F383142

General Info

Members Datasets Scaffolds Average Seq Length
279 151 558 240

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10118462|Ga0265340_101184622
Length 269
Sequence MPDDVPPGGGLAPRRPRAVLFREPVGYPPVVVRLDVLLARNAGWSRTAARAVIAEGRVQIGGTVVEDPRREIAPEALPLVVVLDDEELPLHDRVTLALNKPLGCVTALRDPRHPTAYELLQEAPLFGELRPVGRLDLDTSGLLIWSTDGTEIQRLTHPKRAVPRTYQAALAGPFGPLPAQLVLDDGHEPKISALETLPREAAHPSLDVPAETGALATITIIGGAYHEVRRIFAALGSHVLGLCRVSFGEVALPRDLAPGEYQLLPNVRR

Samples

Sample ID Description Type Environment
1 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
87 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
88 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
89 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
90 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
91 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
94 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
95 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
96 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
100 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
101 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
102 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
103 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
104 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
105 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
106 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
107 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
111 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
120 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
138 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
139 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.36
Nodule 0
Rhizoplane 5.73
Rhizosphere 92.47
Stem 0
Stem Tuber 0
Unclassified 8.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265340_10118462 3300031247 Bacteria 1219
2 rootH2_10184867 3300003320 Bacteria 1380
3 rootH1_10019037 3300003323 Bacteria 2697
4 rootH1_10107564 3300003323 Bacteria 3907
5 Ga0070676_10029254 3300005328 Bacteria 3133
6 Ga0070683_100538090 3300005329 Bacteria 1117
7 Ga0070683_100723125 3300005329 Unclassified 954
8 Ga0070690_100018544 3300005330 Bacteria 4206
9 Ga0070690_100220099 3300005330 Bacteria 1330
10 Ga0070670_100029991 3300005331 Bacteria 4683
11 Ga0070670_100404819 3300005331 Bacteria 1205
12 Ga0070666_10042533 3300005335 Bacteria 3041
13 Ga0070680_100021724 3300005336 Bacteria 5103
14 Ga0068868_100251433 3300005338 Bacteria 1488
15 Ga0070689_100000005 3300005340 Bacteria 396551
16 Ga0070689_100012638 3300005340 Bacteria 6088
17 Ga0070689_100054727 3300005340 Bacteria 3090
18 Ga0070687_100037515 3300005343 Bacteria 2423
19 Ga0070687_100082992 3300005343 Bacteria 1754
20 Ga0070687_100092991 3300005343 Bacteria 1672
21 Ga0070669_100086514 3300005353 Bacteria 2342
22 Ga0070675_100089179 3300005354 Bacteria 2582
23 Ga0070671_100268572 3300005355 Bacteria 1450
24 Ga0070674_100033578 3300005356 Bacteria 3417
25 Ga0070673_100002660 3300005364 Bacteria 10936
26 Ga0070673_100076057 3300005364 Bacteria 2710
