F384136

General Info

Members Datasets Scaffolds Average Seq Length
281 216 256 233

Family's Representative Sequence

Representative Sequence 3300005455|Ga0070663_100387120|Ga0070663_1003871201
Length 262
Sequence MPRLDKLDVRGRDLSKGSATDGSLGDVNAPSDAKPHVLVVEDDRAVRESLRRSLEFNGYVVSLAEDGAAALAGISGTNPDAIVMDVMMPRLDGIETTRALRSVGNQVPILVLTARDAVGDRVEGLDAGADDYLTKPFALDELLARLRALLRRAAPGHEAEADERLEFADLSMDLASREVRRGDRPMTLTRTEFSLLELFMRRPRRVLERSFILEEVWGFDFPTTANSLEVYVGYLRRKTEAEGEPRLLHTVRGVGYVLRETP

Samples

Sample ID Description Type Environment
1 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
2 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
3 2643221561 Nocardioides sp. Root151 Isolate Unclassified
4 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
5 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
6 2643221696 Nocardioides sp. Root140 Isolate Unclassified
7 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
8 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
9 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
10 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
11 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
12 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
13 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
14 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
15 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
16 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
17 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
18 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
19 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
20 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
21 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
22 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
23 2922554459 Rhodococcus sp. 66b Isolate Unclassified
24 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
25 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
26 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
27 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
28 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
29 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
32 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
33 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
34 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
35 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
36 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
37 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
38 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
39 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
40 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
41 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
42 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
43 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
44 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
45 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
46 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
47 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
48 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
51 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
52 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
53 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
54 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
55 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
56 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
57 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
58 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
59 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
60 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
61 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
62 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
63 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
64 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
65 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
66 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
67 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
68 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
69 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
80 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
83 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
84 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
85 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
86 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
87 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
88 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
89 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
91 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
125 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
126 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
127 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
128 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
129 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
130 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
131 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
132 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
133 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
134 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
135 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
136 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
137 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
138 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
139 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
140 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
141 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
142 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
143 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
144 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
145 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
146 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
147 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
148 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
149 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
150 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
151 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
152 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
153 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
154 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
155 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
156 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
157 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
158 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
159 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
160 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
161 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
162 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
163 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
164 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
165 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
172 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
173 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
174 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
175 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
178 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
179 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
180 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
181 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
182 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
196 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
197 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
198 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
199 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
200 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
201 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
202 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
204 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
205 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
206 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
207 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
208 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
209 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
210 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
211 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
212 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
213 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
214 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
215 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
216 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.04
Metatranscriptomes 1.07
Isolates 8.9

