F385258

General Info

Members Datasets Scaffolds Average Seq Length
282 216 217 628

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2599185156|2599335094
Length 706
Sequence HDDILRATSELGFHGVSNSSFQAGLQVSPALDRSLRRPPIFTVFVDFLMLYLPTGRKFETPKTSVIRRIWGNIMTRPITWRDRARYQFDKSMAAGPIALIGWLAVISLIVIVLAGLLLAISGIAQDGGEPVSFIEGAWESLMRTMDAGAMGGDVGWSFRGVSLAVTVAGIFVFSALIGVLSSGLDEKLDELRKGRSHVLEKEHTIIFNWSPSIFDVISELVIANRSRRRPRIVIMAGKDKVEMEDEIADKIPDLGNTRIICRSGDPTDLHDINIVNPQASRAIVVLSPEGDYADSQVIKTILALVNDPSRRPERYRIAAEIRDAANAEVARIVGGSELQLVLADELISRIVVSSSRQSGLSGVYTELLDFDGSEIYALEQPDLVGKSFGAAVMAYDTSTLIGVGTTDGKVHLNPPTNRVIAAGERAILIAEDDDTIRLRTGDFTVDRDVIRPRPPVTRRAETTLLLGWNRRGPIITQELSRYVAPGSRLMIAADTPELLDEVAAMPYLNENLSVECRVIDTSNRAALDALDVPSFDHVLVLGYSDHLAAQPADTATLVTLLQLRKIAEAANTHIGIVSEMIDVRNRDLAAVTRADDFVVSNKLVSLMLAQASENELMADIFNELLDEDGSEIYMRAVTDYIAIDRPVNFYTITLAALMRGEVALGYSKVGAAVRDTRGLGGVVVNPAKGEAVQYGAGDKLIILARD

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
3 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
4 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
5 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
6 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
7 2512875016 Mesorhizobium japonicum R7A Isolate Nodule
8 2512875024 Mesorhizobium loti R88b Isolate Nodule
9 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
10 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
11 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
12 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
13 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
14 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
15 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
16 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
17 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
18 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
19 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
20 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
21 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
22 2588253730 Mesorhizobium huakuii 7653R Isolate Rhizosphere
23 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
24 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
25 2643221607 Rhizobium sp. Root73 Isolate Unclassified
26 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
27 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
28 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
29 2643221674 Devosia sp. Root436 Isolate Unclassified
30 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
31 2643221688 Rhizobium sp. Root482 Isolate Unclassified
32 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
33 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
34 2643221718 Rhizobium sp. Root268 Isolate Unclassified
35 2643221719 Rhizobium sp. Root274 Isolate Unclassified
36 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
37 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
38 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
39 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
40 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
41 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
42 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
43 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
44 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
45 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
46 2876363079 Mesorhizobium loti R7ANS::ICEMlSym2042 Isolate Nodule
47 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
48 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
49 2903521522 Mesorhizobium loti R7ANS::ICEMlSym2014 Isolate Nodule
50 2903528002 Mesorhizobium loti R7ANS::ICEMlSym2037 Isolate Nodule
51 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
52 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
53 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
54 2963644680 Mesorhizobium japonicum R7A Isolate Nodule
55 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
56 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
57 2977986579 Mesorhizobium intechi BD68 Isolate Unclassified
58 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
59 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
60 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
61 3004167301 Mesorhizobium loti 582 Isolate Unclassified
62 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
63 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
64 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
65 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
66 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
67 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
68 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
69 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
70 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
71 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
72 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
73 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
74 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
75 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
