F384646

General Info

Members Datasets Scaffolds Average Seq Length
281 241 562 343

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2920760137|2920766910
Length 407
Sequence PASSDPNRLTGGLDRAASALPSANVHRTSELTNPLVSDTSSSSSWLQTVTEQKMQPFRLIGIGLACAYLAGCEEKAEVTPSPQQVRAVSASQTEYQPAAEITGEVKARIQSDLSFRVSGRVIERFVDVGLHVRAGDVLARLDDKEQRADVELARAGLESAQAIVKQRTLTFDRYEALLRSRSISQATFDQADKELRTARASLEAAEAALATAKDALSYTELKADADGIITAREIEVGRVVSAAQPAFTLAHDGPRDAVFEVFEAFFLEGRPLADVEVAPIADRALETQATVREVSPFIDTSSGTVRIKVALPDDAQWPLGTPVIGEFRSPSRKGIILPAGAIASAMGEPAVWLINPENRSVSLRKIAVASYRKSDLIVAGGIAPQDLIVTEGGKFLKEGQAVAWKGK

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
8 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
9 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
10 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
11 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
12 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
13 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
14 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
18 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
19 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
20 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
21 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
35 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
41 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
42 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
43 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
45 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
46 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
47 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
48 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
50 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
51 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
57 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
60 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
64 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
65 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
66 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
67 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
68 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
69 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
70 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
71 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
72 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
73 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
74 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
75 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
76 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
77 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
78 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
79 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
80 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
81 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
82 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
83 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
84 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
85 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
86 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
87 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
88 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
89 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
90 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
91 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
92 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
93 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
94 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
95 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
96 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
97 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
98 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
99 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
100 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
101 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
102 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
103 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
104 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
105 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
106 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
107 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
108 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
109 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
110 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
111 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
112 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
113 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
114 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
115 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
116 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
117 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
118 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
119 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
120 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
121 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
122 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
123 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
124 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
125 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
126 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
127 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
128 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
129 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
130 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
131 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
132 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
133 2600254931 Pseudomonas sp. NFIX28 Isolate Rhizoplane
134 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
135 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
136 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
137 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
138 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
139 2643221582 Rhizobium sp. Root651 Isolate Unclassified
140 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
141 2643221693 Rhizobium sp. Root491 Isolate Unclassified
142 2643221719 Rhizobium sp. Root274 Isolate Unclassified
143 2643221723 Ensifer sp. Root278 Isolate Unclassified
144 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
145 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
146 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
147 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
148 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
149 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
150 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
151 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
152 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
153 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
154 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
155 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
156 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
157 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
158 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
159 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
160 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
161 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
162 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
163 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
164 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
165 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
166 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
167 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
168 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
169 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
170 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
171 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
172 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
173 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
174 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
175 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
176 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
177 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
178 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
179 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
180 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
181 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
182 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
183 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
184 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
185 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
186 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
187 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
188 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
189 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
190 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
191 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
192 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
193 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
194 2854911287 Brucella lupini LUP21 Isolate Unclassified
195 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
196 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
197 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
198 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
199 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
200 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
201 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
202 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
203 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
204 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
205 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
206 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
207 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
208 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
209 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
210 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
211 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
212 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
213 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
214 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
215 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
216 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
217 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
218 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
219 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
220 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
221 2996887358 Rhizobium sp. R711 Isolate Nodule
222 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
223 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
224 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
225 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
226 641522639 Methylobacterium sp. 4-46 Isolate Nodule
227 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
228 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
229 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
230 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
231 8005258706 Rhizobium sp. R693 Isolate Nodule
232 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
233 8005321885 Rhizobium sp. R72 Isolate Nodule
234 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
235 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
236 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
237 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
238 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
239 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
240 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
241 8054558443 Rhizobium alarense TRM95111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 49.82
Metatranscriptomes 0
Isolates 50.18

