F384685

General Info

Members Datasets Scaffolds Average Seq Length
282 203 564 301

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10061331|rootH2_100613314
Length 286
Sequence MATEIKGKNTVIVNPVEQYPQPEFIEQEQELPGLEQKMTPKPDHGENTYKGSGKLVGRKAIITGADSGIGKAVAIAYAREGAEAAAYVEKEGRKAILFPGDISDEALCKEMVDKAVREFGGLDILVNNAAFQVAHESLQDISSEEWDKTIRVNVTSMFYLCKAAEPHLKPGSAVINTTSVNAYTPKPTLIPYTLTKAAIQNFTATLAQLWGEKGIRVNCVAPGPIWTPLIPASFSAEETAKFGAHTPMKRPGQPAELAAVYVLLASQEASYMSGATVPVTGGMPTI

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
34 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
35 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
38 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
41 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
42 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
46 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
69 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
70 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
71 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
72 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
73 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
74 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
75 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
76 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
77 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
81 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
82 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
87 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
90 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
91 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
92 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
93 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
94 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
95 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
96 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
97 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
98 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
101 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
102 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
105 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
108 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
109 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
110 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
111 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
112 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
113 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
114 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
115 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
116 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
117 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
125 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
128 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
137 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
140 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
145 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
146 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
147 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
148 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
152 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
153 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
154 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
155 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
156 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
157 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
158 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
161 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
164 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
165 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
166 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
167 2643221557 Ensifer sp. Root558 Isolate Unclassified
168 2643221584 Caulobacter sp. Root656 Isolate Unclassified
169 2643221591 Devosia sp. Root685 Isolate Unclassified
170 2643221595 Mesorhizobium sp. Root695 Isolate Unclassified
171 2643221610 Ensifer sp. Root74 Isolate Unclassified
172 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
173 2643221668 Ensifer sp. Root423 Isolate Unclassified
174 2643221675 Ensifer sp. Root1298 Isolate Unclassified
175 2643221680 Ensifer sp. Root1312 Isolate Unclassified
176 2643221723 Ensifer sp. Root278 Isolate Unclassified
177 2643221726 Ensifer sp. Root954 Isolate Unclassified
178 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
179 2738541293 Rhizobium sp. GV031 Isolate Unclassified
180 2738543009 Luteibacter sp. OK325 Isolate Unclassified
181 2751185800 Brucella pituitosa AA2 Isolate Unclassified
182 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
183 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
184 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
185 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
186 2831864461 Roseateles noduli HZ7 Isolate Nodule
187 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
188 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
189 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
190 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
191 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
192 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
193 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
194 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
195 2932401849 Devosia sp. 2618 Isolate Rhizosphere
196 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
197 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
198 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
199 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
200 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
201 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
202 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
203 8056375014 Rhizobium redzepovicii 18T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.75
Metatranscriptomes 0.35
Isolates 14.89

