F382452

General Info

Members Datasets Scaffolds Average Seq Length
278 155 556 704

Family's Representative Sequence

Representative Sequence 3300026078|Ga0207702_10028078|Ga0207702_100280783
Length 784
Sequence MRKNTSNKSKGKNKRFLFEEILKVLSKNSHSALNYKQIAAELGVQDHSERLLIMSILDDLKTKDIVTEPERGKFKIKSKQQVITGKVDMTGKGTAYITSDEMEEDIMVVPSKTLNALHGDMVKVRLLTKFGGRQEGEIIEIIERAKTDFVGVIQLSAKFAFLVPSSNKMHVDIYIPLEKLNGATNGQKAIARIVEWPKNGVNPIGEVIEVLGNVGENDTEMHAILAEYGLPYAFPDDVERVADLIPIEITKEEIAKRRDFRTITTFTIDPHDAKDFDDALSIQKLANGNWEIGVHIADVSHYIKPESILDKEAFSRATSVYLVDRVVPMLPEILSNNVCSLRPNEDKLCYSAVFEMTDEAELVDEWFGRTIINSNRRFTYEEAQMVIETEQGDFSDEILTLNRLAKILRANRFRKGSIAFEKMEIKFHLDEAGNPTGVYLKTVKDSNQLIEDFMLLANRKVAEFIGKAKDKKQPKRPFVYRIHDKPNPDKLASFAEFVSKFGYKLNFKSEKSTTDSINSLLKEVNQKKESGMIEMLAIRTMAKAIYTTKNIGHYGLGFEYYTHFTSPIRRYPDVMVHRLLQHYLDGGKNPDEEKLEEQCKHSSDMEKLAADAERASTKYKQVQFLMDKIGQEFDGVISGVTEWGIFVEVIENHCEGMVRIKELRDDNYYFDEDNYCLKGRRYGRVLTLGDTVRIEIKRADLSKKQLDFALVEMPVRTQERERKQKNAPPPQHKTVEPSVFVEREQKEEIKPLSKFHKEKKTIPKEKSKSSSTDPRFYDEWGFEI