Biome Distribution

Category Percentage (%)
Aerial Root 1.42
Bulb 0
Endosphere 22.78
Nodule 25.62
Rhizoplane 3.2
Rhizosphere 19.93
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000044 3300001979 Bacteria 40870
2 JGI25155J39150_1000021 3300002704 Bacteria 150730
3 JGI25156J39149_1000022 3300002705 Bacteria 150730
4 JGI25162J39368_1000004 3300002737 Bacteria 441040
5 JGI25162J39368_1000074 3300002737 Bacteria 121066
6 JGI25154J39366_1000048 3300002738 Bacteria 126252
7 JGI25157J39369_1000025 3300002741 Bacteria 150726
8 JGI25163J39215_1000089 3300002771 Bacteria 38915
9 JGI25164J39214_1000034 3300002772 Bacteria 139998
10 JGI25152J39213_1002868 3300002773 Bacteria 6169
11 JGI25150J39212_1001849 3300002774 Bacteria 5597
12 JGI25150J39212_1006037 3300002774 Bacteria 2539
13 JGI25159J45721_1002372 3300002987 Bacteria 7182
14 JGI25151J46595_10019412 3300003187 Bacteria 2889
15 JGI25165J46597_1000011 3300003214 Bacteria 441040
16 JGI25165J46597_1000201 3300003214 Bacteria 87622
17 JGI25165J46597_1002292 3300003214 Bacteria 6536
18 rootH1_10021286 3300003316 Bacteria 21728
19 rootH2_10001973 3300003320 Bacteria 14634
20 rootH2_10092073 3300003320 Bacteria 4662
21 rootL2_10017635 3300003322 Bacteria 34650
22 JGI25160J50197_1000516 3300003354 Bacteria 22788
23 JGI25161J50226_1000371 3300003374 Bacteria 22788
24 Ga0055524_1005482 3300003775 Bacteria 5657
25 Ga0058692_1000335 3300003856 Bacteria 23347
26 Ga0058692_1001924 3300003856 Bacteria 7247
27 Ga0055543_1000493 3300004625 Bacteria 22826
28 Ga0065165_1001634 3300005262 Bacteria 22826
29 Ga0068856_100002453 3300005614 Bacteria 19080
30 Ga0075368_10004304 3300006042 Bacteria 4814
31 Ga0075363_100000269 3300006048 Bacteria 14977
32 Ga0075364_10013443 3300006051 Bacteria 5033
33 Ga0075364_10045815 3300006051 Bacteria 2846
34 Ga0075362_10000128 3300006177 Bacteria 20952
35 Ga0075367_10013804 3300006178 Bacteria 4357
36 Ga0075367_10014326 3300006178 Bacteria 4291
37 Ga0075369_10008845 3300006186 Bacteria 3890
38 Ga0075366_10002669 3300006195 Bacteria 9196
39 Ga0075370_10047492 3300006353 Bacteria 2431
40 Ga0099826_10000059 3300006948 Bacteria 63493
41 Ga0099826_10021763 3300006948 Bacteria 4802
42 Ga0105243_10011737 3300009148 Bacteria 6624
43 Ga0123341_1014936 3300009765 Bacteria 6936
44 Ga0123342_1020513 3300009766 Bacteria 4815
45 Ga0105246_10058948 3300011119 Bacteria 2662
46 Ga0157373_10006449 3300013100 Bacteria 8763
47 Ga0157371_10000002 3300013102 Bacteria 665040
48 Ga0157370_10001455 3300013104 Bacteria 29311
49 Ga0182007_10005511 3300015262 Bacteria 5549
50 Ga0209435_100033 3300025206 Bacteria 150395
51 Ga0209760_100050 3300025207 Bacteria 106788
52 Ga0207427_100003 3300025231 Bacteria 1035004
53 Ga0209437_100002 3300025233 Bacteria 1574801
54 Ga0209437_100067 3300025233 Bacteria 317685
55 Ga0207425_1000947 3300025245 Bacteria 13768
56 Ga0209646_1000116 3300025246 Bacteria 150395
57 Ga0209646_1002092 3300025246 Bacteria 4674
58 Ga0209026_1000103 3300025250 Bacteria 152843
59 Ga0209677_100327 3300025253 Bacteria 30487
60 Ga0209759_1000105 3300025256 Bacteria 150395
61 Ga0209129_1000485 3300025258 Bacteria 29021
62 Ga0209129_1008203 3300025258 Bacteria 2946
63 Ga0209233_1000004 3300025261 Bacteria 1574798
64 Ga0209233_1000088 3300025261 Bacteria 317980
65 Ga0209233_1000250 3300025261 Bacteria 85129
66 Ga0209673_1002633 3300025273 Bacteria 12038
67 Ga0209130_1000957 3300025284 Bacteria 22840
68 Ga0209025_1000255 3300025294 Bacteria 125764
69 Ga0209025_1003642 3300025294 Bacteria 14304
70 Ga0209025_1008337 3300025294 Bacteria 7471
71 Ga0209256_1002022 3300025299 Bacteria 18074
72 Ga0207426_1001210 3300025302 Bacteria 22840
