F384251

General Info

Members Datasets Scaffolds Average Seq Length
281 167 275 354

Family's Representative Sequence

Representative Sequence 3300009101|Ga0105247_10001884|Ga0105247_1000188417
Length 383
Sequence VQSKRICAFAHSHNLFFSLCSLLNTFAPAMMNSLPKGQKAVAIWIYIGVAMLVIQVILGGITRLTGSGLSITEWKVVEGFLPPLNEQDWMAAFAKYRQTPQYLLLNSDFSISNYKFIYFWEWFHREWARLISIVFVVGFIYLLAKKYLQAYMIKPLLILFLLGAIQGAIGWIMVKSGLTDDMIYVKPLKLALHFVFALMLICYAWWFALELSVPRRQIANSQSVRGYTWLITGVLFFQLIYGALMAGHKAATAAPTWPTINGSWLPQHLFTPAVNVLENKITVHFIHRGLAYILVLLTILWTFKTLQVISASVLLKKTKWLPVFLILLQVLLGILAVLSSPYIVANHWGLFDWLAQLHQVVAMLYLLTMVWMLYIIRNRKTAV

Samples

Sample ID Description Type Environment
1 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
2 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
3 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
4 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
5 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
6 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
7 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
12 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
13 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
24 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
28 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
29 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
30 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
31 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
32 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
39 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
40 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
81 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
87 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
89 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
129 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
130 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
131 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
132 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
145 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
153 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
154 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
155 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
156 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
157 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
158 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
161 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
162 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
165 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
166 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
167 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.86
Metatranscriptomes 0
Isolates 2.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.3
Nodule 0
Rhizoplane 0
Rhizosphere 81.14
Stem 0
Stem Tuber 0
Unclassified 3.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10040536 3300001990 Bacteria 1429
2 JGI25153J46596_10008533 3300003215 Bacteria 4883
3 rootH2_10033534 3300003320 Bacteria 10578
4 rootH1_10007795 3300003323 Bacteria 36145
5 rootH1_10173861 3300003323 Bacteria 10092
6 rootH1_10319690 3300003323 Bacteria 1640
7 JGI25160J50197_1003837 3300003354 Bacteria 6603
8 Ga0055535_1007388 3300003761 Bacteria 2105
9 Ga0055542_1003343 3300003762 Bacteria 4420
10 Ga0055526_1009766 3300003771 Bacteria 4563
11 Ga0055528_1000327 3300003790 Bacteria 39958
12 Ga0055530_10000102 3300003791 Bacteria 72819
13 Ga0055531_10012521 3300003794 Bacteria 3982
14 Ga0065165_1000027 3300005262 Bacteria 228507
15 Ga0070658_10106992 3300005327 Bacteria 2314
16 Ga0070658_10187566 3300005327 Bacteria 1742
17 Ga0070683_100101776 3300005329 Bacteria 2705
18 Ga0070683_100298641 3300005329 Bacteria 1532
19 Ga0070670_100182458 3300005331 Bacteria 1822
20 Ga0068869_100021425 3300005334 Bacteria 4446
21 Ga0068869_100022033 3300005334 Bacteria 4386
22 Ga0068869_100080894 3300005334 Bacteria 2425
23 Ga0070666_10000126 3300005335 Bacteria 53667
24 Ga0070680_100335376 3300005336 Bacteria 1284
25 Ga0068868_100018766 3300005338 Bacteria 5173
26 Ga0070660_100004167 3300005339 Bacteria 9984
27 Ga0070660_100066939 3300005339 Bacteria 2798
28 Ga0070689_100043176 3300005340 Bacteria 3464
29 Ga0070687_100003392 3300005343 Bacteria 6184
30 Ga0070669_100029713 3300005353 Bacteria 3942
31 Ga0070675_100032688 3300005354 Bacteria 4212
32 Ga0070675_100038249 3300005354 Bacteria 3910
33 Ga0070671_100086965 3300005355 Unclassified 2616
34 Ga0070674_100025740 3300005356 Bacteria 3834
35 Ga0070674_100143247 3300005356 Bacteria 1796
36 Ga0070673_100014705 3300005364 Bacteria 5466
37 Ga0070659_100008497 3300005366 Bacteria 7503
38 Ga0070659_100030720 3300005366 Bacteria 4158
39 Ga0070667_100013166 3300005367 Bacteria 6838
40 Ga0070667_100022492 3300005367 Bacteria 5228
41 Ga0070667_100184083 3300005367 Bacteria 1848
42 Ga0070667_100226527 3300005367 Bacteria 1665
43 Ga0070700_100164878 3300005441 Bacteria 1529
44 Ga0070663_100011414 3300005455 Bacteria 5576
45 Ga0070681_10071031 3300005458 Bacteria 3446
46 Ga0070681_10072034 3300005458 Bacteria 3419
47 Ga0068867_100136918 3300005459 Bacteria 1910
48 Ga0070685_10033830 3300005466 Bacteria 2875
49 Ga0070679_100000216 3300005530 Bacteria 46886
50 Ga0070679_100006340 3300005530 Bacteria 11014
51 Ga0070679_100057409 3300005530 Bacteria 3880
52 Ga0070679_100071883 3300005530 Bacteria 3451
