F382928

General Info

Members Datasets Scaffolds Average Seq Length
279 184 242 631

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100000374|Ga0068855_10000037463
Length 669
Sequence MTAEIGQLALVQSASGLIGVRSPGAASVASGAATGLFVFVALAFGALTYAFVTSDFSVLDVANNSHTLKPLIYKITGVWGNHEGSMLLWVLVLAVYSAAIAFLGRGGVKLTAAALGVQGLLAFAFILFILFTSNPFLRLDPPPFEGAGLNPLLQDPGLAFHPPTLYIGYVGFSATFSYAAAALITGDSDAGWARAARPFMLIAWIALTLGIAGGSWWAYYTLGWGGFWFWDPVENASLMPWLIGTALLHSALATERTGAFRSWTLLLAIAAFSLSLIGTFLVRSGVLSSVHAFANDPARGVFILGMIGAAVLGALGLFAWRAPKLEGGTSFEPVSRETALLLNNVFLAAVTTAVFVGTLFPLFYRALTGRDLSVGPPYYALTFAPIFLGLLVLVPFGPRLAWRRGDLKEAARTLMPATLAAIAAVFIVLSIVAPRMLLGVGAFVAVAWLVGMGCVRMARRSLWGIVVAAFFVVTSIAAIAMFARSTPHTFFAMGARSRRRSVFAPAAIAAILAHAGLGITLMGIAGTTLWRSEALQVLGPNESMTIDGYTLRLHGVYRVDGPNYQAARALIEVRENDRVIAAMAPEKRLYPAEQQDTTDTAIRSTGFSDLYVALGDERDGGKWVIRAYVNPLAPFIWAGAGVMALGGLAGLWGRLRIMFAPRLVPQAAE