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 4.63
Nodule 0
Rhizoplane 7.83
Rhizosphere 77.58
Stem 0
Stem Tuber 0
Unclassified 9.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10015379 3300001979 Bacteria 2796
2 JGI24739J22299_10096118 3300001989 Bacteria 897
3 JGI24738J21930_10006630 3300002075 Bacteria 2699
4 Ga0065165_1000903 3300005262 Bacteria 38298
5 Ga0070658_10029071 3300005327 Bacteria 4439
6 Ga0070683_100005315 3300005329 Bacteria 10733
7 Ga0070683_100208565 3300005329 Bacteria 1856
8 Ga0070682_100021502 3300005337 Bacteria 3808
9 Ga0070682_100057935 3300005337 Bacteria 2442
10 Ga0070692_10000288 3300005345 Bacteria 14218
11 Ga0070668_100081249 3300005347 Bacteria 2541
12 Ga0070675_100149883 3300005354 Bacteria 1999
13 Ga0070674_100004944 3300005356 Bacteria 7638
14 Ga0070674_100679818 3300005356 Bacteria 878
15 Ga0070673_100092244 3300005364 Bacteria 2477
16 Ga0070659_100012859 3300005366 Bacteria 6219
17 Ga0070659_100013130 3300005366 Bacteria 6159
18 Ga0070659_100094168 3300005366 Bacteria 2405
19 Ga0070667_100452997 3300005367 Bacteria 1173
20 Ga0070667_100566858 3300005367 Bacteria 1044
21 Ga0070701_10028780 3300005438 Bacteria 2733
22 Ga0070701_10101371 3300005438 Bacteria 1595
23 Ga0070700_100001534 3300005441 Bacteria 11512
24 Ga0070694_100097004 3300005444 Bacteria 2079
25 Ga0070663_100387120 3300005455 Bacteria 1140
26 Ga0068867_100003142 3300005459 Bacteria 11644
27 Ga0070684_100048665 3300005535 Bacteria 3678
28 Ga0070684_100200424 3300005535 Bacteria 1818
29 Ga0070684_100252580 3300005535 Bacteria 1612
30 Ga0070684_100281048 3300005535 Bacteria 1525
31 Ga0070684_100472620 3300005535 Bacteria 1160
32 Ga0068853_100194952 3300005539 Bacteria 1842
33 Ga0070686_100077251 3300005544 Bacteria 2195
34 Ga0070665_100728012 3300005548 Bacteria 1005
35 Ga0068855_100441172 3300005563 Bacteria 1422
36 Ga0070664_100147792 3300005564 Bacteria 2073
37 Ga0070664_100532576 3300005564 Bacteria 1085
38 Ga0068857_100561700 3300005577 Bacteria 1076
39 Ga0068857_100750261 3300005577 Bacteria 930
40 Ga0068854_100042990 3300005578 Bacteria 3201
41 Ga0068856_100982765 3300005614 Bacteria 863
42 Ga0070702_100000765 3300005615 Bacteria 12194
43 Ga0068852_100061940 3300005616 Bacteria 3252
44 Ga0068864_100132509 3300005618 Bacteria 2241
45 Ga0068866_10003732 3300005718 Bacteria 6246
46 Ga0068851_10102739 3300005834 Bacteria 1518
47 Ga0068870_10001913 3300005840 Bacteria 8586
48 Ga0068860_100848510 3300005843 Bacteria 928
49 Ga0081455_10267753 3300005937 Bacteria 1241
50 Ga0081538_10000548 3300005981 Bacteria 41457
51 Ga0081539_10046388 3300005985 Bacteria 2490
52 Ga0075365_10045651 3300006038 Bacteria 2875
53 Ga0075365_10151696 3300006038 Bacteria 1612
54 Ga0075364_10000347 3300006051 Bacteria 23005
55 Ga0075364_10133381 3300006051 Bacteria 1668
56 Ga0075362_10044169 3300006177 Bacteria 1975
57 Ga0075428_100141009 3300006844 Bacteria 2621
58 Ga0075430_100058002 3300006846 Bacteria 3255
59 Ga0068865_100022091 3300006881 Bacteria 4145
60 Ga0111539_10074919 3300009094 Bacteria 3988
61 Ga0105245_10017921 3300009098 Bacteria 6184
62 Ga0114129_10005189 3300009147 Bacteria 18345
63 Ga0105243_10002182 3300009148 Bacteria 16514
64 Ga0105243_10326125 3300009148 Bacteria 1401
65 Ga0105242_10142426 3300009176 Bacteria 2082
66 Ga0105248_10017162 3300009177 Bacteria 7974
67 Ga0105238_10145062 3300009551 Bacteria 2350
68 Ga0105238_10245244 3300009551 Bacteria 1769
69 Ga0105249_10025405 3300009553 Bacteria 5332
70 Ga0105249_10307722 3300009553 Bacteria 1592
71 Ga0105249_10711028 3300009553 Bacteria 1065
72 Ga0105239_10004959 3300010375 Bacteria 15716
73 Ga0105246_10618043 3300011119 Bacteria 939
74 Ga0157369_10446362 3300013105 Bacteria 1340
75 Ga0157372_10155311 3300013307 Bacteria 2643
76 Ga0157372_10341800 3300013307 Bacteria 1743
77 Ga0157375_11076573 3300013308 Bacteria 940
78 Ga0157380_10935524 3300014326 Bacteria 896
79 Ga0182008_10030826 3300014497 Bacteria 2701
80 Ga0182008_10257144 3300014497 Bacteria 902
81 Ga0157377_10012528 3300014745 Bacteria 4268
82 Ga0157376_10744667 3300014969 Bacteria 989
83 Ga0163161_10089472 3300017792 Bacteria 2277
84 Ga0206353_11154083 3300020082 Bacteria 2120
85 Ga0154015_1690079 3300020610 Bacteria 1426
86 Ga0209025_1007376 3300025294 Bacteria 8221
87 Ga0207426_1074449 3300025302 Bacteria 937
88 Ga0207697_10198785 3300025315 Bacteria 881
89 Ga0207642_10122634 3300025899 Bacteria 1343
90 Ga0207688_10007724 3300025901 Bacteria 5860
91 Ga0207647_10002128 3300025904 Bacteria 15136
92 Ga0207647_10148118 3300025904 Bacteria 1373
93 Ga0207643_10000686 3300025908 Bacteria 21134
94 Ga0207657_10218953 3300025919 Bacteria 1526
95 Ga0207687_10006469 3300025927 Bacteria 7737
96 Ga0207690_10024021 3300025932 Bacteria 3813
97 Ga0207690_10103391 3300025932 Bacteria 2039
98 Ga0207690_10124155 3300025932 Bacteria 1880
99 Ga0207686_10091287 3300025934 Bacteria 2011
100 Ga0207709_10013230 3300025935 Bacteria 4551
101 Ga0207669_10063704 3300025937 Bacteria 2277
102 Ga0207704_10279789 3300025938 Bacteria 1268
103 Ga0207691_10002759 3300025940 Bacteria 17117
104 Ga0207711_10119190 3300025941 Bacteria 2354
105 Ga0207661_10116352 3300025944 Bacteria 2270
106 Ga0207679_10012179 3300025945 Bacteria 5601
107 Ga0207667_10128326 3300025949 Bacteria 2612
108 Ga0207712_10027135 3300025961 Bacteria 3822
109 Ga0207712_10516424 3300025961 Bacteria 1023
110 Ga0207640_10477090 3300025981 Bacteria 1034
111 Ga0207658_10072571 3300025986 Bacteria 2610
112 Ga0207658_10381358 3300025986 Bacteria 1235
113 Ga0207639_10422856 3300026041 Bacteria 1205
114 Ga0207678_10037017 3300026067 Bacteria 4247
115 Ga0207678_10300462 3300026067 Bacteria 1379
116 Ga0207708_10000171 3300026075 Bacteria 51434
117 Ga0207708_10497977 3300026075 Bacteria 1021
118 Ga0207641_10836863 3300026088 Bacteria 912
119 Ga0207648_10000926 3300026089 Bacteria 33052
120 Ga0207676_10728354 3300026095 Bacteria 963
121 Ga0207674_10062467 3300026116 Bacteria 3762
122 Ga0207675_100001852 3300026118 Bacteria 21231
123 Ga0207683_10210470 3300026121 Bacteria 1770
124 Ga0207698_10012275 3300026142 Bacteria 5599
125 Ga0268265_10726423 3300028380 Bacteria 962
126 Ga0268264_10730934 3300028381 Bacteria 985