73 Ga0207702_10004345 3300026078 Bacteria 12637
74 Ga0209371_1000003 3300027312 Bacteria 1122971
75 Ga0209371_1001456 3300027312 Bacteria 16029
76 Ga0209371_1001534 3300027312 Bacteria 15290
77 Ga0209371_1006163 3300027312 Bacteria 4527
78 Ga0209282_1000502 3300027666 Bacteria 19013
79 Ga0209282_1016846 3300027666 Bacteria 4649
80 Ga0209813_10002024 3300027866 Bacteria 4595
81 Ga0268266_10014308 3300028379 Bacteria 6824
82 Ga0307515_10271431 3300028794 Bacteria 1416
83 Ga0268256_1000004 3300030500 Bacteria 1122967
84 Ga0268256_1001237 3300030500 Bacteria 16029
85 Ga0268256_1004414 3300030500 Bacteria 5843
86 Ga0268256_1009031 3300030500 Bacteria 3355
87 Ga0316181_1185167 3300030744 Bacteria 3153
88 Ga0439465_0024513 3300041413 Bacteria 1901
89 Ga0450900_000463 3300042136 Bacteria 3204
90 Ga0495610_0037941 3300046512 Bacteria 2448
91 Ga0495643_0015484 3300046522 Bacteria 4505
92 Ga0495633_0048999 3300046558 Bacteria 1994
93 Ga0495588_0001008 3300046674 Bacteria 12268
94 Ga0495681_0006093 3300047470 Bacteria 7969
95 Ga0495626_0070741 3300048091 Bacteria 1569
96 Ga0496102_0051537 3300048905 Bacteria 3749
97 Ga0496106_0004051 3300048909 Bacteria 10937
98 Ga0496116_0041754 3300048919 Bacteria 3144
99 Ga0496117_0000052 3300048920 Bacteria 280463
100 Ga0496117_0040572 3300048920 Bacteria 3421
101 Ga0496117_0069045 3300048920 Bacteria 2382
102 Ga0496117_0076713 3300048920 Bacteria 2214
103 Ga0496118_0000432 3300048921 Bacteria 69605
104 Ga0496119_0006523 3300048922 Bacteria 10769
105 Ga0496119_0034483 3300048922 Bacteria 3332
106 Ga0496120_0000019 3300048923 Bacteria 260115
107 Ga0496120_0077614 3300048923 Bacteria 1807
108 Ga0496121_0009817 3300048924 Bacteria 10932
109 Ga0496122_0000053 3300048925 Bacteria 260120
110 Ga0496122_0012896 3300048925 Bacteria 8254
111 Ga0496122_0013967 3300048925 Bacteria 7806
112 Ga0496123_0000038 3300048926 Bacteria 260120
113 Ga0496123_0006764 3300048926 Bacteria 11020
114 Ga0496123_0011676 3300048926 Bacteria 7579
115 Ga0496124_0011846 3300048927 Bacteria 8682
116 Ga0496124_0015300 3300048927 Bacteria 7363
117 Ga0496124_0027936 3300048927 Bacteria 5053
118 Ga0496125_0022931 3300048928 Bacteria 5783
119 Ga0496125_0050215 3300048928 Bacteria 3455
120 Ga0496125_0055240 3300048928 Bacteria 3237
121 Ga0496126_0000271 3300048929 Bacteria 110289
122 Ga0496126_0153260 3300048929 Bacteria 1974
123 nmdc:mga03683_132_c1 3300050489 Bacteria 24967
124 nmdc:mga03n38_738_c1 3300050490 Bacteria 8641
125 nmdc:mga00v17_11_c1 3300050491 Bacteria 135478
126 nmdc:mga0yw44_96_c1 3300050492 Bacteria 30976
127 nmdc:mga06z11_16352_c1 3300050494 Bacteria 3339
128 nmdc:mga06z11_86241_c1 3300050494 Bacteria 1696
129 nmdc:mga04h51_34043_c1 3300050495 Bacteria 1626
130 nmdc:mga07m45_21990_c1 3300050496 Bacteria 3480
131 nmdc:mga0sz30_485_c1 3300050516 Bacteria 14930
132 Ga0500651_0036708 3300053093 Bacteria 3088
133 Ga0500560_002851 3300053107 Bacteria 3399
134 Ga0500607_071727 3300053121 Bacteria 1787
135 Ga0500561_0000033 3300053137 Bacteria 28489
136 Ga0500568_0000513 3300053139 Bacteria 28533
137 Ga0500573_0000099 3300053140 Bacteria 37668
138 Ga0500622_0000316 3300053156 Bacteria 48869
139 Ga0500624_000861 3300053157 Bacteria 6698
140 Ga0500634_0000506 3300053161 Bacteria 12676
141 2920766910 2920760137 Bacteria 7427611
142 2511197415 2510917030 Bacteria 7460662
143 2513568892 2513237084 Bacteria 7231967
144 2513870403 2513237138 Bacteria 7368160
145 2513911797 2513237144 Bacteria 7530820
146 2513912061 2513237144 Bacteria 7530820
147 2513929382 2513237146 Bacteria 7166346
148 2514002217 2513237159 Bacteria 6810126
149 2514024627 2513237162 Bacteria 7468464
150 2515637727 2515154113 Bacteria 7807172
