga0495597_0003141 | 3300046542 | Bacteria | 9893 |
| 164 | Ga0495597_0004747 | 3300046542 | Bacteria | 7358 |
| 165 | Ga0495597_0011374 | 3300046542 | Bacteria | 4315 |
| 166 | Ga0495622_0000103 | 3300046557 | Bacteria | 74095 |
| 167 | Ga0495633_0002098 | 3300046558 | Bacteria | 14322 |
| 168 | Ga0495633_0006435 | 3300046558 | Bacteria | 6962 |
| 169 | Ga0495633_0064091 | 3300046558 | Bacteria | 1718 |
| 170 | Ga0495656_0004490 | 3300046615 | Bacteria | 4781 |
| 171 | Ga0495668_0000170 | 3300046616 | Bacteria | 97074 |
| 172 | Ga0495668_0001564 | 3300046616 | Bacteria | 21690 |
| 173 | Ga0495668_0002803 | 3300046616 | Bacteria | 13875 |
| 174 | Ga0495668_0006810 | 3300046616 | Bacteria | 7419 |
| 175 | Ga0495668_0008267 | 3300046616 | Bacteria | 6517 |
| 176 | Ga0495668_0029403 | 3300046616 | Bacteria | 3104 |
| 177 | Ga0495611_0008245 | 3300046648 | Bacteria | 4420 |
| 178 | Ga0495611_0025964 | 3300046648 | Bacteria | 2554 |
| 179 | Ga0495611_0050202 | 3300046648 | Bacteria | 1878 |
| 180 | Ga0495625_0001274 | 3300046660 | Bacteria | 31651 |
| 181 | Ga0495625_0001560 | 3300046660 | Bacteria | 27286 |
| 182 | Ga0495625_0012939 | 3300046660 | Bacteria | 6735 |
| 183 | Ga0495661_0000151 | 3300046665 | Bacteria | 81275 |
| 184 | Ga0495661_0000864 | 3300046665 | Bacteria | 28244 |
| 185 | Ga0495661_0063704 | 3300046665 | Bacteria | 2178 |
| 186 | Ga0495588_0000086 | 3300046674 | Bacteria | 193241 |
| 187 | Ga0495669_0005406 | 3300046684 | Bacteria | 5329 |
| 188 | Ga0495670_0035402 | 3300046691 | Bacteria | 2488 |
| 189 | Ga0495671_0000002 | 3300046692 | Bacteria | 1136189 |
| 190 | Ga0495671_0000505 | 3300046692 | Bacteria | 29965 |
| 191 | Ga0495671_0002160 | 3300046692 | Bacteria | 12533 |
| 192 | Ga0495671_0021890 | 3300046692 | Bacteria | 3352 |
| 193 | Ga0495649_0000880 | 3300046694 | Bacteria | 24063 |
| 194 | Ga0495649_0051021 | 3300046694 | Bacteria | 2244 |
| 195 | Ga0495589_0000017 | 3300046794 | Bacteria | 206113 |
| 196 | Ga0495589_0000112 | 3300046794 | Bacteria | 77426 |
| 197 | Ga0495589_0020616 | 3300046794 | Bacteria | 3371 |
| 198 | Ga0495589_0038916 | 3300046794 | Bacteria | 2378 |
| 199 | Ga0495660_0000067 | 3300046810 | Bacteria | 119390 |
| 200 | Ga0495660_0001777 | 3300046810 | Bacteria | 14262 |
| 201 | Ga0495660_0008179 | 3300046810 | Bacteria | 6136 |
| 202 | Ga0495660_0035452 | 3300046810 | Bacteria | 2787 |
| 203 | Ga0495672_0001252 | 3300047320 | Bacteria | 25503 |
| 204 | Ga0495672_0001478 | 3300047320 | Bacteria | 23059 |
| 205 | Ga0495680_0057010 | 3300047322 | Bacteria | 3023 |
| 206 | Ga0495683_0019488 | 3300047323 | Bacteria | 3500 |
| 207 | Ga0495683_0035410 | 3300047323 | Bacteria | 2537 |
| 208 | Ga0495687_000002 | 3300047443 | Bacteria | 1085770 |
| 209 | Ga0495687_000033 | 3300047443 | Bacteria | 263788 |
