F382147

General Info

Members Datasets Scaffolds Average Seq Length
278 232 556 505

Family's Representative Sequence

Representative Sequence 3300003775|Ga0055524_1000117|Ga0055524_100011778
Length 539
Sequence MTFPNAAAAGARAGTASPGAAGEGFPATLTVHRDFAIGALDRRLFGAFVEHLGRCVYTGIFEPGHPTADEQGFRGDVKALVKELGVTLVRYPGGNFMSGYDWEDGVGPRDQRPRRLDLAWYSTETNQVGTNEFMAWCEELDLSPMFGVNLGTRGMDDARRYLEYCCHPGGTELSERRRAHGVEPPHRIPLWCLGNEMDGPWQIGRKTPDEYGRLAQETAKLMRMLQPGIELAACGSSAFDMPTYGEWEDRVLSHCHDEVDFVSLHSYFVKPFAPDGVLPPGADTSTESFFAQIETNARYIEATVAIADAVAARRRSKKRLMLSFDEWNVWYRARHGHHLKQGGWPEAPRLLEEVYTVEDALLVGGMLCMLMNHADRVKVACLAQLVNVIAPIMTEPGGPAWRQTIFWPFALASRFGRGTVLRPSIASPTYPHVKEGELPYLVASVVWNEDDGTLAVFALNRHLAAPMDLAVALQGLGGDAGLALGEAWELHDLDLHATNTVDLPDRFQPRALGGICVDGDTLRATLRPASWNVIVLRPR

Samples

Sample ID Description Type Environment
1 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
37 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
56 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
57 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
60 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
63 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
66 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
67 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
71 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
80 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
81 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
82 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
83 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
92 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
93 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
94 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
95 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
96 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
97 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
100 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
111 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
112 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
113 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
114 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
115 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
116 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
117 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
118 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
119 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
124 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
127 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
128 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
129 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
130 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
131 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
132 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
139 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
140 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
141 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
151 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
152 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
157 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
158 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
159 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
160 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
161 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
162 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
