F382277

General Info

Members Datasets Scaffolds Average Seq Length
278 173 276 261

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100117648|Ga0068856_1001176482
Length 294
Sequence MAQTHDRAAEILLTTRYSLPATFPTMVAANSQKTISVTIRVWRQASQNAPGKFVDYPAANLNSNMSFLEMLDVVNDGLTLKGEEPIAFAHDCREGICGTCSLTINGKPHGPGEGIATCQTYMRSFKDGDIIVVEPFRARAFPLVKDLVVDRSAFDKIQQAGGFITARTGSAPDANAILVPKADADLAMDAAACIGCGACVAACKNASAMLFVAAKVSHLGLLPQGQAERSQRVLAMVSKMDELGFGSCTNYYECSAACPKLISHDFIARMNRDYLKASFRMTFKPESAAAGGAS

Samples

Sample ID Description Type Environment
1 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
2 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
85 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
86 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
87 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
88 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
89 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
90 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
93 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
94 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
95 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
96 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
97 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
100 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
108 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
109 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
110 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
111 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
112 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
114 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
118 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
119 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
120 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
121 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
122 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
123 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
124 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
125 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
133 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
134 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
161 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
165 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
166 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
167 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
168 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
169 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
170 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
171 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0
Isolates 0.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.68
Nodule 0
Rhizoplane 0.72
Rhizosphere 90.65
Stem 0
Stem Tuber 0
Unclassified 3.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10002989 3300003320 Bacteria 18348
2 rootL2_10170721 3300003322 Bacteria 1698
3 Ga0070658_10083869 3300005327 Bacteria 2620
4 Ga0070676_10074047 3300005328 Unclassified 2050
5 Ga0070683_100003432 3300005329 Bacteria 12867
6 Ga0070683_100034262 3300005329 Bacteria 4637
7 Ga0070683_100044301 3300005329 Bacteria 4103
8 Ga0070683_100284524 3300005329 Bacteria 1573
9 Ga0070690_100085248 3300005330 Bacteria 2072
10 Ga0070677_10060951 3300005333 Bacteria 1556
11 Ga0068869_100000222 3300005334 Bacteria 29697
12 Ga0070666_10059009 3300005335 Bacteria 2595
13 Ga0068868_100002882 3300005338 Bacteria 11936
14 Ga0068868_100082973 3300005338 Bacteria 2572
15 Ga0068868_100140364 3300005338 Bacteria 1983
16 Ga0070689_100185544 3300005340 Bacteria 1691
17 Ga0070687_100122589 3300005343 Bacteria 1489
18 Ga0070692_10057362 3300005345 Bacteria 2042
19 Ga0070673_100091635 3300005364 Bacteria 2485
20 Ga0070688_100072951 3300005365 Bacteria 2201
21 Ga0070667_100030010 3300005367 Bacteria 4535
22 Ga0070701_10006367 3300005438 Bacteria 4964
23 Ga0070694_100034267 3300005444 Bacteria 3347
24 Ga0070708_100069635 3300005445 Bacteria 3164
25 Ga0070678_100444673 3300005456 Bacteria 1134
26 Ga0070681_10018122 3300005458 Bacteria 7040
27 Ga0068867_100002295 3300005459 Bacteria 13447
28 Ga0068867_100140098 3300005459 Bacteria 1890
29 Ga0070707_100861224 3300005468 Bacteria 870
30 Ga0070699_100243635 3300005518 Bacteria 1605
31 Ga0070699_100313008 3300005518 Bacteria 1410
32 Ga0070697_100100151 3300005536 Bacteria 2406
33 Ga0068853_100562147 3300005539 Bacteria 1081
34 Ga0070686_100001135 3300005544 Bacteria 15288
35 Ga0070665_100054444 3300005548 Bacteria 4012
36 Ga0070665_100434650 3300005548 Bacteria 1322
37 Ga0070704_100030816 3300005549 Bacteria 3598
38 Ga0070704_100074348 3300005549 Bacteria 2478
39 Ga0068855_100054010 3300005563 Bacteria 4725
40 Ga0068855_100146420 3300005563 Bacteria 2688
41 Ga0070664_100176562 3300005564 Bacteria 1897
42 Ga0068857_100163921 3300005577 Bacteria 2018
43 Ga0068856_100008050 3300005614 Bacteria 10291
44 Ga0068856_100117648 3300005614 Bacteria 2658
45 Ga0070702_100039029 3300005615 Bacteria 2648
46 Ga0068859_100000040 3300005617 Bacteria 162782
47 Ga0068859_100130815 3300005617 Unclassified 2581
48 Ga0068870_10222940 3300005840 Bacteria 1155
49 Ga0075368_10120293 3300006042 Bacteria 1087
50 Ga0097621_100026386 3300006237 Bacteria 4556
51 Ga0097621_100092351 3300006237 Bacteria 2535