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.21
Nodule 3.19
Rhizoplane 1.77
Rhizosphere 51.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10061331 3300003320 Bacteria 6248
2 JGI24739J22299_10019911 3300001989 Bacteria 2399
3 JGI25156J39149_1003919 3300002705 Bacteria 4717
4 JGI25159J45721_1000156 3300002987 Bacteria 32002
5 JGI25151J46595_10040870 3300003187 Bacteria 1693
6 JGI25165J46597_1000149 3300003214 Bacteria 115839
7 rootL2_10003935 3300003322 Bacteria 3689
8 JGI25160J50197_1000203 3300003354 Bacteria 49418
9 JGI25160J50197_1002572 3300003354 Bacteria 8390
10 Ga0055533_1001535 3300003756 Bacteria 6022
11 Ga0055526_1000308 3300003771 Bacteria 40807
12 Ga0055526_1002918 3300003771 Bacteria 11235
13 Ga0055536_1003680 3300003781 Bacteria 8151
14 Ga0055530_10007384 3300003791 Bacteria 4642
15 Ga0055540_1000439 3300003792 Bacteria 32821
16 Ga0055531_10003010 3300003794 Bacteria 10939
17 Ga0055543_1000349 3300004625 Bacteria 31437
18 Ga0055543_1001621 3300004625 Bacteria 8590
19 Ga0055543_1010048 3300004625 Bacteria 2002
20 Ga0065165_1000349 3300005262 Bacteria 75492
21 Ga0065165_1000366 3300005262 Bacteria 73998
22 Ga0065165_1000672 3300005262 Bacteria 49172
23 Ga0065165_1003574 3300005262 Bacteria 10740
24 Ga0070709_10004680 3300005434 Bacteria 7389
25 Ga0070714_100058031 3300005435 Bacteria 3315
26 Ga0070713_100030471 3300005436 Bacteria 4284
27 Ga0070710_10001302 3300005437 Bacteria 11797
28 Ga0070711_100021195 3300005439 Bacteria 4197
29 Ga0068851_10046336 3300005834 Bacteria 2199
30 Ga0075365_10078546 3300006038 Bacteria 2232
31 Ga0075363_100030070 3300006048 Bacteria 2809
32 Ga0070716_100048783 3300006173 Bacteria 2396
33 Ga0105240_10000214 3300009093 Bacteria 117038
34 Ga0105240_10010628 3300009093 Bacteria 12931
35 Ga0105237_10066959 3300009545 Bacteria 3586
36 Ga0105238_10056917 3300009551 Bacteria 3922
37 Ga0105238_10260161 3300009551 Bacteria 1715
38 Ga0105239_10001443 3300010375 Bacteria 31684
39 Ga0105239_10002418 3300010375 Bacteria 23771
40 Ga0105239_10004881 3300010375 Bacteria 15872
41 Ga0157370_10000981 3300013104 Bacteria 36141
42 Ga0157374_10150324 3300013296 Bacteria 2264
43 Ga0163163_10125419 3300014325 Bacteria 2605
44 Ga0182008_10017408 3300014497 Bacteria 3728
45 Ga0182007_10011389 3300015262 Bacteria 3464
46 Ga0182005_1001851 3300015265 Bacteria 8048
47 Ga0163161_10005458 3300017792 Bacteria 8825
48 Ga0209436_100157 3300025208 Bacteria 32790
49 Ga0209674_100063 3300025226 Bacteria 275507
50 Ga0209258_100811 3300025242 Bacteria 18023
51 Ga0209026_1000023 3300025250 Bacteria 357521
52 Ga0209759_1000201 3300025256 Bacteria 94126
53 Ga0209673_1014728 3300025273 Bacteria 3014
54 Ga0209673_1031344 3300025273 Bacteria 1656
55 Ga0209130_1000242 3300025284 Bacteria 69580
56 Ga0209676_1001712 3300025292 Bacteria 18905
57 Ga0209025_1000240 3300025294 Bacteria 128397
58 Ga0209025_1001648 3300025294 Bacteria 27540
59 Ga0209564_1000005 3300025295 Bacteria 1147192
60 Ga0209564_1000338 3300025295 Bacteria 90246
61 Ga0209050_1006679 3300025298 Bacteria 6753
62 Ga0209256_1000162 3300025299 Bacteria 137997
63 Ga0209256_1000573 3300025299 Bacteria 52571
64 Ga0209256_1003310 3300025299 Bacteria 11467
65 Ga0207426_1000298 3300025302 Bacteria 97889