Samples

Sample ID Description Type Environment
1 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
2 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
3 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
4 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
5 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
6 2617270735 Bradyrhizobium shewense ERR11 Isolate Nodule
7 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
8 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
9 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
10 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
11 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
12 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
13 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
14 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
15 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
16 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
17 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
18 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
19 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
20 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
21 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
22 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
23 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
24 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
25 2935837841 Bradyrhizobium sp. RT4b Isolate Nodule
26 2935873716 Bradyrhizobium sp. RT9b Isolate Nodule
27 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
28 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
29 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
30 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
31 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
32 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
33 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
34 2941538514 Bradyrhizobium sp. RT11b Isolate Nodule
35 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
36 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
37 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
38 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
39 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
40 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
41 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
42 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
43 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
44 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
45 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
46 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
47 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
48 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
49 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
50 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
51 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
52 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
53 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
54 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
55 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
56 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
57 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
58 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
59 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
60 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
61 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
62 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
63 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
64 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
66 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
67 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
68 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
72 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
76 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
84 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
85 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
114 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
115 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
119 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
120 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
121 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
122 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
123 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
124 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
125 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
126 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
135 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
136 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
140 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
141 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
142 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
143 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
144 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
145 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
148 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
149 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
150 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
151 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
175 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
176 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
177 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
178 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
179 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
183 8019619141 Bradyrhizobium sp. GM7.3 Isolate Nodule
184 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.74
Metatranscriptomes 0
Isolates 13.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.94
