F385271

General Info

Members Datasets Scaffolds Average Seq Length
282 224 564 202

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2842363717|2842369044
Length 229
Sequence HDHDHDHHDHAHGHDHDNHYSDMQARVKALETLLTEKGLIDPAAIDAIVETYETKVGPRNGAHVVAKAWSDADFAAWLKRDATAAIASLGFTGRQGEHMRAVFNTPETHNLIVCTLCSCYPWSVLGLPPVWYKAPAYRSRAVIDPRGVLAEFGLTLPKEKKIRVWDSTAELRYLVIPERPDGTDGMDEAALAGLVSRDAMIGTAIAGSWKVSAAGSSKISAAGSPEALP

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
7 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
8 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
9 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
14 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
17 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
18 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
25 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
26 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
45 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
46 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
47 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
48 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
49 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
50 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
51 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
53 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
54 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
55 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
79 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
80 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
83 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
84 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
87 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
88 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
89 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
90 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
91 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
94 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
95 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
96 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
99 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
100 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
103 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
104 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
105 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
106 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
107 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
114 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
115 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
116 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
124 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
127 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
148 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
149 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
150 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
155 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
156 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
157 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
158 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
159 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
160 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
161 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
162 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
163 2519899620 Rhizobium sp. Pop5 Isolate Nodule
164 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
165 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
166 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
167 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
168 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
169 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
170 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
171 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
172 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
173 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
174 2643221558 Rhizobium sp. Root149 Isolate Unclassified
175 2643221607 Rhizobium sp. Root73 Isolate Unclassified
176 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
177 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