52 Ga0068871_100037453 3300006358 Bacteria 3868
53 Ga0075431_100103918 3300006847 Bacteria 2932
54 Ga0075429_100384421 3300006880 Bacteria 1229
55 Ga0068865_100003302 3300006881 Bacteria 9655
56 Ga0097620_100000040 3300006931 Bacteria 162782
57 Ga0097620_100130816 3300006931 Unclassified 2581
58 Ga0114129_10564400 3300009147 Bacteria 1479
59 Ga0105237_10005648 3300009545 Bacteria 14082
60 Ga0105238_10000114 3300009551 Bacteria 89558
61 Ga0105249_10395399 3300009553 Bacteria 1411
62 Ga0157370_10051637 3300013104 Bacteria 3927
63 Ga0157369_10098650 3300013105 Bacteria 3114
64 Ga0157374_10032662 3300013296 Bacteria 4741
65 Ga0157378_10031385 3300013297 Bacteria 4694
66 Ga0163162_10118098 3300013306 Bacteria 2754
67 Ga0157375_10008556 3300013308 Bacteria 8960
68 Ga0157375_10417808 3300013308 Bacteria 1507
69 Ga0163163_10229675 3300014325 Archaea 1905
70 Ga0157379_10117170 3300014968 Bacteria 2396
71 Ga0213872_10128477 3300021361 Bacteria 1117
72 Ga0213871_10032960 3300021441 Bacteria 1360
73 Ga0209050_1031160 3300025298 Bacteria 1668
74 Ga0207688_10399158 3300025901 Bacteria 853
75 Ga0207645_10235033 3300025907 Bacteria 1210
76 Ga0207707_10015713 3300025912 Bacteria 6597
77 Ga0207695_10282683 3300025913 Bacteria 1553
78 Ga0207646_10313117 3300025922 Bacteria 1418
79 Ga0207694_10001129 3300025924 Bacteria 23095
80 Ga0207659_10209560 3300025926 Bacteria 1561
81 Ga0207659_10396609 3300025926 Bacteria 1153
82 Ga0207687_10062944 3300025927 Bacteria 2625
83 Ga0207700_10031367 3300025928 Bacteria 3774
84 Ga0207644_10019442 3300025931 Bacteria 4608
85 Ga0207670_10038914 3300025936 Bacteria 3110
86 Ga0207670_10197407 3300025936 Bacteria 1526
87 Ga0207704_10013309 3300025938 Bacteria 4114
88 Ga0207689_10000837 3300025942 Bacteria 29676
89 Ga0207661_10012141 3300025944 Bacteria 6255
90 Ga0207661_10065752 3300025944 Bacteria 2944
91 Ga0207661_10121825 3300025944 Bacteria 2221
92 Ga0207679_10165042 3300025945 Bacteria 1817
93 Ga0207667_10235994 3300025949 Bacteria 1872
94 Ga0207668_10708605 3300025972 Bacteria 885
95 Ga0207658_10048817 3300025986 Bacteria 3106
96 Ga0207702_10001251 3300026078 Bacteria 25641
97 Ga0207648_10016931 3300026089 Bacteria 6642
98 Ga0207648_10188372 3300026089 Bacteria 1828
99 Ga0207648_10191614 3300026089 Bacteria 1812
100 Ga0207648_10298140 3300026089 Bacteria 1445
101 Ga0207674_10010143 3300026116 Bacteria 10710
102 Ga0207674_10079840 3300026116 Bacteria 3275
103 Ga0207674_10333517 3300026116 Bacteria 1467
104 Ga0207683_10157281 3300026121 Bacteria 2053
105 Ga0268266_10096558 3300028379 Bacteria 2598
106 Ga0268266_10260217 3300028379 Bacteria 1608
107 Ga0265337_1001484 3300028556 Bacteria 11502
108 Ga0265337_1015793 3300028556 Bacteria 2459
109 Ga0265337_1031380 3300028556 Bacteria 1578
110 Ga0265337_1049883 3300028556 Bacteria 1181
111 Ga0265319_1002064 3300028563 Bacteria 11293
112 Ga0265319_1002361 3300028563 Bacteria 10377
113 Ga0265319_1004392 3300028563 Bacteria 6990
114 Ga0265319_1006325 3300028563 Bacteria 5501
115 Ga0265319_1035304 3300028563 Bacteria 1716
116 Ga0265319_1048604 3300028563 Bacteria 1408
117 Ga0265334_10017250 3300028573 Bacteria 2984
118 Ga0265318_10000902 3300028577 Bacteria 19351
119 Ga0265318_10001702 3300028577 Bacteria 12610
120 Ga0265318_10007365 3300028577 Bacteria 4979
121 Ga0265318_10022882 3300028577 Bacteria 2495
122 Ga0265318_10046974 3300028577 Bacteria 1629
123 Ga0265323_10009735 3300028653 Bacteria 3913
124 Ga0265322_10017164 3300028654 Bacteria 2086
125 Ga0265336_10000608 3300028666 Bacteria 19946
126 Ga0265336_10029832 3300028666 Bacteria 1700
127 Ga0265338_10000245 3300028800 Bacteria 99446
128 Ga0265338_10002571 3300028800 Bacteria 26831
129 Ga0265338_10004521 3300028800 Bacteria 18745
130 Ga0265338_10034331 3300028800 Bacteria 4905
131 Ga0265338_10160173 3300028800 Bacteria 1739
132 Ga0265338_10272653 3300028800 Bacteria 1239
133 Ga0265338_10402218 3300028800 Bacteria 976
134 Ga0265324_10000274 3300029957 Bacteria 38053
135 Ga0265324_10008819 3300029957 Bacteria 3975
136 Ga0265320_10001404 3300031240 Bacteria 17499
137 Ga0265320_10002416 3300031240 Bacteria 13013
138 Ga0265320_10002962 3300031240 Bacteria 11611
139 Ga0265320_10009935 3300031240 Bacteria 5696
140 Ga0265320_10011684 3300031240 Bacteria 5155
141 Ga0265320_10017722 3300031240 Bacteria 3945
142 Ga0265325_10004166 3300031241 Bacteria 9198
143 Ga0265340_10014870 3300031247 Bacteria 4052
144 Ga0265339_10063850 3300031249 Bacteria 1977
145 Ga0265331_10063951 3300031250 Bacteria 1732
146 Ga0265327_10001690 3300031251 Bacteria 26378
147 Ga0265327_10002641 3300031251 Bacteria 18474
148 Ga0265327_10014923 3300031251 Bacteria 5054
149 Ga0265327_10134036 3300031251 Bacteria 1163
150 Ga0265316_10038705 3300031344 Bacteria 3838
151 Ga0265316_10058878 3300031344 Bacteria 2990
152 Ga0265316_10095076 3300031344 Bacteria 2270
153 Ga0265316_10113329 3300031344 Bacteria 2052
154 Ga0265316_10257734 3300031344 Bacteria 1279
155 Ga0307408_100000003 3300031548 Bacteria 618438
156 Ga0265313_10001367 3300031595 Bacteria 22937
157 Ga0265313_10001513 3300031595 Bacteria 21656
158 Ga0265313_10003150 3300031595 Bacteria 13614
159 Ga0265313_10003392 3300031595 Bacteria 12933
160 Ga0265313_10003758 3300031595 Bacteria 12065
161 Ga0265313_10035804 3300031595 Bacteria 2496
162 Ga0307508_10000112 3300031616 Bacteria 95874
163 Ga0265314_10001297 3300031711 Bacteria 28333