Samples

Sample ID Description Type Environment
1 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
30 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
50 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
73 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
74 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
75 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
76 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
77 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
78 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
79 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
83 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
84 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
85 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
86 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
91 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
92 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
93 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
94 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
97 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
98 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
99 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
104 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
113 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
114 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
115 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
116 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
117 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
118 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
119 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
120 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
124 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
125 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
126 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
127 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
128 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
129 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
130 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
131 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
132 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
133 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
134 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
135 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
136 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
137 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
138 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
139 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
140 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
141 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
142 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
143 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
144 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
145 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
146 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
147 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
148 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
149 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
150 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
151 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
152 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
153 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
154 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
155 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.53
Metatranscriptomes 0
Isolates 6.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.96
Nodule 1.08
Rhizoplane 0.36
Rhizosphere 87.77
Stem 0
Stem Tuber 0
Unclassified 1.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207702_10028078 3300026078 Bacteria 4676
2 JGI24739J22299_10010326 3300001989 Bacteria 3467
3 JGI24735J21928_10005057 3300002067 Bacteria 4388
4 JGI25162J39368_1000024 3300002737 Bacteria 229507
5 rootH2_10002814 3300003320 Bacteria 49344
6 rootH1_10003212 3300003323 Bacteria 182359
7 Ga0070658_10000011 3300005327 Bacteria 294396
8 Ga0070676_10000402 3300005328 Bacteria 20188
9 Ga0068868_100009827 3300005338 Bacteria 6906
10 Ga0068868_100011412 3300005338 Bacteria 6470
11 Ga0070673_100008866 3300005364 Bacteria 6719
12 Ga0070659_100005866 3300005366 Bacteria 8849
13 Ga0070663_100001958 3300005455 Bacteria 11502
14 Ga0070678_100003561 3300005456 Bacteria 8685
15 Ga0070662_100000032 3300005457 Bacteria 78824
16 Ga0068867_100002216 3300005459 Bacteria 13639
17 Ga0070679_100005289 3300005530 Bacteria 11948
18 Ga0068853_100021760 3300005539 Bacteria 5350
19 Ga0068853_100029709 3300005539 Bacteria 4610
20 Ga0070672_100057498 3300005543 Bacteria 3053
21 Ga0070665_100000003 3300005548 Bacteria 811857
22 Ga0068855_100000206 3300005563 Bacteria 75521
23 Ga0068855_100002290 3300005563 Bacteria 23650
24 Ga0068855_100037148 3300005563 Bacteria 5794
25 Ga0068855_100143501 3300005563 Bacteria 2719
26 Ga0068857_100005946 3300005577 Bacteria 10422
27 Ga0068856_100000078 3300005614 Bacteria 93041
28 Ga0068856_100029647 3300005614 Bacteria 5345
29 Ga0068856_100039290 3300005614 Bacteria 4645
30 Ga0068852_100003528 3300005616 Bacteria 10943
31 Ga0068858_100068486 3300005842 Bacteria 3289
32 Ga0075366_10002863 3300006195 Bacteria 8945
33 Ga0097621_100000165 3300006237 Bacteria 41398
34 Ga0068871_100000018 3300006358 Bacteria 89690
35 Ga0068865_100000674 3300006881 Bacteria 19266
36 Ga0099824_1018638 3300006942 Bacteria 5634
37 Ga0079104_1000079 3300006946 Bacteria 141480
38 Ga0105240_10000039 3300009093 Bacteria 270117
39 Ga0105240_10005080 3300009093 Bacteria 19722
40 Ga0105240_10011349 3300009093 Bacteria 12410
41 Ga0105240_10121911 3300009093 Bacteria 3138
42 Ga0105241_10000398 3300009174 Bacteria 32826
43 Ga0105241_10004299 3300009174 Bacteria 10533
44 Ga0105241_10007920 3300009174 Bacteria 7812
45 Ga0105237_10000193 3300009545 Bacteria 86593
46 Ga0105237_10000717 3300009545 Bacteria 45892
47 Ga0105237_10001043 3300009545 Bacteria 37218
48 Ga0105237_10007821 3300009545 Bacteria 11653
49 Ga0105237_10011436 3300009545 Bacteria 9389
50 Ga0105238_10009608 3300009551 Bacteria 9677
51 Ga0105239_10000005 3300010375 Bacteria 496066
52 Ga0105239_10000010 3300010375 Bacteria 341545
53 Ga0105239_10000062 3300010375 Bacteria 153782
54 Ga0105239_10000415 3300010375 Bacteria 62156
55 Ga0105239_10001484 3300010375 Bacteria 31179
56 Ga0105239_10017895 3300010375 Bacteria 7838
57 Ga0105246_10013351 3300011119 Bacteria 5148
58 Ga0157373_10000205 3300013100 Bacteria 48796
59 Ga0157373_10011238 3300013100 Bacteria 6587
60 Ga0157371_10000216 3300013102 Bacteria 83975
61 Ga0157371_10008666 3300013102 Bacteria 8078
62 Ga0157370_10121619 3300013104 Bacteria 2437
63 Ga0157369_10007530 3300013105 Bacteria 12530
64 Ga0157374_10004834 3300013296 Bacteria 11307
65 Ga0157374_10010437 3300013296 Bacteria 7987
66 Ga0157374_10019533 3300013296 Bacteria 5999
67 Ga0157378_10006334 3300013297 Bacteria 10360
68 Ga0157378_10013111 3300013297 Bacteria 7252
69 Ga0163162_10000031 3300013306 Bacteria 157666
70 Ga0157372_10000010 3300013307 Bacteria 300658
71 Ga0157372_10001155 3300013307 Bacteria 28553
72 Ga0157372_10001904 3300013307 Bacteria 22644
73 Ga0157372_10003633 3300013307 Bacteria 16598
74 Ga0157375_10011828 3300013308 Bacteria 7716
75 Ga0157376_10080750 3300014969 Bacteria 2790
76 Ga0213872_10025187 3300021361 Bacteria 2735
77 Ga0209437_100017 3300025233 Bacteria 694471
78 Ga0209026_1000739 3300025250 Bacteria 18792
79 Ga0209026_1001023 3300025250 Bacteria 13763
80 Ga0209455_1007313 3300025272 Bacteria 3135
81 Ga0207647_10000104 3300025904 Bacteria 65696
82 Ga0207647_10001351 3300025904 Bacteria 18835
