F383293

General Info

Members Datasets Scaffolds Average Seq Length
279 202 273 354

Family's Representative Sequence

Representative Sequence 3300048909|Ga0496106_0076315|Ga0496106_0076315_1159_2331
Length 390
Sequence MGKDLHIEVCSARASNSTKGSQRGCPCFLRVRREERRPMKKFRIAVIPGDGIGKEVMPEGLRVLEAVGRKFDVAWQFDEFDWSCDYYQKHGRMMPDDGLDQLRNHDAVFFGAAGWPATVPDHISLWGLLIPFRRGYDQYVNLRPVRLMPGMRCPLADRKPGDIDFWVVRENSEGEYSSVGGRMYAGTEREFVTQQAVFSRQGVDRILKYAFELAMSRPKKHLTSATKSNGISISMPYWDERVKAMAAQYPQVKTDWFHIDILCAHFVMHPDWFDVVVGSNLFGDILSDLGPAATGTIGIAPSANINPERHHPSLFEPVHGSAPDIYGRNIANPVGQIWSGAMMLDHLGCPEAGAAVVKAIETVLQQGPKTPDLGGKARTSDLGKAIAEVL

Samples

Sample ID Description Type Environment
1 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
2 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
3 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
4 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
5 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
60 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
107 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
108 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
109 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
110 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
111 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
116 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
117 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
118 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
119 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
120 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
121 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
122 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
123 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
124 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
125 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
126 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
127 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
128 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
129 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
130 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
131 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
132 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
133 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
136 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
137 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
138 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
139 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
140 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
141 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
142 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
143 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
144 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
145 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
146 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
147 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
148 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
149 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
150 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
151 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
152 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
153 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
154 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
155 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
156 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
157 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
158 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
159 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
160 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
161 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
162 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
163 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
164 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
165 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
166 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
167 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
168 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
169 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
170 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
171 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
172 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
173 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
174 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
175 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
176 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
177 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
178 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
179 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
180 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
181 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
182 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
184 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
192 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
193 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
194 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
195 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
196 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
197 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
198 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
199 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
200 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
201 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
202 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.49
Metatranscriptomes 0.36
Isolates 2.15