66 Ga0207426_1000483 3300025302 Bacteria 60265
67 Ga0209051_1000600 3300025303 Bacteria 42450
68 Ga0209051_1016166 3300025303 Bacteria 3397
69 Ga0209051_1016600 3300025303 Bacteria 3322
70 Ga0209257_1000300 3300025304 Bacteria 108786
71 Ga0209257_1002029 3300025304 Bacteria 21609
72 Ga0207647_10044327 3300025904 Bacteria 2780
73 Ga0207699_10004658 3300025906 Bacteria 6559
74 Ga0207695_10006154 3300025913 Bacteria 15649
75 Ga0207695_10008640 3300025913 Bacteria 12714
76 Ga0207695_10622365 3300025913 Bacteria 961
77 Ga0207671_10000418 3300025914 Bacteria 58941
78 Ga0207663_10214382 3300025916 Bacteria 1397
79 Ga0207649_10180551 3300025920 Bacteria 1477
80 Ga0207694_10127652 3300025924 Bacteria 2036
81 Ga0207700_10212225 3300025928 Bacteria 1637
82 Ga0207664_10138018 3300025929 Bacteria 2059
83 Ga0207711_10147075 3300025941 Bacteria 2123
84 Ga0207698_10044889 3300026142 Bacteria 3325
85 Ga0207698_10493453 3300026142 Bacteria 1190
86 Ga0307409_100220189 3300031995 Bacteria 1713
87 Ga0307414_10145728 3300032004 Bacteria 1860
88 Ga0395898_0003942 3300037466 Bacteria 16372
89 Ga0395905_0010252 3300037471 Bacteria 9127
90 Ga0395901_0000132 3300038443 Bacteria 96418
91 Ga0436361_0284214 3300039447 Bacteria 9011
92 Ga0436363_1191256 3300039450 Bacteria 1145
93 Ga0451847_0060512 3300041503 Bacteria 7697
94 Ga0451843_0798157 3300041509 Bacteria 2462
95 Ga0466973_0054019 3300044659 Bacteria 3688
96 Ga0466965_0006341 3300044683 Bacteria 5362
97 Ga0466961_0260486 3300044693 Bacteria 1063
98 Ga0466963_0010290 3300044694 Bacteria 5660
99 Ga0466971_0010802 3300044719 Bacteria 3993
100 Ga0466970_0020719 3300044765 Bacteria 3419
101 Ga0466957_0002315 3300044842 Bacteria 10208
102 Ga0466958_0007394 3300045836 Bacteria 6039
103 Ga0495617_000031 3300046452 Bacteria 151115
104 Ga0495617_055399 3300046452 Bacteria 1316
105 Ga0495592_0083455 3300046454 Bacteria 2307
106 Ga0495591_004979 3300046458 Bacteria 6282
107 Ga0495629_0066221 3300046459 Bacteria 2521
108 Ga0495638_0042924 3300046460 Bacteria 2855
109 Ga0495651_0113621 3300046462 Bacteria 1999
110 Ga0495653_0078214 3300046463 Bacteria 2453
111 Ga0495650_0040511 3300046471 Bacteria 1999
112 Ga0495580_0006629 3300046472 Bacteria 9406
113 Ga0495582_0106638 3300046473 Bacteria 1572
114 Ga0495605_0040786 3300046474 Bacteria 2316
115 Ga0495605_0048647 3300046474 Bacteria 2075
116 Ga0495605_0105183 3300046474 Bacteria 1293
117 Ga0495584_0003533 3300046491 Bacteria 8568
118 Ga0495585_0004657 3300046492 Bacteria 8852
119 Ga0495596_0009293 3300046500 Bacteria 4328
120 Ga0495607_0061103 3300046501 Bacteria 2142
121 Ga0495607_0124235 3300046501 Bacteria 1351
122 Ga0495607_0144690 3300046501 Bacteria 1223
123 Ga0495607_0149609 3300046501 Bacteria 1196
124 Ga0495606_0002117 3300046507 Bacteria 24081
125 Ga0495606_0007471 3300046507 Bacteria 9766
126 Ga0495606_0017360 3300046507 Bacteria 5443
127 Ga0495606_0030263 3300046507 Bacteria 3785
128 Ga0495606_0174064 3300046507 Bacteria 1246
129 Ga0495610_0003705 3300046512 Bacteria 11712
130 Ga0495610_0033301 3300046512 Bacteria 2666
131 Ga0495616_0000028 3300046513 Bacteria 133873
132 Ga0495616_0094346 3300046513 Bacteria 1412
133 Ga0495620_0000403 3300046515 Bacteria 28921