178 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
179 2643221668 Ensifer sp. Root423 Isolate Unclassified
180 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
181 2643221688 Rhizobium sp. Root482 Isolate Unclassified
182 2643221718 Rhizobium sp. Root268 Isolate Unclassified
183 2643221719 Rhizobium sp. Root274 Isolate Unclassified
184 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
185 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
186 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
187 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
188 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
189 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
190 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
191 2791355261 Rhizobium sp. J15 Isolate Nodule
192 2791355263 Rhizobium chutanense C5 Isolate Nodule
193 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
194 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
195 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
196 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
197 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
198 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
199 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
200 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
201 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
202 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
203 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
204 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
205 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
206 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
207 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
208 2936381700 Rhizobium chutanense C16 Isolate Unclassified
209 2996893221 Rhizobium sp. R635 Isolate Nodule
210 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
211 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
212 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
213 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
214 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
215 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
216 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
217 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
218 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
219 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
220 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
221 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule
222 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
223 8054558443 Rhizobium alarense TRM95111 Isolate Nodule
224 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 73.76
Metatranscriptomes 0.71
Isolates 25.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 26.24
Nodule 14.18
Rhizoplane 1.42
Rhizosphere 34.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10022870 3300001979 Bacteria 2144
2 JGI25155J39150_1000001 3300002704 Bacteria 354543
3 JGI25156J39149_1000001 3300002705 Bacteria 354557
4 JGI25162J39368_1000380 3300002737 Bacteria 37780
5 JGI25154J39366_1000011 3300002738 Bacteria 296007
6 JGI25158J39367_1000129 3300002739 Bacteria 17721
7 JGI25157J39369_1000079 3300002741 Bacteria 86111
8 JGI25152J39213_1004611 3300002773 Bacteria 4285
9 JGI25152J39213_1010835 3300002773 Bacteria 2057
10 JGI25159J45721_1000613 3300002987 Bacteria 15891
11 JGI25159J45721_1001660 3300002987 Bacteria 9022
12 JGI25165J46597_1000422 3300003214 Bacteria 43957
13 JGI25153J46596_10003058 3300003215 Bacteria 9445
14 JGI25153J46596_10009561 3300003215 Bacteria 4484
15 JGI25153J46596_10011070 3300003215 Bacteria 4018
16 JGI25160J50197_1000001 3300003354 Bacteria 782301
17 JGI25160J50197_1008873 3300003354 Bacteria 3784
18 JGI25161J50226_1000001 3300003374 Bacteria 655036
19 JGI25161J50226_1000099 3300003374 Bacteria 70186
20 JGI25161J50226_1000140 3300003374 Bacteria 50175
21 Ga0006562J51391_1036025 3300003578 Bacteria 1556
22 Ga0055526_1005523 3300003771 Bacteria 7236
23 Ga0055524_1002368 3300003775 Bacteria 9799
24 Ga0055536_1009417 3300003781 Bacteria 4039
25 Ga0055528_1003598 3300003790 Bacteria 7716
26 Ga0055530_10018535 3300003791 Bacteria 2142
27 Ga0055530_10029275 3300003791 Bacteria 1474
28 Ga0055540_1001971 3300003792 Bacteria 11472
29 Ga0055540_1008899 3300003792 Bacteria 3547
30 Ga0055531_10004084 3300003794 Bacteria 9041