163 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
164 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
167 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
168 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
169 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
170 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
171 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
172 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
173 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
174 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
175 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
176 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
177 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
180 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
181 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
182 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
183 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
184 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
185 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
186 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
187 2643221585 Pelomonas sp. Root662 Isolate Unclassified
188 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
189 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
190 2643221656 Pelomonas sp. Root405 Isolate Unclassified
191 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
192 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
193 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
194 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
195 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
196 2738541337 Pelomonas sp. BT06 Isolate Unclassified
197 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
198 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
199 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
200 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
201 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
202 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
203 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
204 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
205 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
206 2818991459 Paenibacillus sp. 597 Isolate Unclassified
207 2821443989 Inquilinus ginsengisoli 584 Isolate Unclassified
208 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
209 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
210 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
211 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
212 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
213 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
214 2886848708 Mitsuaria sp. TWR114 Isolate Rhizosphere
215 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
216 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
217 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
218 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
219 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
220 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
221 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
222 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
223 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
224 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
225 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
226 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
227 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
228 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
229 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
230 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
231 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
232 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.01
Metatranscriptomes 0
Isolates 17.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.71
Nodule 1.44
Rhizoplane 2.16
Rhizosphere 70.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055524_1000117 3300003775 Bacteria 93643
2 JGI25151J46595_10000834 3300003187 Bacteria 24587
3 rootL2_10004420 3300003322 Bacteria 15965
4 rootH1_10016862 3300003323 Bacteria 7469
5 rootH1_10100938 3300003323 Bacteria 10599
6 Ga0055525_1000013 3300003759 Bacteria 440870
7 Ga0055531_10000025 3300003794 Bacteria 161475
8 Ga0055531_10001270 3300003794 Bacteria 19088
9 Ga0070658_10011531 3300005327 Bacteria 7089
10 Ga0070683_100128670 3300005329 Bacteria 2395
11 Ga0070680_100104596 3300005336 Bacteria 2353
12 Ga0070661_100068847 3300005344 Bacteria 2601
13 Ga0070678_100045227 3300005456 Bacteria 3148
14 Ga0070681_10041440 3300005458 Bacteria 4615
15 Ga0070679_100134411 3300005530 Bacteria 2454
16 Ga0070684_100051523 3300005535 Bacteria 3576
17 Ga0068853_100011873 3300005539 Bacteria 7083
18 Ga0068855_100000047 3300005563 Bacteria 145355
19 Ga0070664_100104126 3300005564 Bacteria 2471
20 Ga0068856_100060411 3300005614 Bacteria 3745
21 Ga0068852_100036049 3300005616 Bacteria 4135
22 Ga0081540_1008527 3300005983 Bacteria 7154
23 Ga0081539_10000038 3300005985 Bacteria 296079
24 Ga0079104_1000001 3300006946 Bacteria 521847
25 Ga0105240_10000647 3300009093 Bacteria 64299
26 Ga0105240_10007195 3300009093 Bacteria 16207
27 Ga0105240_10009905 3300009093 Bacteria 13442
28 Ga0105240_10092822 3300009093 Bacteria 3685
29 Ga0114129_10160847 3300009147 Bacteria 3067
30 Ga0105243_10032269 3300009148 Bacteria 4045
31 Ga0105243_10053389 3300009148 Bacteria 3206
32 Ga0105237_10004390 3300009545 Bacteria 16354
33 Ga0105033_101728 3300009986 Bacteria 1798
34 Ga0105239_10001683 3300010375 Bacteria 29162
35 Ga0105239_10004893 3300010375 Bacteria 15848
36 Ga0105246_10003818 3300011119 Bacteria 9132
37 Ga0157319_1000026 3300012497 Bacteria 63349
38 Ga0157370_10003183 3300013104 Bacteria 19414
39 Ga0157369_10008018 3300013105 Bacteria 12125
40 Ga0157369_10049178 3300013105 Bacteria 4572
41 Ga0157369_10074778 3300013105 Bacteria 3633
42 Ga0157369_10164122 3300013105 Bacteria 2343
43 Ga0157374_10075772 3300013296 Bacteria 3179
44 Ga0209566_100174 3300025225 Bacteria 70319
45 Ga0209563_100025 3300025230 Bacteria 596456
46 Ga0209759_1003548 3300025256 Bacteria 6177
47 Ga0209050_1006788 3300025298 Bacteria 6670
48 Ga0209256_1000075 3300025299 Bacteria 236149
49 Ga0209257_1000032 3300025304 Bacteria 680354
50 Ga0209257_1000244 3300025304 Bacteria 126098
51 Ga0207705_10050926 3300025909 Bacteria 2981
52 Ga0207707_10061057 3300025912 Bacteria 3279
53 Ga0207695_10000003 3300025913 Bacteria 1368691
54 Ga0207695_10019604 3300025913 Bacteria 7782
55 Ga0207671_10001444 3300025914 Bacteria 27486
56 Ga0207660_10127127 3300025917 Bacteria 1937
57 Ga0207652_10066254 3300025921 Bacteria 3129
58 Ga0207694_10000011 3300025924 Bacteria 417640
59 Ga0207650_10096258 3300025925 Bacteria 2270
60 Ga0207706_10071748 3300025933 Bacteria 3046
61 Ga0207709_10033733 3300025935 Bacteria 3009
62 Ga0207661_10003702 3300025944 Bacteria 10652
63 Ga0207667_10000050 3300025949 Bacteria 234390
64 Ga0207639_10020022 3300026041 Bacteria 4784
65 Ga0207683_10125963 3300026121 Bacteria 2302