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 7.17
Nodule 1.08
Rhizoplane 2.15
Rhizosphere 82.08
Stem 0
Stem Tuber 0
Unclassified 7.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1001726 3300002987 Bacteria 8823
2 JGI25406J46586_10022249 3300003203 Bacteria 2530
3 JGI25160J50197_1000095 3300003354 Bacteria 88326
4 JGI25160J50197_1000857 3300003354 Bacteria 16143
5 JGI25161J50226_1000071 3300003374 Bacteria 88326
6 Ga0055540_1000558 3300003792 Bacteria 27496
7 Ga0055543_1000206 3300004625 Bacteria 47744
8 Ga0055543_1000457 3300004625 Bacteria 24202
9 Ga0065165_1000408 3300005262 Bacteria 68789
10 Ga0065165_1002383 3300005262 Bacteria 16162
11 Ga0070658_10031203 3300005327 Bacteria 4279
12 Ga0070658_10208859 3300005327 Bacteria 1649
13 Ga0070676_10069732 3300005328 Bacteria 2107
14 Ga0070690_100104421 3300005330 Bacteria 1882
15 Ga0070670_100193593 3300005331 Bacteria 1766
16 Ga0070670_100317516 3300005331 Bacteria 1364
17 Ga0070677_10018574 3300005333 Bacteria 2505
18 Ga0070677_10053966 3300005333 Bacteria 1636
19 Ga0068869_100203146 3300005334 Bacteria 1563
20 Ga0068868_100052143 3300005338 Bacteria 3220
21 Ga0068868_100189115 3300005338 Bacteria 1712
22 Ga0070660_100193507 3300005339 Bacteria 1648
23 Ga0070671_100008521 3300005355 Bacteria 8219
24 Ga0070671_100130657 3300005355 Bacteria 2115
25 Ga0070674_100049280 3300005356 Bacteria 2895
26 Ga0070673_100158921 3300005364 Bacteria 1920
27 Ga0070659_100182036 3300005366 Bacteria 1725
28 Ga0070667_100149556 3300005367 Bacteria 2050
29 Ga0070667_100226269 3300005367 Bacteria 1666
30 Ga0070701_10050293 3300005438 Bacteria 2157
31 Ga0070678_100276724 3300005456 Bacteria 1418
32 Ga0070681_10007554 3300005458 Bacteria 10621
33 Ga0070681_10181372 3300005458 Bacteria 2027
34 Ga0068867_100024207 3300005459 Bacteria 4350
35 Ga0070706_100000341 3300005467 Bacteria 56333
36 Ga0070706_100004383 3300005467 Bacteria 13637
37 Ga0070707_100065071 3300005468 Bacteria 3501
38 Ga0070698_100179276 3300005471 Bacteria 2057
39 Ga0070679_100142867 3300005530 Bacteria 2372
40 Ga0068853_100042844 3300005539 Bacteria 3872
41 Ga0068853_100202278 3300005539 Bacteria 1808
42 Ga0068853_100312674 3300005539 Bacteria 1455
43 Ga0070672_100125446 3300005543 Bacteria 2105
44 Ga0070665_100478411 3300005548 Bacteria 1256
45 Ga0070704_100136515 3300005549 Bacteria 1909
46 Ga0068855_100248814 3300005563 Bacteria 1983
47 Ga0068854_100002003 3300005578 Bacteria 12480
48 Ga0068856_100124937 3300005614 Bacteria 2576
49 Ga0068863_100041883 3300005841 Bacteria 4353
50 Ga0068862_100077627 3300005844 Bacteria 2876
51 Ga0070715_10057479 3300006163 Bacteria 1695
52 Ga0097621_100263544 3300006237 Bacteria 1512
53 Ga0075370_10028418 3300006353 Bacteria 3109
54 Ga0068871_100132372 3300006358 Bacteria 2115
55 Ga0075428_100000103 3300006844 Bacteria 71205
56 Ga0075430_100027093 3300006846 Bacteria 4872
57 Ga0075431_100048012 3300006847 Bacteria 4403
58 Ga0075429_100081227 3300006880 Bacteria 2826
59 Ga0068865_100031849 3300006881 Bacteria 3519
60 Ga0099795_10010900 3300007788 Bacteria 2695
61 Ga0105240_10089356 3300009093 Bacteria 3768
62 Ga0111539_10000527 3300009094 Bacteria 48473
63 Ga0105245_10026416 3300009098 Bacteria 5110
64 Ga0105245_10034163 3300009098 Bacteria 4509
65 Ga0105245_10173690 3300009098 Bacteria 2054
66 Ga0114129_10443753 3300009147 Bacteria 1703
67 Ga0105243_10048757 3300009148 Bacteria 3340
68 Ga0105248_10434027 3300009177 Bacteria 1479
69 Ga0099796_10008059 3300010159 Bacteria 2790
70 Ga0157314_1001275 3300012500 Bacteria 1838
71 Ga0157370_10010502 3300013104 Bacteria 9752
72 Ga0157374_10091241 3300013296 Bacteria 2905
73 Ga0157374_10326678 3300013296 Bacteria 1521
74 Ga0157378_10066014 3300013297 Bacteria 3240
75 Ga0157375_10033889 3300013308 Bacteria 4858
76 Ga0157375_10203506 3300013308 Bacteria 2136
77 Ga0157375_10298993 3300013308 Bacteria 1773
78 Ga0157376_10035751 3300014969 Bacteria 4020
79 Ga0157376_10105221 3300014969 Bacteria 2474
80 Ga0213875_10003324 3300021388 Bacteria 9187
81 Ga0207666_1005802 3300025271 Bacteria 1585
82 Ga0209130_1000180 3300025284 Bacteria 89520
83 Ga0209758_1000918 3300025297 Bacteria 39844
84 Ga0209050_1004251 3300025298 Bacteria 9838
85 Ga0207426_1000017 3300025302 Bacteria 577913
86 Ga0207426_1000744 3300025302 Bacteria 36633
87 Ga0209051_1000850 3300025303 Bacteria 31150
88 Ga0209257_1007703 3300025304 Bacteria 6424
89 Ga0207682_10000809 3300025893 Bacteria 14477