| 210 | Ga0495687_000081 | 3300047443 | Bacteria | 147362 |
| 211 | Ga0495687_000299 | 3300047443 | Bacteria | 65591 |
| 212 | Ga0495687_000818 | 3300047443 | Bacteria | 33347 |
| 213 | Ga0495687_000842 | 3300047443 | Bacteria | 32674 |
| 214 | Ga0495687_001048 | 3300047443 | Bacteria | 27433 |
| 215 | Ga0495687_001664 | 3300047443 | Bacteria | 19940 |
| 216 | Ga0495677_0000002 | 3300047445 | Bacteria | 346767 |
| 217 | Ga0495677_0000108 | 3300047445 | Bacteria | 41303 |
| 218 | Ga0495677_0001328 | 3300047445 | Bacteria | 9902 |
| 219 | Ga0495677_0006718 | 3300047445 | Bacteria | 4329 |
| 220 | Ga0495677_0007637 | 3300047445 | Bacteria | 4034 |
| 221 | Ga0495677_0017668 | 3300047445 | Bacteria | 2585 |
| 222 | Ga0495677_0029036 | 3300047445 | Bacteria | 2010 |
| 223 | Ga0495673_0000005 | 3300047469 | Bacteria | 943364 |
| 224 | Ga0495673_0000026 | 3300047469 | Bacteria | 476378 |
| 225 | Ga0495681_0000028 | 3300047470 | Bacteria | 139008 |
| 226 | Ga0495681_0003440 | 3300047470 | Bacteria | 11018 |
| 227 | Ga0495681_0020174 | 3300047470 | Bacteria | 3621 |
| 228 | Ga0495686_0000228 | 3300047472 | Bacteria | 103664 |
| 229 | Ga0495686_0014792 | 3300047472 | Bacteria | 5360 |
| 230 | Ga0495615_0006056 | 3300048090 | Bacteria | 2216 |
| 231 | Ga0495626_0000097 | 3300048091 | Bacteria | 113925 |
| 232 | Ga0495626_0000258 | 3300048091 | Bacteria | 60668 |
| 233 | Ga0495626_0001012 | 3300048091 | Bacteria | 24155 |
| 234 | Ga0495626_0002022 | 3300048091 | Bacteria | 14921 |
| 235 | Ga0495626_0005063 | 3300048091 | Bacteria | 7862 |
| 236 | Ga0495626_0006891 | 3300048091 | Bacteria | 6402 |
| 237 | Ga0495626_0007609 | 3300048091 | Bacteria | 6006 |
| 238 | Ga0495626_0011950 | 3300048091 | Bacteria | 4570 |
| 239 | Ga0496103_0000712 | 3300048906 | Bacteria | 24616 |
| 240 | Ga0496103_0001531 | 3300048906 | Bacteria | 15434 |
| 241 | Ga0496105_0113554 | 3300048908 | Bacteria | 2235 |
| 242 | Ga0496106_0041259 | 3300048909 | Bacteria | 3457 |
| 243 | Ga0496113_0007787 | 3300048916 | Bacteria | 6921 |
| 244 | Ga0496122_0002153 | 3300048925 | Bacteria | 28900 |
| 245 | Ga0496123_0002487 | 3300048926 | Bacteria | 22747 |
| 246 | Ga0496123_0010800 | 3300048926 | Bacteria | 8013 |
| 247 | Ga0496124_0049629 | 3300048927 | Bacteria | 3579 |
| 248 | Ga0496124_0091359 | 3300048927 | Bacteria | 2481 |
| 249 | Ga0496125_0128883 | 3300048928 | Bacteria | 1786 |
| 250 | Ga0496126_0005047 | 3300048929 | Bacteria | 15323 |
| 251 | Ga0495678_000102 | 3300049459 | Bacteria | 104107 |
| 252 | Ga0495678_005119 | 3300049459 | Bacteria | 7361 |
| 253 | Ga0495682_0012930 | 3300049460 | Bacteria | 3187 |
| 254 | Ga0501036_0087768 | 3300049572 | Bacteria | 2629 |
| 255 | Ga0501269_000589 | 3300049766 | Bacteria | 6595 |
| 256 | Ga0501279_001217 | 3300049775 | Bacteria | 3384 |
