F384346

General Info

Members Datasets Scaffolds Average Seq Length
281 214 562 539

Family's Representative Sequence

Representative Sequence 3300025944|Ga0207661_10034784|Ga0207661_100347842
Length 591
Sequence MVPRPGVRAAASGRECRWASWAFRGSGGRVRAAQYAQRVTPEQLRDAIRTAVASVVGRGELPVEVPDEIVVERPKNPEHGDYATNVALRLAKPAGRPPRAVADLLAAELRGQPGIAKVDVAGPGFLNITAAQGALGQIAVQAFAAGETFGHTDALAGQKLNLEFVSANPTGPVHIGGTRWAAVGDALGRLLSASGAEVTREYYFNDAGAQIDRFARSLQAAAQGRPVPVDGYAGAYIDDIAARILAEEPGLLDRADDEQVRVLRARGVDLMWDEIKTSLAEFGVVFDVYFSERTLHETGALEKAVARLREKGHVYEADGAVWLRTTHFGDDKDRVLVKSDGEPTYFAADCAYYLNKRERGFDKVVIMLGADHTGYVGRYKALVAAMGDDPDVNLEILIGQLVNLLRDGEPVRMSKRAGTVVNLEDLVEAIGADAARYALARTSIDQTIDLDLDLWSRRTNDNPVFYVQYAHARISSVLRHAADLGISLGDPGDVDAAQLAHPREGDLLRAIGDFPRVLSAAAELRAPHRVARYLEELAGTYHRFYDNCRVLPRGDEETTPRGLARLTLCAATAVVLRNGLGVLGVSAPERM