90 Ga0207642_10001179 3300025899 Bacteria 8057
91 Ga0207688_10001596 3300025901 Bacteria 11962
92 Ga0207645_10003935 3300025907 Bacteria 11096
93 Ga0207643_10145914 3300025908 Bacteria 1416
94 Ga0207705_10213522 3300025909 Bacteria 1464
95 Ga0207684_10000017 3300025910 Bacteria 385006
96 Ga0207684_10061797 3300025910 Bacteria 3181
97 Ga0207707_10016054 3300025912 Bacteria 6530
98 Ga0207695_10116735 3300025913 Bacteria 2642
99 Ga0207663_10030885 3300025916 Bacteria 3164
100 Ga0207657_10189004 3300025919 Bacteria 1663
101 Ga0207649_10022706 3300025920 Bacteria 3625
102 Ga0207650_10149609 3300025925 Bacteria 1841
103 Ga0207687_10014546 3300025927 Bacteria 5152
104 Ga0207644_10051466 3300025931 Bacteria 2956
105 Ga0207644_10098943 3300025931 Bacteria 2187
106 Ga0207669_10019478 3300025937 Bacteria 3534
107 Ga0207704_10033778 3300025938 Bacteria 2912
108 Ga0207704_10038451 3300025938 Bacteria 2775
109 Ga0207665_10167690 3300025939 Bacteria 1584
110 Ga0207691_10003617 3300025940 Bacteria 15002
111 Ga0207691_10061977 3300025940 Bacteria 3396
112 Ga0207711_10038177 3300025941 Bacteria 4082
113 Ga0207711_10370604 3300025941 Bacteria 1328
114 Ga0207689_10031947 3300025942 Bacteria 4378
115 Ga0207679_10145298 3300025945 Bacteria 1923
116 Ga0207667_10203849 3300025949 Bacteria 2029
117 Ga0207658_10167833 3300025986 Bacteria 1805
118 Ga0207639_10082384 3300026041 Bacteria 2550
119 Ga0207708_10001683 3300026075 Bacteria 16380
120 Ga0207648_10301313 3300026089 Bacteria 1437
121 Ga0207675_100013738 3300026118 Bacteria 7554
122 Ga0207683_10029492 3300026121 Bacteria 4751
123 Ga0207683_10041129 3300026121 Bacteria 4035
124 Ga0207428_10006385 3300027907 Bacteria 10893
125 Ga0268266_10020998 3300028379 Bacteria 5566
126 Ga0268266_10286843 3300028379 Bacteria 1532
127 Ga0268264_10226307 3300028381 Bacteria 1724
128 Ga0265318_10014614 3300028577 Bacteria 3292
129 Ga0265330_10004873 3300031235 Bacteria 6763
130 Ga0265332_10000715 3300031238 Bacteria 20998
131 Ga0265320_10023328 3300031240 Bacteria 3295
132 Ga0265329_10033781 3300031242 Bacteria 1653
133 Ga0265331_10001901 3300031250 Bacteria 14645
134 Ga0265331_10015104 3300031250 Bacteria 4088
135 Ga0265327_10000439 3300031251 Bacteria 75504
136 Ga0265316_10009147 3300031344 Bacteria 9128
137 Ga0307408_100014266 3300031548 Bacteria 5279
138 Ga0316575_10000146 3300031665 Bacteria 17925
139 Ga0316575_10000481 3300031665 Bacteria 11538
140 Ga0316579_10018035 3300031691 Bacteria 3102
141 Ga0316579_10026121 3300031691 Bacteria 2641
142 Ga0265314_10000980 3300031711 Bacteria 33564
143 Ga0316576_10000890 3300031727 Bacteria 15213
144 Ga0316576_10000963 3300031727 Bacteria 14774
145 Ga0316576_10011074 3300031727 Bacteria 5889
146 Ga0316576_10021577 3300031727 Bacteria 4457
147 Ga0316576_10025964 3300031727 Bacteria 4105
148 Ga0316576_10043326 3300031727 Bacteria 3247
149 Ga0316576_10053511 3300031727 Bacteria 2941
150 Ga0316578_10002139 3300031728 Bacteria 8499
151 Ga0316578_10008320 3300031728 Bacteria 5272
152 Ga0316578_10015162 3300031728 Bacteria 4138
153 Ga0316578_10038284 3300031728 Bacteria 2765
154 Ga0316578_10039957 3300031728 Bacteria 2710
155 Ga0316578_10046461 3300031728 Bacteria 2531
156 Ga0316578_10063205 3300031728 Bacteria 2183
157 Ga0316577_10001755 3300031733 Bacteria 10449
158 Ga0316577_10056163 3300031733 Bacteria 2197
159 Ga0316577_10097965 3300031733 Bacteria 1643
160 Ga0307415_100077216 3300032126 Bacteria 2364
161 Ga0316583_10007538 3300032133 Bacteria 3919
162 Ga0316583_10007775 3300032133 Bacteria 3866
163 Ga0316583_10034123 3300032133 Bacteria 1805
164 Ga0316585_10001180 3300032137 Bacteria 6817
165 Ga0316585_10022145 3300032137 Bacteria 1954
166 Ga0316580_10001415 3300032139 Bacteria 6249
167 Ga0316580_10012779 3300032139 Bacteria 2558
168 Ga0316596_1004000 3300033541 Bacteria 3269
169 Ga0373956_0026185 3300035119 Bacteria 2526
170 Ga0373956_0071633 3300035119 Bacteria 1582
171 Ga0316574_0002680 3300035398 Bacteria 8996
172 Ga0316574_0007450 3300035398 Bacteria 6000
173 Ga0316574_0230146 3300035398 Bacteria 1186
174 Ga0373933_0042866 3300035724 Bacteria 2675
175 Ga0373947_0334718 3300035725 Bacteria 1014
176 Ga0373937_0000761 3300036401 Bacteria 27843
177 Ga0373937_0053712 3300036401 Bacteria 3695
178 Ga0373937_0099680 3300036401 Bacteria 2694
179 Ga0316582_0002223 3300036647 Bacteria 9011
180 Ga0316582_0005655 3300036647 Bacteria 6469