27 Ga0070673_100615248 3300005364 Unclassified 992
28 Ga0070688_100121267 3300005365 Bacteria 1752
29 Ga0070688_100150215 3300005365 Bacteria 1592
30 Ga0070659_100048958 3300005366 Bacteria 3322
31 Ga0070659_100732112 3300005366 Bacteria 857
32 Ga0070667_100341340 3300005367 Bacteria 1354
33 Ga0070667_100414640 3300005367 Bacteria 1227
34 Ga0070713_100258412 3300005436 Bacteria 1591
35 Ga0070701_10149992 3300005438 Bacteria 1341
36 Ga0070700_100006457 3300005441 Bacteria 6276
37 Ga0070678_100106955 3300005456 Bacteria 2181
38 Ga0070662_100156732 3300005457 Bacteria 1778
39 Ga0068867_100058584 3300005459 Bacteria 2854
40 Ga0070707_100217639 3300005468 Bacteria 1861
41 Ga0070679_100015902 3300005530 Bacteria 7242
42 Ga0070679_100033934 3300005530 Bacteria 5055
43 Ga0070679_100112338 3300005530 Bacteria 2710
44 Ga0070684_100074489 3300005535 Bacteria 2993
45 Ga0070684_100296586 3300005535 Bacteria 1483
46 Ga0070684_100391155 3300005535 Unclassified 1281
47 Ga0070672_100024801 3300005543 Bacteria 4438
48 Ga0070672_100034055 3300005543 Bacteria 3863
49 Ga0070672_100421392 3300005543 Unclassified 1147
50 Ga0070686_100000905 3300005544 Bacteria 17233
51 Ga0070686_100008360 3300005544 Bacteria 5794
52 Ga0068855_100016028 3300005563 Bacteria 9015
53 Ga0068855_101062096 3300005563 Bacteria 848
54 Ga0068856_100070004 3300005614 Bacteria 3470
55 Ga0068856_100154566 3300005614 Bacteria 2304
56 Ga0068856_100278633 3300005614 Bacteria 1689
57 Ga0070702_100274203 3300005615 Bacteria 1155
58 Ga0068859_100607786 3300005617 Bacteria 1186
59 Ga0068866_10074322 3300005718 Bacteria 1807
60 Ga0068861_100053938 3300005719 Bacteria 3061
61 Ga0068860_100353026 3300005843 Bacteria 1447
62 Ga0068862_100713093 3300005844 Bacteria 973
63 Ga0068865_100098079 3300006881 Bacteria 2140
64 Ga0097620_100607873 3300006931 Bacteria 1186
65 Ga0105240_10011515 3300009093 Bacteria 12311
66 Ga0105240_10225492 3300009093 Unclassified 2181
67 Ga0111539_10001200 3300009094 Bacteria 34497
68 Ga0105241_10253649 3300009174 Bacteria 1492
69 Ga0105237_10006159 3300009545 Bacteria 13409
70 Ga0105238_10004832 3300009551 Bacteria 13332
71 Ga0105238_10192642 3300009551 Bacteria 2014
72 Ga0157374_10199035 3300013296 Unclassified 1961
73 Ga0157378_10059610 3300013297 Bacteria 3405
74 Ga0163163_10732718 3300014325 Unclassified 1052
75 Ga0157376_10607308 3300014969 Unclassified 1089
76 Ga0207666_1006044 3300025271 Bacteria 1562
77 Ga0207680_10070919 3300025903 Bacteria 2158
78 Ga0207645_10029134 3300025907 Bacteria 3559
79 Ga0207705_10030267 3300025909 Bacteria 3862
80 Ga0207654_10121459 3300025911 Bacteria 1641
81 Ga0207695_10009129 3300025913 Bacteria 12309
82 Ga0207695_10104488 3300025913 Bacteria 2821
83 Ga0207695_10640270 3300025913 Bacteria 944
84 Ga0207671_10001769 3300025914 Bacteria 24275
85 Ga0207662_10017752 3300025918 Bacteria 4028
86 Ga0207662_10028258 3300025918 Bacteria 3241
87 Ga0207652_10009294 3300025921 Bacteria 7903
88 Ga0207652_10016551 3300025921 Bacteria 6022
89 Ga0207652_10029406 3300025921 Bacteria 4594
90 Ga0207646_10274091 3300025922 Bacteria 1525
91 Ga0207681_10010797 3300025923 Bacteria 5607