Samples

Sample ID Description Type Environment
1 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
105 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
106 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
107 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
110 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
113 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
114 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
115 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
116 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
117 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
118 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
119 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
120 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
121 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
122 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
129 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
130 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
135 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
136 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
159 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
170 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
171 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
172 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
173 2501939600 Micromonospora sp. L5 Isolate Unclassified
174 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
175 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
176 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
177 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
178 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
179 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
180 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
181 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
182 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
183 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
184 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
185 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
186 2855683550 Micromonospora sp. RP3T Isolate Unclassified
187 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
188 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
189 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
190 2858868258 Micromonospora sp. MH33 Isolate Unclassified
191 2858882152 Micromonospora noduli MED15 Isolate Nodule
192 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
193 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
194 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
195 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
196 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
197 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
198 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
199 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
200 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
201 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
202 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
203 2902582711 Micromonospora sp. AP08 Isolate Unclassified
204 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
205 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
206 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
207 649633069 Micromonospora sp. L5 Isolate Unclassified
208 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
209 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
210 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
211 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
212 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
213 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
214 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.7
Metatranscriptomes 0.36
Isolates 14.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.71
Nodule 1.78
Rhizoplane 8.9
Rhizosphere 74.38
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207661_10034784 3300025944 Bacteria 3922
2 Ga0055540_1000052 3300003792 Bacteria 143472
3 Ga0070658_10136033 3300005327 Bacteria 2051
4 Ga0070670_100026300 3300005331 Bacteria 5009
5 Ga0068869_100007012 3300005334 Bacteria 7176
6 Ga0070680_100009149 3300005336 Bacteria 7597
7 Ga0070682_100000045 3300005337 Bacteria 131960
8 Ga0068868_100006357 3300005338 Bacteria 8357
9 Ga0070660_100039105 3300005339 Bacteria 3604
10 Ga0070691_10003951 3300005341 Bacteria 6705
11 Ga0070661_100013281 3300005344 Bacteria 5780
12 Ga0070671_100010743 3300005355 Bacteria 7348
13 Ga0070709_10004375 3300005434 Bacteria 7615
14 Ga0070709_10021755 3300005434 Bacteria 3741
15 Ga0070714_100043026 3300005435 Bacteria 3818
16 Ga0070714_100075955 3300005435 Bacteria 2916
17 Ga0070713_100005027 3300005436 Bacteria 8988
18 Ga0070713_100038551 3300005436 Bacteria 3873
19 Ga0070710_10002101 3300005437 Bacteria 9449
20 Ga0070711_100031819 3300005439 Bacteria 3505
21 Ga0070700_100011599 3300005441 Bacteria 4885
22 Ga0070663_100004479 3300005455 Bacteria 8221
23 Ga0070663_100004925 3300005455 Bacteria 7884
24 Ga0070706_100009384 3300005467 Bacteria 9111
25 Ga0070706_100033614 3300005467 Bacteria 4734
26 Ga0070707_100075955 3300005468 Bacteria 3241
27 Ga0070707_100099982 3300005468 Bacteria 2810
28 Ga0070698_100014078 3300005471 Bacteria 8457
29 Ga0070699_100019530 3300005518 Bacteria 5837
30 Ga0070679_100034435 3300005530 Bacteria 5019
31 Ga0070693_100002735 3300005547 Bacteria 8122
32 Ga0070665_100025063 3300005548 Bacteria 6011
33 Ga0068857_100089466 3300005577 Bacteria 2755
34 Ga0068857_100096085 3300005577 Bacteria 2655
35 Ga0068854_100000136 3300005578 Bacteria 51080
36 Ga0068856_100013543 3300005614 Bacteria 7894
37 Ga0070702_100002628 3300005615 Bacteria 7826
38 Ga0068859_100029852 3300005617 Bacteria 5470
39 Ga0068864_100014562 3300005618 Bacteria 6535
40 Ga0068851_10031409 3300005834 Bacteria 2638
41 Ga0068863_100006089 3300005841 Bacteria 11833
42 Ga0068863_100046399 3300005841 Bacteria 4123
43 Ga0068858_100028364 3300005842 Bacteria 5201
44 Ga0081455_10000702 3300005937 Bacteria 43495
45 Ga0081540_1022208 3300005983 Bacteria 3749
46 Ga0081539_10000436 3300005985 Bacteria 88853
47 Ga0081539_10000529 3300005985 Bacteria 79493
48 Ga0081539_10000632 3300005985 Bacteria 71274
49 Ga0081539_10010762 3300005985 Bacteria 7366
50 Ga0070717_10005050 3300006028 Bacteria 9615
51 Ga0070717_10012626 3300006028 Bacteria 6444
52 Ga0070716_100002511 3300006173 Bacteria 8494
53 Ga0070712_100007348 3300006175 Bacteria 6875
54 Ga0068871_100008344 3300006358 Bacteria 7449
55 Ga0075428_100000029 3300006844 Bacteria 119687
56 Ga0075428_100015201 3300006844 Bacteria 8538
57 Ga0075430_100047390 3300006846 Bacteria 3629
58 Ga0075430_100083276 3300006846 Bacteria 2680
59 Ga0075431_100088667 3300006847 Bacteria 3193
60 Ga0075431_100167362 3300006847 Bacteria 2259
61 Ga0075431_100199042 3300006847 Bacteria 2050
62 Ga0075433_10011693 3300006852 Bacteria 7068
63 Ga0075434_100036856 3300006871 Bacteria 4838
64 Ga0075429_100039477 3300006880 Bacteria 4108
65 Ga0075436_100008349 3300006914 Bacteria 7083
66 Ga0097620_100029852 3300006931 Bacteria 5470
67 Ga0105240_10129605 3300009093 Bacteria 3027
68 Ga0111539_10176686 3300009094 Bacteria 2494
69 Ga0105245_10001844 3300009098 Bacteria 19294
70 Ga0105245_10067866 3300009098 Bacteria 3230
71 Ga0105245_10096154 3300009098 Bacteria 2733
72 Ga0105247_10034575 3300009101 Bacteria 3078
73 Ga0114129_10010240 3300009147 Bacteria 13376
74 Ga0105241_10002917 3300009174 Bacteria 12770
75 Ga0105248_10065524 3300009177 Bacteria 4078
76 Ga0105248_10123771 3300009177 Bacteria 2917
77 Ga0105238_10192345 3300009551 Bacteria 2016
78 Ga0105249_10016055 3300009553 Bacteria 6636
79 Ga0105239_10058675 3300010375 Bacteria 4223
80 Ga0105246_10003060 3300011119 Bacteria 10149