53 Ga0068853_100041490 3300005539 Bacteria 3931
54 Ga0068853_100054817 3300005539 Unclassified 3436
55 Ga0070686_100016136 3300005544 Bacteria 4340
56 Ga0068855_100000189 3300005563 Bacteria 79227
57 Ga0068855_100023710 3300005563 Bacteria 7349
58 Ga0068855_100069508 3300005563 Unclassified 4098
59 Ga0068855_100193259 3300005563 Bacteria 2294
60 Ga0068857_100025411 3300005577 Bacteria 5215
61 Ga0068857_100031046 3300005577 Bacteria 4722
62 Ga0068854_100112567 3300005578 Bacteria 2055
63 Ga0068856_100005092 3300005614 Bacteria 12994
64 Ga0068852_100003287 3300005616 Bacteria 11289
65 Ga0068852_100022751 3300005616 Bacteria 5032
66 Ga0068852_100251277 3300005616 Bacteria 1694
67 Ga0068859_100000003 3300005617 Bacteria 479218
68 Ga0068859_100016605 3300005617 Bacteria 7391
69 Ga0068864_100007444 3300005618 Bacteria 9016
70 Ga0068864_100369391 3300005618 Bacteria 1357
71 Ga0068861_100001764 3300005719 Bacteria 13901
72 Ga0068861_100017202 3300005719 Bacteria 5126
73 Ga0068863_100005585 3300005841 Bacteria 12361
74 Ga0068863_100018058 3300005841 Bacteria 6754
75 Ga0068863_100209458 3300005841 Bacteria 1877
76 Ga0068858_100013747 3300005842 Bacteria 7641
77 Ga0068860_100003400 3300005843 Bacteria 16366
78 Ga0068860_100014498 3300005843 Bacteria 7714
79 Ga0068860_100211971 3300005843 Bacteria 1879
80 Ga0068862_100025222 3300005844 Bacteria 4991
81 Ga0068862_100073469 3300005844 Unclassified 2955
82 Ga0075366_10096064 3300006195 Bacteria 1777
83 Ga0097621_100024129 3300006237 Bacteria 4745
84 Ga0097621_100129724 3300006237 Bacteria 2145
85 Ga0068871_100023041 3300006358 Bacteria 4809
86 Ga0068865_100068401 3300006881 Bacteria 2511
87 Ga0097620_100000003 3300006931 Bacteria 479218
88 Ga0097620_100016605 3300006931 Bacteria 7391
89 Ga0105245_10040735 3300009098 Bacteria 4139
90 Ga0105247_10001884 3300009101 Bacteria 14669
91 Ga0105247_10091055 3300009101 Bacteria 1936
92 Ga0114129_10018358 3300009147 Bacteria 9962
93 Ga0105241_10001052 3300009174 Bacteria 21045
94 Ga0105242_10061210 3300009176 Bacteria 3096
95 Ga0105242_10345747 3300009176 Unclassified 1372
96 Ga0105237_10011680 3300009545 Bacteria 9291
97 Ga0105237_10116227 3300009545 Unclassified 2668
98 Ga0105249_10007824 3300009553 Bacteria 9307
99 Ga0105249_10115031 3300009553 Bacteria 2548
100 Ga0157373_10007969 3300013100 Bacteria 7877
101 Ga0157373_10089254 3300013100 Bacteria 2171
102 Ga0157371_10000518 3300013102 Bacteria 46197
103 Ga0157371_10000650 3300013102 Bacteria 41165
104 Ga0157371_10000898 3300013102 Bacteria 33500
105 Ga0157371_10001280 3300013102 Bacteria 26535
106 Ga0157371_10001795 3300013102 Bacteria 21712
107 Ga0157371_10013761 3300013102 Bacteria 6131
108 Ga0157371_10017048 3300013102 Bacteria 5405
109 Ga0157371_10024849 3300013102 Bacteria 4371
110 Ga0157371_10055712 3300013102 Bacteria 2805
111 Ga0157371_10062218 3300013102 Bacteria 2646
112 Ga0157370_10000313 3300013104 Bacteria 60838
113 Ga0157370_10000478 3300013104 Bacteria 49942
114 Ga0157370_10003609 3300013104 Bacteria 18099
115 Ga0157370_10122962 3300013104 Bacteria 2423
116 Ga0157369_10015979 3300013105 Bacteria 8446
117 Ga0157369_10017918 3300013105 Bacteria 7950
118 Ga0157369_10062279 3300013105 Unclassified 4021
119 Ga0157369_10158202 3300013105 Bacteria 2392
120 Ga0157374_10064184 3300013296 Bacteria 3445
121 Ga0157374_10110309 3300013296 Bacteria 2646
122 Ga0157374_10121489 3300013296 Bacteria 2521
123 Ga0157378_10011812 3300013297 Bacteria 7646
124 Ga0157378_10077067 3300013297 Bacteria 3005
125 Ga0157378_10340365 3300013297 Bacteria 1463
126 Ga0163162_10000446 3300013306 Bacteria 38191
127 Ga0163162_10001945 3300013306 Bacteria 19409
128 Ga0163162_10002392 3300013306 Bacteria 17651
129 Ga0157372_10023200 3300013307 Bacteria 6724
130 Ga0157372_10032045 3300013307 Bacteria 5759
131 Ga0157372_10085810 3300013307 Bacteria 3571
132 Ga0157372_10095581 3300013307 Bacteria 3385
133 Ga0157375_10260913 3300013308 Bacteria 1894
134 Ga0157377_10046205 3300014745 Bacteria 2434
135 Ga0157379_10053393 3300014968 Bacteria 3609
136 Ga0157376_10000952 3300014969 Bacteria 18849
137 Ga0157376_10275901 3300014969 Unclassified 1581
138 Ga0209436_100696 3300025208 Bacteria 14180
139 Ga0209258_100032 3300025242 Bacteria 452764
140 Ga0209148_1000131 3300025254 Bacteria 174079
141 Ga0209673_1000078 3300025273 Bacteria 227727
142 Ga0209673_1022056 3300025273 Bacteria 2207
143 Ga0209130_1000679 3300025284 Bacteria 30691
144 Ga0209564_1002050 3300025295 Bacteria 17360
145 Ga0209564_1005553 3300025295 Bacteria 7138
146 Ga0209758_1004649 3300025297 Bacteria 11244
147 Ga0209758_1007703 3300025297 Bacteria 7235
148 Ga0209050_1000097 3300025298 Bacteria 239919
149 Ga0207426_1000033 3300025302 Bacteria 455976
150 Ga0207426_1008957 3300025302 Bacteria 3992
151 Ga0207426_1013658 3300025302 Bacteria 3000
152 Ga0209257_1001349 3300025304 Bacteria 29771
153 Ga0207710_10007681 3300025900 Bacteria 4561
154 Ga0207688_10019001 3300025901 Bacteria 3739
155 Ga0207680_10000054 3300025903 Bacteria 54305
156 Ga0207647_10033182 3300025904 Bacteria 3307
157 Ga0207705_10004508 3300025909 Bacteria 10526
158 Ga0207705_10053344 3300025909 Bacteria 2912
159 Ga0207705_10061394 3300025909 Unclassified 2715
160 Ga0207705_10146943 3300025909 Bacteria 1764
161 Ga0207654_10007332 3300025911 Bacteria 5555
162 Ga0207707_10054834 3300025912 Bacteria 3469
163 Ga0207707_10054953 3300025912 Bacteria 3465
