F379963

General Info

Members Datasets Scaffolds Average Seq Length
274 200 548 594

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0003114|Ga0495668_0003114_6413_8620
Length 691
Sequence VAAGPVRGVRAGAPRRDGAAGAGDAFGLIGRARRLHLTSPLARLSQKSAAGAARIQASCATDVAFAVSVYLPLSGRPDGIGTTRPASSPTDTTEITMSPSFPHRASARITVLSAADGATDVATRLKAFNALVDEQWEGLMRELPEQASFFGDYRYNDAWSDFSLAGAQRHNQATRALLARFKAVDTRGFPESDLLNHRLMVRWLENDLQGYALKTHEMPLDQFNGTHLILTIMVKAFPFNDTQQYDDYLKRLREIPRILDQVTQVARQGAKDGLMQPRYLLDKVAAQCNGIADAAGEDNVFAASLKKFPDSVPAAERERLRKQILEAVDQQVRPAYRQLAEFVSKEYAPQGREQYGVWSLPGGDGLYRYAIEQFTTSSTSPEKIHQLGLSEVTRIEKEQTRIAKTLGYADLKTMREAVAADPKRHATSREQILDLYREYLAKMETKLPELFATLPTTQVQVQSVEAWREKEASAAQYMAGTPDGKRPGLITVNTGEPEKRLLTTIEAVAYHEGVPGHHLQLSMSRALPELPKFRTLLGQTAFIEGWGLYSEDLGKEVGFYQDPYSDFGRLSQELIRANRLVLDTGVHYKRWTREQMVQWMRDHSDMEEPNIQAEADRYIAWPGQALAYKMGQLKIRELRARAQAKLGKRFDRRVFHDQILGGGALPLRELETRIDAWIAATQRGAAAKAAK

Samples

Sample ID Description Type Environment
1 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
8 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
9 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
10 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
46 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
79 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
80 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
81 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
137 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
138 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
142 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
143 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
144 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
145 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
146 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
147 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
148 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
149 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
150 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
151 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
152 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
153 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
154 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
155 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
156 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
157 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
158 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
159 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
160 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
161 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
162 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
163 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
164 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
165 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
166 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
173 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
174 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
175 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
176 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