| 257 | Ga0501035_0001714 | 3300049822 | Bacteria | 22155 |
| 258 | Ga0500586_000876 | 3300053145 | Bacteria | 6221 |
| 259 | 2643800203 | 2643221556 | Bacteria | 7251154 |
| 260 | 2644258045 | 2643221646 | Bacteria | 6433402 |
| 261 | 2644472015 | 2643221684 | Bacteria | 7145183 |
| 262 | 2738829023 | 2738541297 | Bacteria | 6549566 |
| 263 | 2739152819 | 2738541357 | Bacteria | 6549408 |
| 264 | 2739194739 | 2738543003 | Bacteria | 6549560 |
| 265 | 2739321215 | 2738543026 | Bacteria | 6549408 |
| 266 | 2739339456 | 2738543029 | Bacteria | 6549249 |
| 267 | 2809143633 | 2808606418 | Bacteria | 6724496 |
| 268 | 2821133231 | 2821131069 | Bacteria | 6108407 |
| 269 | 2842717592 | 2842711865 | Bacteria | 7155354 |
| 270 | 2857563276 | 2857558681 | Bacteria | 6617694 |
| 271 | 2904427486 | 2904424332 | Bacteria | 7633521 |
| 272 | 2904429182 | 2904424332 | Bacteria | 7633521 |
| 273 | 8047674775 | 8047673197 | Bacteria | 7395230 |
| 274 | Ga0450897_000539 | |||
| 275 | JGI25154J39366_1000353 | |||
| 276 | rootL2_10041292 | |||
| 277 | Ga0055525_1000029 | |||
| 278 | Ga0055529_1000051 | |||
| 279 | Ga0055529_1000263 | |||
| 280 | Ga0055526_1000057 | |||
| 281 | Ga0065165_1024245 | |||
| 282 | Ga0070660_100005311 | |||
| 283 | Ga0070660_100005596 | |||
| 284 | Ga0070660_100013647 | |||
| 285 | Ga0070661_100022293 | |||
| 286 | Ga0070661_100058551 | |||
| 287 | Ga0070659_100004065 | |||
| 288 | Ga0070659_100016428 | |||
| 289 | Ga0070659_100046937 | |||
| 290 | Ga0070663_100011127 | |||
| 291 | Ga0068855_100042617 | |||
| 292 | Ga0068855_100110724 | |||
| 293 | Ga0068854_100029516 | |||
| 294 | Ga0068852_100014551 | |||
| 295 | Ga0068852_100129930 | |||
| 296 | Ga0075363_100045992 | |||
| 297 | Ga0105244_10006471 | |||
| 298 | Ga0105243_10048647 | |||
| 299 | Ga0105242_10034619 | |||
| 300 | Ga0157373_10114983 | |||
| 301 | Ga0209563_100003 | |||
| 302 | Ga0209646_1000007 | |||
| 303 | Ga0209677_102465 | |||
| 304 | Ga0209148_1001467 | |||
| 305 | Ga0209455_1000044 | |||
| 306 | Ga0209455_1000051 | |||
| 307 | Ga0209564_1000011 | |||
| 308 | Ga0207654_10068990 | |||
| 309 | Ga0207657_10003410 | |||
| 310 | Ga0207657_10004561 | |||
| 311 | Ga0207690_10001566 | |||
| 312 | Ga0207690_10038474 | |||
| 313 | Ga0207706_10117933 | |||
| 314 | Ga0207686_10007842 | |||
| 315 | Ga0207678_10009567 | |||
| 316 | Ga0207698_10009916 | |||
| 317 | Ga0307515_10069168 | |||
| 318 | Ga0307516_10002633 | |||
| 319 | Ga0373939_0005111 | |||
| 320 | Ga0395899_0000127 | |||
| 321 | Ga0395899_0009960 | |||
| 322 | Ga0395899_0062227 | |||
| 323 | Ga0395899_0073596 | |||
| 324 | Ga0395900_0000123 | |||
| 325 | Ga0395900_0018262 | |||
| 326 | Ga0395900_0027649 | |||
| 327 | Ga0395900_0052909 | |||
| 328 | Ga0395898_0091457 | |||
| 329 | Ga0395898_0122897 | |||
| 330 | Ga0395898_0143204 | |||
| 331 | Ga0395905_0000102 | |||