66 Ga0207698_10025811 3300026142 Bacteria 4147
67 Ga0207698_10078356 3300026142 Bacteria 2653
68 Ga0209281_1000057 3300027111 Bacteria 307145
69 Ga0265318_10000072 3300028577 Bacteria 96797
70 Ga0307517_10047133 3300028786 Bacteria 4476
71 Ga0307515_10018412 3300028794 Bacteria 12641
72 Ga0307515_10022909 3300028794 Bacteria 10983
73 Ga0307511_10061897 3300030521 Bacteria 2847
74 Ga0265340_10002183 3300031247 Bacteria 11202
75 Ga0265331_10006222 3300031250 Bacteria 7083
76 Ga0265327_10000636 3300031251 Bacteria 57230
77 Ga0265316_10060855 3300031344 Bacteria 2934
78 Ga0307513_10000223 3300031456 Bacteria 82016
79 Ga0307509_10000052 3300031507 Bacteria 164947
80 Ga0307408_100000726 3300031548 Bacteria 26703
81 Ga0307408_100012551 3300031548 Bacteria 5615
82 Ga0307408_100018997 3300031548 Bacteria 4622
83 Ga0307408_100028206 3300031548 Bacteria 3877
84 Ga0307508_10013754 3300031616 Bacteria 7389
85 Ga0307508_10053944 3300031616 Bacteria 3565
86 Ga0265314_10064094 3300031711 Bacteria 2490
87 Ga0265342_10004728 3300031712 Bacteria 10601
88 Ga0316576_10012682 3300031727 Bacteria 5575
89 Ga0307516_10009375 3300031730 Bacteria 10920
90 Ga0307410_10087288 3300031852 Bacteria 2206
91 Ga0307412_10165904 3300031911 Bacteria 1646
92 Ga0307409_100055936 3300031995 Bacteria 3049
93 Ga0307409_100218219 3300031995 Bacteria 1720
94 Ga0307416_100092267 3300032002 Bacteria 2604
95 Ga0307414_10018638 3300032004 Bacteria 4280
96 Ga0307411_10150594 3300032005 Bacteria 1728
97 Ga0307415_100114007 3300032126 Bacteria 2011
98 Ga0307507_10054231 3300033179 Bacteria 3818
99 Ga0373949_0000495 3300035090 Bacteria 13360
100 Ga0373939_0000095 3300035114 Bacteria 27743
101 Ga0373960_0000616 3300035121 Bacteria 7284
102 Ga0316574_0004217 3300035398 Bacteria 7499
103 Ga0373931_0001043 3300035691 Bacteria 11716
104 Ga0395899_0000007 3300037312 Bacteria 629129
105 Ga0395899_0006239 3300037312 Bacteria 9235
106 Ga0395900_0000026 3300037418 Bacteria 313470
107 Ga0395898_0000085 3300037466 Bacteria 240992
108 Ga0395898_0012696 3300037466 Bacteria 8702
109 Ga0395898_0123274 3300037466 Bacteria 2483
110 Ga0395905_0023705 3300037471 Bacteria 5795
111 Ga0395901_0138646 3300038443 Bacteria 2556
112 Ga0436361_0837961 3300039447 Bacteria 2712
113 Ga0439436_0005892 3300041404 Bacteria 3758
114 Ga0451853_2860929 3300041512 Bacteria 1745
115 Ga0439433_0008776 3300041999 Bacteria 2197
116 Ga0439462_0012049 3300042015 Bacteria 2206
117 Ga0450890_000794 3300042127 Bacteria 4551
118 Ga0450890_000816 3300042127 Bacteria 4496
119 Ga0450891_000741 3300042129 Bacteria 3411
120 Ga0450893_0001562 3300042532 Bacteria 3512
121 Ga0451577_0113890 3300042876 Bacteria 2421
122 Ga0466969_0001617 3300044656 Bacteria 12070
123 Ga0466969_0006140 3300044656 Bacteria 6396
124 Ga0466966_0000143 3300044684 Bacteria 45651
125 Ga0466966_0000492 3300044684 Bacteria 25352
126 Ga0466966_0076920 3300044684 Bacteria 2083
127 Ga0466961_0000301 3300044693 Bacteria 32898
128 Ga0466961_0000868 3300044693 Bacteria 18843
129 Ga0466961_0008137 3300044693 Bacteria 6678
130 Ga0466961_0013449 3300044693 Bacteria 5242
131 Ga0466964_0028627 3300044706 Bacteria 2196
132 Ga0453684_0014777 3300044712 Bacteria 12441
133 Ga0466971_0000632 3300044719 Bacteria 14039
134 Ga0466971_0001301 3300044719 Bacteria 10428
135 Ga0466971_0031167 3300044719 Bacteria 2387
136 Ga0466957_0013744 3300044842 Bacteria 4702
137 Ga0466959_0000511 3300045049 Bacteria 22572
138 Ga0466959_0004071 3300045049 Bacteria 9730
139 Ga0466959_0006643 3300045049 Bacteria 8036
140 Ga0466959_0041759 3300045049 Bacteria 3385