Nodule 12.19
Rhizoplane 0
Rhizosphere 77.42
Stem 0
Stem Tuber 0
Unclassified 6.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000017 3300003214 Bacteria 377013
2 JGI25153J46596_10000755 3300003215 Bacteria 19791
3 rootH2_10149955 3300003320 Bacteria 3816
4 Ga0070658_10010049 3300005327 Bacteria 7601
5 Ga0070658_10017748 3300005327 Bacteria 5692
6 Ga0070683_100098574 3300005329 Bacteria 2750
7 Ga0068869_100003248 3300005334 Bacteria 9934
8 Ga0068869_100035279 3300005334 Bacteria 3544
9 Ga0070666_10000613 3300005335 Bacteria 21473
10 Ga0070680_100000505 3300005336 Bacteria 26838
11 Ga0070680_100070233 3300005336 Bacteria 2877
12 Ga0068868_100068631 3300005338 Bacteria 2823
13 Ga0070660_100054939 3300005339 Bacteria 3076
14 Ga0070661_100000160 3300005344 Bacteria 55287
15 Ga0070671_100014945 3300005355 Bacteria 6271
16 Ga0070667_100019990 3300005367 Bacteria 5558
17 Ga0070709_10001001 3300005434 Bacteria 15591
18 Ga0070714_100000304 3300005435 Bacteria 37363
19 Ga0070714_100017553 3300005435 Bacteria 5800
20 Ga0070713_100000262 3300005436 Bacteria 34628
21 Ga0070681_10000003 3300005458 Bacteria 252785
22 Ga0070681_10132506 3300005458 Bacteria 2424
23 Ga0068867_100008785 3300005459 Bacteria 7134
24 Ga0070698_100006045 3300005471 Bacteria 13183
25 Ga0070679_100000063 3300005530 Bacteria 79786
26 Ga0070679_100001255 3300005530 Bacteria 22375
27 Ga0070679_100038524 3300005530 Bacteria 4753
28 Ga0068853_100006769 3300005539 Bacteria 9133
29 Ga0068853_100030550 3300005539 Bacteria 4552
30 Ga0068853_100108148 3300005539 Bacteria 2466
31 Ga0070665_100001553 3300005548 Bacteria 26522
32 Ga0070665_100048874 3300005548 Bacteria 4246
33 Ga0070665_100075948 3300005548 Bacteria 3367
34 Ga0070665_100136987 3300005548 Bacteria 2451
35 Ga0068855_100000374 3300005563 Bacteria 55329
36 Ga0068855_100041363 3300005563 Bacteria 5462
37 Ga0068855_100166596 3300005563 Bacteria 2497
38 Ga0068855_100211284 3300005563 Bacteria 2180
39 Ga0068856_100003455 3300005614 Bacteria 15973
40 Ga0068852_100073754 3300005616 Bacteria 3003
41 Ga0068864_100027689 3300005618 Bacteria 4788
42 Ga0068858_100024238 3300005842 Bacteria 5654
43 Ga0068858_100025465 3300005842 Bacteria 5504
44 Ga0068862_100032457 3300005844 Bacteria 4412
45 Ga0070712_100000171 3300006175 Bacteria 35631
46 Ga0097621_100002762 3300006237 Bacteria 12003
47 Ga0097621_100018600 3300006237 Bacteria 5312
48 Ga0075370_10027663 3300006353 Bacteria 3148
49 Ga0068871_100001266 3300006358 Bacteria 16909
50 Ga0068871_100067383 3300006358 Bacteria 2936
51 Ga0075436_100001738 3300006914 Bacteria 14913
52 Ga0075435_100022161 3300007076 Bacteria 4898
53 Ga0075435_100042065 3300007076 Bacteria 3654
54 Ga0105240_10002036 3300009093 Bacteria 33289
55 Ga0105240_10011216 3300009093 Bacteria 12499
56 Ga0105240_10024181 3300009093 Bacteria 8017
57 Ga0105240_10033827 3300009093 Bacteria 6600
58 Ga0105240_10123752 3300009093 Bacteria 3111
59 Ga0105245_10044300 3300009098 Bacteria 3971
60 Ga0105245_10057383 3300009098 Bacteria 3502
61 Ga0105241_10011011 3300009174 Bacteria 6633
62 Ga0105241_10026306 3300009174 Bacteria 4328
63 Ga0105248_10000001 3300009177 Bacteria 1881304
64 Ga0105248_10027643 3300009177 Bacteria 6318
65 Ga0105237_10086818 3300009545 Bacteria 3118
66 Ga0105237_10088195 3300009545 Bacteria 3092
67 Ga0105238_10042091 3300009551 Bacteria 4625
68 Ga0105239_10007363 3300010375 Bacteria 12640
69 Ga0105239_10009987 3300010375 Bacteria 10653
70 Ga0105239_10027109 3300010375 Bacteria 6307
71 Ga0157369_10011936 3300013105 Bacteria 9868
72 Ga0163162_10011726 3300013306 Bacteria 8547
73 Ga0157372_10072411 3300013307 Bacteria 3884
74 Ga0157375_10023268 3300013308 Bacteria 5714
75 Ga0163163_10000004 3300014325 Bacteria 416569
76 Ga0163163_10024311 3300014325 Bacteria 5765
77 Ga0157379_10000489 3300014968 Bacteria 32177
78 Ga0157379_10007333 3300014968 Bacteria 9542
79 Ga0157376_10013814 3300014969 Bacteria 6037
80 Ga0213874_10000374 3300021377 Bacteria 8851
81 Ga0213874_10001457 3300021377 Bacteria 4902
82 Ga0213876_10000370 3300021384 Bacteria 38179
83 Ga0213876_10009242 3300021384 Bacteria 5309
84 Ga0209233_1000006 3300025261 Bacteria 1473685
85 Ga0209233_1001660 3300025261 Bacteria 8669
86 Ga0209758_1000008 3300025297 Bacteria 1215263
87 Ga0207680_10001841 3300025903 Bacteria 9972
88 Ga0207699_10000246 3300025906 Bacteria 30425
89 Ga0207643_10007728 3300025908 Bacteria 5776
90 Ga0207705_10006123 3300025909 Bacteria 8951
91 Ga0207707_10000001 3300025912 Bacteria 1212482
92 Ga0207707_10004780 3300025912 Bacteria 11881
93 Ga0207695_10000004 3300025913 Bacteria 1288665
94 Ga0207695_10024291 3300025913 Bacteria 6823
95 Ga0207695_10024334 3300025913 Bacteria 6816
96 Ga0207695_10050841 3300025913 Bacteria 4357
97 Ga0207695_10053382 3300025913 Bacteria 4228
98 Ga0207693_10000556 3300025915 Bacteria 33738
99 Ga0207660_10000081 3300025917 Bacteria 50936
100 Ga0207660_10083583 3300025917 Bacteria 2351
101 Ga0207657_10044127 3300025919 Bacteria 3921
102 Ga0207649_10000029 3300025920 Bacteria 156557
103 Ga0207652_10000413 3300025921 Bacteria 44358
104 Ga0207652_10008950 3300025921 Bacteria 8068
105 Ga0207652_10043292 3300025921 Bacteria 3834
106 Ga0207694_10000044 3300025924 Bacteria 169595
107 Ga0207650_10107800 3300025925 Bacteria 2152
108 Ga0207700_10000005 3300025928 Bacteria 394836
109 Ga0207664_10017517 3300025929 Bacteria 5255
110 Ga0207711_10000001 3300025941 Bacteria 1325674
111 Ga0207711_10015114 3300025941 Bacteria 6410
112 Ga0207689_10022410 3300025942 Bacteria 5311
113 Ga0207667_10000012 3300025949 Bacteria 445492
114 Ga0207667_10017998 3300025949 Bacteria 7935
115 Ga0207667_10030167 3300025949 Bacteria 5868
116 Ga0207667_10117183 3300025949 Bacteria 2745
117 Ga0207658_10027083 3300025986 Bacteria 4025
118 Ga0207677_10069925 3300026023 Bacteria 2471
119 Ga0207703_10042273 3300026035 Bacteria 3655
120 Ga0207639_10004819 3300026041 Bacteria 9099