164 Ga0207707_10055627 3300025912 Bacteria 3441
165 Ga0207695_10046088 3300025913 Unclassified 4623
166 Ga0207671_10003032 3300025914 Bacteria 17202
167 Ga0207671_10071926 3300025914 Unclassified 2580
168 Ga0207660_10002218 3300025917 Bacteria 12857
169 Ga0207660_10069926 3300025917 Bacteria 2550
170 Ga0207662_10017769 3300025918 Bacteria 4026
171 Ga0207657_10031042 3300025919 Bacteria 4844
172 Ga0207657_10032237 3300025919 Bacteria 4737
173 Ga0207657_10055066 3300025919 Bacteria 3437
174 Ga0207652_10000090 3300025921 Bacteria 99245
175 Ga0207652_10000999 3300025921 Bacteria 26089
176 Ga0207652_10011138 3300025921 Bacteria 7249
177 Ga0207652_10016358 3300025921 Bacteria 6055
178 Ga0207652_10098199 3300025921 Bacteria 2582
179 Ga0207652_10106632 3300025921 Bacteria 2480
180 Ga0207644_10068681 3300025931 Unclassified 2586
181 Ga0207690_10006109 3300025932 Bacteria 7137
182 Ga0207690_10006541 3300025932 Bacteria 6911
183 Ga0207686_10072393 3300025934 Bacteria 2221
184 Ga0207669_10207634 3300025937 Bacteria 1427
185 Ga0207689_10003117 3300025942 Bacteria 15212
186 Ga0207689_10094644 3300025942 Bacteria 2453
187 Ga0207661_10023941 3300025944 Bacteria 4620
188 Ga0207661_10209166 3300025944 Bacteria 1719
189 Ga0207679_10058175 3300025945 Bacteria 2863
190 Ga0207667_10002948 3300025949 Bacteria 21118
191 Ga0207667_10027442 3300025949 Bacteria 6197
192 Ga0207667_10565657 3300025949 Bacteria 1149
193 Ga0207712_10028113 3300025961 Bacteria 3759
194 Ga0207712_10049561 3300025961 Bacteria 2927
195 Ga0207668_10067886 3300025972 Bacteria 2533
196 Ga0207640_10122335 3300025981 Bacteria 1867
197 Ga0207658_10010424 3300025986 Bacteria 6312
198 Ga0207658_10061955 3300025986 Bacteria 2798
199 Ga0207703_10010282 3300026035 Bacteria 7328
200 Ga0207639_10084728 3300026041 Unclassified 2518
201 Ga0207678_10017460 3300026067 Bacteria 6303
202 Ga0207678_10093802 3300026067 Bacteria 2564
203 Ga0207708_10225028 3300026075 Bacteria 1505
204 Ga0207702_10012919 3300026078 Bacteria 6946
205 Ga0207641_10000026 3300026088 Bacteria 245091
206 Ga0207641_10274957 3300026088 Bacteria 1582
207 Ga0207648_10094975 3300026089 Unclassified 2607
208 Ga0207676_10022085 3300026095 Bacteria 4678
209 Ga0207674_10032989 3300026116 Bacteria 5426
210 Ga0207674_10070864 3300026116 Bacteria 3504
211 Ga0207675_100004328 3300026118 Bacteria 13719
212 Ga0207675_100041693 3300026118 Bacteria 4286
213 Ga0207698_10015554 3300026142 Bacteria 5098
214 Ga0207698_10137301 3300026142 Bacteria 2100
215 Ga0207698_10360203 3300026142 Bacteria 1377
216 Ga0268265_10012445 3300028380 Bacteria 5766
217 Ga0268264_10000558 3300028381 Bacteria 45913
218 Ga0268264_10010291 3300028381 Bacteria 7740
219 Ga0307515_10007482 3300028794 Bacteria 21576
220 Ga0265327_10015271 3300031251 Bacteria 4969
221 Ga0307513_10132364 3300031456 Bacteria 2436
222 Ga0307509_10085668 3300031507 Bacteria 3242
223 Ga0373925_0155546 3300037068 Bacteria 1798
224 Ga0395899_0003737 3300037312 Bacteria 12022
225 Ga0395899_0046118 3300037312 Bacteria 3246
226 Ga0395899_0046595 3300037312 Bacteria 3229
227 Ga0395899_0051967 3300037312 Bacteria 3039
228 Ga0395900_0000927 3300037418 Bacteria 38470
229 Ga0395900_0024957 3300037418 Bacteria 6117
230 Ga0395900_0049145 3300037418 Bacteria 4344
231 Ga0395898_0009829 3300037466 Bacteria 10028
232 Ga0395898_0033130 3300037466 Bacteria 5157
233 Ga0395898_0045138 3300037466 Bacteria 4332
234 Ga0395898_0089587 3300037466 Bacteria 2960
235 Ga0395905_0019888 3300037471 Bacteria 6362
236 Ga0395901_0001347 3300038443 Bacteria 25756
237 Ga0395901_0010081 3300038443 Bacteria 9575
238 Ga0395901_0159944 3300038443 Bacteria 2365
239 Ga0395901_0186063 3300038443 Bacteria 2178
240 Ga0395901_0198118 3300038443 Bacteria 2105
241 Ga0466959_0034955 3300045049 Bacteria 3717
242 Ga0495633_0000133 3300046558 Bacteria 100207
243 Ga0495668_0001026 3300046616 Bacteria 29649
244 Ga0495668_0002875 3300046616 Bacteria 13651
245 Ga0495686_0000265 3300047472 Bacteria 93838
246 Ga0501033_0109532 3300049570 Bacteria 2011
247 Ga0501038_0121343 3300049574 Bacteria 2155
248 Ga0501219_000615 3300049703 Bacteria 5118
249 Ga0501269_002813 3300049766 Bacteria 2120
250 Ga0501035_0038203 3300049822 Unclassified 4347
251 Ga0501044_0080249 3300049823 Bacteria 3305
252 Ga0501044_0177299 3300049823 Bacteria 2100
253 Ga0501044_0222353 3300049823 Bacteria 1839
254 Ga0501044_0384897 3300049823 Bacteria 1317
255 Ga0501284_00002 3300050005 Bacteria 220402
256 nmdc:mga0k408_72449_c1 3300050493 Bacteria 2012
257 nmdc:mga05p37_13430_c1 3300050507 Bacteria 9815
258 nmdc:mga08y16_37673_c1 3300050511 Bacteria 5076
259 Ga0500583_0012014 3300053092 Bacteria 3288
260 Ga0500651_0072225 3300053093 Unclassified 2146
261 Ga0500660_048113 3300053100 Bacteria 2126
262 Ga0500569_000054 3300053109 Bacteria 20299
263 Ga0500607_020362 3300053121 Bacteria 3745
264 Ga0500655_014872 3300053133 Unclassified 1425
265 Ga0500658_0045222 3300053134 Bacteria 1779
266 Ga0500559_0046937 3300053136 Bacteria 1896
267 Ga0500577_0000168 3300053142 Bacteria 16566
268 Ga0500588_0008437 3300053146 Bacteria 2406
269 Ga0500590_044992 3300053148 Bacteria 2261
270 Ga0500616_0005549 3300053153 Bacteria 8540
271 Ga0500616_0027538 3300053153 Bacteria 3137
272 Ga0500627_0000480 3300053158 Bacteria 10818
273 Ga0500633_0000092 3300053160 Bacteria 12594
274 Ga0500636_0005904 3300053177 Bacteria 7019
275 Ga0500661_001764 3300055283 Bacteria 4075