181 Ga0316582_0007113 3300036647 Bacteria 5943
182 Ga0316582_0028286 3300036647 Bacteria 3394
183 Ga0316582_0061218 3300036647 Bacteria 2414
184 Ga0316582_0090896 3300036647 Bacteria 2009
185 Ga0316582_0123677 3300036647 Bacteria 1733
186 Ga0316584_0012182 3300036712 Bacteria 6060
187 Ga0316584_0028555 3300036712 Bacteria 4115
188 Ga0316584_0028936 3300036712 Bacteria 4089
189 Ga0316584_0101426 3300036712 Bacteria 2155
190 Ga0316584_0168937 3300036712 Bacteria 1623
191 Ga0373925_0086030 3300037068 Bacteria 2397
192 Ga0395898_0033653 3300037466 Bacteria 5112
193 Ga0436364_0225297 3300037853 Bacteria 15472
194 Ga0436364_0707841 3300037853 Bacteria 1394
195 Ga0400483_012411 3300039062 Bacteria 7359
196 Ga0400483_259006 3300039062 Bacteria 11660
197 Ga0436365_0858581 3300039437 Bacteria 2499
198 Ga0436365_1245607 3300039437 Bacteria 3332
199 Ga0436360_1268137 3300039438 Bacteria 3719
200 Ga0436361_0835809 3300039447 Bacteria 3462
201 Ga0451833_0417608 3300041491 Bacteria 4658
202 Ga0451835_0551986 3300041492 Bacteria 11151
203 Ga0451837_0045842 3300041494 Bacteria 2602
204 Ga0451839_0024467 3300041496 Bacteria 8285
205 Ga0451845_0056956 3300041501 Bacteria 4682
206 Ga0451847_0355038 3300041503 Bacteria 5983
207 Ga0451849_0180214 3300041505 Bacteria 6323
208 Ga0451851_0952236 3300041507 Bacteria 9071
209 Ga0451843_0025864 3300041509 Bacteria 12096
210 Ga0451855_1133536 3300041511 Bacteria 8875
211 Ga0453684_0550039 3300044712 Bacteria 1272
212 Ga0466967_0325919 3300045976 Bacteria 1482
213 Ga0495592_0109808 3300046454 Bacteria 1953
214 Ga0495638_0019488 3300046460 Bacteria 4488
215 Ga0495653_0015948 3300046463 Bacteria 6125
216 Ga0495653_0072186 3300046463 Bacteria 2578
217 Ga0495664_0003048 3300046477 Bacteria 9072
218 Ga0495664_0081034 3300046477 Bacteria 1946
219 Ga0495608_0010040 3300046511 Bacteria 6604
220 Ga0495608_0030606 3300046511 Bacteria 3643
221 Ga0495608_0031054 3300046511 Bacteria 3614
222 Ga0495610_0063221 3300046512 Bacteria 1754
223 Ga0495643_0024163 3300046522 Bacteria 3449
224 Ga0495652_0038022 3300046529 Bacteria 4172
225 Ga0495640_0013010 3300046533 Bacteria 6339
226 Ga0495587_0003972 3300046536 Bacteria 9806
227 Ga0495587_0009561 3300046536 Bacteria 6206
228 Ga0495645_0000909 3300046543 Bacteria 20159
229 Ga0495645_0026353 3300046543 Bacteria 4219
230 Ga0495667_0031332 3300046559 Bacteria 3569
231 Ga0495635_0022961 3300046663 Bacteria 4348
232 Ga0495599_0006436 3300046678 Bacteria 7084
233 Ga0495623_0029858 3300046679 Bacteria 3508
234 Ga0495646_0060551 3300046680 Bacteria 2257
235 Ga0495649_0044450 3300046694 Bacteria 2425
236 Ga0495600_0213106 3300046809 Bacteria 1237
237 Ga0495604_0016624 3300047317 Bacteria 5884
238 Ga0495680_0023600 3300047322 Bacteria 5112
239 Ga0495675_0008949 3300047444 Bacteria 6225
240 Ga0495684_0027124 3300047471 Bacteria 4398
241 Ga0495686_0177039 3300047472 Bacteria 1238
242 Ga0495602_0000398 3300048088 Bacteria 40599
243 Ga0496106_0076315 3300048909 Bacteria 2569
244 Ga0496108_0047374 3300048911 Bacteria 3593
245 Ga0496110_0001672 3300048913 Bacteria 16272
246 Ga0496112_0516126 3300048915 Bacteria 1130
247 Ga0496114_0349876 3300048917 Bacteria 1307
248 Ga0496114_0424112 3300048917 Bacteria 1178
249 Ga0496121_0076365 3300048924 Bacteria 2671
250 Ga0501037_0241752 3300049573 Bacteria 1265
251 Ga0501039_0214734 3300049575 Bacteria 1513
252 Ga0501040_0000134 3300049576 Bacteria 39560
253 Ga0501041_0001689 3300049577 Bacteria 12365
254 Ga0501042_0000017 3300049578 Bacteria 51241
255 Ga0501043_0183023 3300049579 Bacteria 1632
256 Ga0501046_0029244 3300049580 Bacteria 4481
257 Ga0501080_0023064 3300049742 Bacteria 5771
258 Ga0501080_0300181 3300049742 Bacteria 1457
259 Ga0501044_0382145 3300049823 Bacteria 1323
260 Ga0501044_0519096 3300049823 Bacteria 1091
261 nmdc:mga05p37_229865_c1 3300050507 Bacteria 2235
262 nmdc:mga05p37_501249_c1 3300050507 Bacteria 1393
263 nmdc:mga09592_72563_c1 3300050508 Bacteria 2923
264 nmdc:mga0qj67_13737_c1 3300050509 Bacteria 6111
265 nmdc:mga06r32_38797_c1 3300050510 Bacteria 4516
266 nmdc:mga08y16_1314_c1 3300050511 Bacteria 24693
267 Ga0495601_0000712 3300053077 Bacteria 17859
268 Ga0495601_0025203 3300053077 Bacteria 3666
269 Ga0495612_0001184 3300053078 Bacteria 10747
270 Ga0500568_0000070 3300053139 Bacteria 99663
271 Ga0500622_0000290 3300053156 Bacteria 51286
272 Ga0500627_0150532 3300053158 Bacteria 1051
273 Ga0501082_0002319 3300060353 Bacteria 16650