177 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
181 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
182 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
183 2643221559 Lysobacter sp. Root559 Isolate Unclassified
184 2643221573 Lysobacter sp. Root604 Isolate Unclassified
185 2643221586 Lysobacter sp. Root667 Isolate Unclassified
186 2643221593 Lysobacter sp. Root690 Isolate Unclassified
187 2643221612 Lysobacter sp. Root76 Isolate Unclassified
188 2643221720 Lysobacter sp. Root916 Isolate Unclassified
189 2643221727 Lysobacter sp. Root96 Isolate Unclassified
190 2643221728 Lysobacter sp. Root983 Isolate Unclassified
191 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
192 2818991457 Xanthomonas translucens 569 Isolate Unclassified
193 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
194 2887630918 Psychrosphaera haliotis UCD-MCMsp1aY Isolate Unclassified
195 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
196 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
197 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
198 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
199 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
200 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.43
Metatranscriptomes 0
Isolates 6.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.47
Nodule 0
Rhizoplane 2.19
Rhizosphere 82.12
Stem 0
Stem Tuber 0
Unclassified 9.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495668_0003114 3300046616 Bacteria 12812
2 JGI25151J46595_10000117 3300003187 Bacteria 106850
3 rootH1_10036659 3300003323 Bacteria 4588
4 Ga0055526_1000397 3300003771 Bacteria 35160
5 Ga0055537_1001614 3300003773 Bacteria 8483
6 Ga0055524_1000002 3300003775 Bacteria 459550
7 Ga0055534_1000274 3300003784 Bacteria 35160
8 Ga0055528_1000155 3300003790 Bacteria 56992
9 Ga0058692_1000006 3300003856 Bacteria 398109
10 Ga0065715_10015665 3300005293 Unclassified 2635
11 Ga0065715_10113314 3300005293 Bacteria 2495
12 Ga0070658_10014297 3300005327 Bacteria 6369
13 Ga0070676_10004272 3300005328 Bacteria 7505
14 Ga0070683_100012083 3300005329 Bacteria 7491
15 Ga0070683_100086220 3300005329 Bacteria 2944
16 Ga0070690_100025067 3300005330 Unclassified 3671
17 Ga0070670_100008923 3300005331 Bacteria 8562
18 Ga0070670_100110386 3300005331 Bacteria 2369
19 Ga0070680_100051825 3300005336 Unclassified 3350
20 Ga0068868_100011824 3300005338 Bacteria 6364
21 Ga0068868_100033092 3300005338 Unclassified 3983
22 Ga0070660_100007036 3300005339 Bacteria 7812
23 Ga0070689_100010196 3300005340 Bacteria 6692
24 Ga0070689_100136427 3300005340 Unclassified 1970
25 Ga0070668_100013314 3300005347 Bacteria 6138
26 Ga0070669_100043537 3300005353 Bacteria 3270
27 Ga0070675_100000012 3300005354 Bacteria 217352
28 Ga0070673_100045930 3300005364 Unclassified 3390
29 Ga0070659_100002342 3300005366 Bacteria 13464
30 Ga0070667_100003795 3300005367 Bacteria 12853
31 Ga0070714_100008101 3300005435 Bacteria 8189
32 Ga0070714_100058157 3300005435 Bacteria 3311
33 Ga0070708_100000679 3300005445 Bacteria 25845
34 Ga0070663_100002143 3300005455 Bacteria 11038
35 Ga0070706_100020271 3300005467 Bacteria 6128
36 Ga0070706_100032061 3300005467 Bacteria 4846