83 Ga0207645_10002518 3300025907 Bacteria 14349
84 Ga0207705_10000015 3300025909 Bacteria 382901
85 Ga0207654_10002369 3300025911 Bacteria 9644
86 Ga0207654_10004773 3300025911 Bacteria 6867
87 Ga0207707_10019440 3300025912 Bacteria 5930
88 Ga0207695_10000058 3300025913 Bacteria 366582
89 Ga0207695_10006156 3300025913 Bacteria 15640
90 Ga0207695_10007674 3300025913 Bacteria 13663
91 Ga0207695_10020927 3300025913 Bacteria 7476
92 Ga0207671_10000661 3300025914 Bacteria 44970
93 Ga0207671_10003097 3300025914 Bacteria 16932
94 Ga0207671_10003151 3300025914 Bacteria 16712
95 Ga0207671_10006500 3300025914 Bacteria 10397
96 Ga0207671_10009388 3300025914 Bacteria 8179
97 Ga0207671_10013912 3300025914 Bacteria 6387
98 Ga0207652_10004002 3300025921 Bacteria 12036
99 Ga0207690_10006703 3300025932 Bacteria 6823
100 Ga0207706_10000191 3300025933 Bacteria 68535
101 Ga0207669_10040901 3300025937 Bacteria 2693
102 Ga0207704_10000053 3300025938 Bacteria 79904
103 Ga0207667_10000009 3300025949 Bacteria 603135
104 Ga0207667_10002334 3300025949 Bacteria 23766
105 Ga0207667_10018790 3300025949 Bacteria 7738
106 Ga0207667_10030780 3300025949 Bacteria 5800
107 Ga0207667_10076570 3300025949 Bacteria 3471
108 Ga0207651_10004193 3300025960 Bacteria 7219
109 Ga0207640_10020706 3300025981 Bacteria 3909
110 Ga0207639_10029693 3300026041 Bacteria 4006
111 Ga0207702_10000418 3300026078 Bacteria 48592
112 Ga0207648_10000175 3300026089 Bacteria 66839
113 Ga0207674_10036735 3300026116 Bacteria 5100
114 Ga0207683_10008672 3300026121 Bacteria 8693
115 Ga0209281_1000045 3300027111 Bacteria 328124
116 Ga0268266_10000052 3300028379 Bacteria 296230
117 Ga0265337_1000005 3300028556 Bacteria 104147
118 Ga0265326_10000029 3300028558 Bacteria 97443
119 Ga0265319_1000056 3300028563 Bacteria 88093
120 Ga0265334_10000052 3300028573 Bacteria 85560
121 Ga0265323_10000142 3300028653 Bacteria 41662
122 Ga0265322_10000022 3300028654 Bacteria 102594
123 Ga0265336_10000073 3300028666 Bacteria 83573
124 Ga0307517_10002197 3300028786 Bacteria 31568
125 Ga0307515_10003945 3300028794 Bacteria 30959
126 Ga0307515_10021923 3300028794 Bacteria 11294
127 Ga0265338_10000348 3300028800 Bacteria 84143
128 Ga0265338_10002648 3300028800 Bacteria 26361
129 Ga0265324_10000033 3300029957 Bacteria 124454
130 Ga0316177_1032754 3300030731 Bacteria 20502
131 Ga0316176_1030119 3300030732 Bacteria 23258
132 Ga0265320_10000382 3300031240 Bacteria 35933
133 Ga0265327_10000991 3300031251 Bacteria 40424
134 Ga0265327_10001528 3300031251 Bacteria 28541
135 Ga0265316_10001189 3300031344 Bacteria 28185
136 Ga0265316_10008545 3300031344 Bacteria 9493
137 Ga0265316_10014759 3300031344 Bacteria 6857
138 Ga0307408_100000059 3300031548 Bacteria 134620
139 Ga0307408_100000283 3300031548 Bacteria 50603
140 Ga0265342_10017480 3300031712 Bacteria 4661
141 Ga0316576_10016800 3300031727 Bacteria 4957
142 Ga0316576_10077737 3300031727 Bacteria 2458
143 Ga0316576_10082119 3300031727 Bacteria 2392
144 Ga0316578_10009562 3300031728 Unclassified 4988
145 Ga0316578_10013340 3300031728 Bacteria 4357
146 Ga0307414_10026896 3300032004 Bacteria 3708
147 Ga0307411_10003426 3300032005 Bacteria 7353
148 Ga0307507_10000217 3300033179 Bacteria 109884
149 Ga0307510_10000328 3300033180 Bacteria 44214
150 Ga0316582_0015077 3300036647 Bacteria 4406
151 Ga0316584_0007080 3300036712 Bacteria 7642
152 Ga0316584_0022403 3300036712 Bacteria 4607
153 Ga0316584_0025659 3300036712 Bacteria 4324
154 Ga0395899_0000033 3300037312 Bacteria 306589
155 Ga0395899_0000672 3300037312 Bacteria 34623
156 Ga0395899_0000950 3300037312 Bacteria 27103
157 Ga0395900_0000014 3300037418 Bacteria 386513
158 Ga0395900_0001452 3300037418 Bacteria 28269
159 Ga0395900_0016148 3300037418 Bacteria 7606
160 Ga0395898_0004721 3300037466 Bacteria 14829
161 Ga0395905_0000001 3300037471 Bacteria 2037079
162 Ga0395905_0000037 3300037471 Bacteria 261808