81 Ga0157374_10039968 3300013296 Bacteria 4319
82 Ga0163162_10263816 3300013306 Bacteria 1854
83 Ga0163163_10035155 3300014325 Bacteria 4859
84 Ga0163163_10070083 3300014325 Bacteria 3491
85 Ga0157379_10069728 3300014968 Bacteria 3145
86 Ga0213875_10016573 3300021388 Bacteria 3571
87 Ga0224712_10013744 3300022467 Bacteria 2587
88 Ga0207692_10002402 3300025898 Bacteria 7185
89 Ga0207688_10001302 3300025901 Bacteria 12947
90 Ga0207647_10069545 3300025904 Bacteria 2128
91 Ga0207699_10001170 3300025906 Bacteria 12396
92 Ga0207699_10030029 3300025906 Bacteria 3038
93 Ga0207705_10020869 3300025909 Bacteria 4676
94 Ga0207684_10111589 3300025910 Bacteria 2340
95 Ga0207684_10169660 3300025910 Bacteria 1881
96 Ga0207695_10226111 3300025913 Bacteria 1777
97 Ga0207693_10015865 3300025915 Bacteria 6033
98 Ga0207663_10014128 3300025916 Bacteria 4364
99 Ga0207663_10086872 3300025916 Bacteria 2064
100 Ga0207660_10008466 3300025917 Bacteria 6655
101 Ga0207649_10013480 3300025920 Bacteria 4564
102 Ga0207652_10015985 3300025921 Bacteria 6118
103 Ga0207646_10087178 3300025922 Bacteria 2793
104 Ga0207650_10003847 3300025925 Bacteria 10260
105 Ga0207659_10008973 3300025926 Bacteria 6234
106 Ga0207687_10000985 3300025927 Bacteria 19335
107 Ga0207687_10031065 3300025927 Bacteria 3608
108 Ga0207700_10004355 3300025928 Bacteria 8334
109 Ga0207700_10022469 3300025928 Bacteria 4331
110 Ga0207700_10113054 3300025928 Bacteria 2189
111 Ga0207664_10007501 3300025929 Bacteria 7566
112 Ga0207664_10059202 3300025929 Bacteria 3049
113 Ga0207644_10025561 3300025931 Bacteria 4060
114 Ga0207665_10006766 3300025939 Bacteria 7594
115 Ga0207689_10000654 3300025942 Bacteria 33042
116 Ga0207679_10098119 3300025945 Bacteria 2284
117 Ga0207667_10186556 3300025949 Bacteria 2129
118 Ga0207668_10040940 3300025972 Bacteria 3129
119 Ga0207677_10049400 3300026023 Bacteria 2838
120 Ga0207678_10004161 3300026067 Bacteria 12988
121 Ga0207702_10014902 3300026078 Bacteria 6447
122 Ga0207702_10019812 3300026078 Bacteria 5571
123 Ga0207641_10006933 3300026088 Bacteria 9481
124 Ga0207641_10073183 3300026088 Bacteria 2953
125 Ga0207648_10138503 3300026089 Bacteria 2144
126 Ga0207676_10015252 3300026095 Bacteria 5541
127 Ga0207674_10020121 3300026116 Bacteria 7218
128 Ga0207683_10006141 3300026121 Bacteria 10293
129 Ga0207698_10016528 3300026142 Bacteria 4977
130 Ga0207428_10028274 3300027907 Bacteria 4660
131 Ga0307517_10109752 3300028786 Bacteria 2108
132 Ga0307515_10000045 3300028794 Bacteria 301029
133 Ga0307515_10000065 3300028794 Bacteria 244497
134 Ga0307515_10013759 3300028794 Bacteria 15078
135 Ga0265338_10015569 3300028800 Bacteria 8335
136 Ga0307512_10036870 3300030522 Bacteria 4140
137 Ga0265325_10001226 3300031241 Bacteria 18278
138 Ga0265340_10003796 3300031247 Bacteria 8513
139 Ga0307513_10016733 3300031456 Bacteria 8826
140 Ga0307513_10056047 3300031456 Bacteria 4212
141 Ga0307508_10000498 3300031616 Bacteria 47177
142 Ga0307516_10005758 3300031730 Bacteria 14682
143 Ga0307405_10005977 3300031731 Bacteria 5940
144 Ga0307410_10026140 3300031852 Bacteria 3671
145 Ga0307410_10034679 3300031852 Bacteria 3271
146 Ga0307410_10115036 3300031852 Bacteria 1952
147 Ga0326468_10000798 3300031889 Bacteria 3169
148 Ga0307407_10007409 3300031903 Bacteria 4969
149 Ga0307409_100003090 3300031995 Bacteria 8914
150 Ga0307416_100007304 3300032002 Bacteria 7009
151 Ga0307416_100010186 3300032002 Bacteria 6198
152 Ga0307416_100044171 3300032002 Bacteria 3496
153 Ga0307416_100136848 3300032002 Bacteria 2218
154 Ga0307415_100049923 3300032126 Bacteria 2832
155 Ga0307507_10041183 3300033179 Bacteria 4627
156 Ga0373950_0003451 3300034818 Bacteria 2255
157 Ga0373938_0006972 3300034957 Bacteria 1974
158 Ga0373951_0000011 3300035091 Bacteria 76225
159 Ga0373962_0005157 3300035242 Bacteria 3157
160 Ga0373935_0010854 3300035692 Bacteria 5472
161 Ga0395898_0028817 3300037466 Bacteria 5565