37 Ga0070707_100014588 3300005468 Bacteria 7368
38 Ga0070707_100042742 3300005468 Bacteria 4339
39 Ga0070698_100018725 3300005471 Bacteria 7290
40 Ga0070698_100157044 3300005471 Bacteria 2220
41 Ga0070699_100001670 3300005518 Bacteria 20231
42 Ga0070699_100002225 3300005518 Bacteria 17516
43 Ga0070679_100036215 3300005530 Bacteria 4897
44 Ga0070679_100063317 3300005530 Unclassified 3687
45 Ga0070679_100173299 3300005530 Bacteria 2130
46 Ga0070697_100001678 3300005536 Bacteria 16909
47 Ga0068853_100001353 3300005539 Bacteria 17658
48 Ga0068853_100035591 3300005539 Bacteria 4230
49 Ga0068853_100176486 3300005539 Unclassified 1935
50 Ga0070686_100007805 3300005544 Bacteria 5981
51 Ga0070696_100086018 3300005546 Bacteria 2232
52 Ga0070665_100064509 3300005548 Bacteria 3673
53 Ga0070665_100110830 3300005548 Bacteria 2747
54 Ga0068855_100001183 3300005563 Bacteria 32426
55 Ga0068855_100013161 3300005563 Bacteria 9978
56 Ga0068855_100038911 3300005563 Bacteria 5647
57 Ga0068856_100000798 3300005614 Bacteria 33950
58 Ga0068856_100017582 3300005614 Bacteria 6929
59 Ga0068856_100022936 3300005614 Bacteria 6069
60 Ga0070702_100001029 3300005615 Bacteria 11058
61 Ga0068852_100009677 3300005616 Bacteria 7163
62 Ga0068859_100208102 3300005617 Unclassified 2042
63 Ga0068864_100019970 3300005618 Bacteria 5602
64 Ga0068866_10003847 3300005718 Bacteria 6163
65 Ga0068870_10008143 3300005840 Unclassified 4699
66 Ga0068858_100041774 3300005842 Bacteria 4251
67 Ga0070717_10069872 3300006028 Unclassified 2925
68 Ga0075428_100095040 3300006844 Bacteria 3249
69 Ga0075431_100002903 3300006847 Bacteria 16580
70 Ga0075433_10054981 3300006852 Bacteria 3474
71 Ga0075433_10055426 3300006852 Bacteria 3461
72 Ga0075434_100059113 3300006871 Bacteria 3811
73 Ga0068865_100026976 3300006881 Unclassified 3791
74 Ga0075436_100000264 3300006914 Bacteria 32917
75 Ga0097620_100208100 3300006931 Unclassified 2042
76 Ga0105251_10000048 3300009011 Bacteria 110218
77 Ga0105240_10000341 3300009093 Bacteria 87370
78 Ga0105240_10032696 3300009093 Bacteria 6732
79 Ga0105240_10044885 3300009093 Bacteria 5611
80 Ga0105240_10048284 3300009093 Bacteria 5381
81 Ga0105240_10058355 3300009093 Bacteria 4818
82 Ga0105240_10117771 3300009093 Unclassified 3202
83 Ga0105245_10016822 3300009098 Bacteria 6385
84 Ga0114129_10004066 3300009147 Bacteria 20649
85 Ga0114129_10037972 3300009147 Bacteria 6794
86 Ga0114129_10123210 3300009147 Bacteria 3566
87 Ga0105243_10004273 3300009148 Bacteria 11313
88 Ga0105241_10016855 3300009174 Bacteria 5362
89 Ga0105242_10024708 3300009176 Bacteria 4748
90 Ga0105242_10082847 3300009176 Unclassified 2685
91 Ga0105248_10000926 3300009177 Bacteria 32639
92 Ga0105248_10003848 3300009177 Bacteria 16621
93 Ga0105248_10191726 3300009177 Bacteria 2303
94 Ga0105237_10013981 3300009545 Bacteria 8400
95 Ga0105237_10082085 3300009545 Bacteria 3215
96 Ga0105237_10188294 3300009545 Bacteria 2064
97 Ga0105238_10000417 3300009551 Bacteria 44911
98 Ga0105238_10017955 3300009551 Bacteria 7193
99 Ga0105249_10000145 3300009553 Bacteria 91408
100 Ga0105249_10205517 3300009553 Unclassified 1929
101 Ga0105239_10037247 3300010375 Bacteria 5334
102 Ga0105239_10083737 3300010375 Bacteria 3513