164 Ga0265314_10001384 3300031711 Bacteria 27217
165 Ga0265314_10048235 3300031711 Bacteria 2990
166 Ga0265314_10053501 3300031711 Bacteria 2799
167 Ga0265314_10109756 3300031711 Bacteria 1755
168 Ga0265314_10155422 3300031711 Bacteria 1397
169 Ga0265342_10014361 3300031712 Bacteria 5260
170 Ga0265342_10061870 3300031712 Bacteria 2205
171 Ga0265342_10061917 3300031712 Bacteria 2203
172 Ga0265342_10072577 3300031712 Bacteria 2003
173 Ga0265342_10132603 3300031712 Bacteria 1394
174 Ga0316576_10003831 3300031727 Bacteria 8907
175 Ga0307410_10000037 3300031852 Bacteria 48189
176 Ga0307407_10040622 3300031903 Bacteria 2595
177 Ga0307407_10244175 3300031903 Bacteria 1227
178 Ga0307412_10057401 3300031911 Bacteria 2598
179 Ga0307409_100000026 3300031995 Bacteria 50903
180 Ga0307416_100000027 3300032002 Bacteria 172418
181 Ga0307416_100428394 3300032002 Bacteria 1369
182 Ga0373940_0044173 3300035088 Bacteria 1234
183 Ga0373923_0129160 3300035111 Bacteria 1134
184 Ga0373943_0032222 3300035170 Bacteria 2491
185 Ga0373935_0058941 3300035692 Bacteria 2453
186 Ga0373933_0013323 3300035724 Bacteria 4556
187 Ga0373937_0200170 3300036401 Bacteria 1877
188 Ga0400485_19110 3300038735 Bacteria 16368
189 Ga0400488_08535 3300038741 Bacteria 6341
190 Ga0400488_20339 3300038741 Bacteria 1867
191 Ga0400486_31626 3300038742 Bacteria 26816
192 Ga0400489_85455 3300039093 Bacteria 25057
193 Ga0436360_1239234 3300039438 Bacteria 6731
194 Ga0436361_0856597 3300039447 Bacteria 8613
195 Ga0436363_0968526 3300039450 Bacteria 893
196 Ga0436363_1158835 3300039450 Bacteria 1220
197 Ga0436362_0276331 3300039453 Bacteria 5112
198 Ga0439441_025951 3300042001 Bacteria 1109
199 Ga0451577_0101228 3300042876 Bacteria 2574
200 Ga0451577_0202832 3300042876 Bacteria 1790
201 Ga0453683_0000265 3300044673 Bacteria 68647
202 Ga0466966_0063346 3300044684 Bacteria 2330
203 Ga0466961_0025168 3300044693 Bacteria 3829
204 Ga0466961_0059990 3300044693 Bacteria 2419
205 Ga0466963_0080785 3300044694 Bacteria 2201
206 Ga0466963_0280611 3300044694 Bacteria 1171
207 Ga0466963_0419719 3300044694 Bacteria 943
208 Ga0453684_0090139 3300044712 Bacteria 3790
209 Ga0453684_0144165 3300044712 Bacteria 2840
210 Ga0453684_0716130 3300044712 Bacteria 1086
211 Ga0466957_0246950 3300044842 Bacteria 1186
212 Ga0466960_0022690 3300044901 Bacteria 2809
213 Ga0466960_0031956 3300044901 Bacteria 2432
214 Ga0466959_0035933 3300045049 Bacteria 3661
215 Ga0466959_0036293 3300045049 Bacteria 3642
216 Ga0451576_0003983 3300045051 Bacteria 19667
217 Ga0451576_0010356 3300045051 Bacteria 10704
218 Ga0451576_0023286 3300045051 Bacteria 6707
219 Ga0451576_0097684 3300045051 Bacteria 3054
220 Ga0451576_0213529 3300045051 Bacteria 2015
221 Ga0451576_1124313 3300045051 Bacteria 822
222 Ga0466958_0127929 3300045836 Bacteria 1593
223 Ga0466958_0173041 3300045836 Bacteria 1368
224 Ga0466967_0032590 3300045976 Bacteria 4401
225 Ga0466967_0079951 3300045976 Bacteria 2949
226 Ga0495608_0263497 3300046511 Bacteria 1072
227 Ga0495599_0341355 3300046678 Bacteria 899
228 Ga0495658_0020095 3300046683 Bacteria 3498
229 Ga0496104_0252864 3300048907 Bacteria 1675
230 Ga0496109_0271208 3300048912 Bacteria 1599
231 Ga0501033_0003521 3300049570 Bacteria 12816
232 Ga0501033_0144491 3300049570 Bacteria 1719
233 Ga0501034_0000338 3300049571 Bacteria 81772
234 Ga0501034_0356703 3300049571 Bacteria 1390
235 Ga0501036_0040388 3300049572 Bacteria 3946
236 Ga0501036_0125711 3300049572 Bacteria 2165
237 Ga0501037_0214145 3300049573 Bacteria 1357
238 Ga0501038_0022179 3300049574 Bacteria 5690
239 Ga0501038_0182390 3300049574 Bacteria 1693
240 Ga0501043_0177597 3300049579 Bacteria 1660
241 Ga0501043_0307370 3300049579 Bacteria 1210
242 Ga0501046_0003899 3300049580 Bacteria 13644
243 Ga0501046_0068885 3300049580 Bacteria 2753
244 Ga0501046_0272487 3300049580 Bacteria 1241
245 Ga0501046_0405295 3300049580 Bacteria 984
246 Ga0501047_0001236 3300049581 Bacteria 25296
247 Ga0501047_0202176 3300049581 Bacteria 1847
248 Ga0501048_0058430 3300049582 Bacteria 2733
249 Ga0501070_0218021 3300049586 Bacteria 1565
250 Ga0501070_0301501 3300049586 Bacteria 1305
251 Ga0501076_0436615 3300049592 Bacteria 1078
252 Ga0501243_001374 3300049675 Bacteria 3484
253 Ga0501080_0516690 3300049742 Bacteria 1066
254 Ga0501083_0006121 3300049744 Bacteria 8530
255 Ga0501083_0043465 3300049744 Bacteria 3044
256 Ga0501035_0035570 3300049822 Bacteria 4519
257 Ga0501044_0017664 3300049823 Bacteria 7651
258 Ga0501044_0056284 3300049823 Bacteria 4037
259 Ga0501044_0128566 3300049823 Bacteria 2529
260 Ga0501045_0090100 3300049824 Bacteria 2266
261 nmdc:mga03683_43258_c1 3300050489 Bacteria 1857
262 nmdc:mga06z11_62657_c1 3300050494 Bacteria 1943
263 nmdc:mga06r32_124498_c1 3300050510 Bacteria 2545
264 nmdc:mga06r32_179081_c1 3300050510 Bacteria 2105
265 nmdc:mga0a205_210366_c1 3300050515 Bacteria 1833
266 Ga0500644_0015559 3300053088 Bacteria 2173
267 Ga0500555_000025 3300053103 Bacteria 119960
268 Ga0500556_0114466 3300053104 Bacteria 1048
269 Ga0500642_0083677 3300053130 Bacteria 1468
270 Ga0500568_0003110 3300053139 Bacteria 9462
271 Ga0500622_0001403 3300053156 Bacteria 19417
272 Ga0500622_0008101 3300053156 Bacteria 5907
273 Ga0500584_114294 3300053726 Bacteria 1084
274 Ga0500611_014789 3300053727 Bacteria 1369
275 Ga0501082_0173689 3300060353 Bacteria 1874
276 Ga0466962_0208717 3300061719 Bacteria 955