121 Ga0207702_10000055 3300026078 Bacteria 136325
122 Ga0207648_10015315 3300026089 Bacteria 7057
123 Ga0207648_10135918 3300026089 Bacteria 2165
124 Ga0207683_10002290 3300026121 Bacteria 16792
125 Ga0207698_10011287 3300026142 Bacteria 5784
126 Ga0207698_10047721 3300026142 Bacteria 3247
127 Ga0209389_1000124 3300027296 Bacteria 68552
128 Ga0209489_113224 3300027361 Bacteria 6837
129 Ga0209700_100205 3300027363 Bacteria 97882
130 Ga0268266_10028476 3300028379 Bacteria 4747
131 Ga0268266_10037985 3300028379 Bacteria 4100
132 Ga0268266_10047609 3300028379 Bacteria 3674
133 Ga0268265_10022706 3300028380 Bacteria 4413
134 Ga0265318_10000017 3300028577 Bacteria 174748
135 Ga0265338_10000006 3300028800 Bacteria 570804
136 Ga0265338_10072419 3300028800 Bacteria 2942
137 Ga0265320_10000155 3300031240 Bacteria 57130
138 Ga0265325_10000003 3300031241 Bacteria 370490
139 Ga0265325_10000083 3300031241 Bacteria 66086
140 Ga0265325_10018067 3300031241 Bacteria 3912
141 Ga0265339_10002825 3300031249 Bacteria 12323
142 Ga0265339_10006390 3300031249 Bacteria 7745
143 Ga0265339_10007893 3300031249 Bacteria 6829
144 Ga0265339_10015969 3300031249 Bacteria 4487
145 Ga0265331_10000006 3300031250 Bacteria 418907
146 Ga0265331_10001232 3300031250 Bacteria 19232
147 Ga0265331_10002603 3300031250 Bacteria 12132
148 Ga0265327_10000808 3300031251 Bacteria 47626
149 Ga0265313_10001127 3300031595 Bacteria 25532
150 Ga0265313_10002245 3300031595 Bacteria 16985
151 Ga0265313_10034516 3300031595 Bacteria 2557
152 Ga0265314_10003386 3300031711 Bacteria 15455
153 Ga0265314_10043677 3300031711 Bacteria 3184
154 Ga0265314_10046186 3300031711 Bacteria 3074
155 Ga0265314_10054327 3300031711 Bacteria 2772
156 Ga0307516_10013763 3300031730 Bacteria 8592
157 Ga0373943_0004687 3300035170 Bacteria 6186
158 Ga0373937_0001725 3300036401 Bacteria 18379
159 Ga0395899_0006437 3300037312 Bacteria 9097
160 Ga0395900_0006114 3300037418 Bacteria 12555
161 Ga0395900_0006457 3300037418 Bacteria 12221
162 Ga0395898_0013431 3300037466 Bacteria 8434
163 Ga0395898_0020257 3300037466 Bacteria 6757
164 Ga0395901_0006230 3300038443 Bacteria 12092
165 Ga0395901_0074734 3300038443 Bacteria 3535
166 Ga0400483_063180 3300039062 Bacteria 3536
167 Ga0436365_0261841 3300039437 Bacteria 3181
168 Ga0436365_1599291 3300039437 Bacteria 30297
169 Ga0436363_1011852 3300039450 Bacteria 10891
170 Ga0436363_1377394 3300039450 Bacteria 13484
171 Ga0453684_0000015 3300044712 Bacteria 969198
172 Ga0453684_0001736 3300044712 Bacteria 58364
173 Ga0466967_0010809 3300045976 Bacteria 6869
174 Ga0466967_0042471 3300045976 Bacteria 3929
175 Ga0495651_0003468 3300046462 Bacteria 12086
176 Ga0495653_0001172 3300046463 Bacteria 20251
177 Ga0495580_0007123 3300046472 Bacteria 9005
178 Ga0495608_0000272 3300046511 Bacteria 36948
179 Ga0495587_0007014 3300046536 Bacteria 7315
180 Ga0495587_0027632 3300046536 Bacteria 3455
181 Ga0495622_0001189 3300046557 Bacteria 13441
182 Ga0495667_0004758 3300046559 Bacteria 9182
183 Ga0495625_0067729 3300046660 Bacteria 2512
184 Ga0495657_0003634 3300046675 Bacteria 12522
185 Ga0495623_0002245 3300046679 Bacteria 12867
186 Ga0495658_0000143 3300046683 Bacteria 39833
187 Ga0495604_0004436 3300047317 Bacteria 11115
188 Ga0495680_0001508 3300047322 Bacteria 24960
189 Ga0495675_0000362 3300047444 Bacteria 31645
190 Ga0495602_0019874 3300048088 Bacteria 6652
191 Ga0496126_0001787 3300048929 Bacteria 31720
192 Ga0496126_0046983 3300048929 Bacteria 3954
193 Ga0495682_0000969 3300049460 Bacteria 17275
194 Ga0501032_0012725 3300049569 Bacteria 6000
195 Ga0501033_0005663 3300049570 Bacteria 9863
196 Ga0501033_0007260 3300049570 Bacteria 8644
197 Ga0501033_0012574 3300049570 Bacteria 6458
198 Ga0501033_0053651 3300049570 Bacteria 2985
199 Ga0501034_0072714 3300049571 Bacteria 3447
200 Ga0501036_0011669 3300049572 Bacteria 7281
201 Ga0501036_0030021 3300049572 Bacteria 4594
202 Ga0501036_0030029 3300049572 Bacteria 4593
203 Ga0501036_0101810 3300049572 Bacteria 2430
204 Ga0501038_0067324 3300049574 Bacteria 3047
205 Ga0501039_0001645 3300049575 Bacteria 16475
206 Ga0501043_0020932 3300049579 Bacteria 5129
207 Ga0501046_0005559 3300049580 Bacteria 11262
208 Ga0501047_0004801 3300049581 Bacteria 12721
209 Ga0501047_0011081 3300049581 Bacteria 8532
210 Ga0501047_0025627 3300049581 Bacteria 5670
211 Ga0501047_0058283 3300049581 Bacteria 3731
212 Ga0501047_0104199 3300049581 Bacteria 2717
213 Ga0501067_0003712 3300049583 Bacteria 8415
214 Ga0501070_0008640 3300049586 Bacteria 8608
215 Ga0501070_0025377 3300049586 Bacteria 4971
216 Ga0501072_0001154 3300049588 Bacteria 19642
217 Ga0501073_0024098 3300049589 Bacteria 4370
218 Ga0501073_0064282 3300049589 Bacteria 2558
219 Ga0501073_0101168 3300049589 Bacteria 2001
220 Ga0501079_0053479 3300049741 Bacteria 3115
221 Ga0501080_0015134 3300049742 Bacteria 7108
222 Ga0501080_0018727 3300049742 Bacteria 6407
223 Ga0501083_0045026 3300049744 Bacteria 2986
224 Ga0501035_0005517 3300049822 Bacteria 11954
225 Ga0501035_0008521 3300049822 Bacteria 9545
226 Ga0501035_0027213 3300049822 Bacteria 5227
227 Ga0501035_0028784 3300049822 Bacteria 5070
228 Ga0501044_0004520 3300049823 Bacteria 15559
229 Ga0501044_0020615 3300049823 Bacteria 7038
230 Ga0501044_0023569 3300049823 Bacteria 6546
231 Ga0501044_0054697 3300049823 Bacteria 4101
232 Ga0501044_0167912 3300049823 Bacteria 2167
233 nmdc:mga07m45_11908_c2 3300050496 Bacteria 3060
234 nmdc:mga08x19_51_c1 3300050514 Bacteria 124093
235 Ga0495619_0000743 3300053085 Bacteria 21213
236 Ga0500643_000006 3300053087 Bacteria 479605
237 Ga0500595_005911 3300053119 Bacteria 5268
238 Ga0500595_010309 3300053119 Bacteria 3720
239 Ga0500573_0000006 3300053140 Bacteria 285988
240 Ga0501084_0000081 3300054114 Bacteria 70009
241 Ga0501084_0008446 3300054114 Bacteria 8512
242 Ga0501082_0029559 3300060353 Bacteria 4721