103 Ga0105239_10115875 3300010375 Bacteria 2973
104 Ga0105239_10137142 3300010375 Bacteria 2724
105 Ga0105246_10001466 3300011119 Bacteria 14010
106 Ga0157371_10035957 3300013102 Unclassified 3547
107 Ga0157369_10007186 3300013105 Bacteria 12832
108 Ga0157369_10011114 3300013105 Bacteria 10237
109 Ga0157374_10000407 3300013296 Bacteria 39138
110 Ga0157372_10028056 3300013307 Bacteria 6140
111 Ga0157372_10039800 3300013307 Bacteria 5189
112 Ga0157375_10072867 3300013308 Unclassified 3452
113 Ga0163163_10001199 3300014325 Bacteria 21935
114 Ga0163163_10013446 3300014325 Bacteria 7496
115 Ga0163163_10090808 3300014325 Bacteria 3068
116 Ga0157380_10052757 3300014326 Bacteria 3221
117 Ga0157377_10000304 3300014745 Bacteria 22848
118 Ga0157376_10011467 3300014969 Bacteria 6535
119 Ga0157376_10049213 3300014969 Bacteria 3490
120 Ga0183360_10003 3300015689 Bacteria 713221
121 Ga0213876_10001737 3300021384 Bacteria 13233
122 Ga0207425_1001086 3300025245 Bacteria 12366
123 Ga0209565_1000002 3300025263 Bacteria 1423083
124 Ga0209673_1000002 3300025273 Bacteria 1423083
125 Ga0209675_1000002 3300025291 Bacteria 1423083
126 Ga0209025_1000030 3300025294 Bacteria 441196
127 Ga0209564_1000004 3300025295 Bacteria 1424639
128 Ga0209256_1000004 3300025299 Bacteria 1424643
129 Ga0207697_10005079 3300025315 Bacteria 6163
130 Ga0207713_1002271 3300025735 Bacteria 14165
131 Ga0207692_10011312 3300025898 Bacteria 3792
132 Ga0207688_10003382 3300025901 Bacteria 8706
133 Ga0207680_10008323 3300025903 Bacteria 5083
134 Ga0207647_10008672 3300025904 Bacteria 7263
135 Ga0207645_10003138 3300025907 Bacteria 12670
136 Ga0207643_10006284 3300025908 Bacteria 6358
137 Ga0207684_10002506 3300025910 Bacteria 18474
138 Ga0207684_10002741 3300025910 Bacteria 17548
139 Ga0207684_10006385 3300025910 Bacteria 10745
140 Ga0207654_10027688 3300025911 Unclassified 3083
141 Ga0207695_10000609 3300025913 Bacteria 71895
142 Ga0207695_10001115 3300025913 Bacteria 46659
143 Ga0207695_10014190 3300025913 Bacteria 9452
144 Ga0207671_10000752 3300025914 Bacteria 41110
145 Ga0207671_10012615 3300025914 Bacteria 6788
146 Ga0207693_10036336 3300025915 Bacteria 3883
147 Ga0207662_10008659 3300025918 Bacteria 5581
148 Ga0207662_10010181 3300025918 Bacteria 5185
149 Ga0207657_10012124 3300025919 Bacteria 8517
150 Ga0207649_10000566 3300025920 Bacteria 25447
151 Ga0207652_10027864 3300025921 Bacteria 4711
152 Ga0207646_10004918 3300025922 Bacteria 14290
153 Ga0207646_10005921 3300025922 Bacteria 12760
154 Ga0207646_10018974 3300025922 Bacteria 6403
155 Ga0207681_10117006 3300025923 Bacteria 1948
156 Ga0207694_10031961 3300025924 Bacteria 4025
157 Ga0207650_10000051 3300025925 Bacteria 168652
158 Ga0207650_10053438 3300025925 Bacteria 2994
159 Ga0207659_10000003 3300025926 Bacteria 523949
160 Ga0207659_10007484 3300025926 Bacteria 6718
161 Ga0207687_10059207 3300025927 Bacteria 2697
162 Ga0207700_10041172 3300025928 Bacteria 3378
163 Ga0207664_10019362 3300025929 Bacteria 5029
164 Ga0207664_10070162 3300025929 Bacteria 2819
165 Ga0207706_10011949 3300025933 Bacteria 7905
166 Ga0207686_10002886 3300025934 Bacteria 9267
167 Ga0207709_10002674 3300025935 Bacteria 11055
168 Ga0207670_10015905 3300025936 Unclassified 4506