141 Ga0466959_0052622 3300045049 Bacteria 2981
142 Ga0451576_0000385 3300045051 Bacteria 103040
143 Ga0451576_0079820 3300045051 Bacteria 3405
144 Ga0466958_0000818 3300045836 Bacteria 13744
145 Ga0466958_0003818 3300045836 Bacteria 7868
146 Ga0466967_0009875 3300045976 Bacteria 7118
147 Ga0495591_003143 3300046458 Bacteria 8724
148 Ga0495638_0061925 3300046460 Bacteria 2310
149 Ga0495580_0013904 3300046472 Bacteria 6127
150 Ga0495664_0009074 3300046477 Bacteria 5560
151 Ga0495664_0050176 3300046477 Bacteria 2477
152 Ga0495596_0001769 3300046500 Bacteria 12094
153 Ga0495608_0004834 3300046511 Bacteria 9629
154 Ga0495628_0067798 3300046516 Bacteria 2785
155 Ga0495630_0010628 3300046517 Bacteria 6646
156 Ga0495666_0002451 3300046526 Bacteria 9211
157 Ga0495652_0018649 3300046529 Bacteria 6184
158 Ga0495640_0003474 3300046533 Bacteria 12686
159 Ga0495587_0002021 3300046536 Bacteria 13522
160 Ga0495645_0020534 3300046543 Bacteria 4768
161 Ga0495622_0000450 3300046557 Bacteria 26491
162 Ga0495667_0020282 3300046559 Bacteria 4486
163 Ga0495667_0025553 3300046559 Bacteria 3980
164 Ga0495635_0021367 3300046663 Bacteria 4510
165 Ga0495661_0004617 3300046665 Bacteria 9912
166 Ga0495599_0010594 3300046678 Bacteria 5643
167 Ga0495613_0112214 3300046689 Bacteria 1963
168 Ga0495624_0094257 3300046690 Bacteria 1845
169 Ga0495671_0021123 3300046692 Bacteria 3424
170 Ga0495649_0078855 3300046694 Bacteria 1762
171 Ga0495581_0009804 3300047315 Bacteria 5543
172 Ga0495604_0036816 3300047317 Bacteria 3856
173 Ga0495676_0040561 3300047321 Bacteria 3840
174 Ga0495683_0007197 3300047323 Bacteria 6038
175 Ga0495675_0000605 3300047444 Bacteria 23113
176 Ga0495675_0006836 3300047444 Bacteria 7001
177 Ga0495677_0010745 3300047445 Bacteria 3355
178 Ga0495679_002908 3300047446 Bacteria 8478
179 Ga0495686_0001150 3300047472 Bacteria 31074
180 Ga0495593_0001577 3300047673 Bacteria 13443
181 Ga0495614_0003703 3300048089 Bacteria 6862
182 Ga0496102_0001994 3300048905 Bacteria 17631
183 Ga0496102_0015125 3300048905 Bacteria 6719
184 Ga0496103_0030138 3300048906 Bacteria 3300
185 Ga0496108_0106430 3300048911 Bacteria 2395
186 Ga0496112_0089842 3300048915 Bacteria 3040
187 Ga0496114_0082376 3300048917 Bacteria 2720
188 Ga0496117_0002771 3300048920 Bacteria 21469
189 Ga0496118_0000553 3300048921 Bacteria 61663
190 Ga0496126_0023754 3300048929 Bacteria 5936
191 Ga0495682_0001113 3300049460 Bacteria 15638
192 Ga0501291_001288 3300049514 Bacteria 2900
193 Ga0501032_0000418 3300049569 Bacteria 35199
194 Ga0501034_0000057 3300049571 Bacteria 202455
195 Ga0501034_0000182 3300049571 Bacteria 117605
196 Ga0501034_0161782 3300049571 Bacteria 2209
197 Ga0501038_0055139 3300049574 Bacteria 3416
198 Ga0501046_0001017 3300049580 Bacteria 27341
199 Ga0501222_001211 3300049662 Bacteria 3639
200 Ga0501233_001167 3300049668 Bacteria 4466
201 Ga0501235_007362 3300049669 Bacteria 2398
202 Ga0501249_001837 3300049679 Bacteria 4323
203 Ga0501221_000655 3300049704 Bacteria 5557
204 Ga0501229_003668 3300049706 Bacteria 1843
205 Ga0501083_0089638 3300049744 Bacteria 2032
206 Ga0501267_001075 3300049764 Bacteria 2276
207 Ga0501269_004947 3300049766 Bacteria 1602
208 Ga0501035_0040272 3300049822 Bacteria 4224
209 nmdc:mga0k408_23811_c1 3300050493 Bacteria 3458
210 nmdc:mga07m45_11299_c1 3300050496 Bacteria 4688
211 Ga0495655_0005515 3300053083 Bacteria 2240
212 Ga0500647_0050660 3300053091 Bacteria 1997
213 Ga0500566_0001091 3300053094 Bacteria 15713
214 Ga0500566_0006243 3300053094 Bacteria 7082
215 Ga0500640_000103 3300053095 Bacteria 15259