92 Ga0207694_10021288 3300025924 Bacteria 4913
93 Ga0207694_10305105 3300025924 Bacteria 1311
94 Ga0207650_10161882 3300025925 Unclassified 1773
95 Ga0207644_10063858 3300025931 Bacteria 2675
96 Ga0207690_10445407 3300025932 Bacteria 1040
97 Ga0207706_10048475 3300025933 Bacteria 3757
98 Ga0207670_10000004 3300025936 Bacteria 707262
99 Ga0207670_10006759 3300025936 Bacteria 6375
100 Ga0207670_10063952 3300025936 Bacteria 2520
101 Ga0207669_10047564 3300025937 Bacteria 2542
102 Ga0207691_10054393 3300025940 Bacteria 3651
103 Ga0207691_10061379 3300025940 Bacteria 3415
104 Ga0207691_10439616 3300025940 Unclassified 1111
105 Ga0207689_10263986 3300025942 Bacteria 1425
106 Ga0207661_10021558 3300025944 Bacteria 4829
107 Ga0207661_10031389 3300025944 Bacteria 4103
108 Ga0207661_10368935 3300025944 Bacteria 1298
109 Ga0207661_10606349 3300025944 Unclassified 1005
110 Ga0207667_10205896 3300025949 Bacteria 2017
111 Ga0207667_10970157 3300025949 Bacteria 839
112 Ga0207651_10000277 3300025960 Bacteria 21979
113 Ga0207651_10018781 3300025960 Bacteria 4125
114 Ga0207658_10141886 3300025986 Bacteria 1945
115 Ga0207677_10217858 3300026023 Bacteria 1529
116 Ga0207703_10059463 3300026035 Bacteria 3121
117 Ga0207708_10016645 3300026075 Bacteria 5531
118 Ga0207702_10122919 3300026078 Bacteria 2326
119 Ga0207702_10194451 3300026078 Bacteria 1876
120 Ga0207648_10004058 3300026089 Bacteria 15193
121 Ga0207674_10052480 3300026116 Bacteria 4158
122 Ga0207675_100035487 3300026118 Bacteria 4651
123 Ga0207683_10317807 3300026121 Bacteria 1426
124 Ga0207683_10514514 3300026121 Unclassified 1106
125 Ga0207698_10305022 3300026142 Bacteria 1484
126 Ga0207428_10012379 3300027907 Bacteria 7495
127 Ga0268264_10533230 3300028381 Bacteria 1149
128 Ga0265337_1017469 3300028556 Bacteria 2300
129 Ga0265337_1044235 3300028556 Bacteria 1271
130 Ga0265319_1009219 3300028563 Bacteria 4228
131 Ga0265319_1012311 3300028563 Bacteria 3464
132 Ga0265334_10013462 3300028573 Bacteria 3423
133 Ga0265334_10043241 3300028573 Unclassified 1753
134 Ga0265318_10000074 3300028577 Bacteria 95383
135 Ga0265318_10000224 3300028577 Bacteria 48801
136 Ga0265323_10011862 3300028653 Bacteria 3505
137 Ga0265322_10051170 3300028654 Unclassified 1172
138 Ga0265338_10004742 3300028800 Bacteria 18187
139 Ga0265338_10014891 3300028800 Bacteria 8601
140 Ga0265338_10263970 3300028800 Bacteria 1264
141 Ga0265324_10000126 3300029957 Bacteria 60652
142 Ga0265324_10050485 3300029957 Unclassified 1430
143 Ga0265330_10000063 3300031235 Bacteria 93489
144 Ga0265330_10001256 3300031235 Bacteria 14851
145 Ga0265330_10002874 3300031235 Bacteria 9202
146 Ga0265330_10004727 3300031235 Bacteria 6878
147 Ga0265332_10000180 3300031238 Bacteria 52220
148 Ga0265332_10000354 3300031238 Bacteria 34321
149 Ga0265332_10121407 3300031238 Bacteria 1097
150 Ga0265328_10000328 3300031239 Bacteria 22160
151 Ga0265328_10000736 3300031239 Bacteria 15190
152 Ga0265328_10005965 3300031239 Bacteria 5186
153 Ga0265320_10000016 3300031240 Bacteria 197556
154 Ga0265320_10001625 3300031240 Bacteria 16077
155 Ga0265320_10001711 3300031240 Bacteria 15588