76 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
77 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
78 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
79 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
80 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
81 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
82 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
83 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
84 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
85 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
86 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
87 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
88 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
89 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
90 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
91 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
92 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
93 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
94 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
95 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
96 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
97 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
98 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
99 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
100 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
101 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
102 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
103 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
104 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
105 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
106 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
107 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
108 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
109 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
110 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
111 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
112 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
113 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
114 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
115 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
116 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
117 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
119 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
121 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
122 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
123 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
125 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
144 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
145 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
146 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
147 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
148 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
149 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
150 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
151 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
152 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
153 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
154 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
155 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
156 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
157 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
158 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
159 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
160 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
161 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
162 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
163 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
164 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
165 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
166 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
167 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
168 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
169 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
170 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
171 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
172 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
173 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
174 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
175 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
176 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
177 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
178 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
179 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
180 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
181 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
182 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
183 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
184 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
185 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
186 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
187 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
188 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
189 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
191 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
192 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
193 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
194 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
195 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
196 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
197 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
198 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
199 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
200 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
201 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
202 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
203 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
204 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
205 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
206 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
207 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
208 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
209 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
210 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
211 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
212 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
213 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
214 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
215 637000159 Mesorhizobium japonicum MAFF 303099 Isolate Unclassified
216 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.95
Metatranscriptomes 0
Isolates 23.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.31
Nodule 7.09
Rhizoplane 1.06
Rhizosphere 53.55
Stem 0
Stem Tuber 0
Unclassified 21.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_121814 2162886007 Bacteria 5476
2 SwRhRL2b_contig_704022 2162886007 Bacteria 5478
3 JGI25157J39369_1001549 3300002741 Bacteria 8294
4 Ga0055542_1000740 3300003762 Bacteria 25274
5 Ga0055536_1003423 3300003781 Bacteria 8527
6 Ga0055528_1000331 3300003790 Bacteria 39811
7 Ga0055540_1011614 3300003792 Bacteria 2824
8 Ga0055531_10001006 3300003794 Bacteria 22375
9 Ga0065165_1003448 3300005262 Bacteria 11109
10 Ga0065704_10003914 3300005289 Bacteria 5019
11 Ga0065704_10070229 3300005289 Bacteria 56373
12 Ga0065707_10081970 3300005295 Bacteria 26755
13 Ga0065707_10095805 3300005295 Bacteria 3336
14 Ga0070658_10002302 3300005327 Bacteria 16035
15 Ga0070658_10033794 3300005327 Bacteria 4115
16 Ga0070658_10045574 3300005327 Bacteria 3546
17 Ga0070683_100034123 3300005329 Unclassified 4646
18 Ga0070666_10035549 3300005335 Bacteria 3304
19 Ga0068868_100000063 3300005338 Bacteria 61783
20 Ga0070660_100002173 3300005339 Bacteria 13515
21 Ga0070660_100007085 3300005339 Bacteria 7791
22 Ga0070661_100004586 3300005344 Bacteria 9502
23 Ga0070659_100000034 3300005366 Bacteria 115416
24 Ga0070694_100033093 3300005444 Unclassified 3398
25 Ga0070698_100029703 3300005471 Bacteria 5673
26 Ga0070698_100112035 3300005471 Bacteria 2694
27 Ga0070699_100022460 3300005518 Bacteria 5438
28 Ga0070699_100082769 3300005518 Bacteria 2798
29 Ga0070672_100092253 3300005543 Bacteria 2445
30 Ga0070686_100000280 3300005544 Bacteria 34516
31 Ga0070695_100003401 3300005545 Bacteria 9305
32 Ga0070696_100010901 3300005546 Bacteria 6092
33 Ga0070665_100000105 3300005548 Bacteria 157734
34 Ga0070665_100005704 3300005548 Bacteria 12781
35 Ga0070665_100045802 3300005548 Bacteria 4393
36 Ga0070665_100066443 3300005548 Bacteria 3618
37 Ga0070704_100003497 3300005549 Bacteria 9019
38 Ga0068855_100033521 3300005563 Bacteria 6128
39 Ga0068854_100006327 3300005578 Bacteria 7531
40 Ga0068856_100030313 3300005614 Bacteria 5288
41 Ga0068856_100046114 3300005614 Bacteria 4293
42 Ga0068852_100004555 3300005616 Bacteria 9815
43 Ga0068852_100042641 3300005616 Bacteria 3842
44 Ga0068859_100015303 3300005617 Bacteria 7705
45 Ga0081539_10006942 3300005985 Bacteria 10529
46 Ga0081539_10031555 3300005985 Bacteria 3263
47 Ga0075365_10023482 3300006038 Bacteria 3879
48 Ga0075365_10044877 3300006038 Bacteria 2898
49 Ga0075363_100002377 3300006048 Bacteria 7666
50 Ga0075362_10004598 3300006177 Bacteria 4972
51 Ga0075367_10018915 3300006178 Bacteria 3809
52 Ga0075367_10072536 3300006178 Bacteria 2073
53 Ga0075369_10003893 3300006186 Bacteria 5474
54 Ga0075427_10002854 3300006194 Unclassified 2347
55 Ga0075428_100018332 3300006844 Bacteria 7737
56 Ga0075431_100102427 3300006847 Unclassified 2955
57 Ga0075429_100003152 3300006880 Bacteria 14013
58 Ga0075429_100009638 3300006880 Bacteria 8378
59 Ga0097620_100015303 3300006931 Bacteria 7705
60 Ga0075435_100007387 3300007076 Bacteria 7827
61 Ga0105240_10062463 3300009093 Bacteria 4637
62 Ga0105240_10090678 3300009093 Bacteria 3735
63 Ga0105245_10045399 3300009098 Bacteria 3924
64 Ga0114129_10011230 3300009147 Bacteria 12769
65 Ga0114129_10027088 3300009147 Bacteria 8116