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049588 Ga0501072_0001154 Ga0501072_0001154_12459_14390 541
2 3300049742 Ga0501080_0015134 Ga0501080_0015134_1417_3348 541
3 3300049581 Ga0501047_0011081 Ga0501047_0011081_6045_7976 542
4 3300049583 Ga0501067_0003712 Ga0501067_0003712_3689_5620 542
5 3300005336 Ga0070680_100000505 Ga0070680_1000005058 550
6 3300005458 Ga0070681_10000003 Ga0070681_10000003120 550
7 3300005530 Ga0070679_100000063 Ga0070679_1000000635 550
8 3300025912 Ga0207707_10000001 Ga0207707_10000001931 550
9 3300025917 Ga0207660_10000081 Ga0207660_1000008138 550
10 3300025921 Ga0207652_10000413 Ga0207652_100004133 550
11 3300021377 Ga0213874_10001457 Ga0213874_100014575 570
12 3300039450 Ga0436363_1011852 Ga0436363_1011852_5696_7624 570
13 3300021377 Ga0213874_10000374 Ga0213874_100003745 571
14 3300039450 Ga0436363_1377394 Ga0436363_1377394_2869_4794 571
15 3300025913 Ga0207695_10050841 Ga0207695_100508413 576
16 3300049823 Ga0501044_0020615 Ga0501044_0020615_11_1831 580
17 3300010375 Ga0105239_10027109 Ga0105239_100271095 582
18 3300005563 Ga0068855_100166596 Ga0068855_1001665961 584
19 3300049589 Ga0501073_0064282 Ga0501073_0064282_548_2482 585
20 3300049744 Ga0501083_0045026 Ga0501083_0045026_196_2130 585
21 3300049822 Ga0501035_0005517 Ga0501035_0005517_3253_5187 585
22 3300054114 Ga0501084_0008446 Ga0501084_0008446_219_2153 585
23 3300005434 Ga0070709_10001001 Ga0070709_100010014 587
24 3300005435 Ga0070714_100017553 Ga0070714_1000175536 587
25 3300005436 Ga0070713_100000262 Ga0070713_10000026222 587
26 3300005614 Ga0068856_100003455 Ga0068856_1000034554 587
27 3300006175 Ga0070712_100000171 Ga0070712_10000017110 587
28 3300006914 Ga0075436_100001738 Ga0075436_1000017383 587
29 3300007076 Ga0075435_100042065 Ga0075435_1000420652 587
30 3300025906 Ga0207699_10000246 Ga0207699_100002466 587
31 3300025915 Ga0207693_10000556 Ga0207693_1000055624 587
32 3300025928 Ga0207700_10000005 Ga0207700_10000005419 587
33 3300025929 Ga0207664_10017517 Ga0207664_100175176 587
34 3300026078 Ga0207702_10000055 Ga0207702_1000005514 587
35 3300050514 nmdc:mga08x19_51_c1 nmdc:mga08x19_51_c1_27571_29493 587
36 3300010375 Ga0105239_10007363 Ga0105239_100073639 592
37 3300048929 Ga0496126_0001787 Ga0496126_0001787_17167_19083 592
38 3300049570 Ga0501033_0012574 Ga0501033_0012574_1493_3421 592
39 3300049574 Ga0501038_0067324 Ga0501038_0067324_1217_3004 592
40 3300049581 Ga0501047_0025627 Ga0501047_0025627_848_2776 592
41 3300028577 Ga0265318_10000017 Ga0265318_1000001778 593
42 iso_pu_bacteria 8019619141 8019621468 594
43 3300007076 Ga0075435_100022161 Ga0075435_1000221613 595
44 3300013307 Ga0157372_10072411 Ga0157372_100724114 597
45 3300031250 Ga0265331_10000006 Ga0265331_10000006287 597
46 3300031711 Ga0265314_10043677 Ga0265314_100436774 597
47 3300049572 Ga0501036_0101810 Ga0501036_0101810_17_1900 599
48 3300054114 Ga0501084_0000081 Ga0501084_0000081_50546_52465 599
49 3300005335 Ga0070666_10000613 Ga0070666_100006139 600
50 3300025903 Ga0207680_10001841 Ga0207680_100018413 600
51 3300025949 Ga0207667_10117183 Ga0207667_101171832 600
52 3300049823 Ga0501044_0023569 Ga0501044_0023569_2233_4212 601
53 3300014968 Ga0157379_10000489 Ga0157379_1000048910 602
54 3300028800 Ga0265338_10072419 Ga0265338_100724192 603
55 3300031241 Ga0265325_10000083 Ga0265325_100000837 603
56 3300031249 Ga0265339_10006390 Ga0265339_100063906 603
57 3300031595 Ga0265313_10002245 Ga0265313_100022459 603
58 3300046472 Ga0495580_0007123 Ga0495580_0007123_1451_3376 605
59 3300046683 Ga0495658_0000143 Ga0495658_0000143_19814_21739 605
60 3300049581 Ga0501047_0058283 Ga0501047_0058283_1627_3582 606
61 3300053119 Ga0500595_005911 Ga0500595_005911_466_2394 607
62 3300038443 Ga0395901_0074734 Ga0395901_0074734_673_2598 609
63 3300031711 Ga0265314_10003386 Ga0265314_100033864 610
64 3300049570 Ga0501033_0053651 Ga0501033_0053651_578_2503 610
65 3300028800 Ga0265338_10000006 Ga0265338_10000006581 612
66 3300031241 Ga0265325_10000003 Ga0265325_10000003225 612
67 3300031249 Ga0265339_10002825 Ga0265339_1000282510 612
68 3300031250 Ga0265331_10001232 Ga0265331_1000123212 612
69 3300031595 Ga0265313_10001127 Ga0265313_100011274 612
70 3300031711 Ga0265314_10054327 Ga0265314_100543272 612
71 3300035170 Ga0373943_0004687 Ga0373943_0004687_2250_4175 614
72 3300049741 Ga0501079_0053479 Ga0501079_0053479_964_2892 614
73 3300060353 Ga0501082_0029559 Ga0501082_0029559_1145_3073 614
74 3300006353 Ga0075370_10027663 Ga0075370_100276632 617
75 3300049570 Ga0501033_0007260 Ga0501033_0007260_6137_8071 617
76 3300049822 Ga0501035_0028784 Ga0501035_0028784_457_2391 617
77 3300050496 nmdc:mga07m45_11908_c2 nmdc:mga07m45_11908_c2_1037_3019 617
78 3300025949 Ga0207667_10017998 Ga0207667_100179986 618
79 3300049460 Ga0495682_0000969 Ga0495682_0000969_8466_10388 618
80 3300005844 Ga0068862_100032457 Ga0068862_1000324571 619
81 3300028380 Ga0268265_10022706 Ga0268265_100227064 620
82 3300046660 Ga0495625_0067729 Ga0495625_0067729_264_2192 621
83 3300053087 Ga0500643_000006 Ga0500643_000006_410101_412029 621
84 3300005548 Ga0070665_100075948 Ga0070665_1000759482 622
85 3300009093 Ga0105240_10123752 Ga0105240_101237521 622
86 3300025913 Ga0207695_10024291 Ga0207695_100242913 622
87 3300028379 Ga0268266_10047609 Ga0268266_100476094 622
88 3300037418 Ga0395900_0006457 Ga0395900_0006457_4153_6093 622
89 3300049589 Ga0501073_0024098 Ga0501073_0024098_1580_3520 622
90 3300026089 Ga0207648_10135918 Ga0207648_101359182 623