216 Ga0500554_000024 3300053102 Bacteria 25354
217 Ga0500562_001283 3300053108 Bacteria 6203
218 Ga0500595_000059 3300053119 Bacteria 81487
219 Ga0500597_013772 3300053120 Bacteria 3012
220 Ga0500614_000695 3300053123 Bacteria 8624
221 Ga0500642_0026249 3300053130 Bacteria 2376
222 Ga0500559_0005857 3300053136 Bacteria 5601
223 Ga0500585_002615 3300053144 Bacteria 3941
224 Ga0500603_002117 3300053150 Bacteria 4398
225 Ga0500616_0000920 3300053153 Bacteria 32166
226 Ga0466962_0000809 3300061719 Bacteria 14128
227 Ga0466962_0004059 3300061719 Bacteria 7006
228 Ga0466962_0005972 3300061719 Bacteria 5849
229 2510247554 2510065045 Bacteria 7761063
230 2516023235 2515154189 Bacteria 9629850
231 2523470106 2523231067 Bacteria 5230452
232 2643744564 2643221544 Bacteria 5886209
233 2643934523 2643221585 Bacteria 5812563
234 2644219175 2643221639 Bacteria 6649903
235 2644255693 2643221646 Bacteria 6433402
236 2644316010 2643221656 Bacteria 5809961
237 2644505416 2643221690 Bacteria 4654705
238 2644524781 2643221694 Bacteria 4392972
239 2644668869 2643221722 Bacteria 4247614
240 2671694335 2671180139 Bacteria 4196045
241 2719638273 2718217991 Bacteria 7829542
242 2739054157 2738541337 Bacteria 6183410
243 2739350799 2738543031 Bacteria 5769731
244 2753565403 2751185846 Bacteria 7242164
245 2775655752 2775506735 Bacteria 4556596
246 2808828489 2808606357 Bacteria 4466944
247 2808849733 2808606360 Bacteria 4404006
248 2808877676 2808606366 Bacteria 4415912
249 2808892863 2808606370 Bacteria 4942454
250 2812319804 2811994871 Bacteria 4497550
251 2816423046 2816332119 Bacteria 8120218
252 2819671417 2818991459 Bacteria 8736032
253 2821448478 2821443989 Bacteria 7658172
254 2837183452 2837183177 Bacteria 4637169
255 2857365309 2857357740 Bacteria 9937880
256 2857741810 2857740372 Bacteria 4782044
257 2862993392 2862993130 Bacteria 3860849
258 2883093560 2883087390 Bacteria 9532701
259 2884996957 2884994152 Bacteria 4492978
260 2886849514 2886848708 Bacteria 5632523
261 2904497747 2904497146 Bacteria 4731781
262 2910812630 2910809715 Bacteria 4982797
263 2919038592 2919034639 Bacteria 4763403
264 2919062581 2919059106 Bacteria 4991624
265 2919394351 2919391150 Bacteria 4884741
266 2919539581 2919538618 Bacteria 4677069
267 2932431120 2932426870 Bacteria 4547726
268 2933419909 2933418574 Bacteria 4476724
269 2939602077 2939598168 Bacteria 4687164
270 2939647317 2939647034 Bacteria 4681660
271 2939676614 2939674588 Bacteria 4844420
272 2945917550 2945916053 Bacteria 4555517
273 2945922346 2945920336 Bacteria 4501603
274 2945960788 2945956166 Bacteria 5110334
275 2946037381 2946037020 Bacteria 4900426
276 2953998648 2953998280 Bacteria 4812144
277 2964328739 2964326757 Bacteria 3290868
278 8004022474 8004021418 Bacteria 4313954
279 Ga0055524_1000117
280 JGI25151J46595_10000834
281 rootL2_10004420
282 rootH1_10016862
283 rootH1_10100938
284 Ga0055525_1000013
285 Ga0055531_10000025
286 Ga0055531_10001270
287 Ga0070658_10011531
288 Ga0070683_100128670
289 Ga0070680_100104596
290 Ga0070661_100068847
291 Ga0070678_100045227
292 Ga0070681_10041440
293 Ga0070679_100134411
294 Ga0070684_100051523
295 Ga0068853_100011873
296 Ga0068855_100000047
297 Ga0070664_100104126
298 Ga0068856_100060411
299 Ga0068852_100036049
300 Ga0081540_1008527
301 Ga0081539_10000038
302 Ga0079104_1000001
303 Ga0105240_10000647
304 Ga0105240_10007195
305 Ga0105240_10009905
306 Ga0105240_10092822
307 Ga0114129_10160847
308 Ga0105243_10032269
309 Ga0105243_10053389
310 Ga0105237_10004390
311 Ga0105033_101728