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005367 Ga0070667_100013166 Ga0070667_1000131662 304
2 3300005617 Ga0068859_100016605 Ga0068859_1000166054 304
3 3300006931 Ga0097620_100016605 Ga0097620_1000166054 304
4 3300025986 Ga0207658_10010424 Ga0207658_100104242 304
5 3300049823 Ga0501044_0222353 Ga0501044_0222353_416_1462 306
6 3300005354 Ga0070675_100038249 Ga0070675_1000382492 310
7 3300005441 Ga0070700_100164878 Ga0070700_1001648781 310
8 3300026075 Ga0207708_10225028 Ga0207708_102250281 310
9 3300050511 nmdc:mga08y16_37673_c1 nmdc:mga08y16_37673_c1_332_1360 312
10 3300031251 Ga0265327_10015271 Ga0265327_100152712 315
11 3300009553 Ga0105249_10115031 Ga0105249_101150312 316
12 3300005577 Ga0068857_100025411 Ga0068857_1000254113 320
13 3300026116 Ga0207674_10032989 Ga0207674_100329892 320
14 3300005354 Ga0070675_100032688 Ga0070675_1000326882 321
15 3300005356 Ga0070674_100143247 Ga0070674_1001432472 321
16 3300005367 Ga0070667_100184083 Ga0070667_1001840832 321
17 3300006237 Ga0097621_100129724 Ga0097621_1001297242 321
18 3300013306 Ga0163162_10000446 Ga0163162_1000044631 321
19 3300028381 Ga0268264_10000558 Ga0268264_100005587 321
20 3300037068 Ga0373925_0155546 Ga0373925_0155546_393_1481 323
21 3300037312 Ga0395899_0003737 Ga0395899_0003737_8235_9302 323
22 3300037418 Ga0395900_0000927 Ga0395900_0000927_14989_16056 323
23 3300037466 Ga0395898_0009829 Ga0395898_0009829_1275_2342 323
24 3300038443 Ga0395901_0010081 Ga0395901_0010081_6552_7619 323
25 3300003320 rootH2_10033534 rootH2_100335344 325
26 3300003323 rootH1_10007795 rootH1_100077953 325
27 3300031456 Ga0307513_10132364 Ga0307513_101323642 326
28 3300046616 Ga0495668_0002875 Ga0495668_0002875_2106_3224 326
29 3300005327 Ga0070658_10187566 Ga0070658_101875661 327
30 3300005458 Ga0070681_10072034 Ga0070681_100720342 327
31 3300005530 Ga0070679_100006340 Ga0070679_1000063404 327
32 3300005578 Ga0068854_100112567 Ga0068854_1001125672 327
33 3300005616 Ga0068852_100003287 Ga0068852_10000328712 327
34 3300013102 Ga0157371_10024849 Ga0157371_100248493 327
35 3300013104 Ga0157370_10122962 Ga0157370_101229622 327
36 3300025909 Ga0207705_10061394 Ga0207705_100613944 327
37 3300025909 Ga0207705_10146943 Ga0207705_101469432 327
38 3300025919 Ga0207657_10031042 Ga0207657_100310423 327
39 3300025921 Ga0207652_10011138 Ga0207652_100111385 327
40 3300025944 Ga0207661_10209166 Ga0207661_102091662 327
41 3300025981 Ga0207640_10122335 Ga0207640_101223352 327
42 3300026142 Ga0207698_10137301 Ga0207698_101373012 327
43 3300031507 Ga0307509_10085668 Ga0307509_100856683 327
44 3300013102 Ga0157371_10013761 Ga0157371_100137612 328
45 3300014969 Ga0157376_10275901 Ga0157376_102759012 328
46 3300053146 Ga0500588_0008437 Ga0500588_0008437_884_1936 328
47 iso_pu_bacteria 2884791551 2884796652 328
48 3300005353 Ga0070669_100029713 Ga0070669_1000297132 330
49 3300005719 Ga0068861_100001764 Ga0068861_1000017646 330
50 3300013104 Ga0157370_10003609 Ga0157370_100036092 330
51 3300026118 Ga0207675_100004328 Ga0207675_1000043288 330
52 3300053121 Ga0500607_020362 Ga0500607_020362_318_1364 330
53 3300053148 Ga0500590_044992 Ga0500590_044992_635_1681 330
54 3300053177 Ga0500636_0005904 Ga0500636_0005904_2188_3234 330
55 3300005334 Ga0068869_100021425 Ga0068869_1000214252 331
56 3300005335 Ga0070666_10000126 Ga0070666_100001263 331
57 3300005356 Ga0070674_100025740 Ga0070674_1000257403 331
58 3300005367 Ga0070667_100022492 Ga0070667_1000224924 331
59 3300005466 Ga0070685_10033830 Ga0070685_100338302 331
60 3300005616 Ga0068852_100022751 Ga0068852_1000227512 331
61 3300005617 Ga0068859_100000003 Ga0068859_10000000380 331
62 3300005618 Ga0068864_100007444 Ga0068864_1000074447 331
63 3300005841 Ga0068863_100005585 Ga0068863_1000055852 331
64 3300005842 Ga0068858_100013747 Ga0068858_1000137472 331
65 3300005843 Ga0068860_100003400 Ga0068860_10000340015 331
66 3300006237 Ga0097621_100024129 Ga0097621_1000241294 331
67 3300006358 Ga0068871_100023041 Ga0068871_1000230414 331
68 3300006931 Ga0097620_100000003 Ga0097620_10000000380 331
69 3300009098 Ga0105245_10040735 Ga0105245_100407353 331
70 3300009101 Ga0105247_10001884 Ga0105247_1000188417 331