| 332 | Ga0395905_0003401 | |||
| 333 | Ga0395905_0075119 | |||
| 334 | Ga0395905_0093301 | |||
| 335 | Ga0395905_0145206 | |||
| 336 | Ga0395905_0210560 | |||
| 337 | Ga0395901_0000411 | |||
| 338 | Ga0395901_0001908 | |||
| 339 | Ga0395901_0006115 | |||
| 340 | Ga0395901_0085038 | |||
| 341 | Ga0439448_0000310 | |||
| 342 | Ga0466969_0034396 | |||
| 343 | Ga0466966_0046119 | |||
| 344 | Ga0466963_0139157 | |||
| 345 | Ga0466964_0000019 | |||
| 346 | Ga0466964_0000371 | |||
| 347 | Ga0466964_0061181 | |||
| 348 | Ga0466971_0054452 | |||
| 349 | Ga0466968_0000184 | |||
| 350 | Ga0466957_0000079 | |||
| 351 | Ga0466957_0011488 | |||
| 352 | Ga0466957_0097153 | |||
| 353 | Ga0466960_0018790 | |||
| 354 | Ga0466959_0017726 | |||
| 355 | Ga0466959_0063138 | |||
| 356 | Ga0466958_0037334 | |||
| 357 | Ga0466958_0046765 | |||
| 358 | Ga0466967_0004874 | |||
| 359 | Ga0466967_0009357 | |||
| 360 | Ga0495617_000004 | |||
| 361 | Ga0495627_003563 | |||
| 362 | Ga0495590_0000006 | |||
| 363 | Ga0495590_0025604 | |||
| 364 | Ga0495638_0000891 | |||
| 365 | Ga0495653_0016684 | |||
| 366 | Ga0495650_0000086 | |||
| 367 | Ga0495650_0000146 | |||
| 368 | Ga0495650_0000184 | |||
| 369 | Ga0495650_0001355 | |||
| 370 | Ga0495650_0001969 | |||
| 371 | Ga0495650_0002825 | |||
| 372 | Ga0495650_0020565 | |||
| 373 | Ga0495605_0000022 | |||
| 374 | Ga0495605_0000029 | |||
| 375 | Ga0495605_0008936 | |||
| 376 | Ga0495605_0010809 | |||
| 377 | Ga0495605_0018973 | |||
| 378 | Ga0495605_0024338 | |||
| 379 | Ga0495639_0011348 | |||
| 380 | Ga0495584_0003043 | |||
| 381 | Ga0495584_0008241 | |||
| 382 | Ga0495584_0034024 | |||
| 383 | Ga0495585_0021274 | |||
| 384 | Ga0495585_0048464 | |||
| 385 | Ga0495594_0010710 | |||
| 386 | Ga0495596_0000065 | |||
| 387 | Ga0495596_0006185 | |||
| 388 | Ga0495607_0002609 | |||
| 389 | Ga0495607_0008406 | |||
| 390 | Ga0495607_0019957 | |||
| 391 | Ga0495607_0026178 | |||
| 392 | Ga0495583_0000491 | |||
| 393 | Ga0495583_0001117 | |||
| 394 | Ga0495583_0001566 | |||
| 395 | Ga0495583_0014841 | |||
| 396 | Ga0495606_0000062 | |||
| 397 | Ga0495606_0000106 | |||
| 398 | Ga0495606_0002887 | |||
| 399 | Ga0495606_0003349 | |||
| 400 | Ga0495606_0019101 | |||
| 401 | Ga0495610_0000010 | |||
| 402 | Ga0495610_0002591 | |||
| 403 | Ga0495610_0014169 | |||
| 404 | Ga0495616_0001479 | |||
| 405 | Ga0495631_0003678 | |||
| 406 | Ga0495631_0025996 | |||
| 407 | Ga0495631_0025999 | |||
| 408 | Ga0495631_0045158 | |||
| 409 | Ga0495632_0000082 | |||
| 410 | Ga0495632_0001594 | |||
| 411 | Ga0495632_0003451 | |||
| 412 | Ga0495632_0008106 | |||
| 413 | Ga0495637_0000056 | |||
| 414 | Ga0495643_0000633 | |||
| 415 | Ga0495643_0008961 | |||
| 416 | Ga0495644_0005662 | |||
| 417 | Ga0495644_0012424 | |||
| 418 | Ga0495644_0015617 | |||