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053158 Ga0500627_0150532 Ga0500627_0150532_92_1015 295
2 3300035725 Ga0373947_0334718 Ga0373947_0334718_71_967 297
3 3300039437 Ga0436365_1245607 Ga0436365_1245607_2406_3314 297
4 3300036712 Ga0316584_0101426 Ga0316584_0101426_32_979 315
5 3300046663 Ga0495635_0022961 Ga0495635_0022961_2210_3202 329
6 3300048917 Ga0496114_0424112 Ga0496114_0424112_21_1025 334
7 3300037466 Ga0395898_0033653 Ga0395898_0033653_952_2037 342
8 3300007788 Ga0099795_10010900 Ga0099795_100109002 344
9 3300050507 nmdc:mga05p37_501249_c1 nmdc:mga05p37_501249_c1_337_1377 344
10 3300003203 JGI25406J46586_10022249 JGI25406J46586_100222492 346
11 3300036647 Ga0316582_0061218 Ga0316582_0061218_322_1380 349
12 3300046460 Ga0495638_0019488 Ga0495638_0019488_3364_4449 349
13 3300053139 Ga0500568_0000070 Ga0500568_0000070_7315_8400 349
14 3300031665 Ga0316575_10000481 Ga0316575_100004812 350
15 3300031691 Ga0316579_10026121 Ga0316579_100261213 350
16 3300031727 Ga0316576_10000890 Ga0316576_1000089013 350
17 3300031727 Ga0316576_10000963 Ga0316576_1000096312 350
18 3300031727 Ga0316576_10011074 Ga0316576_100110746 350
19 3300031727 Ga0316576_10021577 Ga0316576_100215774 350
20 3300031727 Ga0316576_10025964 Ga0316576_100259642 350
21 3300031727 Ga0316576_10053511 Ga0316576_100535112 350
22 3300031728 Ga0316578_10002139 Ga0316578_100021397 350
23 3300031728 Ga0316578_10008320 Ga0316578_100083202 350
24 3300031728 Ga0316578_10015162 Ga0316578_100151624 350
25 3300031728 Ga0316578_10038284 Ga0316578_100382842 350
26 3300031728 Ga0316578_10046461 Ga0316578_100464612 350
27 3300031728 Ga0316578_10063205 Ga0316578_100632052 350
28 3300031733 Ga0316577_10001755 Ga0316577_100017554 350
29 3300031733 Ga0316577_10097965 Ga0316577_100979651 350
30 3300032133 Ga0316583_10007538 Ga0316583_100075382 350
31 3300032137 Ga0316585_10001180 Ga0316585_100011805 350
32 3300032137 Ga0316585_10022145 Ga0316585_100221452 350
33 3300032139 Ga0316580_10001415 Ga0316580_100014154 350
34 3300032139 Ga0316580_10012779 Ga0316580_100127791 350
35 3300033541 Ga0316596_1004000 Ga0316596_10040004 350
36 3300035398 Ga0316574_0002680 Ga0316574_0002680_6078_7139 350
37 3300035398 Ga0316574_0007450 Ga0316574_0007450_3288_4361 350
38 3300035398 Ga0316574_0230146 Ga0316574_0230146_35_1087 350
39 3300036647 Ga0316582_0002223 Ga0316582_0002223_4938_6011 350
40 3300036647 Ga0316582_0005655 Ga0316582_0005655_4348_5421 350
41 3300036647 Ga0316582_0028286 Ga0316582_0028286_312_1373 350
42 3300036712 Ga0316584_0012182 Ga0316584_0012182_1771_2832 350
43 3300036712 Ga0316584_0028936 Ga0316584_0028936_659_1720 350
44 3300039062 Ga0400483_012411 Ga0400483_012411_1590_2645 350
45 3300039062 Ga0400483_259006 Ga0400483_259006_9426_10481 350
46 iso_pu_bacteria 2974315732 2974318412 350
47 iso_pu_bacteria 2984523437 2984526621 350
48 3300005467 Ga0070706_100000341 Ga0070706_10000034155 351
49 3300005468 Ga0070707_100065071 Ga0070707_1000650713 351
50 3300006881 Ga0068865_100031849 Ga0068865_1000318493 351
51 3300009098 Ga0105245_10034163 Ga0105245_100341632 351
52 3300010159 Ga0099796_10008059 Ga0099796_100080593 351
53 3300013296 Ga0157374_10091241 Ga0157374_100912413 351
54 3300013308 Ga0157375_10033889 Ga0157375_100338895 351
55 3300014969 Ga0157376_10105221 Ga0157376_101052212 351
56 3300021388 Ga0213875_10003324 Ga0213875_100033246 351
57 3300025910 Ga0207684_10000017 Ga0207684_10000017234 351
58 3300025927 Ga0207687_10014546 Ga0207687_100145461 351
59 3300025938 Ga0207704_10038451 Ga0207704_100384512 351
60 3300028381 Ga0268264_10226307 Ga0268264_102263072 351
61 3300032133 Ga0316583_10034123 Ga0316583_100341232 351
62 3300035119 Ga0373956_0071633 Ga0373956_0071633_513_1568 351
63 3300036647 Ga0316582_0123677 Ga0316582_0123677_210_1274 351
64 3300036712 Ga0316584_0168937 Ga0316584_0168937_13_1077 351
65 3300037853 Ga0436364_0225297 Ga0436364_0225297_12389_13468 351
66 3300039437 Ga0436365_0858581 Ga0436365_0858581_101_1156 351
67 3300039438 Ga0436360_1268137 Ga0436360_1268137_72_1127 351
68 3300044712 Ga0453684_0550039 Ga0453684_0550039_91_1146 351
69 3300046463 Ga0495653_0072186 Ga0495653_0072186_544_1599 351
70 3300046477 Ga0495664_0081034 Ga0495664_0081034_97_1152 351
71 3300046511 Ga0495608_0030606 Ga0495608_0030606_1415_2470 351
72 3300046529 Ga0495652_0038022 Ga0495652_0038022_1340_2395 351
73 3300046536 Ga0495587_0009561 Ga0495587_0009561_807_1862 351
74 3300046543 Ga0495645_0000909 Ga0495645_0000909_14754_15809 351
75 3300046679 Ga0495623_0029858 Ga0495623_0029858_1421_2476 351
76 3300047471 Ga0495684_0027124 Ga0495684_0027124_2578_3633 351
77 3300049576 Ga0501040_0000134 Ga0501040_0000134_15860_16921 351
78 3300049578 Ga0501042_0000017 Ga0501042_0000017_7159_8220 351
79 3300049742 Ga0501080_0300181 Ga0501080_0300181_362_1426 351
80 3300053077 Ga0495601_0025203 Ga0495601_0025203_964_2019 351
81 3300005327 Ga0070658_10031203 Ga0070658_100312033 352
82 3300005327 Ga0070658_10208859 Ga0070658_102088592 352
83 3300005328 Ga0070676_10069732 Ga0070676_100697321 352
84 3300005330 Ga0070690_100104421 Ga0070690_1001044211 352
85 3300005331 Ga0070670_100193593 Ga0070670_1001935931 352
86 3300005331 Ga0070670_100317516 Ga0070670_1003175161 352
87 3300005333 Ga0070677_10018574 Ga0070677_100185742 352
88 3300005333 Ga0070677_10053966 Ga0070677_100539661 352
89 3300005334 Ga0068869_100203146 Ga0068869_1002031461 352
90 3300005338 Ga0068868_100052143 Ga0068868_1000521432 352
91 3300005338 Ga0068868_100189115 Ga0068868_1001891151 352
92 3300005355 Ga0070671_100008521 Ga0070671_1000085211 352
93 3300005355 Ga0070671_100130657 Ga0070671_1001306571 352