71 3300009174 Ga0105241_10001052 Ga0105241_100010523 331
72 3300009176 Ga0105242_10061210 Ga0105242_100612101 331
73 3300009176 Ga0105242_10345747 Ga0105242_103457472 331
74 3300009545 Ga0105237_10011680 Ga0105237_100116808 331
75 3300009553 Ga0105249_10007824 Ga0105249_100078243 331
76 3300013296 Ga0157374_10064184 Ga0157374_100641842 331
77 3300013297 Ga0157378_10077067 Ga0157378_100770672 331
78 3300013306 Ga0163162_10001945 Ga0163162_1000194514 331
79 3300014968 Ga0157379_10053393 Ga0157379_100533932 331
80 3300014969 Ga0157376_10000952 Ga0157376_1000095218 331
81 3300025900 Ga0207710_10007681 Ga0207710_100076814 331
82 3300025903 Ga0207680_10000054 Ga0207680_1000005413 331
83 3300025904 Ga0207647_10033182 Ga0207647_100331822 331
84 3300025911 Ga0207654_10007332 Ga0207654_100073323 331
85 3300025914 Ga0207671_10003032 Ga0207671_100030322 331
86 3300025934 Ga0207686_10072393 Ga0207686_100723931 331
87 3300025961 Ga0207712_10049561 Ga0207712_100495612 331
88 3300026035 Ga0207703_10010282 Ga0207703_100102822 331
89 3300026088 Ga0207641_10000026 Ga0207641_1000002671 331
90 3300026142 Ga0207698_10015554 Ga0207698_100155544 331
91 3300028794 Ga0307515_10007482 Ga0307515_1000748210 331
92 3300005331 Ga0070670_100182458 Ga0070670_1001824582 332
93 3300005338 Ga0068868_100018766 Ga0068868_1000187663 332
94 3300005539 Ga0068853_100041490 Ga0068853_1000414903 332
95 3300005616 Ga0068852_100251277 Ga0068852_1002512772 332
96 3300013308 Ga0157375_10260913 Ga0157375_102609132 332
97 3300025208 Ga0209436_100696 Ga0209436_1006963 332
98 3300025284 Ga0209130_1000679 Ga0209130_100067925 332
99 3300025302 Ga0207426_1000033 Ga0207426_100003365 332
100 3300025931 Ga0207644_10068681 Ga0207644_100686812 332
101 3300026142 Ga0207698_10360203 Ga0207698_103602032 332
102 3300046558 Ga0495633_0000133 Ga0495633_0000133_24818_25870 332
103 iso_pu_bacteria 2881955468 2881958199 332
104 iso_pu_bacteria 2929177148 2929177828 332
105 iso_pu_bacteria 2945977869 2945980176 332
106 iso_pu_bacteria 2946013367 2946013962 332
107 3300003323 rootH1_10319690 rootH1_103196902 333
108 3300005530 Ga0070679_100057409 Ga0070679_1000574092 333
109 3300005539 Ga0068853_100054817 Ga0068853_1000548171 333
110 3300009545 Ga0105237_10116227 Ga0105237_101162272 333
111 3300013105 Ga0157369_10062279 Ga0157369_100622792 333
112 3300025913 Ga0207695_10046088 Ga0207695_100460884 333
113 3300025914 Ga0207671_10071926 Ga0207671_100719262 333
114 3300025921 Ga0207652_10098199 Ga0207652_100981993 333
115 3300025949 Ga0207667_10027442 Ga0207667_100274424 333
116 3300026041 Ga0207639_10084728 Ga0207639_100847283 333
117 3300053158 Ga0500627_0000480 Ga0500627_0000480_3283_4377 333
118 3300003323 rootH1_10173861 rootH1_101738614 334
119 3300003761 Ga0055535_1007388 Ga0055535_10073882 334
120 3300003762 Ga0055542_1003343 Ga0055542_10033432 334
121 3300005334 Ga0068869_100080894 Ga0068869_1000808942 334
122 3300005367 Ga0070667_100226527 Ga0070667_1002265272 334
123 3300005618 Ga0068864_100369391 Ga0068864_1003693912 334
124 3300005841 Ga0068863_100209458 Ga0068863_1002094582 334
125 3300005843 Ga0068860_100014498 Ga0068860_1000144986 334
126 3300005844 Ga0068862_100073469 Ga0068862_1000734692 334
127 3300013102 Ga0157371_10000518 Ga0157371_1000051835 334
128 3300013102 Ga0157371_10017048 Ga0157371_100170483 334
129 3300025242 Ga0209258_100032 Ga0209258_100032410 334
130 3300025254 Ga0209148_1000131 Ga0209148_100013184 334
131 3300025942 Ga0207689_10094644 Ga0207689_100946442 334
132 3300025986 Ga0207658_10061955 Ga0207658_100619552 334
133 3300026088 Ga0207641_10274957 Ga0207641_102749571 334
134 3300026089 Ga0207648_10094975 Ga0207648_100949752 334
135 3300028380 Ga0268265_10012445 Ga0268265_100124452 334
136 3300028381 Ga0268264_10010291 Ga0268264_100102914 334
137 3300047472 Ga0495686_0000265 Ga0495686_0000265_32260_33357 334
138 3300053092 Ga0500583_0012014 Ga0500583_0012014_1224_2270 334
139 3300053093 Ga0500651_0072225 Ga0500651_0072225_331_1377 334
140 3300053100 Ga0500660_048113 Ga0500660_048113_60_1106 334
141 3300053109 Ga0500569_000054 Ga0500569_000054_13385_14431 334
142 3300053133 Ga0500655_014872 Ga0500655_014872_54_1100 334