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009147 Ga0114129_10564400 Ga0114129_105644002 236
2 3300044694 Ga0466963_0280611 Ga0466963_0280611_363_1136 236
3 3300045976 Ga0466967_0032590 Ga0466967_0032590_882_1655 236
4 3300046678 Ga0495599_0341355 Ga0495599_0341355_12_737 236
5 3300009545 Ga0105237_10005648 Ga0105237_100056484 237
6 3300044684 Ga0466966_0063346 Ga0466966_0063346_942_1718 237
7 3300044693 Ga0466961_0025168 Ga0466961_0025168_224_1000 237
8 3300045049 Ga0466959_0036293 Ga0466959_0036293_2797_3573 237
9 3300045836 Ga0466958_0127929 Ga0466958_0127929_179_955 237
10 3300045051 Ga0451576_1124313 Ga0451576_1124313_13_744 238
11 3300045976 Ga0466967_0079951 Ga0466967_0079951_1094_1849 239
12 3300031903 Ga0307407_10244175 Ga0307407_102441752 241
13 3300006880 Ga0075429_100384421 Ga0075429_1003844212 247
14 3300026089 Ga0207648_10188372 Ga0207648_101883721 247
15 3300044693 Ga0466961_0059990 Ga0466961_0059990_1648_2406 247
16 3300045049 Ga0466959_0035933 Ga0466959_0035933_1183_1941 247
17 3300045836 Ga0466958_0173041 Ga0466958_0173041_501_1277 247
18 iso_pu_bacteria 2515154137 2515755393 247
19 3300005458 Ga0070681_10018122 Ga0070681_100181222 248
20 3300005563 Ga0068855_100054010 Ga0068855_1000540102 248
21 3300005563 Ga0068855_100146420 Ga0068855_1001464202 248
22 3300006847 Ga0075431_100103918 Ga0075431_1001039182 248
23 3300025912 Ga0207707_10015713 Ga0207707_100157137 248
24 3300025949 Ga0207667_10235994 Ga0207667_102359942 248
25 3300026116 Ga0207674_10010143 Ga0207674_100101432 248
26 3300050510 nmdc:mga06r32_179081_c1 nmdc:mga06r32_179081_c1_845_1591 248
27 3300005328 Ga0070676_10074047 Ga0070676_100740472 249
28 3300005338 Ga0068868_100140364 Ga0068868_1001403642 249
29 3300005343 Ga0070687_100122589 Ga0070687_1001225892 249
30 3300005345 Ga0070692_10057362 Ga0070692_100573622 249
31 3300005444 Ga0070694_100034267 Ga0070694_1000342672 249
32 3300005549 Ga0070704_100074348 Ga0070704_1000743482 249
33 3300005564 Ga0070664_100176562 Ga0070664_1001765621 249
34 3300005577 Ga0068857_100163921 Ga0068857_1001639212 249
35 3300005617 Ga0068859_100130815 Ga0068859_1001308153 249
36 3300005840 Ga0068870_10222940 Ga0068870_102229402 249
37 3300006931 Ga0097620_100130816 Ga0097620_1001308163 249
38 3300009553 Ga0105249_10395399 Ga0105249_103953992 249
39 3300025907 Ga0207645_10235033 Ga0207645_102350332 249
40 3300025928 Ga0207700_10031367 Ga0207700_100313672 249
41 3300026116 Ga0207674_10333517 Ga0207674_103335172 249
42 3300028800 Ga0265338_10004521 Ga0265338_100045212 249
43 3300028800 Ga0265338_10272653 Ga0265338_102726532 249
44 3300036401 Ga0373937_0200170 Ga0373937_0200170_224_973 249
45 3300046511 Ga0495608_0263497 Ga0495608_0263497_41_790 249
46 3300005445 Ga0070708_100069635 Ga0070708_1000696355 250
47 3300005468 Ga0070707_100861224 Ga0070707_1008612241 250
48 3300005518 Ga0070699_100243635 Ga0070699_1002436352 250
49 3300005518 Ga0070699_100313008 Ga0070699_1003130082 250
50 3300005536 Ga0070697_100100151 Ga0070697_1001001512 250
51 3300025922 Ga0207646_10313117 Ga0207646_103131172 250
52 3300028800 Ga0265338_10034331 Ga0265338_100343312 250
53 3300032002 Ga0307416_100428394 Ga0307416_1004283942 250
54 3300039450 Ga0436363_0968526 Ga0436363_0968526_88_840 250
55 3300044712 Ga0453684_0144165 Ga0453684_0144165_1855_2607 250
56 3300044712 Ga0453684_0716130 Ga0453684_0716130_180_932 250
57 3300003322 rootL2_10170721 rootL2_101707212 251
58 3300005329 Ga0070683_100044301 Ga0070683_1000443013 251
59 3300005335 Ga0070666_10059009 Ga0070666_100590092 251
60 3300005364 Ga0070673_100091635 Ga0070673_1000916353 251
61 3300005367 Ga0070667_100030010 Ga0070667_1000300103 251
62 3300005456 Ga0070678_100444673 Ga0070678_1004446731 251
63 3300005548 Ga0070665_100054444 Ga0070665_1000544442 251
64 3300006237 Ga0097621_100092351 Ga0097621_1000923513 251
65 3300013296 Ga0157374_10032662 Ga0157374_100326622 251
66 3300013297 Ga0157378_10031385 Ga0157378_100313853 251
67 3300013306 Ga0163162_10118098 Ga0163162_101180983 251
68 3300013308 Ga0157375_10008556 Ga0157375_100085567 251
69 3300025926 Ga0207659_10396609 Ga0207659_103966092 251
70 3300025931 Ga0207644_10019442 Ga0207644_100194422 251