127 Ga0307515_10179575 3300028794 Bacteria 2073
128 Ga0307512_10123293 3300030522 Bacteria 1655
129 Ga0314311_1089162 3300030733 Bacteria 1262
130 Ga0316179_1051860 3300030734 Bacteria 815
131 Ga0307513_10347210 3300031456 Bacteria 1233
132 Ga0307410_10082046 3300031852 Bacteria 2267
133 Ga0307407_10042788 3300031903 Bacteria 2542
134 Ga0307407_10081075 3300031903 Bacteria 1963
135 Ga0307412_10050337 3300031911 Bacteria 2749
136 Ga0307409_100307155 3300031995 Bacteria 1478
137 Ga0307416_100389207 3300032002 Bacteria 1427
138 Ga0307414_10138095 3300032004 Bacteria 1904
139 Ga0307411_10050309 3300032005 Bacteria 2713
140 Ga0307507_10243734 3300033179 Bacteria 1172
141 Ga0373949_0066016 3300035090 Bacteria 940
142 Ga0439436_0007021 3300041404 Bacteria 3466
143 Ga0439461_0067160 3300041410 Bacteria 825
144 Ga0439465_0000422 3300041413 Bacteria 12352
145 Ga0451833_0579776 3300041491 Bacteria 14024
146 Ga0439445_0002702 3300042004 Bacteria 3949
147 Ga0439449_0000087 3300042007 Bacteria 30122
148 Ga0439464_0039046 3300042439 Bacteria 1349
149 Ga0451577_0023992 3300042876 Bacteria 5554
150 Ga0466972_0009335 3300044658 Bacteria 4931
151 Ga0466965_0006504 3300044683 Bacteria 5311
152 Ga0466965_0103093 3300044683 Bacteria 1460
153 Ga0466965_0242625 3300044683 Bacteria 965
154 Ga0466966_0040852 3300044684 Bacteria 2983
155 Ga0466966_0098632 3300044684 Bacteria 1809
156 Ga0466961_0050324 3300044693 Bacteria 2661
157 Ga0466961_0337729 3300044693 Bacteria 918
158 Ga0466963_0143509 3300044694 Bacteria 1655
159 Ga0466970_0061909 3300044765 Bacteria 2005
160 Ga0466970_0088360 3300044765 Bacteria 1681
161 Ga0466957_0001740 3300044842 Bacteria 11460
162 Ga0466957_0133876 3300044842 Bacteria 1591
163 Ga0466960_0003678 3300044901 Bacteria 5915
164 Ga0466960_0011325 3300044901 Bacteria 3728
165 Ga0466960_0038647 3300044901 Bacteria 2246
166 Ga0466960_0057692 3300044901 Bacteria 1894
167 Ga0466960_0122321 3300044901 Bacteria 1364
168 Ga0466958_0235872 3300045836 Bacteria 1168
169 Ga0466967_0010656 3300045976 Bacteria 6911
170 Ga0466967_0046797 3300045976 Bacteria 3768
171 Ga0466967_0263465 3300045976 Bacteria 1649
172 Ga0466967_0268831 3300045976 Bacteria 1633
173 Ga0466967_0397918 3300045976 Bacteria 1340
174 Ga0495664_0101306 3300046477 Bacteria 1735
175 Ga0495583_0025155 3300046506 Bacteria 2979
176 Ga0495608_0375781 3300046511 Bacteria 872
177 Ga0495640_0453999 3300046533 Bacteria 783
178 Ga0495586_0036443 3300046535 Bacteria 2640
179 Ga0495668_0001186 3300046616 Bacteria 26476
180 Ga0495658_0147922 3300046683 Bacteria 1441
181 Ga0495672_0107256 3300047320 Bacteria 1505
182 Ga0496100_0059647 3300048903 Bacteria 2508
183 Ga0496101_0010510 3300048904 Bacteria 6113
184 Ga0496102_0169006 3300048905 Bacteria 2058
185 Ga0496102_0260720 3300048905 Bacteria 1634
186 Ga0496102_0352822 3300048905 Bacteria 1385
187 Ga0496103_0040260 3300048906 Bacteria 2872
188 Ga0496104_0191310 3300048907 Bacteria 1958
189 Ga0496105_0080887 3300048908 Bacteria 2684
190 Ga0496106_0010872 3300048909 Bacteria 6726
191 Ga0496106_0088063 3300048909 Bacteria 2393
192 Ga0496107_0016224 3300048910 Bacteria 5228
193 Ga0496108_0093332 3300048911 Bacteria 2560
194 Ga0496108_0536068 3300048911 Bacteria 1022
195 Ga0496109_0120812 3300048912 Bacteria 2441
196 Ga0496109_0140249 3300048912 Bacteria 2260
197 Ga0496109_0812523 3300048912 Bacteria 873
198 Ga0496110_0066211 3300048913 Bacteria 3195
199 Ga0496110_0396614 3300048913 Bacteria 1258
200 Ga0496110_0789004 3300048913 Bacteria 854
201 Ga0496112_0635201 3300048915 Bacteria 998
202 Ga0496114_0189585 3300048917 Bacteria 1799
203 Ga0496114_0247185 3300048917 Bacteria 1569
204 Ga0496116_0009123 3300048919 Bacteria 8500
205 Ga0496122_0215650 3300048925 Bacteria 1107
206 Ga0496123_0023633 3300048926 Bacteria 4699
207 Ga0496124_0096231 3300048927 Bacteria 2405
208 Ga0496125_0043786 3300048928 Bacteria 3793
209 Ga0501318_007952 3300049534 Bacteria 1122
210 Ga0501031_0160431 3300049568 Bacteria 1470
211 Ga0501031_0284027 3300049568 Bacteria 1073
212 Ga0501031_0299446 3300049568 Bacteria 1042
213 Ga0501033_0125509 3300049570 Bacteria 1861
214 Ga0501034_0033873 3300049571 Bacteria 5179
215 Ga0501034_0633875 3300049571 Bacteria 972
216 Ga0501036_0015326 3300049572 Bacteria 6402
217 Ga0501037_0032811 3300049573 Bacteria 3836
218 Ga0501038_0019872 3300049574 Bacteria 6045
219 Ga0501039_0168319 3300049575 Bacteria 1723
220 Ga0501039_0302691 3300049575 Bacteria 1257
221 Ga0501041_0110898 3300049577 Bacteria 1702
222 Ga0501042_0011333 3300049578 Bacteria 6013
223 Ga0501042_0089626 3300049578 Bacteria 2207
224 Ga0501043_0346598 3300049579 Bacteria 1129
225 Ga0501047_0137051 3300049581 Bacteria 2327
226 Ga0501048_0126502 3300049582 Bacteria 1807
227 Ga0501048_0174172 3300049582 Bacteria 1525
228 Ga0501067_0031647 3300049583 Bacteria 2935
229 Ga0501069_0041341 3300049585 Bacteria 2548
230 Ga0501069_0059067 3300049585 Bacteria 2140
231 Ga0501069_0147490 3300049585 Bacteria 1351
232 Ga0501070_0353406 3300049586 Bacteria 1192
233 Ga0501070_0949693 3300049586 Bacteria 669
234 Ga0501071_0173544 3300049587 Bacteria 1614
235 Ga0501071_0333319 3300049587 Bacteria 1153
236 Ga0501072_0201852 3300049588 Bacteria 1585
237 Ga0501072_0202124 3300049588 Bacteria 1584
238 Ga0501073_0047537 3300049589 Bacteria 3016
239 Ga0501081_0649158 3300049743 Bacteria 791
240 Ga0501035_0035003 3300049822 Bacteria 4562
241 Ga0501035_0345185 3300049822 Bacteria 1247
242 Ga0501044_0009792 3300049823 Bacteria 10421
243 nmdc:mga03683_22232_c1 3300050489 Bacteria 2457
244 nmdc:mga0yw44_42146_c1 3300050492 Bacteria 2721
245 nmdc:mga07m45_268325_c1 3300050496 Bacteria 993
246 nmdc:mga05p37_22406_c1 3300050507 Bacteria 7662
247 nmdc:mga09592_118684_c1 3300050508 Bacteria 2271
248 nmdc:mga06r32_10339_c1 3300050510 Bacteria 8415
249 nmdc:mga08y16_21907_c1 3300050511 Bacteria 6745
250 nmdc:mga0n895_801315_c1 3300050512 Bacteria 932
251 Ga0495655_0057771 3300053083 Bacteria 1048
252 Ga0495655_0085982 3300053083 Bacteria 908
253 Ga0500644_0000204 3300053088 Bacteria 35880
254 Ga0500616_0002602 3300053153 Bacteria 14772
255 Ga0501082_0164710 3300060353 Bacteria 1927
256 Ga0466962_0002050 3300061719 Bacteria 9534