94 3300005356 Ga0070674_100049280 Ga0070674_1000492801 352
95 3300005364 Ga0070673_100158921 Ga0070673_1001589211 352
96 3300005367 Ga0070667_100149556 Ga0070667_1001495562 352
97 3300005367 Ga0070667_100226269 Ga0070667_1002262692 352
98 3300005438 Ga0070701_10050293 Ga0070701_100502931 352
99 3300005456 Ga0070678_100276724 Ga0070678_1002767241 352
100 3300005458 Ga0070681_10007554 Ga0070681_100075543 352
101 3300005459 Ga0068867_100024207 Ga0068867_1000242072 352
102 3300005467 Ga0070706_100004383 Ga0070706_10000438311 352
103 3300005530 Ga0070679_100142867 Ga0070679_1001428672 352
104 3300005539 Ga0068853_100042844 Ga0068853_1000428442 352
105 3300005539 Ga0068853_100202278 Ga0068853_1002022782 352
106 3300005539 Ga0068853_100312674 Ga0068853_1003126742 352
107 3300005543 Ga0070672_100125446 Ga0070672_1001254463 352
108 3300005548 Ga0070665_100478411 Ga0070665_1004784111 352
109 3300005549 Ga0070704_100136515 Ga0070704_1001365153 352
110 3300005578 Ga0068854_100002003 Ga0068854_1000020031 352
111 3300005614 Ga0068856_100124937 Ga0068856_1001249373 352
112 3300005841 Ga0068863_100041883 Ga0068863_1000418832 352
113 3300005844 Ga0068862_100077627 Ga0068862_1000776272 352
114 3300006163 Ga0070715_10057479 Ga0070715_100574792 352
115 3300006237 Ga0097621_100263544 Ga0097621_1002635441 352
116 3300006358 Ga0068871_100132372 Ga0068871_1001323721 352
117 3300006844 Ga0075428_100000103 Ga0075428_10000010326 352
118 3300006846 Ga0075430_100027093 Ga0075430_1000270932 352
119 3300006847 Ga0075431_100048012 Ga0075431_1000480122 352
120 3300006880 Ga0075429_100081227 Ga0075429_1000812275 352
121 3300009094 Ga0111539_10000527 Ga0111539_100005272 352
122 3300009098 Ga0105245_10026416 Ga0105245_100264165 352
123 3300009098 Ga0105245_10173690 Ga0105245_101736902 352
124 3300009147 Ga0114129_10443753 Ga0114129_104437532 352
125 3300009148 Ga0105243_10048757 Ga0105243_100487572 352
126 3300009177 Ga0105248_10434027 Ga0105248_104340271 352
127 3300013296 Ga0157374_10326678 Ga0157374_103266781 352
128 3300013297 Ga0157378_10066014 Ga0157378_100660143 352
129 3300013308 Ga0157375_10203506 Ga0157375_102035061 352
130 3300013308 Ga0157375_10298993 Ga0157375_102989931 352
131 3300014969 Ga0157376_10035751 Ga0157376_100357513 352
132 3300025271 Ga0207666_1005802 Ga0207666_10058021 352
133 3300025893 Ga0207682_10000809 Ga0207682_1000080912 352
134 3300025899 Ga0207642_10001179 Ga0207642_100011799 352
135 3300025901 Ga0207688_10001596 Ga0207688_1000159611 352
136 3300025907 Ga0207645_10003935 Ga0207645_1000393515 352
137 3300025908 Ga0207643_10145914 Ga0207643_101459141 352
138 3300025909 Ga0207705_10213522 Ga0207705_102135221 352
139 3300025910 Ga0207684_10061797 Ga0207684_100617972 352
140 3300025912 Ga0207707_10016054 Ga0207707_100160546 352
141 3300025916 Ga0207663_10030885 Ga0207663_100308853 352
142 3300025920 Ga0207649_10022706 Ga0207649_100227062 352
143 3300025925 Ga0207650_10149609 Ga0207650_101496091 352
144 3300025931 Ga0207644_10051466 Ga0207644_100514663 352
145 3300025931 Ga0207644_10098943 Ga0207644_100989431 352
146 3300025937 Ga0207669_10019478 Ga0207669_100194781 352
147 3300025938 Ga0207704_10033778 Ga0207704_100337783 352
148 3300025939 Ga0207665_10167690 Ga0207665_101676901 352
149 3300025940 Ga0207691_10003617 Ga0207691_1000361712 352
150 3300025940 Ga0207691_10061977 Ga0207691_100619771 352
151 3300025941 Ga0207711_10038177 Ga0207711_100381772 352
152 3300025941 Ga0207711_10370604 Ga0207711_103706041 352
153 3300025942 Ga0207689_10031947 Ga0207689_100319472 352
154 3300025945 Ga0207679_10145298 Ga0207679_101452982 352
155 3300025986 Ga0207658_10167833 Ga0207658_101678332 352
156 3300026041 Ga0207639_10082384 Ga0207639_100823842 352
157 3300026075 Ga0207708_10001683 Ga0207708_1000168322 352
158 3300026089 Ga0207648_10301313 Ga0207648_103013131 352
159 3300026118 Ga0207675_100013738 Ga0207675_1000137386 352
160 3300026121 Ga0207683_10029492 Ga0207683_100294921 352
161 3300026121 Ga0207683_10041129 Ga0207683_100411293 352
162 3300027907 Ga0207428_10006385 Ga0207428_100063852 352
163 3300028379 Ga0268266_10020998 Ga0268266_100209982 352
164 3300028379 Ga0268266_10286843 Ga0268266_102868432 352
165 3300028577 Ga0265318_10014614 Ga0265318_100146143 352
166 3300031235 Ga0265330_10004873 Ga0265330_100048736 352
167 3300031238 Ga0265332_10000715 Ga0265332_1000071524 352
168 3300031240 Ga0265320_10023328 Ga0265320_100233282 352
169 3300031242 Ga0265329_10033781 Ga0265329_100337811 352
170 3300031250 Ga0265331_10001901 Ga0265331_1000190112 352
171 3300031250 Ga0265331_10015104 Ga0265331_100151043 352
172 3300031251 Ga0265327_10000439 Ga0265327_1000043937 352
173 3300031344 Ga0265316_10009147 Ga0265316_100091472 352
174 3300031548 Ga0307408_100014266 Ga0307408_1000142664 352
175 3300031711 Ga0265314_10000980 Ga0265314_1000098011 352
176 3300032126 Ga0307415_100077216 Ga0307415_1000772162 352
177 3300035119 Ga0373956_0026185 Ga0373956_0026185_306_1376 352
178 3300035724 Ga0373933_0042866 Ga0373933_0042866_731_1801 352
179 3300036401 Ga0373937_0000761 Ga0373937_0000761_18315_19385 352
180 3300036401 Ga0373937_0053712 Ga0373937_0053712_1126_2196 352
181 3300036401 Ga0373937_0099680 Ga0373937_0099680_1435_2505 352
182 3300037068 Ga0373925_0086030 Ga0373925_0086030_281_1351 352
183 3300037853 Ga0436364_0707841 Ga0436364_0707841_43_1113 352
184 3300039447 Ga0436361_0835809 Ga0436361_0835809_1069_2139 352
185 3300046454 Ga0495592_0109808 Ga0495592_0109808_58_1128 352
186 3300046463 Ga0495653_0015948 Ga0495653_0015948_2906_3976 352
187 3300046477 Ga0495664_0003048 Ga0495664_0003048_1246_2316 352
188 3300046511 Ga0495608_0010040 Ga0495608_0010040_3877_4947 352