91 3300031250 Ga0265331_10002603 Ga0265331_100026039 623
92 3300031251 Ga0265327_10000808 Ga0265327_1000080842 623
93 3300049575 Ga0501039_0001645 Ga0501039_0001645_7239_9179 623
94 3300049586 Ga0501070_0025377 Ga0501070_0025377_2221_4161 623
95 3300049742 Ga0501080_0018727 Ga0501080_0018727_1630_3555 623
96 3300049572 Ga0501036_0030021 Ga0501036_0030021_1605_3533 624
97 3300049579 Ga0501043_0020932 Ga0501043_0020932_3159_5087 624
98 3300049581 Ga0501047_0004801 Ga0501047_0004801_1618_3546 624
99 3300049822 Ga0501035_0027213 Ga0501035_0027213_650_2578 624
100 3300049823 Ga0501044_0004520 Ga0501044_0004520_1247_3175 624
101 3300005336 Ga0070680_100070233 Ga0070680_1000702332 625
102 3300005355 Ga0070671_100014945 Ga0070671_1000149453 625
103 3300005616 Ga0068852_100073754 Ga0068852_1000737542 625
104 3300013105 Ga0157369_10011936 Ga0157369_100119366 625
105 3300025917 Ga0207660_10083583 Ga0207660_100835832 625
106 3300025921 Ga0207652_10008950 Ga0207652_100089508 625
107 3300025924 Ga0207694_10000044 Ga0207694_10000044161 625
108 3300026142 Ga0207698_10011287 Ga0207698_100112875 625
109 3300026142 Ga0207698_10047721 Ga0207698_100477213 625
110 3300005327 Ga0070658_10017748 Ga0070658_100177483 626
111 3300005563 Ga0068855_100000374 Ga0068855_10000037463 626
112 3300009093 Ga0105240_10002036 Ga0105240_1000203635 626
113 3300009093 Ga0105240_10011216 Ga0105240_100112163 626
114 3300025913 Ga0207695_10000004 Ga0207695_10000004505 626
115 3300025949 Ga0207667_10000012 Ga0207667_10000012324 626
116 3300031711 Ga0265314_10046186 Ga0265314_100461863 627
117 3300037312 Ga0395899_0006437 Ga0395899_0006437_4987_7011 627
118 3300037418 Ga0395900_0006114 Ga0395900_0006114_4869_6893 627
119 3300037466 Ga0395898_0020257 Ga0395898_0020257_410_2434 627
120 3300038443 Ga0395901_0006230 Ga0395901_0006230_3489_5513 627
121 3300010375 Ga0105239_10009987 Ga0105239_100099874 628
122 3300031249 Ga0265339_10007893 Ga0265339_100078932 628
123 3300046536 Ga0495587_0027632 Ga0495587_0027632_87_2012 628
124 3300005435 Ga0070714_100000304 Ga0070714_1000003049 629
125 3300021384 Ga0213876_10000370 Ga0213876_1000037027 629
126 3300039437 Ga0436365_1599291 Ga0436365_1599291_21023_22945 629
127 3300009545 Ga0105237_10086818 Ga0105237_100868183 630
128 3300048929 Ga0496126_0046983 Ga0496126_0046983_821_2755 630
129 3300005329 Ga0070683_100098574 Ga0070683_1000985742 631
130 3300005338 Ga0068868_100068631 Ga0068868_1000686312 631
131 3300005367 Ga0070667_100019990 Ga0070667_1000199902 631
132 3300005618 Ga0068864_100027689 Ga0068864_1000276894 631
133 3300005842 Ga0068858_100024238 Ga0068858_1000242382 631
134 3300009098 Ga0105245_10057383 Ga0105245_100573833 631
135 3300013306 Ga0163162_10011726 Ga0163162_100117264 631
136 3300014325 Ga0163163_10024311 Ga0163163_100243116 631
137 3300021384 Ga0213876_10009242 Ga0213876_100092423 631
138 3300025986 Ga0207658_10027083 Ga0207658_100270834 631
139 3300026023 Ga0207677_10069925 Ga0207677_100699252 631
140 3300026035 Ga0207703_10042273 Ga0207703_100422733 631
141 3300039437 Ga0436365_0261841 Ga0436365_0261841_1094_3010 631
142 3300005339 Ga0070660_100054939 Ga0070660_1000549391 632
143 3300005530 Ga0070679_100038524 Ga0070679_1000385242 632
144 3300005548 Ga0070665_100136987 Ga0070665_1001369872 632
145 3300006237 Ga0097621_100002762 Ga0097621_1000027629 632
146 3300006358 Ga0068871_100001266 Ga0068871_1000012669 632
147 3300025919 Ga0207657_10044127 Ga0207657_100441274 632
148 3300028379 Ga0268266_10028476 Ga0268266_100284763 632
149 3300005842 Ga0068858_100025465 Ga0068858_1000254655 633
150 3300003215 JGI25153J46596_10000755 JGI25153J46596_1000075514 634
151 3300025297 Ga0209758_1000008 Ga0209758_1000008760 634
152 3300044712 Ga0453684_0000015 Ga0453684_0000015_954175_956142 634
153 3300044712 Ga0453684_0001736 Ga0453684_0001736_43668_45635 634
154 3300046557 Ga0495622_0001189 Ga0495622_0001189_2905_4848 635
155 iso_pu_bacteria 2840878972 2840879415 635
156 iso_pu_bacteria 2874620515 2874625428 635
157 iso_pu_bacteria 2904666416 2904670613 635
158 3300005334 Ga0068869_100035279 Ga0068869_1000352793 636
159 3300005539 Ga0068853_100006769 Ga0068853_1000067693 636
160 3300009177 Ga0105248_10000001 Ga0105248_10000001973 636
161 3300025941 Ga0207711_10000001 Ga0207711_10000001898 636
162 3300026041 Ga0207639_10004819 Ga0207639_100048193 636
163 3300028379 Ga0268266_10037985 Ga0268266_100379853 636
164 iso_pu_bacteria 2508501042 2508690757 636
165 iso_pu_bacteria 2513237098 2513674335 636
166 iso_pu_bacteria 2513237139 2513876156 636
167 iso_pu_bacteria 2513237141 2513895060 636
168 iso_pu_bacteria 2524023205 2524442683 636
169 iso_pu_bacteria 2617270735 2617347211 636
170 iso_pu_bacteria 2824704595 2824705173 636
171 iso_pu_bacteria 2841974524 2841980898 636
172 iso_pu_bacteria 2847930680 2847937749 636
173 iso_pu_bacteria 2903768456 2903770018 636
174 iso_pu_bacteria 2932784394 2932793336 636
175 iso_pu_bacteria 2935648319 2935653077 636
176 iso_pu_bacteria 2935656913 2935661660 636
177 iso_pu_bacteria 2935675223 2935680990 636
178 iso_pu_bacteria 2935684952 2935694047 636
179 iso_pu_bacteria 2935713505 2935722634 636
180 iso_pu_bacteria 2935722832 2935731935 636
181 iso_pu_bacteria 2935732158 2935741264 636
182 iso_pu_bacteria 2935741537 2935750639 636
183 iso_pu_bacteria 2935750917 2935760114 636
184 iso_pu_bacteria 2935760218 2935765670 636
185 iso_pu_bacteria 2935837841 2935845890 636
186 iso_pu_bacteria 2935873716 2935880050 636
187 iso_pu_bacteria 2935992306 2935993685 636