31 Ga0055531_10010659 3300003794 Bacteria 4539
32 Ga0055543_1000003 3300004625 Bacteria 358656
33 Ga0055543_1000128 3300004625 Bacteria 63029
34 Ga0065165_1000068 3300005262 Bacteria 170609
35 Ga0065165_1003952 3300005262 Bacteria 9730
36 Ga0065165_1017816 3300005262 Bacteria 2600
37 Ga0065165_1018622 3300005262 Bacteria 2506
38 Ga0070676_10323987 3300005328 Bacteria 1052
39 Ga0070669_100017900 3300005353 Bacteria 5059
40 Ga0070671_100043123 3300005355 Bacteria 3750
41 Ga0070674_100102228 3300005356 Bacteria 2090
42 Ga0070673_100636683 3300005364 Bacteria 975
43 Ga0070667_100648567 3300005367 Bacteria 975
44 Ga0070700_100377504 3300005441 Bacteria 1059
45 Ga0070665_100181663 3300005548 Bacteria 2105
46 Ga0070665_100182685 3300005548 Bacteria 2098
47 Ga0068856_100025945 3300005614 Bacteria 5715
48 Ga0068862_100010663 3300005844 Bacteria 7592
49 Ga0068862_100318333 3300005844 Bacteria 1435
50 Ga0075369_10014179 3300006186 Bacteria 3180
51 Ga0075370_10103814 3300006353 Bacteria 1647
52 Ga0075428_100107175 3300006844 Bacteria 3046
53 Ga0068865_100180091 3300006881 Bacteria 1627
54 Ga0099794_10139875 3300007265 Bacteria 1226
55 Ga0105250_10107133 3300009092 Bacteria 1143
56 Ga0114129_10326183 3300009147 Bacteria 2040
57 Ga0123341_1000032 3300009765 Bacteria 62527
58 Ga0105239_10041426 3300010375 Bacteria 5047
59 Ga0157380_10166976 3300014326 Bacteria 1919
60 Ga0213874_10078308 3300021377 Bacteria 1067
61 Ga0209435_100012 3300025206 Bacteria 401621
62 Ga0209436_100029 3300025208 Bacteria 85964
63 Ga0209437_100047 3300025233 Bacteria 405163
64 Ga0207425_1006673 3300025245 Bacteria 3131
65 Ga0207425_1017064 3300025245 Bacteria 1602
66 Ga0209646_1000026 3300025246 Bacteria 401621
67 Ga0209026_1000014 3300025250 Bacteria 401621
68 Ga0209148_1022731 3300025254 Bacteria 1004
69 Ga0209759_1000012 3300025256 Bacteria 401621
70 Ga0209129_1000384 3300025258 Bacteria 35556
71 Ga0209129_1002877 3300025258 Bacteria 7934
72 Ga0209129_1005114 3300025258 Bacteria 4803
73 Ga0209129_1005300 3300025258 Bacteria 4632
74 Ga0209233_1000048 3300025261 Bacteria 453669
75 Ga0209130_1000003 3300025284 Bacteria 677988
76 Ga0209130_1000020 3300025284 Bacteria 379297
77 Ga0209130_1027339 3300025284 Bacteria 1213
78 Ga0209025_1009763 3300025294 Bacteria 6626
79 Ga0209025_1137729 3300025294 Bacteria 697
80 Ga0209564_1000512 3300025295 Bacteria 63708
81 Ga0209564_1020061 3300025295 Bacteria 2468
82 Ga0209758_1000642 3300025297 Bacteria 53219
83 Ga0209758_1002951 3300025297 Bacteria 16327
84 Ga0209758_1003364 3300025297 Bacteria 14653
85 Ga0209758_1012299 3300025297 Bacteria 4804
86 Ga0209758_1070393 3300025297 Bacteria 1104
87 Ga0209050_1012937 3300025298 Bacteria 3772
88 Ga0209256_1000442 3300025299 Bacteria 63395
89 Ga0209256_1009553 3300025299 Bacteria 4229
90 Ga0207426_1000008 3300025302 Bacteria 848730
91 Ga0207426_1000011 3300025302 Bacteria 791203
92 Ga0209051_1002410 3300025303 Bacteria 13449
93 Ga0209051_1007466 3300025303 Bacteria 5969
94 Ga0209257_1003491 3300025304 Bacteria 13392
95 Ga0209257_1024872 3300025304 Bacteria 2060
96 Ga0207692_10068387 3300025898 Bacteria 1862
97 Ga0207681_10056866 3300025923 Bacteria 2670
98 Ga0207659_10051374 3300025926 Bacteria 2932
99 Ga0207644_10062668 3300025931 Bacteria 2698
100 Ga0207706_10925155 3300025933 Bacteria 736
101 Ga0207704_10043698 3300025938 Bacteria 2648
102 Ga0207651_10974127 3300025960 Bacteria 757
103 Ga0207702_10018061 3300026078 Bacteria 5835
104 Ga0207675_100138466 3300026118 Bacteria 2311
105 Ga0209371_1007288 3300027312 Bacteria 3884
106 Ga0207428_10000078 3300027907 Bacteria 136571
107 Ga0268266_10414228 3300028379 Bacteria 1276
108 Ga0268265_10404801 3300028380 Bacteria 1262
109 Ga0307515_10000556 3300028794 Bacteria 88174
110 Ga0307515_10000788 3300028794 Bacteria 72975
111 Ga0307515_10017597 3300028794 Bacteria 13001
112 Ga0307515_10288417 3300028794 Bacteria 1340
113 Ga0268256_1007489 3300030500 Bacteria 3884
114 Ga0307513_10025659 3300031456 Bacteria 6820
115 Ga0307516_10396950 3300031730 Bacteria 1039
116 Ga0307412_10260797 3300031911 Bacteria 1351
117 Ga0316596_1037649 3300033541 Bacteria 1266
118 Ga0373936_0022344 3300035113 Bacteria 2463
119 Ga0395905_0001960 3300037471 Bacteria 23549
120 Ga0436364_1477734 3300037853 Bacteria 704
121 Ga0439465_0001082 3300041413 Bacteria 8718
122 Ga0439465_0114580 3300041413 Bacteria 941