163 Ga0395905_0000197 3300037471 Bacteria 94530
164 Ga0395905_0001347 3300037471 Bacteria 29914
165 Ga0395901_0000117 3300038443 Bacteria 105071
166 Ga0395901_0001159 3300038443 Bacteria 28002
167 Ga0400483_006213 3300039062 Bacteria 91642
168 Ga0400489_51042 3300039093 Bacteria 5052
169 Ga0436361_0389845 3300039447 Bacteria 11034
170 Ga0451855_1026320 3300041511 Bacteria 4320
171 Ga0451577_0000030 3300042876 Bacteria 391423
172 Ga0451577_0000072 3300042876 Bacteria 237934
173 Ga0451577_0001478 3300042876 Bacteria 31145
174 Ga0451577_0010247 3300042876 Bacteria 8976
175 Ga0451577_0017536 3300042876 Bacteria 6615
176 Ga0451577_0020524 3300042876 Bacteria 6062
177 Ga0451577_0021110 3300042876 Bacteria 5964
178 Ga0451577_0024195 3300042876 Bacteria 5527
179 Ga0451577_0043344 3300042876 Bacteria 4030
180 Ga0451577_0047318 3300042876 Bacteria 3846
181 Ga0451577_0077480 3300042876 Bacteria 2964
182 Ga0453683_0000136 3300044673 Bacteria 107540
183 Ga0453683_0000214 3300044673 Bacteria 77233
184 Ga0453683_0000224 3300044673 Bacteria 75668
185 Ga0453683_0000476 3300044673 Bacteria 46055
186 Ga0453683_0004852 3300044673 Bacteria 9453
187 Ga0453683_0009760 3300044673 Bacteria 6399
188 Ga0453683_0032553 3300044673 Unclassified 3289
189 Ga0453683_0053231 3300044673 Bacteria 2533
190 Ga0453683_0065499 3300044673 Bacteria 2271
191 Ga0453684_0000186 3300044712 Bacteria 273302
192 Ga0453684_0000337 3300044712 Bacteria 195296
193 Ga0453684_0000461 3300044712 Bacteria 162371
194 Ga0453684_0000570 3300044712 Bacteria 137760
195 Ga0453684_0000666 3300044712 Bacteria 122914
196 Ga0453684_0000766 3300044712 Bacteria 111429
197 Ga0453684_0000995 3300044712 Bacteria 92458
198 Ga0453684_0001329 3300044712 Bacteria 72798
199 Ga0453684_0003527 3300044712 Bacteria 34994
200 Ga0453684_0005508 3300044712 Bacteria 24986
201 Ga0453684_0005639 3300044712 Bacteria 24612
202 Ga0453684_0005857 3300044712 Bacteria 23891
203 Ga0453684_0008313 3300044712 Bacteria 18683
204 Ga0453684_0017480 3300044712 Bacteria 11106
205 Ga0453684_0031558 3300044712 Bacteria 7444
206 Ga0453684_0043672 3300044712 Bacteria 6020
207 Ga0453684_0053202 3300044712 Bacteria 5286
208 Ga0453684_0055416 3300044712 Bacteria 5154
209 Ga0453684_0068522 3300044712 Bacteria 4505
210 Ga0453684_0084902 3300044712 Bacteria 3936
211 Ga0453684_0087720 3300044712 Bacteria 3855
212 Ga0453684_0150945 3300044712 Bacteria 2761
213 Ga0453684_0250090 3300044712 Unclassified 2036
214 Ga0466959_0040008 3300045049 Bacteria 3465
215 Ga0451576_0000065 3300045051 Bacteria 274445
216 Ga0451576_0000095 3300045051 Bacteria 223485
217 Ga0451576_0000172 3300045051 Bacteria 162376
218 Ga0451576_0000683 3300045051 Bacteria 69004
219 Ga0451576_0000729 3300045051 Bacteria 66020
220 Ga0451576_0000918 3300045051 Bacteria 55785
221 Ga0451576_0001164 3300045051 Bacteria 47423
222 Ga0451576_0003202 3300045051 Bacteria 22830
223 Ga0451576_0003535 3300045051 Bacteria 21319
224 Ga0451576_0019999 3300045051 Bacteria 7297
225 Ga0451576_0240578 3300045051 Bacteria 1891
226 Ga0495650_0000138 3300046471 Bacteria 171220
227 Ga0495585_0000330 3300046492 Bacteria 46311
228 Ga0495585_0000539 3300046492 Bacteria 35812
229 Ga0495606_0000002 3300046507 Bacteria 554637
230 Ga0495610_0000307 3300046512 Bacteria 51754
231 Ga0495616_0001874 3300046513 Bacteria 14211
232 Ga0495616_0012147 3300046513 Bacteria 4901
233 Ga0495631_0018704 3300046518 Bacteria 3258
234 Ga0495648_0006646 3300046524 Bacteria 9365
235 Ga0495609_0014757 3300046538 Bacteria 3668
236 Ga0495633_0000014 3300046558 Bacteria 261742
237 Ga0495633_0008357 3300046558 Bacteria 5843
238 Ga0495668_0000003 3300046616 Bacteria 695023
239 Ga0495625_0000005 3300046660 Bacteria 596135
240 Ga0495625_0003136 3300046660 Bacteria 16877
241 Ga0495625_0005507 3300046660 Bacteria 11513
242 Ga0495625_0015179 3300046660 Bacteria 6113
243 Ga0495661_0001480 3300046665 Bacteria 19628