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0949693 Ga0501070_0949693_74_649 191
2 3300041410 Ga0439461_0067160 Ga0439461_0067160_15_617 200
3 3300014326 Ga0157380_10935524 Ga0157380_109355242 209
4 3300041491 Ga0451833_0579776 Ga0451833_0579776_3517_4212 209
5 3300050496 nmdc:mga07m45_268325_c1 nmdc:mga07m45_268325_c1_327_959 209
6 iso_pu_bacteria 2643221687 2644490589 213
7 3300046535 Ga0495586_0036443 Ga0495586_0036443_1733_2419 214
8 3300046506 Ga0495583_0025155 Ga0495583_0025155_1908_2597 216
9 3300026067 Ga0207678_10300462 Ga0207678_103004621 217
10 3300046533 Ga0495640_0453999 Ga0495640_0453999_82_771 217
11 3300049534 Ga0501318_007952 Ga0501318_007952_459_1112 217
12 3300046683 Ga0495658_0147922 Ga0495658_0147922_492_1181 219
13 3300005364 Ga0070673_100092244 Ga0070673_1000922444 220
14 3300042876 Ga0451577_0023992 Ga0451577_0023992_2812_3486 220
15 3300044693 Ga0466961_0337729 Ga0466961_0337729_27_773 220
16 3300049587 Ga0501071_0173544 Ga0501071_0173544_556_1227 220
17 3300049588 Ga0501072_0202124 Ga0501072_0202124_789_1460 220
18 3300005262 Ga0065165_1000903 Ga0065165_100090311 221
19 3300025302 Ga0207426_1074449 Ga0207426_10744491 221
20 3300009098 Ga0105245_10017921 Ga0105245_100179212 222
21 3300009148 Ga0105243_10002182 Ga0105243_1000218213 222
22 3300009176 Ga0105242_10142426 Ga0105242_101424262 222
23 3300009177 Ga0105248_10017162 Ga0105248_100171624 222
24 3300009551 Ga0105238_10245244 Ga0105238_102452442 222
25 3300009553 Ga0105249_10025405 Ga0105249_100254053 222
26 3300014745 Ga0157377_10012528 Ga0157377_100125283 222
27 3300014969 Ga0157376_10744667 Ga0157376_107446672 222
28 3300025315 Ga0207697_10198785 Ga0207697_101987852 222
29 3300025901 Ga0207688_10007724 Ga0207688_100077246 222
30 3300030733 Ga0314311_1089162 Ga0314311_10891622 222
31 3300041404 Ga0439436_0007021 Ga0439436_0007021_1722_2408 222
32 3300041413 Ga0439465_0000422 Ga0439465_0000422_10916_11602 222
33 3300042004 Ga0439445_0002702 Ga0439445_0002702_1891_2577 222
34 3300042007 Ga0439449_0000087 Ga0439449_0000087_22412_23098 222
35 3300048905 Ga0496102_0352822 Ga0496102_0352822_110_793 222
36 3300048909 Ga0496106_0088063 Ga0496106_0088063_154_837 222
37 3300049575 Ga0501039_0302691 Ga0501039_0302691_57_749 222
38 3300049587 Ga0501071_0333319 Ga0501071_0333319_32_724 222
39 3300049588 Ga0501072_0201852 Ga0501072_0201852_81_773 222
40 3300048919 Ga0496116_0009123 Ga0496116_0009123_3907_4608 223
41 3300049571 Ga0501034_0633875 Ga0501034_0633875_48_719 223
42 3300049578 Ga0501042_0089626 Ga0501042_0089626_237_908 223
43 3300053088 Ga0500644_0000204 Ga0500644_0000204_34882_35565 223
44 3300002075 JGI24738J21930_10006630 JGI24738J21930_100066302 224
45 3300005329 Ga0070683_100005315 Ga0070683_1000053156 224
46 3300005337 Ga0070682_100021502 Ga0070682_1000215022 224
47 3300005345 Ga0070692_10000288 Ga0070692_100002887 224
48 3300005354 Ga0070675_100149883 Ga0070675_1001498832 224
49 3300005356 Ga0070674_100004944 Ga0070674_1000049445 224
50 3300005366 Ga0070659_100012859 Ga0070659_1000128598 224
51 3300005367 Ga0070667_100452997 Ga0070667_1004529972 224
52 3300005438 Ga0070701_10028780 Ga0070701_100287803 224
53 3300005438 Ga0070701_10101371 Ga0070701_101013712 224
54 3300005441 Ga0070700_100001534 Ga0070700_1000015349 224
55 3300005444 Ga0070694_100097004 Ga0070694_1000970044 224
56 3300005459 Ga0068867_100003142 Ga0068867_1000031427 224
57 3300005535 Ga0070684_100048665 Ga0070684_1000486653 224
58 3300005539 Ga0068853_100194952 Ga0068853_1001949522 224
59 3300005544 Ga0070686_100077251 Ga0070686_1000772511 224
60 3300005548 Ga0070665_100728012 Ga0070665_1007280121 224
61 3300005578 Ga0068854_100042990 Ga0068854_1000429903 224
62 3300005615 Ga0070702_100000765 Ga0070702_1000007656 224
63 3300005616 Ga0068852_100061940 Ga0068852_1000619404 224
64 3300005618 Ga0068864_100132509 Ga0068864_1001325092 224
65 3300005718 Ga0068866_10003732 Ga0068866_100037324 224
66 3300005834 Ga0068851_10102739 Ga0068851_101027392 224
67 3300005840 Ga0068870_10001913 Ga0068870_100019138 224
68 3300006881 Ga0068865_100022091 Ga0068865_1000220916 224
69 3300009148 Ga0105243_10326125 Ga0105243_103261252 224
70 3300013308 Ga0157375_11076573 Ga0157375_110765731 224