156 Ga0265320_10230232 3300031240 Unclassified 824
157 Ga0265325_10002070 3300031241 Bacteria 13747
158 Ga0265325_10003054 3300031241 Bacteria 11069
159 Ga0265325_10140277 3300031241 Bacteria 1150
160 Ga0265325_10154726 3300031241 Unclassified 1082
161 Ga0265329_10000070 3300031242 Bacteria 45588
162 Ga0265329_10013787 3300031242 Bacteria 2869
163 Ga0265340_10000164 3300031247 Bacteria 33628
164 Ga0265339_10000001 3300031249 Bacteria 613713
165 Ga0265339_10007809 3300031249 Bacteria 6868
166 Ga0265339_10008726 3300031249 Bacteria 6426
167 Ga0265339_10012952 3300031249 Bacteria 5070
168 Ga0265339_10055663 3300031249 Bacteria 2144
169 Ga0265331_10000010 3300031250 Bacteria 312076
170 Ga0265331_10000375 3300031250 Bacteria 46599
171 Ga0265331_10008982 3300031250 Bacteria 5647
172 Ga0265316_10000698 3300031344 Bacteria 37359
173 Ga0265316_10001232 3300031344 Bacteria 27522
174 Ga0265316_10001453 3300031344 Bacteria 25436
175 Ga0265316_10002211 3300031344 Bacteria 20448
176 Ga0265316_10143639 3300031344 Bacteria 1791
177 Ga0265313_10002473 3300031595 Bacteria 15929
178 Ga0265313_10005208 3300031595 Bacteria 9641
179 Ga0265313_10013426 3300031595 Bacteria 4917
180 Ga0265313_10018349 3300031595 Bacteria 3931
181 Ga0265313_10037629 3300031595 Unclassified 2416
182 Ga0265313_10066902 3300031595 Unclassified 1664
183 Ga0265313_10075687 3300031595 Bacteria 1540
184 Ga0265313_10115734 3300031595 Bacteria 1174
185 Ga0265314_10000015 3300031711 Bacteria 397180
186 Ga0265314_10000035 3300031711 Bacteria 240629
187 Ga0265314_10003104 3300031711 Bacteria 16349
188 Ga0265314_10004177 3300031711 Bacteria 13575
189 Ga0265314_10004868 3300031711 Bacteria 12272
190 Ga0265314_10014118 3300031711 Bacteria 6412
191 Ga0265342_10000128 3300031712 Bacteria 84420
192 Ga0265342_10000301 3300031712 Bacteria 56116
193 Ga0265342_10000368 3300031712 Bacteria 49570
194 Ga0265342_10001532 3300031712 Bacteria 21380
195 Ga0265342_10002819 3300031712 Bacteria 14692
196 Ga0265342_10004842 3300031712 Bacteria 10433
197 Ga0265342_10009675 3300031712 Bacteria 6761
198 Ga0265342_10010265 3300031712 Bacteria 6520
199 Ga0373950_0000020 3300034818 Bacteria 209621
200 Ga0373950_0000120 3300034818 Bacteria 13817
201 Ga0373936_0012281 3300035113 Bacteria 3256
202 Ga0373943_0000835 3300035170 Bacteria 13580
203 Ga0373955_0172762 3300035172 Bacteria 1280
204 Ga0373927_0222091 3300035695 Unclassified 1241
205 Ga0373933_0000141 3300035724 Bacteria 46355
206 Ga0373933_0028591 3300035724 Bacteria 3218
207 Ga0373933_0052390 3300035724 Bacteria 2442
208 Ga0373937_0043596 3300036401 Bacteria 4096
209 Ga0373937_0090196 3300036401 Bacteria 2839
210 Ga0373937_0413105 3300036401 Bacteria 1280
211 Ga0373925_0101594 3300037068 Bacteria 2211
212 Ga0436365_1595348 3300039437 Bacteria 2110
213 Ga0451577_0127745 3300042876 Bacteria 2279
214 Ga0451577_0858330 3300042876 Unclassified 819
215 Ga0453684_0000116 3300044712 Bacteria 352304
216 Ga0453684_0038912 3300044712 Bacteria 6489
217 Ga0451576_0736300 3300045051 Bacteria 1036
218 Ga0495630_0253538 3300046517 Bacteria 1344