169 Ga0207704_10005393 3300025938 Bacteria 5895
170 Ga0207665_10001357 3300025939 Bacteria 16498
171 Ga0207691_10001789 3300025940 Bacteria 21139
172 Ga0207711_10000717 3300025941 Bacteria 32656
173 Ga0207689_10000184 3300025942 Bacteria 54232
174 Ga0207679_10000101 3300025945 Bacteria 71096
175 Ga0207667_10018170 3300025949 Bacteria 7893
176 Ga0207667_10022737 3300025949 Bacteria 6916
177 Ga0207667_10208862 3300025949 Unclassified 2001
178 Ga0207712_10000124 3300025961 Bacteria 83410
179 Ga0207668_10018619 3300025972 Unclassified 4374
180 Ga0207658_10000032 3300025986 Bacteria 162260
181 Ga0207658_10076247 3300025986 Bacteria 2553
182 Ga0207639_10007068 3300026041 Bacteria 7656
183 Ga0207639_10044828 3300026041 Unclassified 3328
184 Ga0207678_10002190 3300026067 Bacteria 17649
185 Ga0207678_10002981 3300026067 Bacteria 15317
186 Ga0207678_10006163 3300026067 Bacteria 10667
187 Ga0207702_10000907 3300026078 Bacteria 30729
188 Ga0207702_10043881 3300026078 Unclassified 3756
189 Ga0207702_10122340 3300026078 Bacteria 2330
190 Ga0207641_10000006 3300026088 Bacteria 442569
191 Ga0207648_10000664 3300026089 Bacteria 38538
192 Ga0207676_10000155 3300026095 Bacteria 59757
193 Ga0207674_10002842 3300026116 Bacteria 21530
194 Ga0207674_10003266 3300026116 Bacteria 19946
195 Ga0207675_100014645 3300026118 Bacteria 7313
196 Ga0207675_100150652 3300026118 Unclassified 2213
197 Ga0207683_10001670 3300026121 Bacteria 19882
198 Ga0209371_1000016 3300027312 Bacteria 646301
199 Ga0209971_1003592 3300027682 Bacteria 3671
200 Ga0209998_10004491 3300027717 Bacteria 2961
201 Ga0209998_10007873 3300027717 Bacteria 2211
202 Ga0209974_10003812 3300027876 Bacteria 5404
203 Ga0268266_10002191 3300028379 Bacteria 21364
204 Ga0268264_10001226 3300028381 Bacteria 24663
205 Ga0265338_10001506 3300028800 Bacteria 37692
206 Ga0268256_1000015 3300030500 Bacteria 646300
207 Ga0265342_10038810 3300031712 Bacteria 2898
208 Ga0307406_10002076 3300031901 Bacteria 10942
209 Ga0307407_10069742 3300031903 Bacteria 2088
210 Ga0307409_100008906 3300031995 Bacteria 6129
211 Ga0307510_10022189 3300033180 Bacteria 7378
212 Ga0373935_0025272 3300035692 Bacteria 3660
213 Ga0373937_0009258 3300036401 Bacteria 8551
214 Ga0373925_0003036 3300037068 Bacteria 13205
215 Ga0395905_0000011 3300037471 Bacteria 424563
216 Ga0395905_0037320 3300037471 Bacteria 4563
217 Ga0395905_0047889 3300037471 Bacteria 4006
218 Ga0395905_0065538 3300037471 Bacteria 3401
219 Ga0395905_0106017 3300037471 Bacteria 2639
220 Ga0436365_1256047 3300039437 Bacteria 19784
221 Ga0436365_1672232 3300039437 Bacteria 23925
222 Ga0439436_0005904 3300041404 Bacteria 3753
223 Ga0439436_0008522 3300041404 Bacteria 3154
224 Ga0439439_0002429 3300041406 Bacteria 3958
225 Ga0439447_000679 3300041407 Bacteria 12636
226 Ga0495580_0000888 3300046472 Bacteria 25988
227 Ga0495582_0001780 3300046473 Bacteria 12165
228 Ga0495610_0000177 3300046512 Bacteria 70985
229 Ga0495665_0008778 3300046531 Bacteria 5485
230 Ga0495633_0032901 3300046558 Bacteria 2502
231 Ga0495675_0028733 3300047444 Bacteria 3544
232 Ga0495684_0010877 3300047471 Bacteria 7035
233 Ga0495686_0008322 3300047472 Bacteria 7625