| 419 | Ga0495648_0000061 | |||
| 420 | Ga0495648_0001197 | |||
| 421 | Ga0495648_0002962 | |||
| 422 | Ga0495648_0011354 | |||
| 423 | Ga0495663_0001014 | |||
| 424 | Ga0495642_0001645 | |||
| 425 | Ga0495642_0002778 | |||
| 426 | Ga0495642_0016660 | |||
| 427 | Ga0495654_0000002 | |||
| 428 | Ga0495654_0002925 | |||
| 429 | Ga0495587_0041534 | |||
| 430 | Ga0495609_0000022 | |||
| 431 | Ga0495609_0001658 | |||
| 432 | Ga0495609_0011668 | |||
| 433 | Ga0495609_0017704 | |||
| 434 | Ga0495597_0000494 | |||
| 435 | Ga0495597_0000679 | |||
| 436 | Ga0495597_0003141 | |||
| 437 | Ga0495597_0004747 | |||
| 438 | Ga0495597_0011374 | |||
| 439 | Ga0495622_0000103 | |||
| 440 | Ga0495633_0002098 | |||
| 441 | Ga0495633_0006435 | |||
| 442 | Ga0495633_0064091 | |||
| 443 | Ga0495656_0004490 | |||
| 444 | Ga0495668_0000170 | |||
| 445 | Ga0495668_0001564 | |||
| 446 | Ga0495668_0002803 | |||
| 447 | Ga0495668_0006810 | |||
| 448 | Ga0495668_0008267 | |||
| 449 | Ga0495668_0029403 | |||
| 450 | Ga0495611_0008245 | |||
| 451 | Ga0495611_0025964 | |||
| 452 | Ga0495611_0050202 | |||
| 453 | Ga0495625_0001274 | |||
| 454 | Ga0495625_0001560 | |||
| 455 | Ga0495625_0012939 | |||
| 456 | Ga0495661_0000151 | |||
| 457 | Ga0495661_0000864 | |||
| 458 | Ga0495661_0063704 | |||
| 459 | Ga0495588_0000086 | |||
| 460 | Ga0495669_0005406 | |||
| 461 | Ga0495670_0035402 | |||
| 462 | Ga0495671_0000002 | |||
| 463 | Ga0495671_0000505 | |||
| 464 | Ga0495671_0002160 | |||
| 465 | Ga0495671_0021890 | |||
| 466 | Ga0495649_0000880 | |||
| 467 | Ga0495649_0051021 | |||
| 468 | Ga0495589_0000017 | |||
| 469 | Ga0495589_0000112 | |||
| 470 | Ga0495589_0020616 | |||
| 471 | Ga0495589_0038916 | |||
| 472 | Ga0495660_0000067 | |||
| 473 | Ga0495660_0001777 | |||
| 474 | Ga0495660_0008179 | |||
| 475 | Ga0495660_0035452 | |||
| 476 | Ga0495672_0001252 | |||
| 477 | Ga0495672_0001478 | |||
| 478 | Ga0495680_0057010 | |||
| 479 | Ga0495683_0019488 | |||
| 480 | Ga0495683_0035410 | |||
| 481 | Ga0495687_000002 | |||
| 482 | Ga0495687_000033 | |||
| 483 | Ga0495687_000081 | |||
| 484 | Ga0495687_000299 | |||
| 485 | Ga0495687_000818 | |||
| 486 | Ga0495687_000842 | |||
| 487 | Ga0495687_001048 | |||
| 488 | Ga0495687_001664 | |||
| 489 | Ga0495677_0000002 | |||
| 490 | Ga0495677_0000108 | |||
| 491 | Ga0495677_0001328 | |||
| 492 | Ga0495677_0006718 | |||
| 493 | Ga0495677_0007637 | |||
| 494 | Ga0495677_0017668 | |||
| 495 | Ga0495677_0029036 | |||
| 496 | Ga0495673_0000005 | |||
| 497 | Ga0495673_0000026 | |||
| 498 | Ga0495681_0000028 | |||
| 499 | Ga0495681_0003440 | |||
| 500 | Ga0495681_0020174 | |||
| 501 | Ga0495686_0000228 | |||
| 502 | Ga0495686_0014792 | |||
| 503 | Ga0495615_0006056 | |||
| 504 | Ga0495626_0000097 | |||
| 505 | Ga0495626_0000258 | |||
| 506 | Ga0495626_0001012 | |||