312 Ga0105239_10001683
313 Ga0105239_10004893
314 Ga0105246_10003818
315 Ga0157319_1000026
316 Ga0157370_10003183
317 Ga0157369_10008018
318 Ga0157369_10049178
319 Ga0157369_10074778
320 Ga0157369_10164122
321 Ga0157374_10075772
322 Ga0209566_100174
323 Ga0209563_100025
324 Ga0209759_1003548
325 Ga0209050_1006788
326 Ga0209256_1000075
327 Ga0209257_1000032
328 Ga0209257_1000244
329 Ga0207705_10050926
330 Ga0207707_10061057
331 Ga0207695_10000003
332 Ga0207695_10019604
333 Ga0207671_10001444
334 Ga0207660_10127127
335 Ga0207652_10066254
336 Ga0207694_10000011
337 Ga0207650_10096258
338 Ga0207706_10071748
339 Ga0207709_10033733
340 Ga0207661_10003702
341 Ga0207667_10000050
342 Ga0207639_10020022
343 Ga0207683_10125963
344 Ga0207698_10025811
345 Ga0207698_10078356
346 Ga0209281_1000057
347 Ga0265318_10000072
348 Ga0307517_10047133
349 Ga0307515_10018412
350 Ga0307515_10022909
351 Ga0307511_10061897
352 Ga0265340_10002183
353 Ga0265331_10006222
354 Ga0265327_10000636
355 Ga0265316_10060855
356 Ga0307513_10000223
357 Ga0307509_10000052
358 Ga0307408_100000726
359 Ga0307408_100012551
360 Ga0307408_100018997
361 Ga0307408_100028206
362 Ga0307508_10013754
363 Ga0307508_10053944
364 Ga0265314_10064094
365 Ga0265342_10004728
366 Ga0316576_10012682
367 Ga0307516_10009375
368 Ga0307410_10087288
369 Ga0307412_10165904
370 Ga0307409_100055936
371 Ga0307409_100218219
372 Ga0307416_100092267
373 Ga0307414_10018638
374 Ga0307411_10150594
375 Ga0307415_100114007
376 Ga0307507_10054231
377 Ga0373949_0000495
378 Ga0373939_0000095
379 Ga0373960_0000616
380 Ga0316574_0004217
381 Ga0373931_0001043
382 Ga0395899_0000007
383 Ga0395899_0006239
384 Ga0395900_0000026
385 Ga0395898_0000085
386 Ga0395898_0012696
387 Ga0395898_0123274
388 Ga0395905_0023705
389 Ga0395901_0138646
390 Ga0436361_0837961
391 Ga0439436_0005892
392 Ga0451853_2860929
393 Ga0439433_0008776
394 Ga0439462_0012049
395 Ga0450890_000794
396 Ga0450890_000816
397 Ga0450891_000741
398 Ga0450893_0001562
399 Ga0451577_0113890
400 Ga0466969_0001617
401 Ga0466969_0006140
402 Ga0466966_0000143
403 Ga0466966_0000492
404 Ga0466966_0076920
405 Ga0466961_0000301
406 Ga0466961_0000868
407 Ga0466961_0008137
408 Ga0466961_0013449
409 Ga0466964_0028627
410 Ga0453684_0014777
411 Ga0466971_0000632
412 Ga0466971_0001301
413 Ga0466971_0031167
414 Ga0466957_0013744
415 Ga0466959_0000511
416 Ga0466959_0004071
417 Ga0466959_0006643
418 Ga0466959_0041759
419 Ga0466959_0052622
420 Ga0451576_0000385
421 Ga0451576_0079820
422 Ga0466958_0000818
423 Ga0466958_0003818
424 Ga0466967_0009875
425 Ga0495591_003143
426 Ga0495638_0061925
427 Ga0495580_0013904
428 Ga0495664_0009074
429 Ga0495664_0050176
430 Ga0495596_0001769
431 Ga0495608_0004834
432 Ga0495628_0067798
433 Ga0495630_0010628
434 Ga0495666_0002451
435 Ga0495652_0018649
436 Ga0495640_0003474
437 Ga0495587_0002021
438 Ga0495645_0020534
439 Ga0495622_0000450
440 Ga0495667_0020282
441 Ga0495667_0025553
442 Ga0495635_0021367
443 Ga0495661_0004617
444 Ga0495599_0010594
445 Ga0495613_0112214
446 Ga0495624_0094257
447 Ga0495671_0021123
448 Ga0495649_0078855
449 Ga0495581_0009804
450 Ga0495604_0036816
451 Ga0495676_0040561
452 Ga0495683_0007197
453 Ga0495675_0000605
454 Ga0495675_0006836
455 Ga0495677_0010745
456 Ga0495679_002908
457 Ga0495686_0001150
458 Ga0495593_0001577
459 Ga0495614_0003703
460 Ga0496102_0001994
461 Ga0496102_0015125
462 Ga0496103_0030138
463 Ga0496108_0106430
464 Ga0496112_0089842
465 Ga0496114_0082376
466 Ga0496117_0002771
467 Ga0496118_0000553
468 Ga0496126_0023754
469 Ga0495682_0001113