143 3300053134 Ga0500658_0045222 Ga0500658_0045222_326_1372 334
144 3300053142 Ga0500577_0000168 Ga0500577_0000168_11668_12714 334
145 3300053153 Ga0500616_0005549 Ga0500616_0005549_1677_2723 334
146 3300053160 Ga0500633_0000092 Ga0500633_0000092_10479_11525 334
147 iso_pu_bacteria 2929239360 2929240186 334
148 3300005327 Ga0070658_10106992 Ga0070658_101069922 335
149 3300005329 Ga0070683_100101776 Ga0070683_1001017762 335
150 3300005329 Ga0070683_100298641 Ga0070683_1002986412 335
151 3300005334 Ga0068869_100022033 Ga0068869_1000220332 335
152 3300005336 Ga0070680_100335376 Ga0070680_1003353761 335
153 3300005339 Ga0070660_100004167 Ga0070660_1000041678 335
154 3300005339 Ga0070660_100066939 Ga0070660_1000669392 335
155 3300005355 Ga0070671_100086965 Ga0070671_1000869652 335
156 3300005366 Ga0070659_100008497 Ga0070659_1000084976 335
157 3300005366 Ga0070659_100030720 Ga0070659_1000307202 335
158 3300005455 Ga0070663_100011414 Ga0070663_1000114144 335
159 3300005458 Ga0070681_10071031 Ga0070681_100710313 335
160 3300005459 Ga0068867_100136918 Ga0068867_1001369181 335
161 3300005530 Ga0070679_100000216 Ga0070679_10000021632 335
162 3300005530 Ga0070679_100071883 Ga0070679_1000718832 335
163 3300005563 Ga0068855_100000189 Ga0068855_10000018945 335
164 3300005563 Ga0068855_100023710 Ga0068855_1000237103 335
165 3300005563 Ga0068855_100069508 Ga0068855_1000695083 335
166 3300005563 Ga0068855_100193259 Ga0068855_1001932591 335
167 3300005577 Ga0068857_100031046 Ga0068857_1000310465 335
168 3300005614 Ga0068856_100005092 Ga0068856_10000509214 335
169 3300005719 Ga0068861_100017202 Ga0068861_1000172025 335
170 3300005841 Ga0068863_100018058 Ga0068863_1000180583 335
171 3300005844 Ga0068862_100025222 Ga0068862_1000252223 335
172 3300006881 Ga0068865_100068401 Ga0068865_1000684012 335
173 3300009101 Ga0105247_10091055 Ga0105247_100910552 335
174 3300013100 Ga0157373_10007969 Ga0157373_100079698 335
175 3300013100 Ga0157373_10089254 Ga0157373_100892542 335
176 3300013102 Ga0157371_10000650 Ga0157371_1000065021 335
177 3300013102 Ga0157371_10000898 Ga0157371_1000089828 335
178 3300013102 Ga0157371_10001280 Ga0157371_1000128028 335
179 3300013102 Ga0157371_10001795 Ga0157371_1000179517 335
180 3300013102 Ga0157371_10055712 Ga0157371_100557122 335
181 3300013104 Ga0157370_10000313 Ga0157370_1000031311 335
182 3300013104 Ga0157370_10000478 Ga0157370_1000047812 335
183 3300013105 Ga0157369_10015979 Ga0157369_100159799 335
184 3300013105 Ga0157369_10017918 Ga0157369_100179188 335
185 3300013105 Ga0157369_10158202 Ga0157369_101582021 335
186 3300013296 Ga0157374_10110309 Ga0157374_101103093 335
187 3300013296 Ga0157374_10121489 Ga0157374_101214891 335
188 3300013297 Ga0157378_10340365 Ga0157378_103403652 335
189 3300013307 Ga0157372_10023200 Ga0157372_100232002 335
190 3300013307 Ga0157372_10032045 Ga0157372_100320452 335
191 3300013307 Ga0157372_10085810 Ga0157372_100858104 335
192 3300013307 Ga0157372_10095581 Ga0157372_100955813 335
193 3300025909 Ga0207705_10004508 Ga0207705_100045089 335
194 3300025909 Ga0207705_10053344 Ga0207705_100533443 335
195 3300025912 Ga0207707_10054834 Ga0207707_100548343 335
196 3300025912 Ga0207707_10054953 Ga0207707_100549533 335
197 3300025912 Ga0207707_10055627 Ga0207707_100556274 335
198 3300025917 Ga0207660_10002218 Ga0207660_1000221812 335
199 3300025917 Ga0207660_10069926 Ga0207660_100699261 335
200 3300025919 Ga0207657_10032237 Ga0207657_100322373 335
201 3300025919 Ga0207657_10055066 Ga0207657_100550662 335
202 3300025921 Ga0207652_10000090 Ga0207652_1000009063 335
203 3300025921 Ga0207652_10000999 Ga0207652_1000099926 335
204 3300025921 Ga0207652_10016358 Ga0207652_100163586 335
205 3300025921 Ga0207652_10106632 Ga0207652_101066322 335
206 3300025932 Ga0207690_10006109 Ga0207690_100061096 335
207 3300025932 Ga0207690_10006541 Ga0207690_100065415 335
208 3300025942 Ga0207689_10003117 Ga0207689_100031177 335
209 3300025944 Ga0207661_10023941 Ga0207661_100239412 335
210 3300025949 Ga0207667_10002948 Ga0207667_1000294816 335
211 3300025949 Ga0207667_10565657 Ga0207667_105656571 335
212 3300025961 Ga0207712_10028113 Ga0207712_100281133 335
213 3300025972 Ga0207668_10067886 Ga0207668_100678862 335