188 iso_pu_bacteria 2936011229 2936015983 636
189 iso_pu_bacteria 2936019824 2936024581 636
190 iso_pu_bacteria 2936028420 2936033811 636
191 iso_pu_bacteria 2936046547 2936051726 636
192 iso_pu_bacteria 2936055302 2936061683 636
193 iso_pu_bacteria 2940556831 2940566027 636
194 iso_pu_bacteria 2941538514 2941546075 636
195 iso_pu_bacteria 8016613128 8016613801 636
196 iso_pu_bacteria 8056681323 8056689560 636
197 3300005344 Ga0070661_100000160 Ga0070661_10000016022 637
198 3300005563 Ga0068855_100211284 Ga0068855_1002112842 637
199 3300009093 Ga0105240_10024181 Ga0105240_100241813 637
200 3300009174 Ga0105241_10011011 Ga0105241_100110111 637
201 3300009551 Ga0105238_10042091 Ga0105238_100420913 637
202 3300025913 Ga0207695_10053382 Ga0207695_100533822 637
203 3300025920 Ga0207649_10000029 Ga0207649_1000002972 637
204 3300025949 Ga0207667_10030167 Ga0207667_100301673 637
205 3300031240 Ga0265320_10000155 Ga0265320_100001556 637
206 3300031241 Ga0265325_10018067 Ga0265325_100180673 637
207 3300031249 Ga0265339_10015969 Ga0265339_100159693 637
208 3300031595 Ga0265313_10034516 Ga0265313_100345162 637
209 3300049569 Ga0501032_0012725 Ga0501032_0012725_3282_5204 637
210 3300049570 Ga0501033_0005663 Ga0501033_0005663_7829_9751 637
211 3300049571 Ga0501034_0072714 Ga0501034_0072714_683_2605 637
212 3300049572 Ga0501036_0011669 Ga0501036_0011669_1130_3052 637
213 3300049572 Ga0501036_0030029 Ga0501036_0030029_136_2061 637
214 3300049580 Ga0501046_0005559 Ga0501046_0005559_3932_5854 637
215 3300049581 Ga0501047_0104199 Ga0501047_0104199_204_2126 637
216 3300049586 Ga0501070_0008640 Ga0501070_0008640_1001_2923 637
217 3300049589 Ga0501073_0101168 Ga0501073_0101168_61_1983 637
218 3300049822 Ga0501035_0008521 Ga0501035_0008521_4507_6432 637
219 3300049823 Ga0501044_0054697 Ga0501044_0054697_500_2422 637
220 3300049823 Ga0501044_0167912 Ga0501044_0167912_145_2070 637
221 3300039062 Ga0400483_063180 Ga0400483_063180_14_1972 639
222 3300003320 rootH2_10149955 rootH2_101499552 640
223 3300005458 Ga0070681_10132506 Ga0070681_101325062 640
224 3300025912 Ga0207707_10004780 Ga0207707_1000478012 640
225 3300027296 Ga0209389_1000124 Ga0209389_100012426 640
226 3300027361 Ga0209489_113224 Ga0209489_1132247 640
227 3300027363 Ga0209700_100205 Ga0209700_10020542 640
228 3300036401 Ga0373937_0001725 Ga0373937_0001725_15135_17132 640
229 3300037466 Ga0395898_0013431 Ga0395898_0013431_1737_3734 640
230 3300045976 Ga0466967_0010809 Ga0466967_0010809_1599_3596 640
231 3300045976 Ga0466967_0042471 Ga0466967_0042471_1549_3546 640
232 3300046462 Ga0495651_0003468 Ga0495651_0003468_7406_9403 640
233 3300046463 Ga0495653_0001172 Ga0495653_0001172_3961_5958 640
234 3300046511 Ga0495608_0000272 Ga0495608_0000272_27361_29358 640
235 3300046536 Ga0495587_0007014 Ga0495587_0007014_2556_4553 640
236 3300046559 Ga0495667_0004758 Ga0495667_0004758_2684_4681 640
237 3300046675 Ga0495657_0003634 Ga0495657_0003634_7585_9582 640
238 3300046679 Ga0495623_0002245 Ga0495623_0002245_7533_9530 640
239 3300047317 Ga0495604_0004436 Ga0495604_0004436_7394_9391 640
240 3300047322 Ga0495680_0001508 Ga0495680_0001508_15431_17428 640
241 3300047444 Ga0495675_0000362 Ga0495675_0000362_21982_23979 640
242 3300048088 Ga0495602_0019874 Ga0495602_0019874_1972_3969 640
243 3300053085 Ga0495619_0000743 Ga0495619_0000743_18937_20934 640
244 3300005471 Ga0070698_100006045 Ga0070698_10000604511 641
245 3300005539 Ga0068853_100030550 Ga0068853_1000305504 641
246 3300025925 Ga0207650_10107800 Ga0207650_101078001 641
247 3300003214 JGI25165J46597_1000017 JGI25165J46597_100001781 642
248 3300005327 Ga0070658_10010049 Ga0070658_100100497 642
249 3300005334 Ga0068869_100003248 Ga0068869_10000324811 642
250 3300005459 Ga0068867_100008785 Ga0068867_1000087855 642
251 3300005530 Ga0070679_100001255 Ga0070679_1000012552 642
252 3300005539 Ga0068853_100108148 Ga0068853_1001081481 642
253 3300005548 Ga0070665_100001553 Ga0070665_10000155320 642
254 3300005548 Ga0070665_100048874 Ga0070665_1000488744 642
255 3300005563 Ga0068855_100041363 Ga0068855_1000413633 642
256 3300006237 Ga0097621_100018600 Ga0097621_1000186003 642
257 3300006358 Ga0068871_100067383 Ga0068871_1000673833 642
258 3300009093 Ga0105240_10033827 Ga0105240_100338275 642
259 3300009098 Ga0105245_10044300 Ga0105245_100443004 642
260 3300009174 Ga0105241_10026306 Ga0105241_100263064 642
261 3300009177 Ga0105248_10027643 Ga0105248_100276434 642
262 3300009545 Ga0105237_10088195 Ga0105237_100881952 642
263 3300013308 Ga0157375_10023268 Ga0157375_100232684 642
264 3300014325 Ga0163163_10000004 Ga0163163_10000004314 642
265 3300014968 Ga0157379_10007333 Ga0157379_100073334 642
266 3300014969 Ga0157376_10013814 Ga0157376_100138144 642
267 3300025261 Ga0209233_1000006 Ga0209233_1000006259 642
268 3300025261 Ga0209233_1001660 Ga0209233_10016604 642
269 3300025908 Ga0207643_10007728 Ga0207643_100077285 642
270 3300025909 Ga0207705_10006123 Ga0207705_100061236 642
271 3300025913 Ga0207695_10024334 Ga0207695_100243343 642
272 3300025921 Ga0207652_10043292 Ga0207652_100432923 642
273 3300025941 Ga0207711_10015114 Ga0207711_100151144 642
274 3300025942 Ga0207689_10022410 Ga0207689_100224103 642
275 3300026089 Ga0207648_10015315 Ga0207648_100153153 642
276 3300026121 Ga0207683_10002290 Ga0207683_100022905 642
277 3300031730 Ga0307516_10013763 Ga0307516_100137634 642
278 3300053119 Ga0500595_010309 Ga0500595_010309_786_2726 642
279 3300053140 Ga0500573_0000006 Ga0500573_0000006_258003_259931 642