134 Ga0495620_0031904 3300046515 Bacteria 2407
135 Ga0495628_0117671 3300046516 Bacteria 2040
136 Ga0495631_0097820 3300046518 Bacteria 1263
137 Ga0495632_0016618 3300046519 Bacteria 4087
138 Ga0495632_0037722 3300046519 Bacteria 2450
139 Ga0495648_0013008 3300046524 Bacteria 6177
140 Ga0495648_0036991 3300046524 Bacteria 3141
141 Ga0495652_0019462 3300046529 Bacteria 6046
142 Ga0495640_0009412 3300046533 Bacteria 7609
143 Ga0495587_0046917 3300046536 Bacteria 2563
144 Ga0495668_0000067 3300046616 Bacteria 176418
145 Ga0495668_0001665 3300046616 Bacteria 20673
146 Ga0495668_0011027 3300046616 Bacteria 5436
147 Ga0495668_0046993 3300046616 Bacteria 2396
148 Ga0495634_0096659 3300046642 Bacteria 1912
149 Ga0495611_0000049 3300046648 Bacteria 85148
150 Ga0495625_0000011 3300046660 Bacteria 377120
151 Ga0495625_0021746 3300046660 Bacteria 4930
152 Ga0495625_0053673 3300046660 Bacteria 2881
153 Ga0495625_0169721 3300046660 Bacteria 1457
154 Ga0495661_0002747 3300046665 Bacteria 13382
155 Ga0495623_0006608 3300046679 Bacteria 7548
156 Ga0495646_0014452 3300046680 Bacteria 5020
157 Ga0495613_0004623 3300046689 Bacteria 10335
158 Ga0495624_0007771 3300046690 Bacteria 7522
159 Ga0495670_0048294 3300046691 Bacteria 2129
160 Ga0495649_0000903 3300046694 Bacteria 23535
161 Ga0495589_0003541 3300046794 Bacteria 8441
162 Ga0495600_0015127 3300046809 Bacteria 4874
163 Ga0495660_0000108 3300046810 Bacteria 88833
164 Ga0495674_0028483 3300047319 Bacteria 5091
165 Ga0495680_0051050 3300047322 Bacteria 3231
166 Ga0495683_0000639 3300047323 Bacteria 26060
167 Ga0495683_0067870 3300047323 Bacteria 1755
168 Ga0495675_0063255 3300047444 Bacteria 2341
169 Ga0495679_000481 3300047446 Bacteria 28836
170 Ga0495673_0000038 3300047469 Bacteria 303785
171 Ga0495673_0000045 3300047469 Bacteria 280765
172 Ga0495673_0034957 3300047469 Bacteria 2320
173 Ga0495686_0006687 3300047472 Bacteria 8775
174 Ga0495686_0017408 3300047472 Bacteria 4844
175 Ga0495686_0033513 3300047472 Bacteria 3315
176 Ga0495686_0064660 3300047472 Bacteria 2264
177 Ga0495593_0098784 3300047673 Bacteria 1498
178 Ga0495626_0109702 3300048091 Bacteria 1196
179 Ga0496100_0041043 3300048903 Bacteria 2947
180 Ga0496103_0234048 3300048906 Bacteria 1182
181 Ga0496113_0022728 3300048916 Bacteria 4440
182 Ga0496113_0125278 3300048916 Bacteria 2011
183 Ga0496115_0000116 3300048918 Bacteria 73024
184 Ga0496116_0000798 3300048919 Bacteria 39923
185 Ga0496116_0036533 3300048919 Bacteria 3435
186 Ga0496116_0038291 3300048919 Bacteria 3332
187 Ga0496117_0002622 3300048920 Bacteria 22321
188 Ga0496117_0010614 3300048920 Bacteria 8357
189 Ga0496118_0002922 3300048921 Bacteria 22203
190 Ga0496118_0009823 3300048921 Bacteria 9579
191 Ga0496119_0000443 3300048922 Bacteria 56795
192 Ga0496119_0002574 3300048922 Bacteria 19714
193 Ga0496119_0003307 3300048922 Bacteria 16824
194 Ga0496119_0006852 3300048922 Bacteria 10428
195 Ga0496120_0000818 3300048923 Bacteria 44506
196 Ga0496120_0001767 3300048923 Bacteria 24357
197 Ga0496120_0030354 3300048923 Bacteria 3287
198 Ga0496121_0000053 3300048924 Bacteria 312611
199 Ga0496121_0001058 3300048924 Bacteria 48765
200 Ga0496121_0001268 3300048924 Bacteria 43515
201 Ga0496121_0002874 3300048924 Bacteria 25364