219 Ga0495586_0058446 3300046535 Bacteria 2094
220 Ga0495634_0000959 3300046642 Bacteria 27292
221 Ga0495657_0047158 3300046675 Bacteria 2915
222 Ga0495674_0004069 3300047319 Bacteria 14143
223 Ga0496100_0012060 3300048903 Bacteria 4943
224 Ga0496100_0220152 3300048903 Unclassified 1393
225 Ga0496101_0049989 3300048904 Bacteria 3008
226 Ga0496101_0483577 3300048904 Bacteria 978
227 Ga0496104_0022714 3300048907 Bacteria 5762
228 Ga0496104_0313780 3300048907 Bacteria 1481
229 Ga0496105_0082155 3300048908 Unclassified 2661
230 Ga0496105_0182495 3300048908 Bacteria 1718
231 Ga0496106_0022977 3300048909 Bacteria 4632
232 Ga0496106_0174104 3300048909 Bacteria 1707
233 Ga0496112_0555271 3300048915 Bacteria 1082
234 Ga0496114_0000271 3300048917 Bacteria 37792
235 Ga0496114_0001350 3300048917 Bacteria 18593
236 Ga0496114_0206933 3300048917 Unclassified 1720
237 Ga0496114_0343815 3300048917 Bacteria 1319
238 Ga0496115_0378204 3300048918 Bacteria 1152
239 Ga0501034_0000026 3300049571 Bacteria 261125
240 Ga0501036_0041269 3300049572 Bacteria 3904
241 Ga0501043_0002163 3300049579 Bacteria 16764
242 Ga0501046_0008175 3300049580 Bacteria 9140
243 Ga0501047_0000017 3300049581 Bacteria 276932
244 Ga0501048_0000793 3300049582 Bacteria 23177
245 Ga0501067_0000019 3300049583 Bacteria 100678
246 Ga0501067_0026920 3300049583 Bacteria 3184
247 Ga0501068_0006810 3300049584 Bacteria 6320
248 Ga0501069_0008095 3300049585 Bacteria 5522
249 Ga0501069_0034575 3300049585 Bacteria 2783
250 Ga0501070_0000082 3300049586 Bacteria 81256
251 Ga0501070_0000316 3300049586 Bacteria 43781
252 Ga0501071_0271914 3300049587 Bacteria 1281
253 Ga0501072_0000112 3300049588 Bacteria 59894
254 Ga0501072_0452092 3300049588 Bacteria 1017
255 Ga0501073_0000165 3300049589 Bacteria 43269
256 Ga0501073_0000286 3300049589 Bacteria 33311
257 Ga0501073_0038635 3300049589 Bacteria 3384
258 Ga0501073_0062278 3300049589 Bacteria 2602
259 Ga0501073_0097193 3300049589 Bacteria 2045
260 Ga0501074_0003004 3300049590 Bacteria 11869
261 Ga0501074_0041565 3300049590 Unclassified 3328
262 Ga0501074_0082352 3300049590 Bacteria 2308
263 Ga0501079_0000114 3300049741 Bacteria 41836
264 Ga0501079_0485006 3300049741 Bacteria 972
265 Ga0501080_0001429 3300049742 Bacteria 20060
266 Ga0501080_0022492 3300049742 Bacteria 5840
267 Ga0501080_0048796 3300049742 Bacteria 3939
268 Ga0501080_0155693 3300049742 Bacteria 2111
269 Ga0501080_0194035 3300049742 Bacteria 1865
270 Ga0501083_0004946 3300049744 Bacteria 9438
271 Ga0501083_0022287 3300049744 Bacteria 4395
272 Ga0501083_0161350 3300049744 Bacteria 1466
273 nmdc:mga08y16_70012_c1 3300050511 Bacteria 3657
274 Ga0500555_019306 3300053103 Bacteria 1963
275 Ga0501084_0000003 3300054114 Bacteria 267909
276 Ga0501084_0275298 3300054114 Bacteria 1421
277 Ga0501082_0001029 3300060353 Bacteria 24658
278 Ga0501082_0037203 3300060353 Bacteria 4194
279 Ga0501082_0057547 3300060353 Bacteria 3349
280 Ga0265340_10118462
281 rootH2_10184867
282 rootH1_10019037
283 rootH1_10107564
284 Ga0070676_10029254
285 Ga0070683_100538090
286 Ga0070683_100723125
287 Ga0070690_100018544
288 Ga0070690_100220099