71 3300025944 Ga0207661_10065752 Ga0207661_100657522 251
72 3300025945 Ga0207679_10165042 Ga0207679_101650422 251
73 3300025986 Ga0207658_10048817 Ga0207658_100488173 251
74 3300026089 Ga0207648_10298140 Ga0207648_102981402 251
75 3300026121 Ga0207683_10157281 Ga0207683_101572812 251
76 3300028379 Ga0268266_10096558 Ga0268266_100965582 251
77 3300035170 Ga0373943_0032222 Ga0373943_0032222_46_801 251
78 3300053727 Ga0500611_014789 Ga0500611_014789_490_1245 251
79 3300005548 Ga0070665_100434650 Ga0070665_1004346502 252
80 3300013104 Ga0157370_10051637 Ga0157370_100516372 252
81 3300014968 Ga0157379_10117170 Ga0157379_101171702 252
82 3300025298 Ga0209050_1031160 Ga0209050_10311602 252
83 3300028379 Ga0268266_10260217 Ga0268266_102602172 252
84 3300049592 Ga0501076_0436615 Ga0501076_0436615_41_799 252
85 3300053088 Ga0500644_0015559 Ga0500644_0015559_1168_1938 252
86 3300053104 Ga0500556_0114466 Ga0500556_0114466_152_922 252
87 3300053156 Ga0500622_0001403 Ga0500622_0001403_12976_13746 252
88 3300005333 Ga0070677_10060951 Ga0070677_100609512 253
89 3300005338 Ga0068868_100082973 Ga0068868_1000829732 253
90 3300005438 Ga0070701_10006367 Ga0070701_100063672 253
91 3300005459 Ga0068867_100140098 Ga0068867_1001400982 253
92 3300005544 Ga0070686_100001135 Ga0070686_10000113517 253
93 3300005549 Ga0070704_100030816 Ga0070704_1000308163 253
94 3300005615 Ga0070702_100039029 Ga0070702_1000390292 253
95 3300006237 Ga0097621_100026386 Ga0097621_1000263863 253
96 3300013308 Ga0157375_10417808 Ga0157375_104178082 253
97 3300025913 Ga0207695_10282683 Ga0207695_102826832 253
98 3300025926 Ga0207659_10209560 Ga0207659_102095601 253
99 3300025927 Ga0207687_10062944 Ga0207687_100629442 253
100 3300025936 Ga0207670_10038914 Ga0207670_100389143 253
101 3300026089 Ga0207648_10191614 Ga0207648_101916141 253
102 3300028800 Ga0265338_10402218 Ga0265338_104022181 253
103 3300035088 Ga0373940_0044173 Ga0373940_0044173_415_1188 253
104 3300038741 Ga0400488_08535 Ga0400488_08535_4257_5018 253
105 3300039093 Ga0400489_85455 Ga0400489_85455_6518_7279 253
106 3300039450 Ga0436363_1158835 Ga0436363_1158835_270_1046 253
107 3300042876 Ga0451577_0101228 Ga0451577_0101228_147_920 253
108 3300044694 Ga0466963_0080785 Ga0466963_0080785_448_1224 253
109 3300044694 Ga0466963_0419719 Ga0466963_0419719_145_921 253
110 3300044842 Ga0466957_0246950 Ga0466957_0246950_48_824 253
111 3300044901 Ga0466960_0022690 Ga0466960_0022690_401_1177 253
112 3300044901 Ga0466960_0031956 Ga0466960_0031956_1441_2217 253
113 3300045051 Ga0451576_0023286 Ga0451576_0023286_1859_2635 253
114 3300045051 Ga0451576_0097684 Ga0451576_0097684_284_1057 253
115 3300046683 Ga0495658_0020095 Ga0495658_0020095_341_1114 253
116 3300049579 Ga0501043_0177597 Ga0501043_0177597_462_1238 253
117 3300053103 Ga0500555_000025 Ga0500555_000025_71610_72386 253
118 3300061719 Ga0466962_0208717 Ga0466962_0208717_126_902 253
119 3300005340 Ga0070689_100185544 Ga0070689_1001855442 254
120 3300005365 Ga0070688_100072951 Ga0070688_1000729511 254
121 3300025901 Ga0207688_10399158 Ga0207688_103991581 254
122 3300025936 Ga0207670_10197407 Ga0207670_101974071 254
123 3300025972 Ga0207668_10708605 Ga0207668_107086051 254
124 3300031727 Ga0316576_10003831 Ga0316576_100038318 254
125 3300038735 Ga0400485_19110 Ga0400485_19110_337_1101 254
126 3300038741 Ga0400488_20339 Ga0400488_20339_293_1057 254
127 3300038742 Ga0400486_31626 Ga0400486_31626_12603_13367 254
128 3300048912 Ga0496109_0271208 Ga0496109_0271208_578_1360 254
129 3300028653 Ga0265323_10009735 Ga0265323_100097354 255
130 3300035111 Ga0373923_0129160 Ga0373923_0129160_331_1113 255
131 3300035724 Ga0373933_0013323 Ga0373933_0013323_2842_3624 255
132 3300009551 Ga0105238_10000114 Ga0105238_1000011418 256
133 3300025924 Ga0207694_10001129 Ga0207694_1000112912 256
134 3300048907 Ga0496104_0252864 Ga0496104_0252864_270_1058 257
135 3300049571 Ga0501034_0000338 Ga0501034_0000338_28687_29472 257
136 3300049572 Ga0501036_0040388 Ga0501036_0040388_2112_2897 257
137 3300049574 Ga0501038_0182390 Ga0501038_0182390_438_1223 257
138 3300050515 nmdc:mga0a205_210366_c1 nmdc:mga0a205_210366_c1_860_1648 257
139 3300006042 Ga0075368_10120293 Ga0075368_101202932 258