162 Ga0436364_1295464 3300037853 Bacteria 23715
163 Ga0395901_0005735 3300038443 Bacteria 12574
164 Ga0436365_0584976 3300039437 Bacteria 2534
165 Ga0439465_0013244 3300041413 Bacteria 2575
166 Ga0451839_0053190 3300041496 Bacteria 4952
167 Ga0451853_1471924 3300041512 Bacteria 3829
168 Ga0466966_0008056 3300044684 Bacteria 6983
169 Ga0466966_0051401 3300044684 Bacteria 2619
170 Ga0466966_0051646 3300044684 Bacteria 2613
171 Ga0466961_0065993 3300044693 Bacteria 2299
172 Ga0466961_0096856 3300044693 Bacteria 1860
173 Ga0466963_0059192 3300044694 Bacteria 2556
174 Ga0466971_0019477 3300044719 Bacteria 3014
175 Ga0466970_0010163 3300044765 Bacteria 4770
176 Ga0466960_0014392 3300044901 Bacteria 3385
177 Ga0466960_0025814 3300044901 Bacteria 2662
178 Ga0466959_0070846 3300045049 Bacteria 2525
179 Ga0466959_0071432 3300045049 Bacteria 2513
180 Ga0466967_0000009 3300045976 Bacteria 122610
181 Ga0466967_0002758 3300045976 Bacteria 11111
182 Ga0466967_0003006 3300045976 Bacteria 10809
183 Ga0466967_0018429 3300045976 Bacteria 5578
184 Ga0495606_0001405 3300046507 Bacteria 32375
185 Ga0495668_0000409 3300046616 Bacteria 56022
186 Ga0495625_0001711 3300046660 Bacteria 25519
187 Ga0495626_0000029 3300048091 Bacteria 202868
188 Ga0496102_0140413 3300048905 Bacteria 2265
189 Ga0496102_0199403 3300048905 Bacteria 1886
190 Ga0496104_0018750 3300048907 Bacteria 6318
191 Ga0496104_0023994 3300048907 Bacteria 5611
192 Ga0496104_0058982 3300048907 Bacteria 3633
193 Ga0496105_0008924 3300048908 Bacteria 7817
194 Ga0496105_0039536 3300048908 Bacteria 3888
195 Ga0496105_0046904 3300048908 Bacteria 3566
196 Ga0496106_0026066 3300048909 Bacteria 4350
197 Ga0496108_0000010 3300048911 Bacteria 273269
198 Ga0496108_0001723 3300048911 Bacteria 17358
199 Ga0496108_0009198 3300048911 Bacteria 7995
200 Ga0496108_0015689 3300048911 Bacteria 6179
201 Ga0496109_0029844 3300048912 Bacteria 4886
202 Ga0496109_0077811 3300048912 Bacteria 3053
203 Ga0496109_0148017 3300048912 Bacteria 2197
204 Ga0496111_0022662 3300048914 Bacteria 4399
205 Ga0496111_0061904 3300048914 Bacteria 2713
206 Ga0496112_0028595 3300048915 Bacteria 5382
207 Ga0496112_0033557 3300048915 Bacteria 4990
208 Ga0496112_0043980 3300048915 Bacteria 4373
209 Ga0496113_0012863 3300048916 Bacteria 5643
210 Ga0496114_0001327 3300048917 Bacteria 18756
211 Ga0496114_0016657 3300048917 Bacteria 5927
212 Ga0496114_0060446 3300048917 Bacteria 3167
213 Ga0496126_0047283 3300048929 Bacteria 3940
214 Ga0501031_0076483 3300049568 Bacteria 2180
215 Ga0501039_0026205 3300049575 Bacteria 4481
216 Ga0501039_0029658 3300049575 Bacteria 4213
217 Ga0501046_0017063 3300049580 Bacteria 6069
218 Ga0501047_0049960 3300049581 Bacteria 4038
219 Ga0501075_0054362 3300049591 Bacteria 3012
220 Ga0501076_0032447 3300049592 Bacteria 4076
221 Ga0501080_0012332 3300049742 Bacteria 7833
222 nmdc:mga05p37_20697_c1 3300050507 Bacteria 7960
223 nmdc:mga05p37_76739_c1 3300050507 Bacteria 4113
224 nmdc:mga09592_588_c1 3300050508 Bacteria 27546
225 nmdc:mga0qj67_150498_c1 3300050509 Bacteria 1888
226 nmdc:mga0qj67_1553_c1 3300050509 Bacteria 16118
227 nmdc:mga06r32_113915_c1 3300050510 Bacteria 2662
228 nmdc:mga06r32_126241_c1 3300050510 Bacteria 2527
229 nmdc:mga06r32_220_c8 3300050510 Bacteria 5537
230 nmdc:mga06r32_43_c1 3300050510 Bacteria 77236
231 nmdc:mga06r32_57816_c1 3300050510 Bacteria 3726
232 nmdc:mga08y16_15782_c1 3300050511 Bacteria 7942
233 nmdc:mga0n895_40460_c1 3300050512 Bacteria 4528
234 nmdc:mga0rr50_6949_c1 3300050513 Bacteria 6939
235 nmdc:mga0a205_79494_c1 3300050515 Bacteria 3169
236 Ga0500646_0003526 3300053090 Bacteria 4012
237 Ga0501084_0081727 3300054114 Bacteria 2711
238 Ga0501082_0040597 3300060353 Bacteria 4013
239 Ga0530510_0050666 3300061734 Bacteria 2999
240 2501939820 2501939600 Bacteria 6907073
241 2515496239 2515154088 Bacteria 5526283
242 2515718574 2515154129 Bacteria 5584369
243 2515756583 2515154137 Bacteria 5711575