214 3300026067 Ga0207678_10017460 Ga0207678_100174602 335
215 3300026067 Ga0207678_10093802 Ga0207678_100938022 335
216 3300026078 Ga0207702_10012919 Ga0207702_100129193 335
217 3300026095 Ga0207676_10022085 Ga0207676_100220853 335
218 3300026116 Ga0207674_10070864 Ga0207674_100708642 335
219 3300026118 Ga0207675_100041693 Ga0207675_1000416933 335
220 3300037312 Ga0395899_0046118 Ga0395899_0046118_90_1157 335
221 3300037312 Ga0395899_0046595 Ga0395899_0046595_1939_3006 335
222 3300037312 Ga0395899_0051967 Ga0395899_0051967_1809_2876 335
223 3300037418 Ga0395900_0024957 Ga0395900_0024957_4611_5678 335
224 3300037418 Ga0395900_0049145 Ga0395900_0049145_885_1952 335
225 3300037466 Ga0395898_0033130 Ga0395898_0033130_3874_4941 335
226 3300037466 Ga0395898_0045138 Ga0395898_0045138_3171_4238 335
227 3300037466 Ga0395898_0089587 Ga0395898_0089587_1455_2522 335
228 3300037471 Ga0395905_0019888 Ga0395905_0019888_2627_3694 335
229 3300038443 Ga0395901_0001347 Ga0395901_0001347_17910_18977 335
230 3300038443 Ga0395901_0159944 Ga0395901_0159944_1034_2179 335
231 3300038443 Ga0395901_0186063 Ga0395901_0186063_882_1949 335
232 3300038443 Ga0395901_0198118 Ga0395901_0198118_645_1712 335
233 3300049570 Ga0501033_0109532 Ga0501033_0109532_627_1694 335
234 3300049574 Ga0501038_0121343 Ga0501038_0121343_318_1385 335
235 3300049822 Ga0501035_0038203 Ga0501035_0038203_2833_3900 335
236 3300049823 Ga0501044_0177299 Ga0501044_0177299_783_1904 335
237 3300049823 Ga0501044_0384897 Ga0501044_0384897_162_1229 335
238 3300005340 Ga0070689_100043176 Ga0070689_1000431762 336
239 3300005343 Ga0070687_100003392 Ga0070687_1000033922 336
240 3300005364 Ga0070673_100014705 Ga0070673_1000147053 336
241 3300005544 Ga0070686_100016136 Ga0070686_1000161363 336
242 3300013297 Ga0157378_10011812 Ga0157378_100118124 336
243 3300014745 Ga0157377_10046205 Ga0157377_100462051 336
244 3300025901 Ga0207688_10019001 Ga0207688_100190013 336
245 3300025918 Ga0207662_10017769 Ga0207662_100177694 336
246 3300025937 Ga0207669_10207634 Ga0207669_102076342 336
247 3300025945 Ga0207679_10058175 Ga0207679_100581752 336
248 3300055283 Ga0500661_001764 Ga0500661_001764_723_1775 336
249 3300005843 Ga0068860_100211971 Ga0068860_1002119712 337
250 3300013306 Ga0163162_10002392 Ga0163162_1000239216 337
251 3300053136 Ga0500559_0046937 Ga0500559_0046937_551_1666 337
252 3300009147 Ga0114129_10018358 Ga0114129_100183589 338
253 3300046616 Ga0495668_0001026 Ga0495668_0001026_12977_14083 338
254 3300049703 Ga0501219_000615 Ga0501219_000615_2460_3572 338
255 3300049766 Ga0501269_002813 Ga0501269_002813_638_1744 338
256 3300050005 Ga0501284_00002 Ga0501284_00002_77653_78765 338
257 3300050507 nmdc:mga05p37_13430_c1 nmdc:mga05p37_13430_c1_3939_5024 338
258 3300053153 Ga0500616_0027538 Ga0500616_0027538_1992_3098 338
259 3300045049 Ga0466959_0034955 Ga0466959_0034955_1088_2179 340
260 3300049823 Ga0501044_0080249 Ga0501044_0080249_757_1821 340
261 3300001990 JGI24737J22298_10040536 JGI24737J22298_100405362 341
262 3300003215 JGI25153J46596_10008533 JGI25153J46596_100085333 341
263 3300003354 JGI25160J50197_1003837 JGI25160J50197_10038375 341
264 3300003771 Ga0055526_1009766 Ga0055526_10097662 341
265 3300003790 Ga0055528_1000327 Ga0055528_100032729 341
266 3300003791 Ga0055530_10000102 Ga0055530_100001022 341
267 3300003794 Ga0055531_10012521 Ga0055531_100125212 341
268 3300005262 Ga0065165_1000027 Ga0065165_100002741 341
269 3300006195 Ga0075366_10096064 Ga0075366_100960642 341
270 3300013102 Ga0157371_10062218 Ga0157371_100622182 341
271 3300025273 Ga0209673_1000078 Ga0209673_1000078142 341
272 3300025273 Ga0209673_1022056 Ga0209673_10220562 341
273 3300025295 Ga0209564_1002050 Ga0209564_100205013 341
274 3300025295 Ga0209564_1005553 Ga0209564_10055532 341
275 3300025297 Ga0209758_1004649 Ga0209758_10046498 341
276 3300025297 Ga0209758_1007703 Ga0209758_10077031 341
277 3300025298 Ga0209050_1000097 Ga0209050_1000097156 341
278 3300025302 Ga0207426_1008957 Ga0207426_10089571 341
279 3300025302 Ga0207426_1013658 Ga0207426_10136582 341
280 3300025304 Ga0209257_1001349 Ga0209257_10013497 341
281 3300050493 nmdc:mga0k408_72449_c1 nmdc:mga0k408_72449_c1_442_1509 341