140 3300028556 Ga0265337_1015793 Ga0265337_10157932 258
141 3300028577 Ga0265318_10022882 Ga0265318_100228822 258
142 3300028654 Ga0265322_10017164 Ga0265322_100171642 258
143 3300028666 Ga0265336_10000608 Ga0265336_100006085 258
144 3300028800 Ga0265338_10002571 Ga0265338_1000257125 258
145 3300029957 Ga0265324_10000274 Ga0265324_1000027427 258
146 3300031240 Ga0265320_10011684 Ga0265320_100116842 258
147 3300031249 Ga0265339_10063850 Ga0265339_100638502 258
148 3300031251 Ga0265327_10002641 Ga0265327_100026419 258
149 3300031344 Ga0265316_10038705 Ga0265316_100387052 258
150 3300031711 Ga0265314_10001297 Ga0265314_1000129713 258
151 3300049742 Ga0501080_0516690 Ga0501080_0516690_26_811 258
152 3300050489 nmdc:mga03683_43258_c1 nmdc:mga03683_43258_c1_738_1520 258
153 3300050494 nmdc:mga06z11_62657_c1 nmdc:mga06z11_62657_c1_966_1748 258
154 3300005617 Ga0068859_100000040 Ga0068859_10000004025 259
155 3300006931 Ga0097620_100000040 Ga0097620_10000004025 259
156 3300028556 Ga0265337_1031380 Ga0265337_10313801 259
157 3300028563 Ga0265319_1002361 Ga0265319_10023618 259
158 3300028563 Ga0265319_1004392 Ga0265319_10043924 259
159 3300028563 Ga0265319_1006325 Ga0265319_10063255 259
160 3300028563 Ga0265319_1035304 Ga0265319_10353041 259
161 3300028573 Ga0265334_10017250 Ga0265334_100172502 259
162 3300028577 Ga0265318_10000902 Ga0265318_1000090213 259
163 3300028577 Ga0265318_10001702 Ga0265318_100017024 259
164 3300028577 Ga0265318_10007365 Ga0265318_100073652 259
165 3300028800 Ga0265338_10000245 Ga0265338_1000024545 259
166 3300028800 Ga0265338_10160173 Ga0265338_101601731 259
167 3300029957 Ga0265324_10008819 Ga0265324_100088193 259
168 3300031240 Ga0265320_10001404 Ga0265320_100014049 259
169 3300031240 Ga0265320_10009935 Ga0265320_100099352 259
170 3300031240 Ga0265320_10017722 Ga0265320_100177223 259
171 3300031241 Ga0265325_10004166 Ga0265325_100041664 259
172 3300031247 Ga0265340_10014870 Ga0265340_100148704 259
173 3300031344 Ga0265316_10095076 Ga0265316_100950763 259
174 3300031344 Ga0265316_10113329 Ga0265316_101133292 259
175 3300031344 Ga0265316_10257734 Ga0265316_102577342 259
176 3300031595 Ga0265313_10001513 Ga0265313_1000151314 259
177 3300031595 Ga0265313_10003758 Ga0265313_100037583 259
178 3300031711 Ga0265314_10155422 Ga0265314_101554221 259
179 3300031712 Ga0265342_10061870 Ga0265342_100618704 259
180 3300031712 Ga0265342_10061917 Ga0265342_100619174 259
181 3300031712 Ga0265342_10072577 Ga0265342_100725771 259
182 3300050510 nmdc:mga06r32_124498_c1 nmdc:mga06r32_124498_c1_1170_1967 260
183 iso_pu_bacteria 2786546940 2788435479 261
184 3300049570 Ga0501033_0003521 Ga0501033_0003521_1312_2115 262
185 3300049571 Ga0501034_0356703 Ga0501034_0356703_238_1047 262
186 3300049572 Ga0501036_0125711 Ga0501036_0125711_214_1017 262
187 3300049573 Ga0501037_0214145 Ga0501037_0214145_357_1160 262
188 3300049574 Ga0501038_0022179 Ga0501038_0022179_513_1316 262
189 3300049579 Ga0501043_0307370 Ga0501043_0307370_216_1019 262
190 3300049580 Ga0501046_0068885 Ga0501046_0068885_1595_2398 262
191 3300049580 Ga0501046_0272487 Ga0501046_0272487_308_1117 262
192 3300049580 Ga0501046_0405295 Ga0501046_0405295_21_824 262
193 3300049581 Ga0501047_0202176 Ga0501047_0202176_216_1019 262
194 3300049582 Ga0501048_0058430 Ga0501048_0058430_1149_1952 262
195 3300049586 Ga0501070_0301501 Ga0501070_0301501_178_981 262
196 3300049823 Ga0501044_0056284 Ga0501044_0056284_935_1738 262
197 3300049823 Ga0501044_0128566 Ga0501044_0128566_1098_1907 262
198 3300049824 Ga0501045_0090100 Ga0501045_0090100_360_1163 262
199 3300060353 Ga0501082_0173689 Ga0501082_0173689_680_1483 262
200 3300005327 Ga0070658_10083869 Ga0070658_100838692 263
201 3300005329 Ga0070683_100003432 Ga0070683_10000343212 263
202 3300005329 Ga0070683_100034262 Ga0070683_1000342624 263
203 3300005614 Ga0068856_100117648 Ga0068856_1001176482 263
204 3300013105 Ga0157369_10098650 Ga0157369_100986504 263
205 3300021361 Ga0213872_10128477 Ga0213872_101284771 263
206 3300021441 Ga0213871_10032960 Ga0213871_100329601 263
207 3300025944 Ga0207661_10012141 Ga0207661_100121413 263
208 3300025944 Ga0207661_10121825 Ga0207661_101218252 263
209 3300028556 Ga0265337_1001484 Ga0265337_10014848 263