244 Ga0495661_0030475 3300046665 Bacteria 3435
245 Ga0495649_0000003 3300046694 Bacteria 880817
246 Ga0495683_0033746 3300047323 Bacteria 2603
247 Ga0495687_001935 3300047443 Bacteria 17748
248 Ga0495687_003772 3300047443 Bacteria 10708
249 Ga0495686_0000160 3300047472 Bacteria 128437
250 Ga0495686_0041993 3300047472 Bacteria 2910
251 Ga0501223_000281 3300049663 Bacteria 12789
252 Ga0501249_000032 3300049679 Bacteria 73488
253 Ga0501241_000122 3300049758 Bacteria 16826
254 nmdc:mga0k408_972_c1 3300050493 Bacteria 15742
255 Ga0500635_0001359 3300053080 Bacteria 5862
256 Ga0500556_0002518 3300053104 Bacteria 5829
257 Ga0500608_002885 3300053122 Bacteria 6361
258 Ga0500618_000003 3300053125 Bacteria 338706
259 Ga0500616_0000039 3300053153 Bacteria 383915
260 Ga0500622_0000558 3300053156 Bacteria 34124
261 2599477374 2599185184 Bacteria 6430550
262 2644641447 2643221716 Bacteria 4986332
263 2722730410 2721755487 Bacteria 6357185
264 2738698712 2738541273 Bacteria 4048577
265 2739253038 2738543014 Bacteria 4048139
266 2852623716 2852623160 Bacteria 4376875
267 2884937379 2884933994 Bacteria 4535041
268 2890738064 2890737413 Bacteria 4269751
269 2896318634 2896317667 Bacteria 4606601
270 2896346346 2896344016 Bacteria 3811746
271 2898713940 2898713307 Bacteria 4110805
272 2919441294 2919437846 Bacteria 6199444
273 2919684241 2919683626 Bacteria 5534354
274 2928079289 2928078545 Bacteria 6534839
275 2928148339 2928147474 Bacteria 6512076
276 2932084128 2932082852 Bacteria 6563563
277 2965321181 2965320100 Bacteria 3975600
278 3003235727 3003233435 Bacteria 4458031
279 Ga0207702_10028078
280 JGI24739J22299_10010326
281 JGI24735J21928_10005057
282 JGI25162J39368_1000024
283 rootH2_10002814
284 rootH1_10003212
285 Ga0070658_10000011
286 Ga0070676_10000402
287 Ga0068868_100009827
288 Ga0068868_100011412
289 Ga0070673_100008866
290 Ga0070659_100005866
291 Ga0070663_100001958
292 Ga0070678_100003561
293 Ga0070662_100000032
294 Ga0068867_100002216
295 Ga0070679_100005289
296 Ga0068853_100021760
297 Ga0068853_100029709
298 Ga0070672_100057498
299 Ga0070665_100000003
300 Ga0068855_100000206
301 Ga0068855_100002290
302 Ga0068855_100037148
303 Ga0068855_100143501
304 Ga0068857_100005946
305 Ga0068856_100000078
306 Ga0068856_100029647
307 Ga0068856_100039290
308 Ga0068852_100003528
309 Ga0068858_100068486
310 Ga0075366_10002863
311 Ga0097621_100000165
312 Ga0068871_100000018
313 Ga0068865_100000674
314 Ga0099824_1018638
315 Ga0079104_1000079
316 Ga0105240_10000039
317 Ga0105240_10005080
318 Ga0105240_10011349
319 Ga0105240_10121911
320 Ga0105241_10000398
321 Ga0105241_10004299
322 Ga0105241_10007920
323 Ga0105237_10000193
324 Ga0105237_10000717
325 Ga0105237_10001043
326 Ga0105237_10007821
327 Ga0105237_10011436
328 Ga0105238_10009608
329 Ga0105239_10000005
330 Ga0105239_10000010
331 Ga0105239_10000062
332 Ga0105239_10000415
333 Ga0105239_10001484
334 Ga0105239_10017895
335 Ga0105246_10013351
336 Ga0157373_10000205
337 Ga0157373_10011238
338 Ga0157371_10000216
339 Ga0157371_10008666
340 Ga0157370_10121619
341 Ga0157369_10007530
342 Ga0157374_10004834
343 Ga0157374_10010437
344 Ga0157374_10019533
345 Ga0157378_10006334
346 Ga0157378_10013111
347 Ga0163162_10000031
348 Ga0157372_10000010
349 Ga0157372_10001155
350 Ga0157372_10001904
351 Ga0157372_10003633
352 Ga0157375_10011828
353 Ga0157376_10080750
354 Ga0213872_10025187
355 Ga0209437_100017
356 Ga0209026_1000739
357 Ga0209026_1001023
358 Ga0209455_1007313
359 Ga0207647_10000104
360 Ga0207647_10001351
361 Ga0207645_10002518
362 Ga0207705_10000015
363 Ga0207654_10002369
364 Ga0207654_10004773
365 Ga0207707_10019440
366 Ga0207695_10000058
367 Ga0207695_10006156
368 Ga0207695_10007674
369 Ga0207695_10020927
370 Ga0207671_10000661
371 Ga0207671_10003097
372 Ga0207671_10003151
373 Ga0207671_10006500
374 Ga0207671_10009388
375 Ga0207671_10013912
376 Ga0207652_10004002