151 2515642827 2515154114 Bacteria 7848616
152 2515658656 2515154116 Bacteria 7552979
153 2523467631 2523231067 Bacteria 5230452
154 2537872930 2537561587 Bacteria 5425293
155 2545676424 2545555834 Bacteria 8130841
156 2554245156 2554235003 Bacteria 5877155
157 2559297013 2558860242 Bacteria 5568029
158 2585226680 2582581298 Bacteria 7315509
159 2585280917 2582581308 Bacteria 7413247
160 2585324447 2582581315 Bacteria 7318924
161 2585335581 2582581316 Bacteria 7774528
162 2585397081 2582581866 Bacteria 6859583
163 2585403294 2582581867 Bacteria 7184437
164 2585530621 2585427527 Bacteria 7273426
165 2585550095 2585427529 Bacteria 7395659
166 2585554799 2585427530 Bacteria 7383882
167 2585823821 2585427590 Bacteria 6824633
168 2585824098 2585427590 Bacteria 6824633
169 2585992732 2585427633 Bacteria 6413184
170 2599419375 2599185170 Bacteria 7295545
171 2599605073 2599185210 Bacteria 5624189
172 2600196324 2599185352 Bacteria 7228948
173 2600363010 2600254931 Bacteria 6734225
174 2601611140 2600255279 Bacteria 5605316
175 2601747913 2600255308 Bacteria 5611129
176 2616310700 2615840626 Bacteria 7921970
177 2616555560 2615840698 Bacteria 7319877
178 2617384157 2617270742 Bacteria 6808054
179 2643916879 2643221582 Bacteria 5804683
180 2644300544 2643221653 Bacteria 4569637
181 2644521256 2643221693 Bacteria 5513853
182 2644658885 2643221719 Bacteria 4568197
183 2644677303 2643221723 Bacteria 7095460
184 2671114368 2667528174 Bacteria 6435400
185 2739349096 2738543031 Bacteria 5769731
186 2770195875 2767802442 Bacteria 5747986
187 2776269418 2775506902 Bacteria 6208009
188 2776282348 2775506904 Bacteria 5954060
189 2792750228 2791355123 Bacteria 8049106
190 2793281278 2791355253 Bacteria 5171699
191 2808989026 2808606387 Bacteria 5697198
192 2819243509 2818991272 Bacteria 4622173
193 2819557153 2818991439 Bacteria 6907412
194 2819610209 2818991448 Bacteria 6772224
195 2819641077 2818991453 Bacteria 7181617
196 2838030517 2838029111 Bacteria 6603031
197 2838040092 2838035591 Bacteria 7166484
198 2838663872 2838661181 Bacteria 7385261
199 2838678309 2838675328 Bacteria 4909118
200 2838681071 2838680041 Bacteria 6545511
201 2838694896 2838694306 Bacteria 6853137
202 2838708272 2838707686 Bacteria 6619912
203 2838716785 2838714209 Bacteria 5525906
204 2838722605 2838719591 Bacteria 5523910
205 2838727534 2838724970 Bacteria 4908691
206 2838742487 2838736955 Bacteria 5760694
207 2840767121 2840764183 Bacteria 6358399
208 2841846438 2841840854 Bacteria 5761912
209 2841849140 2841846520 Bacteria 5345850
210 2841861799 2841859092 Bacteria 5436171
211 2842080494 2842077413 Bacteria 6508645
212 2842121113 2842118031 Bacteria 7033875
213 2842128111 2842124991 Bacteria 5346824
214 2842133202 2842130223 Bacteria 4909145
215 2842146166 2842140634 Bacteria 5759631
216 2842155196 2842152218 Bacteria 4908957
217 2842173695 2842170452 Bacteria 5525737
218 2842178817 2842175837 Bacteria 4908771
219 2842189892 2842187318 Bacteria 5524014
220 2842214206 2842211629 Bacteria 5523832
221 2842226925 2842224351 Bacteria 5524473
222 2842237684 2842237096 Bacteria 6620661
223 2842294153 2842291075 Bacteria 7076806
224 2842371534 2842370503 Bacteria 7038661
225 2842380550 2842377471 Bacteria 7140707
226 2842387621 2842384541 Bacteria 7057858
227 2842477202 2842475841 Bacteria 6603183
228 2842503999 2842502639 Bacteria 6604161
229 2842512589 2842509118 Bacteria 6850950
230 2842517935 2842515876 Bacteria 5436280
231 2842525393 2842521101 Bacteria 6569494
232 2852395108 2852387548 Bacteria 8025568
233 2854896802 2854896431 Bacteria 5869725
234 2854915954 2854911287 Bacteria 5582813
235 2882636828 2882632389 Bacteria 8154593