66 Ga0114129_10035512 3300009147 Bacteria 7041
67 Ga0105241_10028597 3300009174 Bacteria 4155
68 Ga0105249_10040511 3300009553 Unclassified 4231
69 Ga0105239_10045245 3300010375 Bacteria 4824
70 Ga0157370_10035806 3300013104 Bacteria 4821
71 Ga0157370_10066267 3300013104 Bacteria 3415
72 Ga0157372_10084905 3300013307 Bacteria 3590
73 Ga0213876_10003637 3300021384 Bacteria 8768
74 Ga0209026_1000024 3300025250 Bacteria 355839
75 Ga0209148_1000050 3300025254 Bacteria 413178
76 Ga0209759_1000302 3300025256 Bacteria 67678
77 Ga0209455_1000379 3300025272 Bacteria 40354
78 Ga0209673_1000384 3300025273 Bacteria 79540
79 Ga0209564_1000388 3300025295 Bacteria 79331
80 Ga0209758_1001465 3300025297 Bacteria 27673
81 Ga0209050_1002400 3300025298 Bacteria 16206
82 Ga0209256_1000738 3300025299 Bacteria 42913
83 Ga0209051_1007593 3300025303 Bacteria 5904
84 Ga0209257_1003279 3300025304 Bacteria 14115
85 Ga0207680_10005343 3300025903 Bacteria 6135
86 Ga0207705_10035462 3300025909 Bacteria 3569
87 Ga0207684_10074080 3300025910 Bacteria 2892
88 Ga0207657_10005363 3300025919 Bacteria 13430
89 Ga0207657_10024470 3300025919 Bacteria 5588
90 Ga0207650_10025408 3300025925 Bacteria 4219
91 Ga0207687_10054067 3300025927 Bacteria 2808
92 Ga0207690_10000005 3300025932 Bacteria 581199
93 Ga0207691_10113964 3300025940 Bacteria 2402
94 Ga0207667_10005887 3300025949 Bacteria 14932
95 Ga0207712_10037213 3300025961 Bacteria 3319
96 Ga0207677_10000044 3300026023 Bacteria 107614
97 Ga0207678_10072985 3300026067 Bacteria 2941
98 Ga0207702_10016627 3300026078 Bacteria 6087
99 Ga0207702_10133249 3300026078 Bacteria 2239
100 Ga0207698_10012509 3300026142 Bacteria 5557
101 Ga0268266_10000394 3300028379 Bacteria 66190
102 Ga0268265_10093236 3300028380 Unclassified 2412
103 Ga0265318_10003045 3300028577 Bacteria 8630
104 Ga0307515_10000112 3300028794 Bacteria 195015
105 Ga0307515_10000788 3300028794 Bacteria 72975
106 Ga0307515_10113219 3300028794 Bacteria 3147
107 Ga0265314_10027626 3300031711 Bacteria 4248
108 Ga0316577_10011534 3300031733 Bacteria 4789
109 Ga0307407_10018880 3300031903 Bacteria 3499
110 Ga0373942_0013008 3300035207 Bacteria 1996
111 Ga0373927_0000386 3300035695 Bacteria 34256
112 Ga0373925_0007724 3300037068 Bacteria 7834
113 Ga0395905_0000510 3300037471 Bacteria 53278
114 Ga0395905_0005116 3300037471 Bacteria 13477
115 Ga0395905_0039623 3300037471 Bacteria 4420
116 Ga0436365_0157873 3300039437 Bacteria 3628
117 Ga0436365_1219478 3300039437 Bacteria 12467
118 Ga0451833_0674742 3300041491 Bacteria 3278
119 Ga0451835_0091956 3300041492 Bacteria 3381
120 Ga0451839_0205920 3300041496 Bacteria 4759
121 Ga0451841_0754316 3300041498 Bacteria 3474
122 Ga0451845_0130359 3300041501 Bacteria 6724
123 Ga0451847_0072406 3300041503 Bacteria 3882
124 Ga0451849_0845786 3300041505 Bacteria 3712
125 Ga0451851_0313650 3300041507 Bacteria 4084
126 Ga0451843_0495660 3300041509 Bacteria 2279
127 Ga0451855_1280980 3300041511 Bacteria 2264
128 Ga0453683_0020615 3300044673 Unclassified 4212
129 Ga0453683_0034876 3300044673 Bacteria 3171
130 Ga0453683_0075911 3300044673 Bacteria 2104
131 Ga0453684_0000894 3300044712 Bacteria 99515
132 Ga0453684_0001019 3300044712 Bacteria 90275
133 Ga0453684_0001056 3300044712 Bacteria 87692
134 Ga0453684_0004484 3300044712 Bacteria 29353
135 Ga0453684_0007770 3300044712 Bacteria 19567
136 Ga0453684_0014587 3300044712 Bacteria 12545
137 Ga0453684_0022171 3300044712 Bacteria 9440
138 Ga0453684_0055038 3300044712 Bacteria 5175
139 Ga0453684_0114205 3300044712 Unclassified 3274
140 Ga0453684_0177594 3300044712 Unclassified 2503
141 Ga0451576_0000152 3300045051 Bacteria 176305
142 Ga0451576_0002941 3300045051 Bacteria 24186
143 Ga0495590_0001102 3300046457 Bacteria 11881
144 Ga0495638_0000195 3300046460 Bacteria 88030
145 Ga0495638_0025685 3300046460 Bacteria 3825
146 Ga0495605_0000779 3300046474 Bacteria 22868
147 Ga0495585_0020136 3300046492 Bacteria 3839
148 Ga0495585_0038700 3300046492 Bacteria 2683
149 Ga0495616_0017695 3300046513 Bacteria 3926
150 Ga0495631_0001355 3300046518 Bacteria 14991
151 Ga0495631_0032217 3300046518 Bacteria 2364
152 Ga0495633_0027942 3300046558 Bacteria 2751
153 Ga0495656_0033815 3300046615 Bacteria 2089
154 Ga0495668_0021588 3300046616 Bacteria 3689
155 Ga0495625_0000621 3300046660 Bacteria 51568
156 Ga0495670_0017782 3300046691 Bacteria 3501
157 Ga0495671_0032433 3300046692 Bacteria 2667
158 Ga0495672_0012735 3300047320 Bacteria 5848
159 Ga0495672_0019582 3300047320 Bacteria 4461
160 Ga0496108_0000152 3300048911 Bacteria 66245
161 Ga0496112_0000005 3300048915 Bacteria 525541
162 Ga0496118_0007156 3300048921 Bacteria 11943
163 Ga0496120_0018676 3300048923 Bacteria 4460
164 Ga0496121_0074500 3300048924 Bacteria 2715
165 Ga0496121_0095991 3300048924 Bacteria 2302
166 Ga0496122_0000369 3300048925 Bacteria 96672
167 Ga0496123_0000054 3300048926 Bacteria 234046
168 Ga0496124_0017762 3300048927 Bacteria 6690
169 Ga0496126_0011268 3300048929 Bacteria 9276
170 Ga0496126_0076814 3300048929 Bacteria 2962
171 Ga0496126_0077537 3300048929 Bacteria 2946
172 Ga0495678_008381 3300049459 Bacteria 5221