71 3300017792 Ga0163161_10089472 Ga0163161_100894723 224
72 3300025899 Ga0207642_10122634 Ga0207642_101226341 224
73 3300025908 Ga0207643_10000686 Ga0207643_1000068616 224
74 3300025927 Ga0207687_10006469 Ga0207687_100064695 224
75 3300025932 Ga0207690_10024021 Ga0207690_100240212 224
76 3300025934 Ga0207686_10091287 Ga0207686_100912872 224
77 3300025935 Ga0207709_10013230 Ga0207709_100132306 224
78 3300025937 Ga0207669_10063704 Ga0207669_100637042 224
79 3300025940 Ga0207691_10002759 Ga0207691_100027593 224
80 3300025941 Ga0207711_10119190 Ga0207711_101191902 224
81 3300025961 Ga0207712_10027135 Ga0207712_100271352 224
82 3300025986 Ga0207658_10072571 Ga0207658_100725711 224
83 3300026041 Ga0207639_10422856 Ga0207639_104228562 224
84 3300026075 Ga0207708_10000171 Ga0207708_100001711 224
85 3300026089 Ga0207648_10000926 Ga0207648_1000092616 224
86 3300026118 Ga0207675_100001852 Ga0207675_10000185213 224
87 3300026121 Ga0207683_10210470 Ga0207683_102104702 224
88 3300026142 Ga0207698_10012275 Ga0207698_100122753 224
89 3300045976 Ga0466967_0010656 Ga0466967_0010656_2688_3365 224
90 3300048905 Ga0496102_0260720 Ga0496102_0260720_220_915 224
91 3300053153 Ga0500616_0002602 Ga0500616_0002602_13342_14037 224
92 iso_pu_bacteria 2523231044 2523385119 224
93 iso_pu_bacteria 2565956761 2566992143 224
94 iso_pu_bacteria 2738543005 2739204193 224
95 iso_pu_bacteria 2751185725 2753037768 224
96 iso_pu_bacteria 2751185792 2753325636 224
97 iso_pu_bacteria 2842888712 2842891173 224
98 iso_pu_bacteria 2904535858 2904538035 224
99 iso_pu_bacteria 2904765812 2904766552 224
100 iso_pu_bacteria 2904770941 2904772720 224
101 iso_pu_bacteria 2908811453 2908811510 224
102 iso_pu_bacteria 2919420072 2919421013 224
103 iso_pu_bacteria 2919432681 2919433229 224
104 iso_pu_bacteria 2922554459 2922557218 224
105 iso_pu_bacteria 2928142448 2928145080 224
106 3300025904 Ga0207647_10148118 Ga0207647_101481182 225
107 3300044684 Ga0466966_0098632 Ga0466966_0098632_607_1299 225
108 3300045976 Ga0466967_0268831 Ga0466967_0268831_734_1414 225
109 3300049570 Ga0501033_0125509 Ga0501033_0125509_154_846 225
110 3300049571 Ga0501034_0033873 Ga0501034_0033873_2470_3162 225
111 3300049572 Ga0501036_0015326 Ga0501036_0015326_630_1322 225
112 3300049573 Ga0501037_0032811 Ga0501037_0032811_2279_2971 225
113 3300049574 Ga0501038_0019872 Ga0501038_0019872_1507_2199 225
114 3300049578 Ga0501042_0011333 Ga0501042_0011333_241_933 225
115 3300049579 Ga0501043_0346598 Ga0501043_0346598_287_979 225
116 3300049581 Ga0501047_0137051 Ga0501047_0137051_820_1512 225
117 3300049589 Ga0501073_0047537 Ga0501073_0047537_1902_2594 225
118 3300049822 Ga0501035_0035003 Ga0501035_0035003_2735_3427 225
119 3300049823 Ga0501044_0009792 Ga0501044_0009792_4934_5626 225
120 3300005327 Ga0070658_10029071 Ga0070658_100290713 226
121 3300005366 Ga0070659_100013130 Ga0070659_1000131303 226
122 3300005563 Ga0068855_100441172 Ga0068855_1004411722 226
123 3300005577 Ga0068857_100561700 Ga0068857_1005617002 226
124 3300005985 Ga0081539_10046388 Ga0081539_100463883 226
125 3300006177 Ga0075362_10044169 Ga0075362_100441692 226
126 3300020082 Ga0206353_11154083 Ga0206353_111540832 226
127 3300020610 Ga0154015_1690079 Ga0154015_16900792 226
128 3300044683 Ga0466965_0103093 Ga0466965_0103093_684_1388 226
129 3300044684 Ga0466966_0040852 Ga0466966_0040852_1608_2330 226
130 3300044693 Ga0466961_0050324 Ga0466961_0050324_78_800 226
131 3300044765 Ga0466970_0061909 Ga0466970_0061909_756_1478 226
132 3300044901 Ga0466960_0122321 Ga0466960_0122321_370_1092 226
133 3300050489 nmdc:mga03683_22232_c1 nmdc:mga03683_22232_c1_1586_2269 226
134 iso_pu_bacteria 2643221681 2644455016 226
135 iso_pu_bacteria 2643221697 2644539500 226
136 iso_pu_bacteria 2773857762 2774395149 226
137 iso_pu_bacteria 2808606439 2809194016 226
138 iso_pu_bacteria 2811994878 2812348753 226
139 iso_pu_bacteria 2816332119 2816422057 226
140 iso_pu_bacteria 2891968417 2891973483 226
141 iso_pu_bacteria 2984592036 2984593199 226
142 3300005981 Ga0081538_10000548 Ga0081538_1000054843 227
143 3300044683 Ga0466965_0242625 Ga0466965_0242625_107_835 227
144 3300044765 Ga0466970_0088360 Ga0466970_0088360_147_851 227