202 Ga0496121_0007524 3300048924 Bacteria 13139
203 Ga0496121_0020579 3300048924 Bacteria 6517
204 Ga0496121_0092509 3300048924 Bacteria 2357
205 Ga0496121_0105269 3300048924 Bacteria 2166
206 Ga0496121_0257821 3300048924 Bacteria 1206
207 Ga0496122_0004110 3300048925 Bacteria 18418
208 Ga0496122_0213456 3300048925 Bacteria 1115
209 Ga0496123_0012128 3300048926 Bacteria 7384
210 Ga0496124_0001498 3300048927 Bacteria 34209
211 Ga0496124_0023689 3300048927 Bacteria 5599
212 Ga0496124_0076345 3300048927 Bacteria 2766
213 Ga0496125_0000143 3300048928 Bacteria 156688
214 Ga0496125_0004596 3300048928 Bacteria 15779
215 Ga0496125_0019156 3300048928 Bacteria 6468
216 Ga0496125_0042496 3300048928 Bacteria 3870
217 Ga0496125_0054662 3300048928 Bacteria 3260
218 Ga0496126_0006362 3300048929 Bacteria 13168
219 Ga0501300_000847 3300049523 Bacteria 4656
220 Ga0501315_001003 3300049531 Bacteria 2242
221 Ga0501222_002005 3300049662 Bacteria 2822
222 Ga0501221_002637 3300049704 Bacteria 2954
223 Ga0501229_000256 3300049706 Bacteria 6008
224 Ga0501044_0049701 3300049823 Bacteria 4329
225 nmdc:mga03n38_17484_c1 3300050490 Bacteria 2809
226 nmdc:mga07m45_175272_c1 3300050496 Bacteria 1247
227 Ga0500610_0001271 3300053079 Bacteria 8449
228 Ga0495655_0031904 3300053083 Bacteria 1285
229 Ga0500578_0061064 3300053086 Bacteria 2407
230 Ga0500578_0175059 3300053086 Bacteria 1325
231 Ga0500556_0000293 3300053104 Bacteria 38677
232 Ga0500569_005086 3300053109 Bacteria 2808
233 Ga0500569_009946 3300053109 Bacteria 2224
234 Ga0500658_0021396 3300053134 Bacteria 2449
235 Ga0500659_0112868 3300053135 Bacteria 1396
236 Ga0500622_0003735 3300053156 Bacteria 9964
237 Ga0500622_0074107 3300053156 Bacteria 1716
238 Ga0500627_0096669 3300053158 Bacteria 1324
239 Ga0500633_0002075 3300053160 Bacteria 4026
240 Ga0466962_0001295 3300061719 Bacteria 11551
241 2513580984 2513237085 Bacteria 7695351
242 2515692312 2515154123 Bacteria 6387382
243 2585530418 2585427526 Bacteria 7258840
244 2616309896 2615840626 Bacteria 7921970
245 2643805136 2643221557 Bacteria 7184309
246 2643927805 2643221584 Bacteria 5511711
247 2643965265 2643221591 Bacteria 4397626
248 2643985740 2643221595 Bacteria 6565519
249 2644065625 2643221610 Bacteria 7480339
250 2644204567 2643221636 Bacteria 6583769
251 2644375399 2643221668 Bacteria 7306521
252 2644417955 2643221675 Bacteria 7473456
253 2644451126 2643221680 Bacteria 7473610
254 2644673460 2643221723 Bacteria 7095460
255 2644687473 2643221726 Bacteria 7455827
256 2721029248 2718218334 Bacteria 4765486
257 2738804445 2738541293 Bacteria 7065685
258 2739229018 2738543009 Bacteria 4944499
259 2753361340 2751185800 Bacteria 5467370
260 2808968102 2808606384 Bacteria 8474373
261 2809002933 2808606390 Bacteria 8476311
262 2809010211 2808606391 Bacteria 8308166
263 2821130923 2821123053 Bacteria 7836056
264 2831869835 2831864461 Bacteria 6502356
265 2842309005 2842304105 Bacteria 7023636
266 2843748621 2843744320 Bacteria 5659202
267 2857359560 2857357740 Bacteria 9937880
268 2857364785 2857357740 Bacteria 9937880
269 2857509465 2857504554 Bacteria 5369913
270 2894819927 2894817345 Bacteria 4892941
271 2903451839 2903448605 Bacteria 7357801
272 2919107401 2919100787 Bacteria 7710546