210 3300028563 Ga0265319_1002064 Ga0265319_10020644 263
211 3300028563 Ga0265319_1048604 Ga0265319_10486042 263
212 3300028577 Ga0265318_10046974 Ga0265318_100469742 263
213 3300031240 Ga0265320_10002416 Ga0265320_100024162 263
214 3300031240 Ga0265320_10002962 Ga0265320_1000296210 263
215 3300031251 Ga0265327_10134036 Ga0265327_101340362 263
216 3300031595 Ga0265313_10003150 Ga0265313_100031502 263
217 3300031595 Ga0265313_10003392 Ga0265313_100033928 263
218 3300031616 Ga0307508_10000112 Ga0307508_1000011216 263
219 3300031711 Ga0265314_10109756 Ga0265314_101097563 263
220 3300031712 Ga0265342_10014361 Ga0265342_100143613 263
221 3300035692 Ga0373935_0058941 Ga0373935_0058941_109_921 263
222 3300039438 Ga0436360_1239234 Ga0436360_1239234_3037_3909 263
223 3300039447 Ga0436361_0856597 Ga0436361_0856597_2440_3312 263
224 3300039453 Ga0436362_0276331 Ga0436362_0276331_601_1473 263
225 3300042001 Ga0439441_025951 Ga0439441_025951_34_843 263
226 3300044712 Ga0453684_0090139 Ga0453684_0090139_1146_1958 263
227 3300045051 Ga0451576_0003983 Ga0451576_0003983_2771_3583 263
228 3300045051 Ga0451576_0010356 Ga0451576_0010356_7122_7934 263
229 3300045051 Ga0451576_0213529 Ga0451576_0213529_14_823 263
230 3300049570 Ga0501033_0144491 Ga0501033_0144491_754_1563 263
231 3300049580 Ga0501046_0003899 Ga0501046_0003899_2679_3491 263
232 3300049581 Ga0501047_0001236 Ga0501047_0001236_5859_6671 263
233 3300049822 Ga0501035_0035570 Ga0501035_0035570_2140_2952 263
234 3300049823 Ga0501044_0017664 Ga0501044_0017664_893_1705 263
235 3300053130 Ga0500642_0083677 Ga0500642_0083677_89_922 263
236 3300053139 Ga0500568_0003110 Ga0500568_0003110_7479_8312 263
237 3300053156 Ga0500622_0008101 Ga0500622_0008101_1698_2531 263
238 3300053726 Ga0500584_114294 Ga0500584_114294_150_983 263
239 3300005329 Ga0070683_100284524 Ga0070683_1002845242 264
240 3300005334 Ga0068869_100000222 Ga0068869_1000002223 264
241 3300005338 Ga0068868_100002882 Ga0068868_1000028822 264
242 3300005459 Ga0068867_100002295 Ga0068867_1000022958 264
243 3300005539 Ga0068853_100562147 Ga0068853_1005621471 264
244 3300006358 Ga0068871_100037453 Ga0068871_1000374532 264
245 3300006881 Ga0068865_100003302 Ga0068865_1000033027 264
246 3300014325 Ga0163163_10229675 Ga0163163_102296751 264
247 3300025938 Ga0207704_10013309 Ga0207704_100133094 264
248 3300025942 Ga0207689_10000837 Ga0207689_100008373 264
249 3300026089 Ga0207648_10016931 Ga0207648_100169314 264
250 3300028556 Ga0265337_1049883 Ga0265337_10498832 264
251 3300031250 Ga0265331_10063951 Ga0265331_100639512 264
252 3300031251 Ga0265327_10001690 Ga0265327_100016902 264
253 3300031251 Ga0265327_10014923 Ga0265327_100149234 264
254 3300031344 Ga0265316_10058878 Ga0265316_100588783 264
255 3300031548 Ga0307408_100000003 Ga0307408_100000003412 264
256 3300031595 Ga0265313_10001367 Ga0265313_1000136715 264
257 3300031595 Ga0265313_10035804 Ga0265313_100358044 264
258 3300031711 Ga0265314_10001384 Ga0265314_1000138411 264
259 3300031711 Ga0265314_10048235 Ga0265314_100482353 264
260 3300031711 Ga0265314_10053501 Ga0265314_100535011 264
261 3300031712 Ga0265342_10132603 Ga0265342_101326032 264
262 3300031852 Ga0307410_10000037 Ga0307410_1000003749 264
263 3300031903 Ga0307407_10040622 Ga0307407_100406222 264
264 3300031911 Ga0307412_10057401 Ga0307412_100574012 264
265 3300031995 Ga0307409_100000026 Ga0307409_10000002614 264
266 3300032002 Ga0307416_100000027 Ga0307416_10000002751 264
267 3300042876 Ga0451577_0202832 Ga0451577_0202832_68_880 264
268 3300044673 Ga0453683_0000265 Ga0453683_0000265_53905_54774 264
269 3300049586 Ga0501070_0218021 Ga0501070_0218021_679_1494 264
270 3300049675 Ga0501243_001374 Ga0501243_001374_1485_2300 264
271 3300049744 Ga0501083_0006121 Ga0501083_0006121_2344_3159 264
272 3300049744 Ga0501083_0043465 Ga0501083_0043465_419_1234 264
273 3300003320 rootH2_10002989 rootH2_100029893 265
274 3300005330 Ga0070690_100085248 Ga0070690_1000852482 265
275 3300005614 Ga0068856_100008050 Ga0068856_1000080508 265
276 3300026078 Ga0207702_10001251 Ga0207702_1000125114 265
277 3300026116 Ga0207674_10079840 Ga0207674_100798403 265
278 3300028666 Ga0265336_10029832 Ga0265336_100298322 265