234 Ga0495602_0023491 3300048088 Bacteria 6004
235 Ga0496108_0001035 3300048911 Bacteria 21687
236 Ga0496109_0000126 3300048912 Bacteria 77920
237 Ga0496110_0000429 3300048913 Bacteria 28526
238 Ga0496111_0015037 3300048914 Bacteria 5301
239 Ga0496112_0000615 3300048915 Bacteria 24595
240 Ga0496112_0054537 3300048915 Bacteria 3928
241 Ga0496117_0000785 3300048920 Bacteria 49837
242 Ga0496119_0003604 3300048922 Bacteria 15938
243 Ga0496120_0000276 3300048923 Bacteria 86130
244 Ga0496122_0000302 3300048925 Bacteria 109564
245 Ga0496122_0002179 3300048925 Bacteria 28682
246 Ga0496123_0000374 3300048926 Bacteria 83982
247 Ga0496123_0000690 3300048926 Bacteria 55748
248 Ga0496124_0001048 3300048927 Bacteria 43639
249 Ga0496126_0028353 3300048929 Bacteria 5338
250 Ga0496126_0038890 3300048929 Bacteria 4422
251 Ga0501036_0112782 3300049572 Bacteria 2298
252 Ga0501083_0000517 3300049744 Bacteria 24634
253 nmdc:mga0n895_50288_c1 3300050512 Bacteria 4085
254 nmdc:mga0a205_65659_c1 3300050515 Bacteria 3506
255 Ga0500597_000103 3300053120 Bacteria 17593
256 Ga0500634_0000204 3300053161 Bacteria 19115
257 2643816887 2643221559 Bacteria 4424915
258 2643881174 2643221573 Bacteria 4784121
259 2643939307 2643221586 Bacteria 4446529
260 2643977433 2643221593 Bacteria 6296053
261 2644077989 2643221612 Bacteria 4361984
262 2644661946 2643221720 Bacteria 4694283
263 2644696290 2643221727 Bacteria 4415595
264 2644700085 2643221728 Bacteria 4797149
265 2748016445 2747842501 Bacteria 5293829
266 2819660020 2818991457 Bacteria 5323295
267 2852685164 2852684882 Bacteria 5463342
268 2887634025 2887630918 Bacteria 3239855
269 2919130704 2919130084 Bacteria 5301837
270 2929198293 2929195423 Bacteria 5325372
271 2995953397 2995948881 Bacteria 6358104
272 8021622749 8021622325 Bacteria 4844743
273 8021630193 8021626552 Bacteria 4665214
274 8021648145 8021648035 Bacteria 4772378
275 Ga0495668_0003114
276 JGI25151J46595_10000117
277 rootH1_10036659
278 Ga0055526_1000397
279 Ga0055537_1001614
280 Ga0055524_1000002
281 Ga0055534_1000274
282 Ga0055528_1000155
283 Ga0058692_1000006
284 Ga0065715_10015665
285 Ga0065715_10113314
286 Ga0070658_10014297
287 Ga0070676_10004272
288 Ga0070683_100012083
289 Ga0070683_100086220
290 Ga0070690_100025067
291 Ga0070670_100008923
292 Ga0070670_100110386
293 Ga0070680_100051825
294 Ga0068868_100011824
295 Ga0068868_100033092
296 Ga0070660_100007036
297 Ga0070689_100010196
298 Ga0070689_100136427
299 Ga0070668_100013314
300 Ga0070669_100043537
301 Ga0070675_100000012
302 Ga0070673_100045930
303 Ga0070659_100002342
304 Ga0070667_100003795
305 Ga0070714_100008101
306 Ga0070714_100058157
307 Ga0070708_100000679
308 Ga0070663_100002143
309 Ga0070706_100020271
310 Ga0070706_100032061
311 Ga0070707_100014588
312 Ga0070707_100042742
313 Ga0070698_100018725
314 Ga0070698_100157044
315 Ga0070699_100001670
316 Ga0070699_100002225
317 Ga0070679_100036215
318 Ga0070679_100063317
319 Ga0070679_100173299
320 Ga0070697_100001678
321 Ga0068853_100001353
322 Ga0068853_100035591
323 Ga0068853_100176486
324 Ga0070686_100007805
325 Ga0070696_100086018
326 Ga0070665_100064509
327 Ga0070665_100110830
328 Ga0068855_100001183
329 Ga0068855_100013161
330 Ga0068855_100038911