173 Ga0501034_0022838 3300049571 Bacteria 6372
174 Ga0501034_0049875 3300049571 Bacteria 4223
175 Ga0501034_0076202 3300049571 Bacteria 3361
176 Ga0501073_0018835 3300049589 Bacteria 4989
177 Ga0501073_0044512 3300049589 Bacteria 3128
178 Ga0501076_0013060 3300049592 Bacteria 6218
179 Ga0501079_0031490 3300049741 Bacteria 4077
180 Ga0501080_0000271 3300049742 Bacteria 39284
181 Ga0501080_0036875 3300049742 Bacteria 4564
182 nmdc:mga00v17_21430_c1 3300050491 Bacteria 2659
183 nmdc:mga0yw44_17539_c1 3300050492 Bacteria 3898
184 nmdc:mga0yw44_2757_c1 3300050492 Bacteria 7601
185 nmdc:mga05p37_1733_c1 3300050507 Bacteria 25460
186 nmdc:mga05p37_4824_c1 3300050507 Bacteria 15771
187 nmdc:mga05p37_630_c1 3300050507 Bacteria 38995
188 nmdc:mga05p37_74893_c1 3300050507 Unclassified 4167
189 nmdc:mga09592_39352_c1 3300050508 Bacteria 3972
190 nmdc:mga09592_5958_c1 3300050508 Bacteria 9935
191 nmdc:mga09592_7128_c1 3300050508 Bacteria 9089
192 nmdc:mga09592_95575_c1 3300050508 Bacteria 2542
193 nmdc:mga0rr50_6076_c1 3300050513 Bacteria 7297
194 Ga0500556_0000343 3300053104 Bacteria 34743
195 Ga0500557_005949 3300053105 Bacteria 2718
196 Ga0500562_013171 3300053108 Bacteria 2108
197 Ga0500569_001696 3300053109 Bacteria 4205
198 Ga0500593_013988 3300053117 Bacteria 3434
199 Ga0500594_0004145 3300053118 Bacteria 3196
200 Ga0500655_002422 3300053133 Bacteria 3402
201 Ga0500559_0000541 3300053136 Bacteria 26152
202 Ga0500559_0003276 3300053136 Bacteria 8032
203 Ga0500568_0000393 3300053139 Bacteria 33388
204 Ga0500568_0011120 3300053139 Bacteria 4193
205 Ga0500573_0000519 3300053140 Bacteria 16733
206 Ga0500573_0011479 3300053140 Bacteria 4961
207 Ga0500573_0052402 3300053140 Bacteria 2346
208 Ga0500573_0052949 3300053140 Bacteria 2333
209 Ga0500577_0000158 3300053142 Bacteria 16890
210 Ga0500604_0000174 3300053151 Bacteria 18388
211 Ga0500616_0000400 3300053153 Bacteria 59475
212 Ga0500616_0001005 3300053153 Bacteria 30333
213 Ga0500616_0002450 3300053153 Bacteria 15422
214 Ga0500622_0001031 3300053156 Bacteria 23303
215 Ga0501084_0007816 3300054114 Bacteria 8800
216 Ga0501084_0015574 3300054114 Bacteria 6307
217 Ga0530510_0049338 3300061734 Bacteria 3042

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050508 nmdc:mga09592_95575_c1 nmdc:mga09592_95575_c1_16_1656 546
2 3300048929 Ga0496126_0076814 Ga0496126_0076814_1257_2930 555
3 3300047320 Ga0495672_0012735 Ga0495672_0012735_2864_4759 565
4 3300053108 Ga0500562_013171 Ga0500562_013171_372_2096 572
5 3300013104 Ga0157370_10066267 Ga0157370_100662673 576
6 3300053139 Ga0500568_0011120 Ga0500568_0011120_472_2361 577
7 3300035207 Ga0373942_0013008 Ga0373942_0013008_10_1791 583
8 iso_pu_bacteria 2510917030 2511196472 586
9 3300049571 Ga0501034_0076202 Ga0501034_0076202_787_2706 588
10 3300049589 Ga0501073_0018835 Ga0501073_0018835_1286_3175 589
11 iso_pu_bacteria 2510917026 2511170413 589
12 3300048929 Ga0496126_0077537 Ga0496126_0077537_1148_2929 591
13 3300049742 Ga0501080_0000271 Ga0501080_0000271_4121_6007 593
14 3300049571 Ga0501034_0022838 Ga0501034_0022838_3921_5807 594
15 3300053136 Ga0500559_0003276 Ga0500559_0003276_5286_7100 594
16 3300053153 Ga0500616_0001005 Ga0500616_0001005_26538_28421 594
17 3300046457 Ga0495590_0001102 Ga0495590_0001102_2394_4289 596
18 3300005295 Ga0065707_10095805 Ga0065707_100958053 599
19 3300005616 Ga0068852_100042641 Ga0068852_1000426413 600
20 3300026078 Ga0207702_10016627 Ga0207702_100166274 600
21 3300005985 Ga0081539_10031555 Ga0081539_100315554 603
22 3300005548 Ga0070665_100000105 Ga0070665_100000105153 604
23 3300009098 Ga0105245_10045399 Ga0105245_100453994 604
24 3300025927 Ga0207687_10054067 Ga0207687_100540672 604
25 3300028379 Ga0268266_10000394 Ga0268266_1000039428 604
26 3300006186 Ga0075369_10003893 Ga0075369_100038937 605
27 3300048911 Ga0496108_0000152 Ga0496108_0000152_21873_23771 605
28 3300049589 Ga0501073_0044512 Ga0501073_0044512_29_1849 605
29 3300053140 Ga0500573_0011479 Ga0500573_0011479_2829_4712 605
30 3300048915 Ga0496112_0000005 Ga0496112_0000005_115036_117054 606
31 3300050491 nmdc:mga00v17_21430_c1 nmdc:mga00v17_21430_c1_442_2334 607
32 3300005544 Ga0070686_100000280 Ga0070686_1000002809 608
33 3300006038 Ga0075365_10023482 Ga0075365_100234821 608
34 3300050492 nmdc:mga0yw44_17539_c1 nmdc:mga0yw44_17539_c1_122_2014 608
35 3300053104 Ga0500556_0000343 Ga0500556_0000343_17902_19800 610
36 3300053117 Ga0500593_013988 Ga0500593_013988_622_2520 610
37 3300053133 Ga0500655_002422 Ga0500655_002422_164_2062 610
38 3300044673 Ga0453683_0020615 Ga0453683_0020615_202_2106 612
39 3300044673 Ga0453683_0034876 Ga0453683_0034876_577_2481 612
40 3300053139 Ga0500568_0000393 Ga0500568_0000393_19189_21039 612
41 3300053140 Ga0500573_0000519 Ga0500573_0000519_7737_9581 612
42 3300005471 Ga0070698_100112035 Ga0070698_1001120352 613
43 3300025910 Ga0207684_10074080 Ga0207684_100740803 613
44 3300005338 Ga0068868_100000063 Ga0068868_10000006327 615
45 3300005339 Ga0070660_100002173 Ga0070660_1000021737 615
46 3300005366 Ga0070659_100000034 Ga0070659_10000003465 615
47 3300021384 Ga0213876_10003637 Ga0213876_100036375 615