145 3300044901 Ga0466960_0003678 Ga0466960_0003678_1762_2469 227
146 3300048917 Ga0496114_0247185 Ga0496114_0247185_758_1441 227
147 3300053083 Ga0495655_0085982 Ga0495655_0085982_23_730 227
148 iso_pu_bacteria 2643221561 2643826828 227
149 iso_pu_bacteria 2643221696 2644534177 227
150 3300005356 Ga0070674_100679818 Ga0070674_1006798181 228
151 3300005455 Ga0070663_100387120 Ga0070663_1003871201 228
152 3300005535 Ga0070684_100281048 Ga0070684_1002810481 228
153 3300005535 Ga0070684_100472620 Ga0070684_1004726202 228
154 3300005577 Ga0068857_100750261 Ga0068857_1007502612 228
155 3300005614 Ga0068856_100982765 Ga0068856_1009827651 228
156 3300005937 Ga0081455_10267753 Ga0081455_102677532 228
157 3300006038 Ga0075365_10151696 Ga0075365_101516962 228
158 3300006051 Ga0075364_10133381 Ga0075364_101333812 228
159 3300009553 Ga0105249_10307722 Ga0105249_103077222 228
160 3300010375 Ga0105239_10004959 Ga0105239_100049595 228
161 3300011119 Ga0105246_10618043 Ga0105246_106180432 228
162 3300014497 Ga0182008_10030826 Ga0182008_100308262 228
163 3300014497 Ga0182008_10257144 Ga0182008_102571441 228
164 3300025919 Ga0207657_10218953 Ga0207657_102189532 228
165 3300025944 Ga0207661_10116352 Ga0207661_101163522 228
166 3300025949 Ga0207667_10128326 Ga0207667_101283263 228
167 3300026095 Ga0207676_10728354 Ga0207676_107283541 228
168 3300031852 Ga0307410_10082046 Ga0307410_100820463 228
169 3300031903 Ga0307407_10042788 Ga0307407_100427882 228
170 3300031903 Ga0307407_10081075 Ga0307407_100810753 228
171 3300031995 Ga0307409_100307155 Ga0307409_1003071552 228
172 3300032002 Ga0307416_100389207 Ga0307416_1003892072 228
173 3300032004 Ga0307414_10138095 Ga0307414_101380952 228
174 3300032005 Ga0307411_10050309 Ga0307411_100503092 228
175 3300044658 Ga0466972_0009335 Ga0466972_0009335_2943_3650 228
176 3300044683 Ga0466965_0006504 Ga0466965_0006504_3795_4502 228
177 3300044694 Ga0466963_0143509 Ga0466963_0143509_635_1342 228
178 3300044842 Ga0466957_0001740 Ga0466957_0001740_6820_7527 228
179 3300044842 Ga0466957_0133876 Ga0466957_0133876_194_916 228
180 3300044901 Ga0466960_0011325 Ga0466960_0011325_2590_3300 228
181 3300044901 Ga0466960_0038647 Ga0466960_0038647_648_1358 228
182 3300044901 Ga0466960_0057692 Ga0466960_0057692_348_1079 228
183 3300045836 Ga0466958_0235872 Ga0466958_0235872_66_773 228
184 3300045976 Ga0466967_0046797 Ga0466967_0046797_3050_3757 228
185 3300045976 Ga0466967_0263465 Ga0466967_0263465_233_949 228
186 3300046477 Ga0495664_0101306 Ga0495664_0101306_689_1408 228
187 3300046616 Ga0495668_0001186 Ga0495668_0001186_10679_11365 228
188 3300048912 Ga0496109_0140249 Ga0496109_0140249_727_1431 228
189 3300048913 Ga0496110_0396614 Ga0496110_0396614_270_974 228
190 3300048925 Ga0496122_0215650 Ga0496122_0215650_164_850 228
191 3300048928 Ga0496125_0043786 Ga0496125_0043786_1758_2444 228
192 3300049568 Ga0501031_0284027 Ga0501031_0284027_234_947 228
193 3300049568 Ga0501031_0299446 Ga0501031_0299446_122_835 228
194 3300049575 Ga0501039_0168319 Ga0501039_0168319_899_1612 228
195 3300049577 Ga0501041_0110898 Ga0501041_0110898_920_1633 228
196 3300049582 Ga0501048_0126502 Ga0501048_0126502_716_1429 228
197 3300049582 Ga0501048_0174172 Ga0501048_0174172_668_1378 228
198 3300049585 Ga0501069_0147490 Ga0501069_0147490_69_779 228
199 3300049586 Ga0501070_0353406 Ga0501070_0353406_87_806 228
200 3300049743 Ga0501081_0649158 Ga0501081_0649158_32_745 228
201 3300049822 Ga0501035_0345185 Ga0501035_0345185_471_1184 228
202 3300061719 Ga0466962_0002050 Ga0466962_0002050_3248_3955 228
203 3300005366 Ga0070659_100094168 Ga0070659_1000941682 229
204 3300005564 Ga0070664_100147792 Ga0070664_1001477922 229
205 3300006038 Ga0075365_10045651 Ga0075365_100456512 229
206 3300006844 Ga0075428_100141009 Ga0075428_1001410092 229
207 3300009094 Ga0111539_10074919 Ga0111539_100749195 229
208 3300009551 Ga0105238_10145062 Ga0105238_101450622 229
209 3300025294 Ga0209025_1007376 Ga0209025_10073768 229
210 3300025932 Ga0207690_10124155 Ga0207690_101241552 229
211 3300025945 Ga0207679_10012179 Ga0207679_100121795 229
212 3300026067 Ga0207678_10037017 Ga0207678_100370173 229
213 3300042439 Ga0439464_0039046 Ga0439464_0039046_117_830 229
214 3300045976 Ga0466967_0397918 Ga0466967_0397918_511_1218 229