331 Ga0068856_100000798
332 Ga0068856_100017582
333 Ga0068856_100022936
334 Ga0070702_100001029
335 Ga0068852_100009677
336 Ga0068859_100208102
337 Ga0068864_100019970
338 Ga0068866_10003847
339 Ga0068870_10008143
340 Ga0068858_100041774
341 Ga0070717_10069872
342 Ga0075428_100095040
343 Ga0075431_100002903
344 Ga0075433_10054981
345 Ga0075433_10055426
346 Ga0075434_100059113
347 Ga0068865_100026976
348 Ga0075436_100000264
349 Ga0097620_100208100
350 Ga0105251_10000048
351 Ga0105240_10000341
352 Ga0105240_10032696
353 Ga0105240_10044885
354 Ga0105240_10048284
355 Ga0105240_10058355
356 Ga0105240_10117771
357 Ga0105245_10016822
358 Ga0114129_10004066
359 Ga0114129_10037972
360 Ga0114129_10123210
361 Ga0105243_10004273
362 Ga0105241_10016855
363 Ga0105242_10024708
364 Ga0105242_10082847
365 Ga0105248_10000926
366 Ga0105248_10003848
367 Ga0105248_10191726
368 Ga0105237_10013981
369 Ga0105237_10082085
370 Ga0105237_10188294
371 Ga0105238_10000417
372 Ga0105238_10017955
373 Ga0105249_10000145
374 Ga0105249_10205517
375 Ga0105239_10037247
376 Ga0105239_10083737
377 Ga0105239_10115875
378 Ga0105239_10137142
379 Ga0105246_10001466
380 Ga0157371_10035957
381 Ga0157369_10007186
382 Ga0157369_10011114
383 Ga0157374_10000407
384 Ga0157372_10028056
385 Ga0157372_10039800
386 Ga0157375_10072867
387 Ga0163163_10001199
388 Ga0163163_10013446
389 Ga0163163_10090808
390 Ga0157380_10052757
391 Ga0157377_10000304
392 Ga0157376_10011467
393 Ga0157376_10049213
394 Ga0183360_10003
395 Ga0213876_10001737
396 Ga0207425_1001086
397 Ga0209565_1000002
398 Ga0209673_1000002
399 Ga0209675_1000002
400 Ga0209025_1000030
401 Ga0209564_1000004
402 Ga0209256_1000004
403 Ga0207697_10005079
404 Ga0207713_1002271
405 Ga0207692_10011312
406 Ga0207688_10003382
407 Ga0207680_10008323
408 Ga0207647_10008672
409 Ga0207645_10003138
410 Ga0207643_10006284
411 Ga0207684_10002506
412 Ga0207684_10002741
413 Ga0207684_10006385
414 Ga0207654_10027688
415 Ga0207695_10000609
416 Ga0207695_10001115
417 Ga0207695_10014190
418 Ga0207671_10000752
419 Ga0207671_10012615
420 Ga0207693_10036336
421 Ga0207662_10008659
422 Ga0207662_10010181
423 Ga0207657_10012124
424 Ga0207649_10000566
425 Ga0207652_10027864
426 Ga0207646_10004918
427 Ga0207646_10005921
428 Ga0207646_10018974
429 Ga0207681_10117006
430 Ga0207694_10031961
431 Ga0207650_10000051
432 Ga0207650_10053438
433 Ga0207659_10000003
434 Ga0207659_10007484
435 Ga0207687_10059207
436 Ga0207700_10041172
437 Ga0207664_10019362
438 Ga0207664_10070162
439 Ga0207706_10011949
440 Ga0207686_10002886
441 Ga0207709_10002674
442 Ga0207670_10015905
443 Ga0207704_10005393
444 Ga0207665_10001357
445 Ga0207691_10001789
446 Ga0207711_10000717
447 Ga0207689_10000184
448 Ga0207679_10000101
449 Ga0207667_10018170
450 Ga0207667_10022737
451 Ga0207667_10208862
452 Ga0207712_10000124
453 Ga0207668_10018619
454 Ga0207658_10000032
455 Ga0207658_10076247
456 Ga0207639_10007068
457 Ga0207639_10044828
458 Ga0207678_10002190
459 Ga0207678_10002981
460 Ga0207678_10006163
461 Ga0207702_10000907
462 Ga0207702_10043881
463 Ga0207702_10122340
464 Ga0207641_10000006
465 Ga0207648_10000664
466 Ga0207676_10000155
467 Ga0207674_10002842
468 Ga0207674_10003266
469 Ga0207675_100014645