470 Ga0501291_001288
471 Ga0501032_0000418
472 Ga0501034_0000057
473 Ga0501034_0000182
474 Ga0501034_0161782
475 Ga0501038_0055139
476 Ga0501046_0001017
477 Ga0501222_001211
478 Ga0501233_001167
479 Ga0501235_007362
480 Ga0501249_001837
481 Ga0501221_000655
482 Ga0501229_003668
483 Ga0501083_0089638
484 Ga0501267_001075
485 Ga0501269_004947
486 Ga0501035_0040272
487 nmdc:mga0k408_23811_c1
488 nmdc:mga07m45_11299_c1
489 Ga0495655_0005515
490 Ga0500647_0050660
491 Ga0500566_0001091
492 Ga0500566_0006243
493 Ga0500640_000103
494 Ga0500554_000024
495 Ga0500562_001283
496 Ga0500595_000059
497 Ga0500597_013772
498 Ga0500614_000695
499 Ga0500642_0026249
500 Ga0500559_0005857
501 Ga0500585_002615
502 Ga0500603_002117
503 Ga0500616_0000920
504 Ga0466962_0000809
505 Ga0466962_0004059
506 Ga0466962_0005972
507 2510247554
508 2516023235
509 2523470106
510 2643744564
511 2643934523
512 2644219175
513 2644255693
514 2644316010
515 2644505416
516 2644524781
517 2644668869
518 2671694335
519 2719638273
520 2739054157
521 2739350799
522 2753565403
523 2775655752
524 2808828489
525 2808849733
526 2808877676
527 2808892863
528 2812319804
529 2816423046
530 2819671417
531 2821448478
532 2837183452
533 2857365309
534 2857741810
535 2862993392
536 2883093560
537 2884996957
538 2886849514
539 2904497747
540 2910812630
541 2919038592
542 2919062581
543 2919394351
544 2919539581
545 2932431120
546 2933419909
547 2939602077
548 2939647317
549 2939676614
550 2945917550
551 2945922346
552 2945960788
553 2946037381
554 2953998648
555 2964328739
556 8004022474

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06964

Alpha-L-AF_C

Alpha-L-arabinofuranosidase C-terminal domain

325

530

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1pz3-assembly1.cif.gz_A crystal structure of a family 51 (gh51) alpha-l-arabinofuranosidase from geobacillus stearothermophilus t6 0.9845 4 502
1pz2-assembly1.cif.gz_A crystal structure of a transient covalent reaction intermediate of a family 51 alpha-l-arabinofuranosidase 0.9834 4 502
1pz3-assembly1.cif.gz_A crystal structure of a family 51 (gh51) alpha-l-arabinofuranosidase from geobacillus stearothermophilus t6 0.9805 4 502
2c7f-assembly4.cif.gz_D the structure of a family 51 arabinofuranosidase, araf51, from clostridium thermocellum in complex with 1,5-alpha-l-arabinotriose. 0.9796 5 499
1pz2-assembly1.cif.gz_A crystal structure of a transient covalent reaction intermediate of a family 51 alpha-l-arabinofuranosidase 0.9795 4 502
ID Description Score Start End Superfamily
2y2wC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9599 19 381 3.20.20.80
3ug3C02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9546 19 381 3.20.20.80
2c7fE01 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9521 384 499 2.60.40.1180
3ug3C02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9464 19 381 3.20.20.80
2y2wC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.942 19 381 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A840B097-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.9929 1 503 GO:0000272
GO:0046373
GO:0046556
AF-A0A257JBE7-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.9918 195 388 GO:0000272
GO:0046373
GO:0046556
AF-A0A2W4Q145-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.9895 238 502 GO:0000272
GO:0046373
GO:0046556
AF-A0A840B097-F1-model_v4 non-reducing end alpha-L-arabinofuranosidase (EC 3.2.1.55) 0.989 1 503 GO:0000272
GO:0046373
GO:0046556
AF-A0A2V9Q1U9-F1-model_v4 Alpha-N-arabinofuranosidase 0.9884 17 129 GO:0000272

Map