215 3300046511 Ga0495608_0375781 Ga0495608_0375781_135_842 229
216 3300050492 nmdc:mga0yw44_42146_c1 nmdc:mga0yw44_42146_c1_1089_1826 229
217 3300050511 nmdc:mga08y16_21907_c1 nmdc:mga08y16_21907_c1_4079_4816 229
218 3300001979 JGI24740J21852_10015379 JGI24740J21852_100153792 230
219 3300001989 JGI24739J22299_10096118 JGI24739J22299_100961181 230
220 3300005329 Ga0070683_100208565 Ga0070683_1002085652 230
221 3300005337 Ga0070682_100057935 Ga0070682_1000579352 230
222 3300005347 Ga0070668_100081249 Ga0070668_1000812492 230
223 3300005367 Ga0070667_100566858 Ga0070667_1005668581 230
224 3300005535 Ga0070684_100200424 Ga0070684_1002004242 230
225 3300005535 Ga0070684_100252580 Ga0070684_1002525802 230
226 3300005564 Ga0070664_100532576 Ga0070664_1005325762 230
227 3300005843 Ga0068860_100848510 Ga0068860_1008485102 230
228 3300006051 Ga0075364_10000347 Ga0075364_100003478 230
229 3300006846 Ga0075430_100058002 Ga0075430_1000580022 230
230 3300009147 Ga0114129_10005189 Ga0114129_100051895 230
231 3300009553 Ga0105249_10711028 Ga0105249_107110281 230
232 3300013105 Ga0157369_10446362 Ga0157369_104463622 230
233 3300013307 Ga0157372_10155311 Ga0157372_101553112 230
234 3300013307 Ga0157372_10341800 Ga0157372_103418001 230
235 3300025904 Ga0207647_10002128 Ga0207647_100021283 230
236 3300025932 Ga0207690_10103391 Ga0207690_101033912 230
237 3300025938 Ga0207704_10279789 Ga0207704_102797892 230
238 3300025961 Ga0207712_10516424 Ga0207712_105164241 230
239 3300025981 Ga0207640_10477090 Ga0207640_104770902 230
240 3300025986 Ga0207658_10381358 Ga0207658_103813582 230
241 3300026075 Ga0207708_10497977 Ga0207708_104979772 230
242 3300026088 Ga0207641_10836863 Ga0207641_108368631 230
243 3300026116 Ga0207674_10062467 Ga0207674_100624673 230
244 3300028380 Ga0268265_10726423 Ga0268265_107264232 230
245 3300028381 Ga0268264_10730934 Ga0268264_107309341 230
246 3300028794 Ga0307515_10179575 Ga0307515_101795751 230
247 3300030522 Ga0307512_10123293 Ga0307512_101232932 230
248 3300030734 Ga0316179_1051860 Ga0316179_10518601 230
249 3300031456 Ga0307513_10347210 Ga0307513_103472102 230
250 3300031911 Ga0307412_10050337 Ga0307412_100503372 230
251 3300033179 Ga0307507_10243734 Ga0307507_102437341 230
252 3300035090 Ga0373949_0066016 Ga0373949_0066016_150_866 230
253 3300047320 Ga0495672_0107256 Ga0495672_0107256_201_893 230
254 3300048903 Ga0496100_0059647 Ga0496100_0059647_788_1504 230
255 3300048904 Ga0496101_0010510 Ga0496101_0010510_5317_6033 230
256 3300048905 Ga0496102_0169006 Ga0496102_0169006_1131_1847 230
257 3300048906 Ga0496103_0040260 Ga0496103_0040260_2084_2800 230
258 3300048907 Ga0496104_0191310 Ga0496104_0191310_1040_1756 230
259 3300048908 Ga0496105_0080887 Ga0496105_0080887_1199_1915 230
260 3300048909 Ga0496106_0010872 Ga0496106_0010872_1659_2375 230
261 3300048910 Ga0496107_0016224 Ga0496107_0016224_735_1451 230
262 3300048911 Ga0496108_0093332 Ga0496108_0093332_972_1664 230
263 3300048911 Ga0496108_0536068 Ga0496108_0536068_172_888 230
264 3300048912 Ga0496109_0120812 Ga0496109_0120812_384_1076 230
265 3300048912 Ga0496109_0812523 Ga0496109_0812523_100_792 230
266 3300048913 Ga0496110_0066211 Ga0496110_0066211_380_1072 230
267 3300048913 Ga0496110_0789004 Ga0496110_0789004_64_756 230
268 3300048915 Ga0496112_0635201 Ga0496112_0635201_52_768 230
269 3300048917 Ga0496114_0189585 Ga0496114_0189585_63_779 230
270 3300048926 Ga0496123_0023633 Ga0496123_0023633_2524_3216 230
271 3300048927 Ga0496124_0096231 Ga0496124_0096231_1578_2270 230
272 3300049568 Ga0501031_0160431 Ga0501031_0160431_712_1404 230
273 3300049583 Ga0501067_0031647 Ga0501067_0031647_964_1680 230
274 3300049585 Ga0501069_0041341 Ga0501069_0041341_491_1207 230
275 3300049585 Ga0501069_0059067 Ga0501069_0059067_215_931 230
276 3300050507 nmdc:mga05p37_22406_c1 nmdc:mga05p37_22406_c1_2299_2991 230
277 3300050508 nmdc:mga09592_118684_c1 nmdc:mga09592_118684_c1_1546_2238 230
278 3300050510 nmdc:mga06r32_10339_c1 nmdc:mga06r32_10339_c1_1076_1768 230
279 3300050512 nmdc:mga0n895_801315_c1 nmdc:mga0n895_801315_c1_203_919 230
280 3300053083 Ga0495655_0057771 Ga0495655_0057771_297_989 230
281 3300060353 Ga0501082_0164710 Ga0501082_0164710_33_725 230