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02628

COX15-CtaA

Cytochrome oxidase assembly protein

42

370

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
8aw5-assembly1.cif.gz_A cryo-em structure of heme a synthase trimer from aquifex aeolicus 0.6721 13 328
8aw5-assembly1.cif.gz_A cryo-em structure of heme a synthase trimer from aquifex aeolicus 0.6421 13 328
6ied-assembly1.cif.gz_A crystal structure of heme a synthase from bacillus subtilis 0.6101 16 331
6ied-assembly1.cif.gz_A crystal structure of heme a synthase from bacillus subtilis 0.5701 16 331
8b4o-assembly1.cif.gz_B cryo-em structure of cytochrome bd oxidase from c. glutamicum 0.3491 14 340
ID Description Score Start End Superfamily
af_Q8VGV1_29_319_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3396 125 340 1.20.1070.10
af_E9PUN7_22_314_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3395 122 340 1.20.1070.10
af_Q9Y5P1_18_311_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3121 126 338 1.20.1070.10
af_P0AF43_330_533_1.20.58.220 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphate transport system protein phou homolog 2; domain 2 0.3056 15 326 1.20.58.220
af_P0AF43_330_533_1.20.58.220 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphate transport system protein phou homolog 2; domain 2 0.3004 15 326 1.20.58.220
ID Description Score Start End GO Terms
AF-A0A7Y4YB68-F1-model_v4 Heme A synthase 0.9462 5 328 GO:0006784
GO:0016020
GO:0016653
GO:0046872
AF-A0A2D4FU98-F1-model_v4 Cytochrome c oxidase assembly protein COX15 homolog 0.9391 6 185 GO:0005743
GO:0006784
GO:0016653
GO:0046872
AF-A0A2P4S548-F1-model_v4 Cytochrome c oxidase assembly protein COX15 homolog 0.9367 12 185 GO:0005743
GO:0006784
GO:0016653
GO:0046872
AF-A0A1D2TJ64-F1-model_v4 Cytochrome C oxidase assembly protein 0.9357 4 332 GO:0006784
GO:0016020
GO:0016653
GO:0046872
AF-A0A257KCK4-F1-model_v4 Heme A synthase (HAS) (EC 1.17.99.9) (Cytochrome aa3-controlling protein) 0.9355 10 332 GO:0005886
GO:0006784
GO:0016653
GO:0046872

Feature Viewer

pLDDT pTM Quality
84.43 0.86 High
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Predicted Structure (AlphaFold2)

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