48 3300025919 Ga0207657_10005363 Ga0207657_100053637 615
49 3300025932 Ga0207690_10000005 Ga0207690_10000005272 615
50 3300026023 Ga0207677_10000044 Ga0207677_1000004492 615
51 3300039437 Ga0436365_1219478 Ga0436365_1219478_4200_6101 615
52 3300005578 Ga0068854_100006327 Ga0068854_1000063273 616
53 3300005614 Ga0068856_100030313 Ga0068856_1000303133 616
54 3300013307 Ga0157372_10084905 Ga0157372_100849053 616
55 3300026142 Ga0207698_10012509 Ga0207698_100125093 616
56 3300049571 Ga0501034_0049875 Ga0501034_0049875_1398_3317 616
57 iso_pu_bacteria 2857737099 2857738072 616
58 3300028577 Ga0265318_10003045 Ga0265318_100030453 617
59 3300031711 Ga0265314_10027626 Ga0265314_100276265 617
60 3300045051 Ga0451576_0000152 Ga0451576_0000152_76585_78492 618
61 iso_pu_bacteria 2870622029 2870623957 619
62 3300044712 Ga0453684_0000894 Ga0453684_0000894_39673_41535 620
63 3300054114 Ga0501084_0007816 Ga0501084_0007816_520_2418 620
64 3300003762 Ga0055542_1000740 Ga0055542_10007401 621
65 3300005327 Ga0070658_10033794 Ga0070658_100337944 621
66 3300005339 Ga0070660_100007085 Ga0070660_1000070859 621
67 3300005543 Ga0070672_100092253 Ga0070672_1000922532 621
68 3300005548 Ga0070665_100045802 Ga0070665_1000458022 621
69 3300005548 Ga0070665_100066443 Ga0070665_1000664433 621
70 3300009093 Ga0105240_10062463 Ga0105240_100624634 621
71 3300009174 Ga0105241_10028597 Ga0105241_100285972 621
72 3300025254 Ga0209148_1000050 Ga0209148_100005061 621
73 3300025272 Ga0209455_1000379 Ga0209455_10003792 621
74 3300025919 Ga0207657_10024470 Ga0207657_100244702 621
75 3300025940 Ga0207691_10113964 Ga0207691_101139641 621
76 3300026067 Ga0207678_10072985 Ga0207678_100729852 621
77 3300026078 Ga0207702_10133249 Ga0207702_101332492 621
78 3300048923 Ga0496120_0018676 Ga0496120_0018676_1757_3658 621
79 3300050492 nmdc:mga0yw44_2757_c1 nmdc:mga0yw44_2757_c1_3060_4961 621
80 3300007076 Ga0075435_100007387 Ga0075435_1000073873 622
81 3300050513 nmdc:mga0rr50_6076_c1 nmdc:mga0rr50_6076_c1_3195_5102 622
82 3300053136 Ga0500559_0000541 Ga0500559_0000541_15787_17670 622
83 3300053140 Ga0500573_0052949 Ga0500573_0052949_244_2127 622
84 3300053142 Ga0500577_0000158 Ga0500577_0000158_2101_3984 622
85 3300041491 Ga0451833_0674742 Ga0451833_0674742_1178_3076 623
86 3300041492 Ga0451835_0091956 Ga0451835_0091956_826_2724 623
87 3300041496 Ga0451839_0205920 Ga0451839_0205920_252_2150 623
88 3300041498 Ga0451841_0754316 Ga0451841_0754316_203_2101 623
89 3300041501 Ga0451845_0130359 Ga0451845_0130359_2649_4547 623
90 3300041503 Ga0451847_0072406 Ga0451847_0072406_1074_2972 623
91 3300041505 Ga0451849_0845786 Ga0451849_0845786_1318_3216 623
92 3300041507 Ga0451851_0313650 Ga0451851_0313650_808_2706 623
93 3300041511 Ga0451855_1280980 Ga0451855_1280980_164_2062 623
94 3300046518 Ga0495631_0032217 Ga0495631_0032217_315_2213 623
95 3300046692 Ga0495671_0032433 Ga0495671_0032433_23_1921 623
96 iso_pu_bacteria 2643221674 2644412727 623
97 3300049592 Ga0501076_0013060 Ga0501076_0013060_1193_3094 624
98 3300049741 Ga0501079_0031490 Ga0501079_0031490_1222_3123 624
99 3300054114 Ga0501084_0015574 Ga0501084_0015574_2267_4168 624
100 3300061734 Ga0530510_0049338 Ga0530510_0049338_396_2297 624
101 3300028794 Ga0307515_10000112 Ga0307515_1000011275 625
102 3300046460 Ga0495638_0025685 Ga0495638_0025685_1181_3067 625
103 3300048929 Ga0496126_0011268 Ga0496126_0011268_1421_3325 625
104 3300053151 Ga0500604_0000174 Ga0500604_0000174_6760_8676 625
105 3300031733 Ga0316577_10011534 Ga0316577_100115341 626
106 3300045051 Ga0451576_0002941 Ga0451576_0002941_11206_13113 626
107 iso_pu_bacteria 2510461076 2510895251 626
108 iso_pu_bacteria 2513237162 2514020130 626
109 iso_pu_bacteria 2515154113 2515636445 626
110 iso_pu_bacteria 2515154114 2515640838 626
111 iso_pu_bacteria 2515154116 2515655478 626
112 iso_pu_bacteria 2582581298 2585222712 626
113 iso_pu_bacteria 2585427529 2585545295 626
114 iso_pu_bacteria 2989349275 2989354940 626
115 iso_pu_bacteria 2510461069 2510840061 627
116 iso_pu_bacteria 2512875016 2512931004 627
117 iso_pu_bacteria 2512875024 2512958734 627
118 iso_pu_bacteria 2513237164 2514034851 627
119 iso_pu_bacteria 2582581306 2585267548 627
120 iso_pu_bacteria 2582581865 2585386611 627
121 iso_pu_bacteria 2585427633 2585996102 627
122 iso_pu_bacteria 2585427634 2586000717 627
123 iso_pu_bacteria 2588253730 2588516691 627
124 iso_pu_bacteria 2643221607 2644050622 627
125 iso_pu_bacteria 2643221636 2644205096 627
126 iso_pu_bacteria 2643221637 2644210116 627
127 iso_pu_bacteria 2643221653 2644296693 627
128 iso_pu_bacteria 2643221686 2644483540 627
129 iso_pu_bacteria 2643221688 2644491876 627
130 iso_pu_bacteria 2643221689 2644501460 627
131 iso_pu_bacteria 2643221718 2644653668 627
132 iso_pu_bacteria 2643221719 2644654947 627
133 iso_pu_bacteria 2775507049 2776913833 627
134 iso_pu_bacteria 2818991272 2819242389 627
135 iso_pu_bacteria 2842922631 2842926285 627
136 iso_pu_bacteria 2844002411 2844006309 627
137 iso_pu_bacteria 2854896431 2854899437 627
138 iso_pu_bacteria 2854916844 2854918048 627
139 iso_pu_bacteria 2871466892 2871470877 627
140 iso_pu_bacteria 2876363079 2876365845 627