470 Ga0207675_100150652
471 Ga0207683_10001670
472 Ga0209371_1000016
473 Ga0209971_1003592
474 Ga0209998_10004491
475 Ga0209998_10007873
476 Ga0209974_10003812
477 Ga0268266_10002191
478 Ga0268264_10001226
479 Ga0265338_10001506
480 Ga0268256_1000015
481 Ga0265342_10038810
482 Ga0307406_10002076
483 Ga0307407_10069742
484 Ga0307409_100008906
485 Ga0307510_10022189
486 Ga0373935_0025272
487 Ga0373937_0009258
488 Ga0373925_0003036
489 Ga0395905_0000011
490 Ga0395905_0037320
491 Ga0395905_0047889
492 Ga0395905_0065538
493 Ga0395905_0106017
494 Ga0436365_1256047
495 Ga0436365_1672232
496 Ga0439436_0005904
497 Ga0439436_0008522
498 Ga0439439_0002429
499 Ga0439447_000679
500 Ga0495580_0000888
501 Ga0495582_0001780
502 Ga0495610_0000177
503 Ga0495665_0008778
504 Ga0495633_0032901
505 Ga0495675_0028733
506 Ga0495684_0010877
507 Ga0495686_0008322
508 Ga0495602_0023491
509 Ga0496108_0001035
510 Ga0496109_0000126
511 Ga0496110_0000429
512 Ga0496111_0015037
513 Ga0496112_0000615
514 Ga0496112_0054537
515 Ga0496117_0000785
516 Ga0496119_0003604
517 Ga0496120_0000276
518 Ga0496122_0000302
519 Ga0496122_0002179
520 Ga0496123_0000374
521 Ga0496123_0000690
522 Ga0496124_0001048
523 Ga0496126_0028353
524 Ga0496126_0038890
525 Ga0501036_0112782
526 Ga0501083_0000517
527 nmdc:mga0n895_50288_c1
528 nmdc:mga0a205_65659_c1
529 Ga0500597_000103
530 Ga0500634_0000204
531 2643816887
532 2643881174
533 2643939307
534 2643977433
535 2644077989
536 2644661946
537 2644696290
538 2644700085
539 2748016445
540 2819660020
541 2852685164
542 2887634025
543 2919130704
544 2929198293
545 2995953397
546 8021622749
547 8021630193
548 8021648145

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05960

DUF885

Bacterial protein of unknown function (DUF885)

144

674

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.936 15 570
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.9346 15 570
3o0y-assembly2.cif.gz_B the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.897 15 570
3o0y-assembly4.cif.gz_A the crystal structure of the putative lipoprotein from colwellia psychrerythraea 0.8958 15 570
3iuk-assembly2.cif.gz_B crystal structure of putative bacterial protein of unknown function (duf885, pf05960.1, ) from arthrobacter aurescens tc1, reveals fold similar to that of m32 carboxypeptidases 0.8702 18 565
ID Description Score Start End Superfamily
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.9189 41 564 1.10.1370.30
af_Q54Y95_120_681_1.10.1370.30 Mainly Alpha;Orthogonal Bundle;Neurolysin; domain 3; 0.858 41 564 1.10.1370.30
af_Q54JL3_326_535_1.20.120.680 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.358 82 237 1.20.120.680
4pr9D00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.284 58 245 1.20.120.230
4pr9F00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.2681 58 232 1.20.120.230
ID Description Score Start End GO Terms
AF-A0A4Q5SDL1-F1-model_v4 DUF885 family protein 0.9883 461 574
AF-A0A7X5N3H8-F1-model_v4 DUF885 family protein 0.9863 422 570
AF-A0A356W2A5-F1-model_v4 DUF885 domain-containing protein 0.9844 402 572
AF-M4RTT3-F1-model_v4 Lipoprotein 0.9838 421 570
AF-A0A7C1XXR9-F1-model_v4 DUF885 domain-containing protein 0.9832 393 570

Map