273 2919455801 2919450847 Bacteria 5631160
274 2932405623 2932401849 Bacteria 4262978
275 2933575585 2933570622 Bacteria 7023390
276 2937825625 2937822353 Bacteria 7290551
277 2941489064 2941485952 Bacteria 3591484
278 2968088516 2968083720 Bacteria 7351627
279 2987672046 2987666974 Bacteria 6509233
280 8001850851 8001845381 Bacteria 5804942
281 8040168701 8040167225 Bacteria 6542727
282 8056378857 8056375014 Bacteria 7006639
283 rootH2_10061331
284 JGI24739J22299_10019911
285 JGI25156J39149_1003919
286 JGI25159J45721_1000156
287 JGI25151J46595_10040870
288 JGI25165J46597_1000149
289 rootL2_10003935
290 JGI25160J50197_1000203
291 JGI25160J50197_1002572
292 Ga0055533_1001535
293 Ga0055526_1000308
294 Ga0055526_1002918
295 Ga0055536_1003680
296 Ga0055530_10007384
297 Ga0055540_1000439
298 Ga0055531_10003010
299 Ga0055543_1000349
300 Ga0055543_1001621
301 Ga0055543_1010048
302 Ga0065165_1000349
303 Ga0065165_1000366
304 Ga0065165_1000672
305 Ga0065165_1003574
306 Ga0070709_10004680
307 Ga0070714_100058031
308 Ga0070713_100030471
309 Ga0070710_10001302
310 Ga0070711_100021195
311 Ga0068851_10046336
312 Ga0075365_10078546
313 Ga0075363_100030070
314 Ga0070716_100048783
315 Ga0105240_10000214
316 Ga0105240_10010628
317 Ga0105237_10066959
318 Ga0105238_10056917
319 Ga0105238_10260161
320 Ga0105239_10001443
321 Ga0105239_10002418
322 Ga0105239_10004881
323 Ga0157370_10000981
324 Ga0157374_10150324
325 Ga0163163_10125419
326 Ga0182008_10017408
327 Ga0182007_10011389
328 Ga0182005_1001851
329 Ga0163161_10005458
330 Ga0209436_100157
331 Ga0209674_100063
332 Ga0209258_100811
333 Ga0209026_1000023
334 Ga0209759_1000201
335 Ga0209673_1014728
336 Ga0209673_1031344
337 Ga0209130_1000242
338 Ga0209676_1001712
339 Ga0209025_1000240
340 Ga0209025_1001648
341 Ga0209564_1000005
342 Ga0209564_1000338
343 Ga0209050_1006679
344 Ga0209256_1000162
345 Ga0209256_1000573
346 Ga0209256_1003310
347 Ga0207426_1000298
348 Ga0207426_1000483
349 Ga0209051_1000600
350 Ga0209051_1016166
351 Ga0209051_1016600
352 Ga0209257_1000300
353 Ga0209257_1002029
354 Ga0207647_10044327
355 Ga0207699_10004658
356 Ga0207695_10006154
357 Ga0207695_10008640
358 Ga0207695_10622365
359 Ga0207671_10000418
360 Ga0207663_10214382
361 Ga0207649_10180551
362 Ga0207694_10127652
363 Ga0207700_10212225
364 Ga0207664_10138018
365 Ga0207711_10147075
366 Ga0207698_10044889
367 Ga0207698_10493453
368 Ga0307409_100220189
369 Ga0307414_10145728
370 Ga0395898_0003942
371 Ga0395905_0010252
372 Ga0395901_0000132
373 Ga0436361_0284214
374 Ga0436363_1191256
375 Ga0451847_0060512
376 Ga0451843_0798157
377 Ga0466973_0054019
378 Ga0466965_0006341
379 Ga0466961_0260486
380 Ga0466963_0010290
381 Ga0466971_0010802
382 Ga0466970_0020719
383 Ga0466957_0002315
384 Ga0466958_0007394
385 Ga0495617_000031
386 Ga0495617_055399
387 Ga0495592_0083455
388 Ga0495591_004979
389 Ga0495629_0066221
390 Ga0495638_0042924
391 Ga0495651_0113621
392 Ga0495653_0078214
393 Ga0495650_0040511
394 Ga0495580_0006629
395 Ga0495582_0106638
396 Ga0495605_0040786
397 Ga0495605_0048647
398 Ga0495605_0105183
399 Ga0495584_0003533
400 Ga0495585_0004657
401 Ga0495596_0009293
402 Ga0495607_0061103
403 Ga0495607_0124235
404 Ga0495607_0144690
405 Ga0495607_0149609