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01578

Cytochrom_C_asm

Cytochrome C assembly protein

79

287

0.97

PF16327

CcmF_C

Cytochrome c-type biogenesis protein CcmF C-terminal

304

654

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zmq-assembly1.cif.gz_A cytochrome c heme lyase ccmf 0.8991 1 618
6zmq-assembly1.cif.gz_A cytochrome c heme lyase ccmf 0.8803 1 618
6dg6-assembly5.cif.gz_E structure of a de novo designed interleukin-2/interleukin-15 mimetic 0.6626 1 141
6dg6-assembly5.cif.gz_E structure of a de novo designed interleukin-2/interleukin-15 mimetic 0.6542 1 141
1px3-assembly1.cif.gz_D e. coli (lacz) beta-galactosidase (g794a) 0.5668 514 580
ID Description Score Start End Superfamily
af_Q0WRW8_184_365_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.6601 2 147 1.20.120.1770
af_A0A0R0H600_74_264_1.20.120.80 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.6227 2 141 1.20.120.80
2yevD03 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle 0.5922 4 140 1.20.120.80
af_K7KZX1_376_557_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.5884 2 143 1.20.120.1770
af_Q9W4U9_23_227_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.5846 98 329 1.20.120.1770
ID Description Score Start End GO Terms
AF-A0A530QQW5-F1-model_v4 Heme lyase NrfEFG subunit NrfE 0.9803 197 368 GO:0015232
GO:0016020
GO:0016829
GO:0017004
GO:0020037
AF-A0A257MV20-F1-model_v4 Cytochrome c-type bioproteinis protein CcmF 0.9752 248 376 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A2T3IE88-F1-model_v4 Heme lyase NrfEFG subunit NrfE 0.9728 205 391 GO:0005886
GO:0015232
GO:0016829
GO:0017004
GO:0020037
AF-A0A6W0A504-F1-model_v4 Cytochrome c assembly protein domain-containing protein 0.9726 165 320 GO:0005886
GO:0015232
GO:0017004
GO:0020037
AF-A0A7C5SD03-F1-model_v4 Heme lyase CcmF/NrfE family subunit 0.9705 200 617 GO:0005886
GO:0015232
GO:0016829
GO:0017004
GO:0020037

Feature Viewer

pLDDT pTM Quality
85.11 0.89 High
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Predicted Structure (AlphaFold2)

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