141 iso_pu_bacteria 2899803654 2899807374 627
142 iso_pu_bacteria 2903448605 2903455533 627
143 iso_pu_bacteria 2903521522 2903523831 627
144 iso_pu_bacteria 2903528002 2903534308 627
145 iso_pu_bacteria 2906378014 2906384057 627
146 iso_pu_bacteria 2919171160 2919174801 627
147 iso_pu_bacteria 2937848649 2937854987 627
148 iso_pu_bacteria 2963644680 2963648220 627
149 iso_pu_bacteria 2968083720 2968091043 627
150 iso_pu_bacteria 2977922695 2977929342 627
151 iso_pu_bacteria 2977986579 2977987490 627
152 iso_pu_bacteria 2989776772 2989778330 627
153 iso_pu_bacteria 3000135777 3000140092 627
154 iso_pu_bacteria 3004211236 3004211800 627
155 iso_pu_bacteria 3004218560 3004219047 627
156 iso_pu_bacteria 3004334049 3004341154 627
157 iso_pu_bacteria 637000159 637074045 627
158 iso_pu_bacteria 8005246636 8005251167 627
159 3300044712 Ga0453684_0004484 Ga0453684_0004484_23126_25075 628
160 3300053140 Ga0500573_0052402 Ga0500573_0052402_331_2313 628
161 iso_pu_bacteria 2643221574 2643884655 628
162 iso_pu_bacteria 2643221699 2644550815 628
163 3300002741 JGI25157J39369_1001549 JGI25157J39369_10015496 629
164 3300003781 Ga0055536_1003423 Ga0055536_10034238 629
165 3300003790 Ga0055528_1000331 Ga0055528_100033117 629
166 3300003792 Ga0055540_1011614 Ga0055540_10116141 629
167 3300003794 Ga0055531_10001006 Ga0055531_1000100612 629
168 3300005262 Ga0065165_1003448 Ga0065165_10034483 629
169 3300005327 Ga0070658_10002302 Ga0070658_100023023 629
170 3300005327 Ga0070658_10045574 Ga0070658_100455741 629
171 3300005329 Ga0070683_100034123 Ga0070683_1000341232 629
172 3300005335 Ga0070666_10035549 Ga0070666_100355493 629
173 3300005344 Ga0070661_100004586 Ga0070661_1000045866 629
174 3300005548 Ga0070665_100005704 Ga0070665_10000570410 629
175 3300005563 Ga0068855_100033521 Ga0068855_1000335213 629
176 3300005614 Ga0068856_100046114 Ga0068856_1000461143 629
177 3300005616 Ga0068852_100004555 Ga0068852_10000455510 629
178 3300006038 Ga0075365_10044877 Ga0075365_100448772 629
179 3300006048 Ga0075363_100002377 Ga0075363_1000023775 629
180 3300006177 Ga0075362_10004598 Ga0075362_100045982 629
181 3300006178 Ga0075367_10018915 Ga0075367_100189153 629
182 3300006178 Ga0075367_10072536 Ga0075367_100725361 629
183 3300009093 Ga0105240_10090678 Ga0105240_100906782 629
184 3300010375 Ga0105239_10045245 Ga0105239_100452455 629
185 3300013104 Ga0157370_10035806 Ga0157370_100358064 629
186 3300025250 Ga0209026_1000024 Ga0209026_1000024302 629
187 3300025256 Ga0209759_1000302 Ga0209759_100030224 629
188 3300025273 Ga0209673_1000384 Ga0209673_100038429 629
189 3300025295 Ga0209564_1000388 Ga0209564_100038829 629
190 3300025297 Ga0209758_1001465 Ga0209758_100146519 629
191 3300025298 Ga0209050_1002400 Ga0209050_100240018 629
192 3300025299 Ga0209256_1000738 Ga0209256_10007384 629
193 3300025303 Ga0209051_1007593 Ga0209051_10075932 629
194 3300025304 Ga0209257_1003279 Ga0209257_100327910 629
195 3300025903 Ga0207680_10005343 Ga0207680_100053432 629
196 3300025909 Ga0207705_10035462 Ga0207705_100354622 629
197 3300025925 Ga0207650_10025408 Ga0207650_100254081 629
198 3300025949 Ga0207667_10005887 Ga0207667_100058879 629
199 3300028794 Ga0307515_10000788 Ga0307515_100007883 629
200 3300028794 Ga0307515_10113219 Ga0307515_101132192 629
201 3300035695 Ga0373927_0000386 Ga0373927_0000386_5580_7481 629
202 3300037068 Ga0373925_0007724 Ga0373925_0007724_3134_5035 629
203 3300037471 Ga0395905_0000510 Ga0395905_0000510_38699_40597 629
204 3300037471 Ga0395905_0005116 Ga0395905_0005116_6430_8328 629
205 3300037471 Ga0395905_0039623 Ga0395905_0039623_2097_3995 629
206 3300039437 Ga0436365_0157873 Ga0436365_0157873_280_2181 629
207 3300041509 Ga0451843_0495660 Ga0451843_0495660_179_2077 629
208 3300044712 Ga0453684_0014587 Ga0453684_0014587_6435_8339 629
209 3300046492 Ga0495585_0038700 Ga0495585_0038700_202_2100 629
210 3300046558 Ga0495633_0027942 Ga0495633_0027942_454_2352 629
211 3300046615 Ga0495656_0033815 Ga0495656_0033815_142_2040 629
212 3300046691 Ga0495670_0017782 Ga0495670_0017782_846_2744 629
213 3300048921 Ga0496118_0007156 Ga0496118_0007156_7862_9760 629
214 3300048924 Ga0496121_0074500 Ga0496121_0074500_532_2433 629
215 3300048924 Ga0496121_0095991 Ga0496121_0095991_107_2065 629
216 3300048925 Ga0496122_0000369 Ga0496122_0000369_16217_18118 629
217 3300048926 Ga0496123_0000054 Ga0496123_0000054_74533_76434 629
218 3300048927 Ga0496124_0017762 Ga0496124_0017762_4015_5916 629
219 3300053153 Ga0500616_0000400 Ga0500616_0000400_51497_53398 629
220 3300053156 Ga0500622_0001031 Ga0500622_0001031_15614_17512 629
221 iso_pu_bacteria 2503198000 2503202100 629
222 iso_pu_bacteria 2582581283 2585166242 629
223 iso_pu_bacteria 2582581866 2585393156 629
224 iso_pu_bacteria 2599185156 2599335094 629
225 iso_pu_bacteria 2756170246 2756677269 629
226 iso_pu_bacteria 3004167301 3004169451 629
227 3300044673 Ga0453683_0075911 Ga0453683_0075911_102_2000 630
228 3300044712 Ga0453684_0001019 Ga0453684_0001019_23536_25449 630
229 3300044712 Ga0453684_0001056 Ga0453684_0001056_78978_80891 630
230 3300044712 Ga0453684_0007770 Ga0453684_0007770_1453_3381 630