377 Ga0207690_10006703
378 Ga0207706_10000191
379 Ga0207669_10040901
380 Ga0207704_10000053
381 Ga0207667_10000009
382 Ga0207667_10002334
383 Ga0207667_10018790
384 Ga0207667_10030780
385 Ga0207667_10076570
386 Ga0207651_10004193
387 Ga0207640_10020706
388 Ga0207639_10029693
389 Ga0207702_10000418
390 Ga0207648_10000175
391 Ga0207674_10036735
392 Ga0207683_10008672
393 Ga0209281_1000045
394 Ga0268266_10000052
395 Ga0265337_1000005
396 Ga0265326_10000029
397 Ga0265319_1000056
398 Ga0265334_10000052
399 Ga0265323_10000142
400 Ga0265322_10000022
401 Ga0265336_10000073
402 Ga0307517_10002197
403 Ga0307515_10003945
404 Ga0307515_10021923
405 Ga0265338_10000348
406 Ga0265338_10002648
407 Ga0265324_10000033
408 Ga0316177_1032754
409 Ga0316176_1030119
410 Ga0265320_10000382
411 Ga0265327_10000991
412 Ga0265327_10001528
413 Ga0265316_10001189
414 Ga0265316_10008545
415 Ga0265316_10014759
416 Ga0307408_100000059
417 Ga0307408_100000283
418 Ga0265342_10017480
419 Ga0316576_10016800
420 Ga0316576_10077737
421 Ga0316576_10082119
422 Ga0316578_10009562
423 Ga0316578_10013340
424 Ga0307414_10026896
425 Ga0307411_10003426
426 Ga0307507_10000217
427 Ga0307510_10000328
428 Ga0316582_0015077
429 Ga0316584_0007080
430 Ga0316584_0022403
431 Ga0316584_0025659
432 Ga0395899_0000033
433 Ga0395899_0000672
434 Ga0395899_0000950
435 Ga0395900_0000014
436 Ga0395900_0001452
437 Ga0395900_0016148
438 Ga0395898_0004721
439 Ga0395905_0000001
440 Ga0395905_0000037
441 Ga0395905_0000197
442 Ga0395905_0001347
443 Ga0395901_0000117
444 Ga0395901_0001159
445 Ga0400483_006213
446 Ga0400489_51042
447 Ga0436361_0389845
448 Ga0451855_1026320
449 Ga0451577_0000030
450 Ga0451577_0000072
451 Ga0451577_0001478
452 Ga0451577_0010247
453 Ga0451577_0017536
454 Ga0451577_0020524
455 Ga0451577_0021110
456 Ga0451577_0024195
457 Ga0451577_0043344
458 Ga0451577_0047318
459 Ga0451577_0077480
460 Ga0453683_0000136
461 Ga0453683_0000214
462 Ga0453683_0000224
463 Ga0453683_0000476
464 Ga0453683_0004852
465 Ga0453683_0009760
466 Ga0453683_0032553
467 Ga0453683_0053231
468 Ga0453683_0065499
469 Ga0453684_0000186
470 Ga0453684_0000337
471 Ga0453684_0000461
472 Ga0453684_0000570
473 Ga0453684_0000666
474 Ga0453684_0000766
475 Ga0453684_0000995
476 Ga0453684_0001329
477 Ga0453684_0003527
478 Ga0453684_0005508
479 Ga0453684_0005639
480 Ga0453684_0005857
481 Ga0453684_0008313
482 Ga0453684_0017480
483 Ga0453684_0031558
484 Ga0453684_0043672
485 Ga0453684_0053202
486 Ga0453684_0055416
487 Ga0453684_0068522
488 Ga0453684_0084902
489 Ga0453684_0087720
490 Ga0453684_0150945
491 Ga0453684_0250090
492 Ga0466959_0040008
493 Ga0451576_0000065
494 Ga0451576_0000095
495 Ga0451576_0000172
496 Ga0451576_0000683
497 Ga0451576_0000729
498 Ga0451576_0000918
499 Ga0451576_0001164
500 Ga0451576_0003202
501 Ga0451576_0003535
502 Ga0451576_0019999
503 Ga0451576_0240578
504 Ga0495650_0000138
505 Ga0495585_0000330
506 Ga0495585_0000539
507 Ga0495606_0000002
508 Ga0495610_0000307
509 Ga0495616_0001874
510 Ga0495616_0012147
511 Ga0495631_0018704
512 Ga0495648_0006646
513 Ga0495609_0014757
514 Ga0495633_0000014
515 Ga0495633_0008357
516 Ga0495668_0000003
517 Ga0495625_0000005
518 Ga0495625_0003136
519 Ga0495625_0005507
520 Ga0495625_0015179
521 Ga0495661_0001480
522 Ga0495661_0030475
523 Ga0495649_0000003
524 Ga0495683_0033746
525 Ga0495687_001935
526 Ga0495687_003772
527 Ga0495686_0000160
528 Ga0495686_0041993
529 Ga0501223_000281
530 Ga0501249_000032
531 Ga0501241_000122
532 nmdc:mga0k408_972_c1
533 Ga0500635_0001359
534 Ga0500556_0002518
535 Ga0500608_002885
536 Ga0500618_000003
537 Ga0500616_0000039
538 Ga0500622_0000558
539 2599477374
540 2644641447
541 2722730410
542 2738698712
543 2739253038
544 2852623716
545 2884937379
546 2890738064
547 2896318634
548 2896346346
549 2898713940
550 2919441294
551 2919684241
552 2928079289
553 2928148339
554 2932084128
555 2965321181
556 3003235727