406 Ga0495606_0002117
407 Ga0495606_0007471
408 Ga0495606_0017360
409 Ga0495606_0030263
410 Ga0495606_0174064
411 Ga0495610_0003705
412 Ga0495610_0033301
413 Ga0495616_0000028
414 Ga0495616_0094346
415 Ga0495620_0000403
416 Ga0495620_0031904
417 Ga0495628_0117671
418 Ga0495631_0097820
419 Ga0495632_0016618
420 Ga0495632_0037722
421 Ga0495648_0013008
422 Ga0495648_0036991
423 Ga0495652_0019462
424 Ga0495640_0009412
425 Ga0495587_0046917
426 Ga0495668_0000067
427 Ga0495668_0001665
428 Ga0495668_0011027
429 Ga0495668_0046993
430 Ga0495634_0096659
431 Ga0495611_0000049
432 Ga0495625_0000011
433 Ga0495625_0021746
434 Ga0495625_0053673
435 Ga0495625_0169721
436 Ga0495661_0002747
437 Ga0495623_0006608
438 Ga0495646_0014452
439 Ga0495613_0004623
440 Ga0495624_0007771
441 Ga0495670_0048294
442 Ga0495649_0000903
443 Ga0495589_0003541
444 Ga0495600_0015127
445 Ga0495660_0000108
446 Ga0495674_0028483
447 Ga0495680_0051050
448 Ga0495683_0000639
449 Ga0495683_0067870
450 Ga0495675_0063255
451 Ga0495679_000481
452 Ga0495673_0000038
453 Ga0495673_0000045
454 Ga0495673_0034957
455 Ga0495686_0006687
456 Ga0495686_0017408
457 Ga0495686_0033513
458 Ga0495686_0064660
459 Ga0495593_0098784
460 Ga0495626_0109702
461 Ga0496100_0041043
462 Ga0496103_0234048
463 Ga0496113_0022728
464 Ga0496113_0125278
465 Ga0496115_0000116
466 Ga0496116_0000798
467 Ga0496116_0036533
468 Ga0496116_0038291
469 Ga0496117_0002622
470 Ga0496117_0010614
471 Ga0496118_0002922
472 Ga0496118_0009823
473 Ga0496119_0000443
474 Ga0496119_0002574
475 Ga0496119_0003307
476 Ga0496119_0006852
477 Ga0496120_0000818
478 Ga0496120_0001767
479 Ga0496120_0030354
480 Ga0496121_0000053
481 Ga0496121_0001058
482 Ga0496121_0001268
483 Ga0496121_0002874
484 Ga0496121_0007524
485 Ga0496121_0020579
486 Ga0496121_0092509
487 Ga0496121_0105269
488 Ga0496121_0257821
489 Ga0496122_0004110
490 Ga0496122_0213456
491 Ga0496123_0012128
492 Ga0496124_0001498
493 Ga0496124_0023689
494 Ga0496124_0076345
495 Ga0496125_0000143
496 Ga0496125_0004596
497 Ga0496125_0019156
498 Ga0496125_0042496
499 Ga0496125_0054662
500 Ga0496126_0006362
501 Ga0501300_000847
502 Ga0501315_001003
503 Ga0501222_002005
504 Ga0501221_002637
505 Ga0501229_000256
506 Ga0501044_0049701
507 nmdc:mga03n38_17484_c1
508 nmdc:mga07m45_175272_c1
509 Ga0500610_0001271
510 Ga0495655_0031904
511 Ga0500578_0061064
512 Ga0500578_0175059
513 Ga0500556_0000293
514 Ga0500569_005086
515 Ga0500569_009946
516 Ga0500658_0021396
517 Ga0500659_0112868
518 Ga0500622_0003735
519 Ga0500622_0074107
520 Ga0500627_0096669
521 Ga0500633_0002075
522 Ga0466962_0001295
523 2513580984
524 2515692312
525 2585530418
526 2616309896
527 2643805136
528 2643927805
529 2643965265
530 2643985740
531 2644065625
532 2644204567
533 2644375399
534 2644417955
535 2644451126
536 2644673460
537 2644687473
538 2721029248
539 2738804445
540 2739229018
541 2753361340
542 2808968102
543 2809002933
544 2809010211
545 2821130923
546 2831869835
547 2842309005
548 2843748621
549 2857359560
550 2857364785
551 2857509465
552 2894819927
553 2903451839
554 2919107401
555 2919455801
556 2932405623
557 2933575585
558 2937825625
559 2941489064
560 2968088516
561 2987672046
562 8001850851
563 8040168701
564 8056378857