189 3300046511 Ga0495608_0031054 Ga0495608_0031054_1658_2728 352
190 3300046533 Ga0495640_0013010 Ga0495640_0013010_1774_2844 352
191 3300046536 Ga0495587_0003972 Ga0495587_0003972_7104_8174 352
192 3300046543 Ga0495645_0026353 Ga0495645_0026353_2638_3708 352
193 3300046559 Ga0495667_0031332 Ga0495667_0031332_1674_2744 352
194 3300046678 Ga0495599_0006436 Ga0495599_0006436_2020_3090 352
195 3300046680 Ga0495646_0060551 Ga0495646_0060551_1089_2159 352
196 3300046809 Ga0495600_0213106 Ga0495600_0213106_14_1084 352
197 3300047317 Ga0495604_0016624 Ga0495604_0016624_2463_3533 352
198 3300047322 Ga0495680_0023600 Ga0495680_0023600_2531_3601 352
199 3300047444 Ga0495675_0008949 Ga0495675_0008949_5134_6204 352
200 3300048088 Ga0495602_0000398 Ga0495602_0000398_10541_11611 352
201 3300048909 Ga0496106_0076315 Ga0496106_0076315_1159_2331 352
202 3300048911 Ga0496108_0047374 Ga0496108_0047374_2495_3553 352
203 3300048913 Ga0496110_0001672 Ga0496110_0001672_13209_14267 352
204 3300049573 Ga0501037_0241752 Ga0501037_0241752_161_1219 352
205 3300049575 Ga0501039_0214734 Ga0501039_0214734_56_1114 352
206 3300049577 Ga0501041_0001689 Ga0501041_0001689_9045_10103 352
207 3300049579 Ga0501043_0183023 Ga0501043_0183023_175_1233 352
208 3300049580 Ga0501046_0029244 Ga0501046_0029244_2003_3061 352
209 3300049742 Ga0501080_0023064 Ga0501080_0023064_659_1717 352
210 3300049823 Ga0501044_0382145 Ga0501044_0382145_154_1212 352
211 3300049823 Ga0501044_0519096 Ga0501044_0519096_13_1071 352
212 3300050507 nmdc:mga05p37_229865_c1 nmdc:mga05p37_229865_c1_113_1171 352
213 3300050508 nmdc:mga09592_72563_c1 nmdc:mga09592_72563_c1_19_1077 352
214 3300050509 nmdc:mga0qj67_13737_c1 nmdc:mga0qj67_13737_c1_1456_2514 352
215 3300050510 nmdc:mga06r32_38797_c1 nmdc:mga06r32_38797_c1_3171_4229 352
216 3300050511 nmdc:mga08y16_1314_c1 nmdc:mga08y16_1314_c1_4682_5740 352
217 3300053077 Ga0495601_0000712 Ga0495601_0000712_11586_12656 352
218 3300053078 Ga0495612_0001184 Ga0495612_0001184_2935_4005 352
219 3300060353 Ga0501082_0002319 Ga0501082_0002319_7087_8145 352
220 iso_pu_bacteria 2765235942 2766067093 352
221 iso_pu_bacteria 2841851746 2841856699 352
222 iso_pu_bacteria 8018127388 8018131624 352
223 3300005339 Ga0070660_100193507 Ga0070660_1001935072 353
224 3300005366 Ga0070659_100182036 Ga0070659_1001820362 353
225 3300005458 Ga0070681_10181372 Ga0070681_101813721 353
226 3300005563 Ga0068855_100248814 Ga0068855_1002488142 353
227 3300025919 Ga0207657_10189004 Ga0207657_101890042 353
228 3300025949 Ga0207667_10203849 Ga0207667_102038492 353
229 3300036712 Ga0316584_0028555 Ga0316584_0028555_293_1414 353
230 3300045976 Ga0466967_0325919 Ga0466967_0325919_403_1467 353
231 3300048915 Ga0496112_0516126 Ga0496112_0516126_31_1095 353
232 3300006353 Ga0075370_10028418 Ga0075370_100284183 354
233 3300009093 Ga0105240_10089356 Ga0105240_100893562 354
234 3300013104 Ga0157370_10010502 Ga0157370_1001050210 354
235 3300025913 Ga0207695_10116735 Ga0207695_101167352 354
236 3300031727 Ga0316576_10043326 Ga0316576_100433265 354
237 iso_pu_bacteria 3003665799 3003669434 354
238 3300005471 Ga0070698_100179276 Ga0070698_1001792762 355
239 3300031665 Ga0316575_10000146 Ga0316575_1000014615 355
240 3300031691 Ga0316579_10018035 Ga0316579_100180352 355
241 3300031728 Ga0316578_10039957 Ga0316578_100399572 355
242 3300031733 Ga0316577_10056163 Ga0316577_100561632 355
243 3300032133 Ga0316583_10007775 Ga0316583_100077752 355
244 3300036647 Ga0316582_0007113 Ga0316582_0007113_4702_5808 355
245 3300036647 Ga0316582_0090896 Ga0316582_0090896_301_1380 355
246 3300003354 JGI25160J50197_1000857 JGI25160J50197_100085714 356
247 3300003792 Ga0055540_1000558 Ga0055540_10005587 356
248 3300004625 Ga0055543_1000457 Ga0055543_100045723 356
249 3300005262 Ga0065165_1002383 Ga0065165_10023832 356
250 3300012500 Ga0157314_1001275 Ga0157314_10012752 356
251 3300025297 Ga0209758_1000918 Ga0209758_10009183 356
252 3300025298 Ga0209050_1004251 Ga0209050_10042514 356
253 3300025302 Ga0207426_1000744 Ga0207426_10007443 356
254 3300025303 Ga0209051_1000850 Ga0209051_10008506 356
255 3300025304 Ga0209257_1007703 Ga0209257_10077035 356
256 3300041491 Ga0451833_0417608 Ga0451833_0417608_629_1702 356
257 3300041492 Ga0451835_0551986 Ga0451835_0551986_2659_3732 356
258 3300041494 Ga0451837_0045842 Ga0451837_0045842_903_1976 356
259 3300041496 Ga0451839_0024467 Ga0451839_0024467_2587_3660 356
260 3300041501 Ga0451845_0056956 Ga0451845_0056956_2659_3732 356
261 3300041503 Ga0451847_0355038 Ga0451847_0355038_2450_3523 356
262 3300041505 Ga0451849_0180214 Ga0451849_0180214_4626_5699 356
263 3300041507 Ga0451851_0952236 Ga0451851_0952236_579_1652 356
264 3300041509 Ga0451843_0025864 Ga0451843_0025864_3604_4677 356
265 3300041511 Ga0451855_1133536 Ga0451855_1133536_383_1456 356
266 3300053156 Ga0500622_0000290 Ga0500622_0000290_48648_49721 356
267 3300002987 JGI25159J45721_1001726 JGI25159J45721_10017267 357
268 3300003354 JGI25160J50197_1000095 JGI25160J50197_100009539 357
269 3300003374 JGI25161J50226_1000071 JGI25161J50226_100007146 357
270 3300004625 Ga0055543_1000206 Ga0055543_100020610 357
271 3300005262 Ga0065165_1000408 Ga0065165_100040821 357
272 3300025284 Ga0209130_1000180 Ga0209130_100018044 357
273 3300025302 Ga0207426_1000017 Ga0207426_1000017499 357
274 3300046512 Ga0495610_0063221 Ga0495610_0063221_148_1221 357
275 3300046522 Ga0495643_0024163 Ga0495643_0024163_2106_3179 357
276 3300046694 Ga0495649_0044450 Ga0495649_0044450_501_1574 357
277 3300047472 Ga0495686_0177039 Ga0495686_0177039_103_1176 357
278 3300048917 Ga0496114_0349876 Ga0496114_0349876_84_1163 357
279 3300048924 Ga0496121_0076365 Ga0496121_0076365_600_1673 357