236 2894821735 2894817345 Bacteria 4892941
237 2896387271 2896384573 Bacteria 7700774
238 2899792889 2899792073 Bacteria 4926588
239 2899845386 2899845264 Bacteria 5672268
240 2919107146 2919100787 Bacteria 7710546
241 2919116976 2919114240 Bacteria 5700270
242 2919412302 2919408235 Bacteria 6149349
243 2926758489 2926754445 Bacteria 5964435
244 2926763979 2926760298 Bacteria 5505990
245 2933009425 2933006813 Bacteria 4912075
246 2933013564 2933011516 Bacteria 5439334
247 2933017757 2933016740 Bacteria 6355406
248 2933598183 2933594066 Bacteria 5594265
249 2935895418 2935894831 Bacteria 6620579
250 2936368383 2936367885 Bacteria 7324495
251 2958066558 2958064165 Bacteria 7158582
252 2977528258 2977523885 Bacteria 6960446
253 2979090923 2979089926 Bacteria 5670289
254 2979096448 2979095461 Bacteria 5669583
255 2979102184 2979100975 Bacteria 5423623
256 2984509867 2984509177 Bacteria 5274802
257 2984519436 2984518228 Bacteria 5277463
258 2984538207 2984537506 Bacteria 5277481
259 2984604959 2984601300 Bacteria 5455244
260 2989781099 2989776772 Bacteria 4843317
261 2996893162 2996887358 Bacteria 5795980
262 3003666328 3003665799 Bacteria 7279786
263 3003935528 3003930520 Bacteria 5667563
264 3005416613 3005416602 Bacteria 7064308
265 3005447781 3005445848 Bacteria 6906074
266 641641389 641522639 Bacteria 7737025
267 643598506 643348564 Bacteria 8839022
268 650843439 650716007 Bacteria 5573770
269 8003573034 8003570095 Bacteria 5747666
270 8005251419 8005246636 Bacteria 4933972
271 8005260886 8005258706 Bacteria 6184835
272 8005320744 8005314921 Bacteria 7072929
273 8005327689 8005321885 Bacteria 5795980
274 8005376871 8005376324 Bacteria 6590079
275 8005487652 8005484373 Bacteria 6297373
276 8005570184 8005563573 Bacteria 7153261
277 8005647982 8005645114 Bacteria 6950293
278 8005686057 8005682033 Bacteria 6726518
279 8018150511 8018150411 Bacteria 5549903
280 8046770581 8046767195 Bacteria 7547379
281 8054563389 8054558443 Bacteria 5204801
282 JGI24740J21852_10000044
283 JGI25155J39150_1000021
284 JGI25156J39149_1000022
285 JGI25162J39368_1000004
286 JGI25162J39368_1000074
287 JGI25154J39366_1000048
288 JGI25157J39369_1000025
289 JGI25163J39215_1000089
290 JGI25164J39214_1000034
291 JGI25152J39213_1002868
292 JGI25150J39212_1001849
293 JGI25150J39212_1006037
294 JGI25159J45721_1002372
295 JGI25151J46595_10019412
296 JGI25165J46597_1000011
297 JGI25165J46597_1000201
298 JGI25165J46597_1002292
299 rootH1_10021286
300 rootH2_10001973
301 rootH2_10092073
302 rootL2_10017635
303 JGI25160J50197_1000516
304 JGI25161J50226_1000371
305 Ga0055524_1005482
306 Ga0058692_1000335
307 Ga0058692_1001924
308 Ga0055543_1000493
309 Ga0065165_1001634
310 Ga0068856_100002453
311 Ga0075368_10004304
312 Ga0075363_100000269
313 Ga0075364_10013443
314 Ga0075364_10045815
315 Ga0075362_10000128
316 Ga0075367_10013804
317 Ga0075367_10014326
318 Ga0075369_10008845
319 Ga0075366_10002669
320 Ga0075370_10047492
321 Ga0099826_10000059
322 Ga0099826_10021763
323 Ga0105243_10011737
324 Ga0123341_1014936
325 Ga0123342_1020513
326 Ga0105246_10058948
327 Ga0157373_10006449
328 Ga0157371_10000002
329 Ga0157370_10001455
330 Ga0182007_10005511
331 Ga0209435_100033
332 Ga0209760_100050
333 Ga0207427_100003
334 Ga0209437_100002
335 Ga0209437_100067
336 Ga0207425_1000947
337 Ga0209646_1000116
338 Ga0209646_1002092
339 Ga0209026_1000103
340 Ga0209677_100327
341 Ga0209759_1000105
342 Ga0209129_1000485
343 Ga0209129_1008203
344 Ga0209233_1000004
345 Ga0209233_1000088
346 Ga0209233_1000250
347 Ga0209673_1002633
348 Ga0209130_1000957
349 Ga0209025_1000255
350 Ga0209025_1003642
351 Ga0209025_1008337
352 Ga0209256_1002022