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08206

OB_RNB

Ribonuclease B OB domain

85

141

0.97

PF00575

S1

S1 RNA binding domain

626

710

0.96

PF17876

CSD2

Cold shock domain

161

235

0.96

PF00773

RNB

RNB domain

257

586

0.93

PF17849

OB_Dis3

Dis3-like cold-shock domain 2 (CSD2)

159

229

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1go3-assembly2.cif.gz_M structure of an archeal homolog of the eukaryotic rna polymerase ii rpb4/rpb7 complex 0.8959 595 678
4v8s-assembly2.cif.gz_BE archaeal rnap-dna binary complex at 4.32ang 0.8896 595 678
5xgu-assembly2.cif.gz_B escherichia coli. rnase r 0.8876 83 677
7dcy-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8866 81 677
1go3-assembly1.cif.gz_E structure of an archeal homolog of the eukaryotic rna polymerase ii rpb4/rpb7 complex 0.8859 595 678
ID Description Score Start End Superfamily
af_Q2G024_632_738_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9887 597 677 2.40.50.140
af_P21499_645_754_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9606 597 678 2.40.50.140
af_Q2G024_134_206_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9378 127 199 2.40.50.140
af_Q2G024_134_206_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9257 127 199 2.40.50.140
af_Q9QY24_7_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9029 10 74 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A353A0V9-F1-model_v4 Ribonuclease R 0.9912 583 679 GO:0003676
AF-K1U6G9-F1-model_v4 Exoribonuclease R 0.987 595 679 GO:0003676
AF-A0A3D4V2A7-F1-model_v4 Ribonuclease R 0.9788 528 678 GO:0003723
GO:0004540
GO:0005829
GO:0006402
AF-A0A3D5NQB1-F1-model_v4 Ribonuclease R 0.9771 596 678 GO:0003676
AF-A0A3D4V2A7-F1-model_v4 Ribonuclease R 0.9725 528 678 GO:0003723
GO:0004540
GO:0005829
GO:0006402

Map