244 2516082762 2515154202 Bacteria 5471270
245 2516089190 2515154203 Bacteria 5458536
246 2623501692 2622736605 Bacteria 4992138
247 2676480978 2675903059 Bacteria 8644972
248 2753264939 2751185782 Bacteria 11227053
249 2772643217 2772190715 Bacteria 6959372
250 2799185350 2799112218 Bacteria 4315149
251 2855670662 2855670206 Bacteria 7120389
252 2855679303 2855676851 Bacteria 7063653
253 2855683995 2855683550 Bacteria 7134265
254 2856858524 2856858025 Bacteria 7255264
255 2857291189 2857288857 Bacteria 7189066
256 2858854164 2858848962 Bacteria 6963058
257 2858875689 2858868258 Bacteria 7683772
258 2858887144 2858882152 Bacteria 7230291
259 2858893493 2858888857 Bacteria 7060307
260 2858897890 2858895516 Bacteria 7378898
261 2867306914 2867302475 Bacteria 7087181
262 2867316803 2867312974 Bacteria 7058875
263 2867321995 2867319477 Bacteria 7069771
264 2869053803 2869048445 Bacteria 6875584
265 2869068464 2869061728 Bacteria 7112407
266 2869069510 2869068681 Bacteria 7205615
267 2880495615 2880489317 Bacteria 7096270
268 2880496736 2880495981 Bacteria 7340502
269 2887483053 2887478801 Bacteria 8972725
270 2902583933 2902582711 Bacteria 6187705
271 2929225366 2929219909 Bacteria 6984360
272 2929231659 2929226422 Bacteria 7248583
273 2996224054 2996221748 Bacteria 6799777
274 649813316 649633069 Bacteria 6962533
275 8001782143 8001781756 Bacteria 9586736
276 8003831887 8003830390 Bacteria 6541657
277 8003860361 8003856774 Bacteria 7675274
278 8003874059 8003870546 Bacteria 7396674
279 8054708341 8054704163 Bacteria 7247792
280 8054740086 8054734606 Bacteria 6947278
281 8055414128 8055412473 Bacteria 6257500
282 Ga0207661_10034784
283 Ga0055540_1000052
284 Ga0070658_10136033
285 Ga0070670_100026300
286 Ga0068869_100007012
287 Ga0070680_100009149
288 Ga0070682_100000045
289 Ga0068868_100006357
290 Ga0070660_100039105
291 Ga0070691_10003951
292 Ga0070661_100013281
293 Ga0070671_100010743
294 Ga0070709_10004375
295 Ga0070709_10021755
296 Ga0070714_100043026
297 Ga0070714_100075955
298 Ga0070713_100005027
299 Ga0070713_100038551
300 Ga0070710_10002101
301 Ga0070711_100031819
302 Ga0070700_100011599
303 Ga0070663_100004479
304 Ga0070663_100004925
305 Ga0070706_100009384
306 Ga0070706_100033614
307 Ga0070707_100075955
308 Ga0070707_100099982
309 Ga0070698_100014078
310 Ga0070699_100019530
311 Ga0070679_100034435
312 Ga0070693_100002735
313 Ga0070665_100025063
314 Ga0068857_100089466
315 Ga0068857_100096085
316 Ga0068854_100000136
317 Ga0068856_100013543
318 Ga0070702_100002628
319 Ga0068859_100029852
320 Ga0068864_100014562
321 Ga0068851_10031409
322 Ga0068863_100006089
323 Ga0068863_100046399
324 Ga0068858_100028364
325 Ga0081455_10000702
326 Ga0081540_1022208
327 Ga0081539_10000436
328 Ga0081539_10000529
329 Ga0081539_10000632
330 Ga0081539_10010762
331 Ga0070717_10005050
332 Ga0070717_10012626
333 Ga0070716_100002511
334 Ga0070712_100007348
335 Ga0068871_100008344
336 Ga0075428_100000029
337 Ga0075428_100015201
338 Ga0075430_100047390
339 Ga0075430_100083276
340 Ga0075431_100088667
341 Ga0075431_100167362
342 Ga0075431_100199042
343 Ga0075433_10011693
344 Ga0075434_100036856
345 Ga0075429_100039477
346 Ga0075436_100008349
347 Ga0097620_100029852
348 Ga0105240_10129605
349 Ga0111539_10176686
350 Ga0105245_10001844
351 Ga0105245_10067866
352 Ga0105245_10096154
353 Ga0105247_10034575
354 Ga0114129_10010240
355 Ga0105241_10002917
356 Ga0105248_10065524
357 Ga0105248_10123771
358 Ga0105238_10192345
359 Ga0105249_10016055
360 Ga0105239_10058675
361 Ga0105246_10003060
362 Ga0157374_10039968
363 Ga0163162_10263816
364 Ga0163163_10035155
365 Ga0163163_10070083
366 Ga0157379_10069728
367 Ga0213875_10016573
368 Ga0224712_10013744
369 Ga0207692_10002402
370 Ga0207688_10001302
371 Ga0207647_10069545
372 Ga0207699_10001170
373 Ga0207699_10030029
374 Ga0207705_10020869
375 Ga0207684_10111589
376 Ga0207684_10169660
377 Ga0207695_10226111