| 507 | Ga0495626_0002022 | |||
| 508 | Ga0495626_0005063 | |||
| 509 | Ga0495626_0006891 | |||
| 510 | Ga0495626_0007609 | |||
| 511 | Ga0495626_0011950 | |||
| 512 | Ga0496103_0000712 | |||
| 513 | Ga0496103_0001531 | |||
| 514 | Ga0496105_0113554 | |||
| 515 | Ga0496106_0041259 | |||
| 516 | Ga0496113_0007787 | |||
| 517 | Ga0496122_0002153 | |||
| 518 | Ga0496123_0002487 | |||
| 519 | Ga0496123_0010800 | |||
| 520 | Ga0496124_0049629 | |||
| 521 | Ga0496124_0091359 | |||
| 522 | Ga0496125_0128883 | |||
| 523 | Ga0496126_0005047 | |||
| 524 | Ga0495678_000102 | |||
| 525 | Ga0495678_005119 | |||
| 526 | Ga0495682_0012930 | |||
| 527 | Ga0501036_0087768 | |||
| 528 | Ga0501269_000589 | |||
| 529 | Ga0501279_001217 | |||
| 530 | Ga0501035_0001714 | |||
| 531 | Ga0500586_000876 | |||
| 532 | 2643800203 | |||
| 533 | 2644258045 | |||
| 534 | 2644472015 | |||
| 535 | 2738829023 | |||
| 536 | 2739152819 | |||
| 537 | 2739194739 | |||
| 538 | 2739321215 | |||
| 539 | 2739339456 | |||
| 540 | 2809143633 | |||
| 541 | 2821133231 | |||
| 542 | 2842717592 | |||
| 543 | 2857563276 | |||
| 544 | 2904427486 | |||
| 545 | 2904429182 | |||
| 546 | 8047674775 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6y1w-assembly1.cif.gz_B | xcc4156, a flavin-dependent halogenase from xanthomonas campestris | 0.9724 | 10 | 506 |
| 6frl-assembly1.cif.gz_A | brvh, a flavin-dependent halogenase from brevundimonas sp. bal3 | 0.9623 | 10 | 504 |
| 6frl-assembly1.cif.gz_B | brvh, a flavin-dependent halogenase from brevundimonas sp. bal3 | 0.9604 | 11 | 506 |
| 6y1w-assembly1.cif.gz_B | xcc4156, a flavin-dependent halogenase from xanthomonas campestris | 0.955 | 10 | 506 |
| 6frl-assembly1.cif.gz_A | brvh, a flavin-dependent halogenase from brevundimonas sp. bal3 | 0.9528 | 10 | 504 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 6frlA00 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9623 | 10 | 504 | 3.50.50.60 |
| 6frlA00 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9528 | 10 | 504 | 3.50.50.60 |
| 2jkcA00 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9202 | 9 | 506 | 3.50.50.60 |
| 2wetA00 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.8987 | 11 | 506 | 3.50.50.60 |
| 2wetA00 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.8934 | 11 | 506 | 3.50.50.60 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7X3K6X5-F1-model_v4 | FAD-dependent oxidoreductase | 0.9902 | 9 | 507 |
GO:0000166
GO:0004497 |
| AF-B9THG3-F1-model_v4 | Tryptophan halogenase | 0.9888 | 42 | 468 |
GO:0004497
|
| AF-A0A845HHE7-F1-model_v4 | Tryptophan halogenase | 0.9871 | 9 | 507 |
GO:0000166
GO:0004497 |
| AF-A0A519HAK9-F1-model_v4 | Tryptophan halogenase | 0.9835 | 256 | 505 |
GO:0004497
|
| AF-A0A086WCI7-F1-model_v4 | Tryptophan halogenase | 0.9815 | 7 | 515 |
GO:0000166
GO:0004497 |