231 3300046460 Ga0495638_0000195 Ga0495638_0000195_12555_14459 630
232 3300046474 Ga0495605_0000779 Ga0495605_0000779_12365_14269 630
233 3300046492 Ga0495585_0020136 Ga0495585_0020136_911_2815 630
234 3300046513 Ga0495616_0017695 Ga0495616_0017695_2003_3907 630
235 3300046518 Ga0495631_0001355 Ga0495631_0001355_12442_14346 630
236 3300046616 Ga0495668_0021588 Ga0495668_0021588_968_2872 630
237 3300046660 Ga0495625_0000621 Ga0495625_0000621_17705_19609 630
238 3300047320 Ga0495672_0019582 Ga0495672_0019582_2273_4177 630
239 3300049459 Ga0495678_008381 Ga0495678_008381_194_2098 630
240 3300053105 Ga0500557_005949 Ga0500557_005949_466_2370 630
241 3300053109 Ga0500569_001696 Ga0500569_001696_518_2422 630
242 3300053118 Ga0500594_0004145 Ga0500594_0004145_341_2245 630
243 3300053153 Ga0500616_0002450 Ga0500616_0002450_9603_11507 630
244 3300006844 Ga0075428_100018332 Ga0075428_1000183327 631
245 3300006880 Ga0075429_100003152 Ga0075429_1000031522 631
246 3300009147 Ga0114129_10027088 Ga0114129_100270888 631
247 3300050507 nmdc:mga05p37_4824_c1 nmdc:mga05p37_4824_c1_6919_8817 631
248 3300050508 nmdc:mga09592_7128_c1 nmdc:mga09592_7128_c1_168_2066 631
249 3300005518 Ga0070699_100082769 Ga0070699_1000827692 632
250 3300006194 Ga0075427_10002854 Ga0075427_100028542 632
251 3300006847 Ga0075431_100102427 Ga0075431_1001024272 632
252 3300031903 Ga0307407_10018880 Ga0307407_100188801 632
253 3300050507 nmdc:mga05p37_74893_c1 nmdc:mga05p37_74893_c1_1409_3307 632
254 3300050508 nmdc:mga09592_39352_c1 nmdc:mga09592_39352_c1_886_2784 632
255 3300005289 Ga0065704_10003914 Ga0065704_100039142 633
256 3300005444 Ga0070694_100033093 Ga0070694_1000330932 633
257 3300005471 Ga0070698_100029703 Ga0070698_1000297035 633
258 3300005518 Ga0070699_100022460 Ga0070699_1000224602 633
259 3300005545 Ga0070695_100003401 Ga0070695_1000034013 633
260 3300005546 Ga0070696_100010901 Ga0070696_1000109012 633
261 3300005549 Ga0070704_100003497 Ga0070704_1000034975 633
262 3300005617 Ga0068859_100015303 Ga0068859_1000153033 633
263 3300005985 Ga0081539_10006942 Ga0081539_100069425 633
264 3300006880 Ga0075429_100009638 Ga0075429_1000096382 633
265 3300006931 Ga0097620_100015303 Ga0097620_1000153033 633
266 3300009147 Ga0114129_10011230 Ga0114129_100112305 633
267 3300009147 Ga0114129_10035512 Ga0114129_100355122 633
268 3300009553 Ga0105249_10040511 Ga0105249_100405114 633
269 3300025961 Ga0207712_10037213 Ga0207712_100372132 633
270 3300028380 Ga0268265_10093236 Ga0268265_100932361 633
271 3300044712 Ga0453684_0022171 Ga0453684_0022171_2040_3941 633
272 3300044712 Ga0453684_0055038 Ga0453684_0055038_490_2391 633
273 3300044712 Ga0453684_0114205 Ga0453684_0114205_1073_2974 633
274 3300044712 Ga0453684_0177594 Ga0453684_0177594_79_1983 633
275 3300049742 Ga0501080_0036875 Ga0501080_0036875_636_2540 633
276 3300050507 nmdc:mga05p37_1733_c1 nmdc:mga05p37_1733_c1_13700_15601 633
277 3300050507 nmdc:mga05p37_630_c1 nmdc:mga05p37_630_c1_5651_7555 633
278 3300050508 nmdc:mga09592_5958_c1 nmdc:mga09592_5958_c1_3567_5471 633
279 2162886007 SwRhRL2b_contig_121814 SwRhRL2b_0906.00004320 639
280 2162886007 SwRhRL2b_contig_704022 SwRhRL2b_0120.00006150 639
281 3300005289 Ga0065704_10070229 Ga0065704_1007022930 639
282 3300005295 Ga0065707_10081970 Ga0065707_1008197022 639

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06241

Castor_Poll_mid

Castor and Pollux, part of voltage-gated ion channel

344

446

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vm8-assembly1.cif.gz_A crystal structure of the mtdmi1 gating ring 0.9024 128 639
7vm8-assembly1.cif.gz_A crystal structure of the mtdmi1 gating ring 0.899 128 639
6o7c-assembly1.cif.gz_A crystal structure of the ljcastor gating ring in the ca2+ and k+ state 0.8967 128 639
6o7c-assembly1.cif.gz_A crystal structure of the ljcastor gating ring in the ca2+ and k+ state 0.8917 128 639
6o7a-assembly1.cif.gz_D crystal structure of the ljcastor gating ring in the ca2+-free state 0.889 128 639
ID Description Score Start End Superfamily
af_Q9LTX4_434_536_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.9372 272 366 3.30.70.1450
af_Q5N941_412_573_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9304 129 290 3.40.50.720
af_Q9LTX4_283_428_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9302 119 260 3.40.50.720
af_Q5N941_412_573_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9195 129 290 3.40.50.720
af_A0A1D6JPH1_795_900_3.30.70.1450 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Regulator of K+ conductance, C-terminal domain 0.9038 537 639 3.30.70.1450
ID Description Score Start End GO Terms
AF-A0A4Q5PXX4-F1-model_v4 Potassium transporter TrkA 0.9686 207 639 GO:0006813
GO:0016020
AF-A0A3N5T676-F1-model_v4 Potassium transporter TrkA 0.9637 284 639 GO:0006813
GO:0008324
GO:0016020
AF-A0A383EIC9-F1-model_v4 Uncharacterized protein 0.9633 560 639
AF-A0A661ZE97-F1-model_v4 Potassium transporter TrkA 0.9622 538 639 GO:0006811
AF-A0A3N5T676-F1-model_v4 Potassium transporter TrkA 0.961 284 639 GO:0006813
GO:0008324
GO:0016020

Feature Viewer

pLDDT pTM Quality
81.66 0.75 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map