378 Ga0207693_10015865
379 Ga0207663_10014128
380 Ga0207663_10086872
381 Ga0207660_10008466
382 Ga0207649_10013480
383 Ga0207652_10015985
384 Ga0207646_10087178
385 Ga0207650_10003847
386 Ga0207659_10008973
387 Ga0207687_10000985
388 Ga0207687_10031065
389 Ga0207700_10004355
390 Ga0207700_10022469
391 Ga0207700_10113054
392 Ga0207664_10007501
393 Ga0207664_10059202
394 Ga0207644_10025561
395 Ga0207665_10006766
396 Ga0207689_10000654
397 Ga0207679_10098119
398 Ga0207667_10186556
399 Ga0207668_10040940
400 Ga0207677_10049400
401 Ga0207678_10004161
402 Ga0207702_10014902
403 Ga0207702_10019812
404 Ga0207641_10006933
405 Ga0207641_10073183
406 Ga0207648_10138503
407 Ga0207676_10015252
408 Ga0207674_10020121
409 Ga0207683_10006141
410 Ga0207698_10016528
411 Ga0207428_10028274
412 Ga0307517_10109752
413 Ga0307515_10000045
414 Ga0307515_10000065
415 Ga0307515_10013759
416 Ga0265338_10015569
417 Ga0307512_10036870
418 Ga0265325_10001226
419 Ga0265340_10003796
420 Ga0307513_10016733
421 Ga0307513_10056047
422 Ga0307508_10000498
423 Ga0307516_10005758
424 Ga0307405_10005977
425 Ga0307410_10026140
426 Ga0307410_10034679
427 Ga0307410_10115036
428 Ga0326468_10000798
429 Ga0307407_10007409
430 Ga0307409_100003090
431 Ga0307416_100007304
432 Ga0307416_100010186
433 Ga0307416_100044171
434 Ga0307416_100136848
435 Ga0307415_100049923
436 Ga0307507_10041183
437 Ga0373950_0003451
438 Ga0373938_0006972
439 Ga0373951_0000011
440 Ga0373962_0005157
441 Ga0373935_0010854
442 Ga0395898_0028817
443 Ga0436364_1295464
444 Ga0395901_0005735
445 Ga0436365_0584976
446 Ga0439465_0013244
447 Ga0451839_0053190
448 Ga0451853_1471924
449 Ga0466966_0008056
450 Ga0466966_0051401
451 Ga0466966_0051646
452 Ga0466961_0065993
453 Ga0466961_0096856
454 Ga0466963_0059192
455 Ga0466971_0019477
456 Ga0466970_0010163
457 Ga0466960_0014392
458 Ga0466960_0025814
459 Ga0466959_0070846
460 Ga0466959_0071432
461 Ga0466967_0000009
462 Ga0466967_0002758
463 Ga0466967_0003006
464 Ga0466967_0018429
465 Ga0495606_0001405
466 Ga0495668_0000409
467 Ga0495625_0001711
468 Ga0495626_0000029
469 Ga0496102_0140413
470 Ga0496102_0199403
471 Ga0496104_0018750
472 Ga0496104_0023994
473 Ga0496104_0058982
474 Ga0496105_0008924
475 Ga0496105_0039536
476 Ga0496105_0046904
477 Ga0496106_0026066
478 Ga0496108_0000010
479 Ga0496108_0001723
480 Ga0496108_0009198
481 Ga0496108_0015689
482 Ga0496109_0029844
483 Ga0496109_0077811
484 Ga0496109_0148017
485 Ga0496111_0022662
486 Ga0496111_0061904
487 Ga0496112_0028595
488 Ga0496112_0033557
489 Ga0496112_0043980
490 Ga0496113_0012863
491 Ga0496114_0001327
492 Ga0496114_0016657
493 Ga0496114_0060446
494 Ga0496126_0047283
495 Ga0501031_0076483
496 Ga0501039_0026205
497 Ga0501039_0029658
498 Ga0501046_0017063
499 Ga0501047_0049960
500 Ga0501075_0054362
501 Ga0501076_0032447
502 Ga0501080_0012332
503 nmdc:mga05p37_20697_c1
504 nmdc:mga05p37_76739_c1
505 nmdc:mga09592_588_c1
506 nmdc:mga0qj67_150498_c1
507 nmdc:mga0qj67_1553_c1
508 nmdc:mga06r32_113915_c1
509 nmdc:mga06r32_126241_c1
510 nmdc:mga06r32_220_c8
511 nmdc:mga06r32_43_c1
512 nmdc:mga06r32_57816_c1
513 nmdc:mga08y16_15782_c1
514 nmdc:mga0n895_40460_c1
515 nmdc:mga0rr50_6949_c1
516 nmdc:mga0a205_79494_c1
517 Ga0500646_0003526
518 Ga0501084_0081727
519 Ga0501082_0040597
520 Ga0530510_0050666
521 2501939820
522 2515496239
523 2515718574
524 2515756583
525 2516082762
526 2516089190
527 2623501692
528 2676480978
529 2753264939
530 2772643217
531 2799185350
532 2855670662
533 2855679303
534 2855683995
535 2856858524
536 2857291189
537 2858854164
538 2858875689
539 2858887144
540 2858893493
541 2858897890
542 2867306914
543 2867316803
544 2867321995
545 2869053803
546 2869068464
547 2869069510
548 2880495615
549 2880496736
550 2887483053
551 2902583933
552 2929225366
553 2929231659
554 2996224054
555 649813316
556 8001782143
557 8003831887
558 8003860361
559 8003874059
560 8054708341
561 8054740086
562 8055414128