289 Ga0070670_100029991
290 Ga0070670_100404819
291 Ga0070666_10042533
292 Ga0070680_100021724
293 Ga0068868_100251433
294 Ga0070689_100000005
295 Ga0070689_100012638
296 Ga0070689_100054727
297 Ga0070687_100037515
298 Ga0070687_100082992
299 Ga0070687_100092991
300 Ga0070669_100086514
301 Ga0070675_100089179
302 Ga0070671_100268572
303 Ga0070674_100033578
304 Ga0070673_100002660
305 Ga0070673_100076057
306 Ga0070673_100615248
307 Ga0070688_100121267
308 Ga0070688_100150215
309 Ga0070659_100048958
310 Ga0070659_100732112
311 Ga0070667_100341340
312 Ga0070667_100414640
313 Ga0070713_100258412
314 Ga0070701_10149992
315 Ga0070700_100006457
316 Ga0070678_100106955
317 Ga0070662_100156732
318 Ga0068867_100058584
319 Ga0070707_100217639
320 Ga0070679_100015902
321 Ga0070679_100033934
322 Ga0070679_100112338
323 Ga0070684_100074489
324 Ga0070684_100296586
325 Ga0070684_100391155
326 Ga0070672_100024801
327 Ga0070672_100034055
328 Ga0070672_100421392
329 Ga0070686_100000905
330 Ga0070686_100008360
331 Ga0068855_100016028
332 Ga0068855_101062096
333 Ga0068856_100070004
334 Ga0068856_100154566
335 Ga0068856_100278633
336 Ga0070702_100274203
337 Ga0068859_100607786
338 Ga0068866_10074322
339 Ga0068861_100053938
340 Ga0068860_100353026
341 Ga0068862_100713093
342 Ga0068865_100098079
343 Ga0097620_100607873
344 Ga0105240_10011515
345 Ga0105240_10225492
346 Ga0111539_10001200
347 Ga0105241_10253649
348 Ga0105237_10006159
349 Ga0105238_10004832
350 Ga0105238_10192642
351 Ga0157374_10199035
352 Ga0157378_10059610
353 Ga0163163_10732718
354 Ga0157376_10607308
355 Ga0207666_1006044
356 Ga0207680_10070919
357 Ga0207645_10029134
358 Ga0207705_10030267
359 Ga0207654_10121459
360 Ga0207695_10009129
361 Ga0207695_10104488
362 Ga0207695_10640270
363 Ga0207671_10001769
364 Ga0207662_10017752
365 Ga0207662_10028258
366 Ga0207652_10009294
367 Ga0207652_10016551
368 Ga0207652_10029406
369 Ga0207646_10274091
370 Ga0207681_10010797
371 Ga0207694_10021288
372 Ga0207694_10305105
373 Ga0207650_10161882
374 Ga0207644_10063858
375 Ga0207690_10445407
376 Ga0207706_10048475
377 Ga0207670_10000004
378 Ga0207670_10006759
379 Ga0207670_10063952
380 Ga0207669_10047564
381 Ga0207691_10054393
382 Ga0207691_10061379
383 Ga0207691_10439616
384 Ga0207689_10263986
385 Ga0207661_10021558
386 Ga0207661_10031389
387 Ga0207661_10368935
388 Ga0207661_10606349
389 Ga0207667_10205896
390 Ga0207667_10970157
391 Ga0207651_10000277
392 Ga0207651_10018781
393 Ga0207658_10141886
394 Ga0207677_10217858
395 Ga0207703_10059463
396 Ga0207708_10016645
397 Ga0207702_10122919
398 Ga0207702_10194451
399 Ga0207648_10004058
400 Ga0207674_10052480
401 Ga0207675_100035487
402 Ga0207683_10317807
403 Ga0207683_10514514
404 Ga0207698_10305022
405 Ga0207428_10012379
406 Ga0268264_10533230
407 Ga0265337_1017469
408 Ga0265337_1044235
409 Ga0265319_1009219
410 Ga0265319_1012311
411 Ga0265334_10013462
412 Ga0265334_10043241
413 Ga0265318_10000074
414 Ga0265318_10000224
415 Ga0265323_10011862
416 Ga0265322_10051170
417 Ga0265338_10004742
418 Ga0265338_10014891
419 Ga0265338_10263970
420 Ga0265324_10000126