353 Ga0207426_1001210
354 Ga0207702_10004345
355 Ga0209371_1000003
356 Ga0209371_1001456
357 Ga0209371_1001534
358 Ga0209371_1006163
359 Ga0209282_1000502
360 Ga0209282_1016846
361 Ga0209813_10002024
362 Ga0268266_10014308
363 Ga0307515_10271431
364 Ga0268256_1000004
365 Ga0268256_1001237
366 Ga0268256_1004414
367 Ga0268256_1009031
368 Ga0316181_1185167
369 Ga0439465_0024513
370 Ga0450900_000463
371 Ga0495610_0037941
372 Ga0495643_0015484
373 Ga0495633_0048999
374 Ga0495588_0001008
375 Ga0495681_0006093
376 Ga0495626_0070741
377 Ga0496102_0051537
378 Ga0496106_0004051
379 Ga0496116_0041754
380 Ga0496117_0000052
381 Ga0496117_0040572
382 Ga0496117_0069045
383 Ga0496117_0076713
384 Ga0496118_0000432
385 Ga0496119_0006523
386 Ga0496119_0034483
387 Ga0496120_0000019
388 Ga0496120_0077614
389 Ga0496121_0009817
390 Ga0496122_0000053
391 Ga0496122_0012896
392 Ga0496122_0013967
393 Ga0496123_0000038
394 Ga0496123_0006764
395 Ga0496123_0011676
396 Ga0496124_0011846
397 Ga0496124_0015300
398 Ga0496124_0027936
399 Ga0496125_0022931
400 Ga0496125_0050215
401 Ga0496125_0055240
402 Ga0496126_0000271
403 Ga0496126_0153260
404 nmdc:mga03683_132_c1
405 nmdc:mga03n38_738_c1
406 nmdc:mga00v17_11_c1
407 nmdc:mga0yw44_96_c1
408 nmdc:mga06z11_16352_c1
409 nmdc:mga06z11_86241_c1
410 nmdc:mga04h51_34043_c1
411 nmdc:mga07m45_21990_c1
412 nmdc:mga0sz30_485_c1
413 Ga0500651_0036708
414 Ga0500560_002851
415 Ga0500607_071727
416 Ga0500561_0000033
417 Ga0500568_0000513
418 Ga0500573_0000099
419 Ga0500622_0000316
420 Ga0500624_000861
421 Ga0500634_0000506
422 2920766910
423 2511197415
424 2513568892
425 2513870403
426 2513911797
427 2513912061
428 2513929382
429 2514002217
430 2514024627
431 2515637727
432 2515642827
433 2515658656
434 2523467631
435 2537872930
436 2545676424
437 2554245156
438 2559297013
439 2585226680
440 2585280917
441 2585324447
442 2585335581
443 2585397081
444 2585403294
445 2585530621
446 2585550095
447 2585554799
448 2585823821
449 2585824098
450 2585992732
451 2599419375
452 2599605073
453 2600196324
454 2600363010
455 2601611140
456 2601747913
457 2616310700
458 2616555560
459 2617384157
460 2643916879
461 2644300544
462 2644521256
463 2644658885
464 2644677303
465 2671114368
466 2739349096
467 2770195875
468 2776269418
469 2776282348
470 2792750228
471 2793281278
472 2808989026
473 2819243509
474 2819557153
475 2819610209
476 2819641077
477 2838030517
478 2838040092
479 2838663872
480 2838678309
481 2838681071
482 2838694896
483 2838708272
484 2838716785
485 2838722605
486 2838727534
487 2838742487
488 2840767121
489 2841846438
490 2841849140
491 2841861799
492 2842080494
493 2842121113
494 2842128111
495 2842133202
496 2842146166
497 2842155196
498 2842173695
499 2842178817
500 2842189892
501 2842214206
502 2842226925
503 2842237684
504 2842294153
505 2842371534
506 2842380550
507 2842387621
508 2842477202
509 2842503999
510 2842512589
511 2842517935
512 2842525393
513 2852395108
514 2854896802
515 2854915954
516 2882636828
517 2894821735
518 2896387271
519 2899792889
520 2899845386
521 2919107146
522 2919116976
523 2919412302
524 2926758489
525 2926763979
526 2933009425
527 2933013564
528 2933017757
529 2933598183
530 2935895418
531 2936368383
532 2958066558
533 2977528258
534 2979090923
535 2979096448
536 2979102184
537 2984509867
538 2984519436
539 2984538207
540 2984604959
541 2989781099
542 2996893162
543 3003666328
544 3003935528
545 3005416613
546 3005447781
547 641641389
548 643598506
549 650843439
550 8003573034
551 8005251419
552 8005260886
553 8005320744
554 8005327689
555 8005376871
556 8005487652
557 8005570184
558 8005647982
559 8005686057
560 8018150511
561 8046770581
562 8054563389