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03485

Arg_tRNA_synt_N

Arginyl tRNA synthetase N terminal domain

42

130

0.93

PF05746

DALR_1

DALR anticodon binding domain

467

591

0.92

PF00750

tRNA-synt_1d

tRNA synthetases class I (R)

140

448

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3fnr-assembly1.cif.gz_A crystal structure of putative arginyl t-rna synthetase from campylobacter jejuni; 0.9324 93 550
3fnr-assembly1.cif.gz_A crystal structure of putative arginyl t-rna synthetase from campylobacter jejuni; 0.9304 93 550
2zue-assembly1.cif.gz_A crystal structure of pyrococcus horikoshii arginyl-trna synthetase complexed with trna(arg) and an atp analog (anp) 0.7939 12 550
6ao8-assembly1.cif.gz_A crystal structure of arginyl-trna_synthetase from neisseria gonorrhoeae in complex with arginine 0.7895 6 550
5yym-assembly1.cif.gz_A crystal structures of e.coli arginyl-trna synthetase (argrs) in complex with substrate arg 0.7824 7 550
ID Description Score Start End Superfamily
af_P9WFW5_3_109_3.30.1360.70 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Arginyl tRNA synthetase N-terminal domain 0.9895 3 109 3.30.1360.70
af_P9WFW5_3_109_3.30.1360.70 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Arginyl tRNA synthetase N-terminal domain 0.9804 3 109 3.30.1360.70
af_Q3U186_457_578_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9399 428 550 1.10.730.10
af_Q57689_448_566_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9331 430 550 1.10.730.10
3fnrA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9331 119 421 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7X7DD01-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9853 119 550 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-C3PFN8-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) 0.9829 1 550 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A6G3VNE2-F1-model_v4 deleted 0.9824 130 288
AF-C3PFN8-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) 0.9811 1 550 GO:0004814
GO:0005524
GO:0005737
GO:0006420
AF-A0A7X7DD01-F1-model_v4 Arginine--tRNA ligase (EC 6.1.1.19) 0.9808 119 550 GO:0004814
GO:0005524
GO:0005737
GO:0006420

Map