421 Ga0265324_10050485
422 Ga0265330_10000063
423 Ga0265330_10001256
424 Ga0265330_10002874
425 Ga0265330_10004727
426 Ga0265332_10000180
427 Ga0265332_10000354
428 Ga0265332_10121407
429 Ga0265328_10000328
430 Ga0265328_10000736
431 Ga0265328_10005965
432 Ga0265320_10000016
433 Ga0265320_10001625
434 Ga0265320_10001711
435 Ga0265320_10230232
436 Ga0265325_10002070
437 Ga0265325_10003054
438 Ga0265325_10140277
439 Ga0265325_10154726
440 Ga0265329_10000070
441 Ga0265329_10013787
442 Ga0265340_10000164
443 Ga0265339_10000001
444 Ga0265339_10007809
445 Ga0265339_10008726
446 Ga0265339_10012952
447 Ga0265339_10055663
448 Ga0265331_10000010
449 Ga0265331_10000375
450 Ga0265331_10008982
451 Ga0265316_10000698
452 Ga0265316_10001232
453 Ga0265316_10001453
454 Ga0265316_10002211
455 Ga0265316_10143639
456 Ga0265313_10002473
457 Ga0265313_10005208
458 Ga0265313_10013426
459 Ga0265313_10018349
460 Ga0265313_10037629
461 Ga0265313_10066902
462 Ga0265313_10075687
463 Ga0265313_10115734
464 Ga0265314_10000015
465 Ga0265314_10000035
466 Ga0265314_10003104
467 Ga0265314_10004177
468 Ga0265314_10004868
469 Ga0265314_10014118
470 Ga0265342_10000128
471 Ga0265342_10000301
472 Ga0265342_10000368
473 Ga0265342_10001532
474 Ga0265342_10002819
475 Ga0265342_10004842
476 Ga0265342_10009675
477 Ga0265342_10010265
478 Ga0373950_0000020
479 Ga0373950_0000120
480 Ga0373936_0012281
481 Ga0373943_0000835
482 Ga0373955_0172762
483 Ga0373927_0222091
484 Ga0373933_0000141
485 Ga0373933_0028591
486 Ga0373933_0052390
487 Ga0373937_0043596
488 Ga0373937_0090196
489 Ga0373937_0413105
490 Ga0373925_0101594
491 Ga0436365_1595348
492 Ga0451577_0127745
493 Ga0451577_0858330
494 Ga0453684_0000116
495 Ga0453684_0038912
496 Ga0451576_0736300
497 Ga0495630_0253538
498 Ga0495586_0058446
499 Ga0495634_0000959
500 Ga0495657_0047158
501 Ga0495674_0004069
502 Ga0496100_0012060
503 Ga0496100_0220152
504 Ga0496101_0049989
505 Ga0496101_0483577
506 Ga0496104_0022714
507 Ga0496104_0313780
508 Ga0496105_0082155
509 Ga0496105_0182495
510 Ga0496106_0022977
511 Ga0496106_0174104
512 Ga0496112_0555271
513 Ga0496114_0000271
514 Ga0496114_0001350
515 Ga0496114_0206933
516 Ga0496114_0343815
517 Ga0496115_0378204
518 Ga0501034_0000026
519 Ga0501036_0041269
520 Ga0501043_0002163
521 Ga0501046_0008175
522 Ga0501047_0000017
523 Ga0501048_0000793
524 Ga0501067_0000019
525 Ga0501067_0026920
526 Ga0501068_0006810
527 Ga0501069_0008095
528 Ga0501069_0034575
529 Ga0501070_0000082
530 Ga0501070_0000316
531 Ga0501071_0271914
532 Ga0501072_0000112
533 Ga0501072_0452092
534 Ga0501073_0000165
535 Ga0501073_0000286
536 Ga0501073_0038635
537 Ga0501073_0062278
538 Ga0501073_0097193
539 Ga0501074_0003004
540 Ga0501074_0041565
541 Ga0501074_0082352
542 Ga0501079_0000114
543 Ga0501079_0485006
544 Ga0501080_0001429
545 Ga0501080_0022492
546 Ga0501080_0048796
547 Ga0501080_0155693
548 Ga0501080_0194035
549 Ga0501083_0004946
550 Ga0501083_0022287
551 Ga0501083_0161350
552 nmdc:mga08y16_70012_c1
553 Ga0500555_019306
554 Ga0501084_0000003
555 Ga0501084_0275298
556 Ga0501082_0001029
557 Ga0501082_0037203
558 Ga0501082_0057547