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13085

Fer2_3

2Fe-2S iron-sulfur cluster binding domain

38

156

0.9

PF00111

Fer2

2Fe-2S iron-sulfur cluster binding domain

71

123

0.81

PF13183

Fer4_8

4Fe-4S dicluster domain

189

262

0.6

PF12838

Fer4_7

4Fe-4S dicluster domain

192

262

0.59

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wp9-assembly3.cif.gz_J crystal structure of the e. coli succinate:quinone oxidoreductase (sqr) sdhb his207thr mutant 0.7292 10 251
2acz-assembly1.cif.gz_B complex ii (succinate dehydrogenase) from e. coli with atpenin a5 inhibitor co-crystallized at the ubiquinone binding site 0.7236 10 252
5c3j-assembly1.cif.gz_B crystal structure of mitochondrial rhodoquinol-fumarate reductase from ascaris suum with ubiquinone-1 0.7223 11 255
2wp9-assembly3.cif.gz_J crystal structure of the e. coli succinate:quinone oxidoreductase (sqr) sdhb his207thr mutant 0.7188 10 251
2acz-assembly1.cif.gz_B complex ii (succinate dehydrogenase) from e. coli with atpenin a5 inhibitor co-crystallized at the ubiquinone binding site 0.7157 10 252
ID Description Score Start End Superfamily
af_O53669_2_103_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.8357 9 125 3.10.20.30
af_O53669_2_103_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.8284 9 125 3.10.20.30
af_Q2FZC7_12_128_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.7664 1 125 3.10.20.30
af_Q2FZC7_12_128_3.10.20.30 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.7604 1 125 3.10.20.30
5xmjN01 Alpha Beta;Roll;Ubiquitin-like (UB roll);Beta-grasp domain 0.7598 9 125 3.10.20.30
ID Description Score Start End GO Terms
AF-A0A7W1CRU6-F1-model_v4 2Fe-2S iron-sulfur cluster binding domain-containing protein 0.9839 10 123 GO:0009055
GO:0009060
GO:0022904
GO:0051537
AF-A0A257V1R0-F1-model_v4 Succinate dehydogenase/fumarate reductase N-terminal domain-containing protein 0.9835 10 125 GO:0009055
GO:0009060
GO:0022904
GO:0051537
AF-A0A355CAS0-F1-model_v4 Succinate dehydrogenase/fumarate reductase iron-sulfur subunit 0.9769 8 62
AF-A0A849G0P9-F1-model_v4 2Fe-2S iron-sulfur cluster binding domain-containing protein 0.9755 10 105 GO:0009055
GO:0009060
GO:0022904
GO:0051537
AF-A0A7W1CRU6-F1-model_v4 2Fe-2S iron-sulfur cluster binding domain-containing protein 0.9754 10 123 GO:0009055
GO:0009060
GO:0022904
GO:0051537

Feature Viewer

pLDDT pTM Quality
87.46 0.82 High
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Predicted Structure (AlphaFold2)

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