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

107

158

0.91

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

94

317

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vej-assembly1.cif.gz_P triabc transporter from pseudomonas aeruginosa 0.8993 255 324
4qsh-assembly1.cif.gz_B crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8958 60 172
4qsh-assembly1.cif.gz_D crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8955 60 172
4qsh-assembly1.cif.gz_C crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8955 60 172
4qsh-assembly1.cif.gz_A crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8948 60 172
ID Description Score Start End Superfamily
4l8jA03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9586 57 173 2.40.50.100
4tkoB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9409 57 170 2.40.50.100
4kkuC03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9177 60 168 2.40.50.100
4l8jA03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.908 57 173 2.40.50.100
4kkuA01 Mainly Beta;Beta Barrel;conserved putative lor/sdh protein from methanococcus maripaludis s2 fold; 0.9063 256 325 2.40.420.20
ID Description Score Start End GO Terms
AF-A0A530BLY6-F1-model_v4 Efflux transporter periplasmic adaptor subunit 0.9525 255 328 GO:0015562
GO:1990281
AF-A0A1S2VCJ8-F1-model_v4 RND efflux pump membrane fusion protein barrel-sandwich domain-containing protein 0.7941 40 324 GO:0015562
GO:1990281
AF-A0A849IIJ0-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.7618 29 326 GO:0015562
GO:1990281
AF-A0A5R9J7M5-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.7604 25 325 GO:0015562
GO:1990281
AF-A0A498DDC4-F1-model_v4 HlyD family efflux transporter periplasmic adaptor subunit 0.7542 43 251 GO:0030313

Map