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01479

S4

S4 domain

32

77

0.91

PF00849

PseudoU_synth_2

RNA pseudouridylate synthase

94

234

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8d8k-assembly1.cif.gz_D yeast mitochondrial small subunit assembly intermediate (state 2) 0.8557 8 59
3jbn-assembly1.cif.gz_E cryo-electron microscopy reconstruction of the plasmodium falciparum 80s ribosome bound to p-trna 0.85 8 48
8d8l-assembly1.cif.gz_D yeast mitochondrial small subunit assembly intermediate (state 3) 0.8464 8 60
6ywy-assembly1.cif.gz_DD the structure of the mitoribosome from neurospora crassa with bound trna at the p-site 0.8407 8 59
7mq9-assembly1.cif.gz_LZ cryo-em structure of the human ssu processome, state pre-a1* 0.8393 8 48
ID Description Score Start End Superfamily
1vioB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.9157 69 136 3.30.70.580
1kslA01 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.8957 8 64 3.10.290.10
af_Q2FY78_59_131_3.30.70.580 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Pseudouridine synthase I, catalytic domain, N-terminal subdomain 0.8866 66 136 3.30.70.580
af_P56799_3_142_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8742 8 49 1.20.1250.20
af_A0A144A2N8_107_181_3.10.290.10 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.8737 8 49 3.10.290.10
ID Description Score Start End GO Terms
AF-A0A1I1X3W8-F1-model_v4 Ribosomal small subunit pseudouridine synthase A 0.9627 7 242 GO:0001522
GO:0003723
GO:0006396
GO:0009982
GO:0140098
AF-A0A832E1T2-F1-model_v4 deleted 0.9391 2 242
AF-A6FY13-F1-model_v4 Ribosomal large subunit pseudouridine synthase B 0.9384 10 244 GO:0001522
GO:0003723
GO:0006396
GO:0009982
GO:0140098
AF-A6FY13-F1-model_v4 Ribosomal large subunit pseudouridine synthase B 0.9231 10 244 GO:0001522
GO:0003723
GO:0006396
GO:0009982
GO:0140098
AF-A0A3M2A461-F1-model_v4 rRNA pseudouridine synthase 0.9169 1 245 GO:0001522
GO:0003723
GO:0006396
GO:0009982
GO:0140098

Map