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

58

238

0.92

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

64

284

0.91

PF08659

KR

KR domain

79

226

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5u8p-assembly1.cif.gz_A crystal structure of a short chain dehydrogenase from burkholderia cenocepacia j2315 in complex with nad 0.9951 50 331
3r3s-assembly1.cif.gz_D structure of the ygha oxidoreductase from salmonella enterica 0.9914 49 333
3i3o-assembly2.cif.gz_G 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9836 71 329
3i3o-assembly1.cif.gz_A 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9801 55 329
3i3o-assembly2.cif.gz_H 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone 0.9758 59 329
ID Description Score Start End Superfamily
3r3sA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9917 49 333 3.40.50.720
3i3oG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9836 71 329 3.40.50.720
af_K7KGR3_30_220_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9763 151 329 3.40.50.720
3r3sA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9648 49 333 3.40.50.720
af_Q75KH3_1_297_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.96 52 329 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A418IZU3-F1-model_v4 deleted 0.9882 138 267
AF-A0A519T453-F1-model_v4 SDR family oxidoreductase 0.9843 78 330 GO:0016614
AF-A0A1V3CZV1-F1-model_v4 deleted 0.9843 92 333
AF-A0A4Q5VLK3-F1-model_v4 deleted 0.982 171 331
AF-A0A418IZU3-F1-model_v4 deleted 0.9808 138 267

Map