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00180

Iso_dh

Isocitrate/isopropylmalate dehydrogenase

43

386

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fmx-assembly1.cif.gz_X crystal structure of tartrate dehydrogenase from pseudomonas putida complexed with nadh 0.9575 6 356
3fmx-assembly1.cif.gz_X crystal structure of tartrate dehydrogenase from pseudomonas putida complexed with nadh 0.9392 6 356
2g4o-assembly1.cif.gz_A anomalous substructure of 3-isopropylmalate dehydrogenase 0.9341 7 357
2g4o-assembly1.cif.gz_A anomalous substructure of 3-isopropylmalate dehydrogenase 0.9288 7 357
6lky-assembly1.cif.gz_B crystal structure of isocitrate dehydrogenase from methylococcus capsulatus 0.9157 7 356
ID Description Score Start End Superfamily
af_P76251_1_360_3.40.718.10 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9639 5 356 3.40.718.10
af_P76251_1_360_3.40.718.10 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9481 5 356 3.40.718.10
1w0dB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9332 7 357 3.40.718.10
1w0dB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9278 7 357 3.40.718.10
1x0lB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.9094 6 356 3.40.718.10
ID Description Score Start End GO Terms
AF-A0A085DRM0-F1-model_v4 deleted 0.9985 6 98
AF-A0A246IS19-F1-model_v4 Tartrate dehydrogenase 0.9864 3 110
AF-A0A0K3RWU4-F1-model_v4 deleted 0.9841 5 99
AF-A0A3M3F2V9-F1-model_v4 deleted 0.9822 2 122
AF-A0A536T3D2-F1-model_v4 Tartrate dehydrogenase 0.9812 5 131

Feature Viewer

pLDDT pTM Quality
90.19 0.91 High
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Predicted Structure (AlphaFold2)

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