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

37

147

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

183

258

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zwm-assembly1.cif.gz_B crystal structure of yycf receiver domain from bacillus subtilis 0.9773 2 118
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9668 1 118
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9665 1 118
4uhj-assembly2.cif.gz_C crystal structure of the receiver domain of cpxr from e. coli (orthorhombic form) 0.9642 1 119
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9638 2 121
ID Description Score Start End Superfamily
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9984 2 77 3.40.50.2300
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9878 1 83 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.98 1 77 3.40.50.2300
af_P23836_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9796 1 77 3.40.50.2300
af_P30843_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9767 1 77 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3D2VRM7-F1-model_v4 Two-component system response regulator 0.9894 2 68 GO:0000160
AF-A0A7R8ZVL0-F1-model_v4 Response regulatory domain-containing protein 0.9858 1 68 GO:0000160
AF-A0A2V9EZN5-F1-model_v4 Diguanylate cyclase 0.9767 2 117 GO:0000160
AF-A0A7X7DME9-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9737 1 117 GO:0000155
AF-A0A3E1D0H6-F1-model_v4 Diguanylate cyclase (GGDEF) domain-containing protein 0.9728 2 117 GO:0000160
GO:0005524
GO:0016301

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pLDDT pTM Quality
90.25 0.85 High
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Predicted Structure (AlphaFold2)

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