123 Ga0439432_009604 3300042006 Bacteria 3372
124 Ga0439458_0033371 3300042157 Bacteria 1233
125 Ga0439435_0000576 3300042436 Bacteria 5939
126 Ga0439459_0150651 3300042438 Bacteria 608
127 Ga0466972_0243680 3300044658 Bacteria 841
128 Ga0466963_0006812 3300044694 Bacteria 6796
129 Ga0466970_0011908 3300044765 Bacteria 4438
130 Ga0466958_0009384 3300045836 Bacteria 5453
131 Ga0495617_013469 3300046452 Bacteria 2784
132 Ga0495629_0034354 3300046459 Bacteria 3585
133 Ga0495638_0000195 3300046460 Bacteria 88030
134 Ga0495605_0007566 3300046474 Bacteria 6160
135 Ga0495585_0006794 3300046492 Bacteria 7061
136 Ga0495583_0057505 3300046506 Bacteria 1749
137 Ga0495606_0002164 3300046507 Bacteria 23646
138 Ga0495610_0011895 3300046512 Bacteria 5282
139 Ga0495616_0241836 3300046513 Bacteria 778
140 Ga0495620_0117510 3300046515 Bacteria 1050
141 Ga0495631_0001628 3300046518 Bacteria 13398
142 Ga0495632_0034615 3300046519 Bacteria 2583
143 Ga0495643_0078291 3300046522 Bacteria 1726
144 Ga0495587_0238127 3300046536 Bacteria 1024
145 Ga0495668_0013421 3300046616 Bacteria 4832
146 Ga0495634_0243220 3300046642 Bacteria 1103
147 Ga0495611_0009701 3300046648 Bacteria 4069
148 Ga0495625_0000621 3300046660 Bacteria 51568
149 Ga0495625_0299579 3300046660 Bacteria 1029
150 Ga0495657_0020297 3300046675 Bacteria 4779
151 Ga0495658_0110688 3300046683 Bacteria 1651
152 Ga0495624_0114715 3300046690 Bacteria 1656
153 Ga0495671_0149582 3300046692 Bacteria 1137
154 Ga0495600_0119365 3300046809 Bacteria 1715
155 Ga0495660_0021318 3300046810 Bacteria 3711
156 Ga0495604_0043252 3300047317 Bacteria 3527
157 Ga0495672_0005251 3300047320 Bacteria 10318
158 Ga0495683_0080059 3300047323 Bacteria 1595
159 Ga0496102_0669025 3300048905 Bacteria 961
160 Ga0496106_0000578 3300048909 Bacteria 26182
161 Ga0496116_0007744 3300048919 Bacteria 9449
162 Ga0496116_0021014 3300048919 Bacteria 4936
163 Ga0496116_0025850 3300048919 Bacteria 4306
164 Ga0496117_0220580 3300048920 Bacteria 1056
165 Ga0496118_0200631 3300048921 Bacteria 1182
166 Ga0496119_0019449 3300048922 Bacteria 5001
167 Ga0496121_0005561 3300048924 Bacteria 16097
168 Ga0496121_0061579 3300048924 Bacteria 3078
169 Ga0496121_0103821 3300048924 Bacteria 2186
170 Ga0496121_0439731 3300048924 Bacteria 843
171 Ga0496122_0002690 3300048925 Bacteria 24724
172 Ga0496122_0035177 3300048925 Bacteria 4083
173 Ga0496122_0043776 3300048925 Bacteria 3503
174 Ga0496122_0126436 3300048925 Bacteria 1635
175 Ga0496122_0138231 3300048925 Bacteria 1530
176 Ga0496123_0000054 3300048926 Bacteria 234046
177 Ga0496123_0033667 3300048926 Bacteria 3683
178 Ga0496123_0117255 3300048926 Bacteria 1506
179 Ga0496123_0205694 3300048926 Bacteria 1005
180 Ga0496124_0046133 3300048927 Bacteria 3733
181 Ga0496124_0197117 3300048927 Bacteria 1535
182 Ga0496124_0280921 3300048927 Bacteria 1214
183 Ga0496125_0066189 3300048928 Bacteria 2857
184 Ga0496125_0085645 3300048928 Bacteria 2387
185 Ga0496125_0286705 3300048928 Bacteria 1016
186 Ga0496126_0044422 3300048929 Bacteria 4092
187 Ga0501032_0045264 3300049569 Bacteria 2977
188 Ga0501033_0041206 3300049570 Bacteria 3446
189 Ga0501033_0455292 3300049570 Bacteria 888
190 Ga0501034_0000538 3300049571 Bacteria 60200
191 Ga0501034_0071468 3300049571 Bacteria 3480
192 Ga0501034_0207431 3300049571 Bacteria 1915
193 Ga0501038_0104965 3300049574 Bacteria 2348
194 Ga0501043_0482239 3300049579 Bacteria 928
195 Ga0501047_0242878 3300049581 Bacteria 1651
196 Ga0501035_0290308 3300049822 Bacteria 1380
197 Ga0501044_0244253 3300049823 Bacteria 1738
198 Ga0501044_0673945 3300049823 Bacteria 921
199 nmdc:mga0yw44_399776_c1 3300050492 Bacteria 929
200 nmdc:mga08y16_66_c1 3300050511 Bacteria 87732
201 Ga0500610_0034789 3300053079 Bacteria 2580
202 Ga0495619_0267049 3300053085 Bacteria 1186
203 Ga0500643_023448 3300053087 Bacteria 1971
204 Ga0500654_080632 3300053099 Bacteria 1519
205 Ga0500557_003926 3300053105 Bacteria 3039
206 Ga0500594_0002292 3300053118 Bacteria 4149
207 Ga0500559_0122944 3300053136 Bacteria 1208
208 Ga0500568_0005767 3300053139 Bacteria 6338
209 Ga0500573_0000585 3300053140 Bacteria 16001
210 Ga0500616_0045814 3300053153 Bacteria 2328
211 2842369044 2842363717 Bacteria 6844742
212 2509392136 2509276021 Bacteria 7634384
213 2509445781 2509276033 Bacteria 7180565
214 2509446917 2509276033 Bacteria 7180565
215 2510133875 2510065019 Bacteria 6903379
216 2511135314 2510917022 Bacteria 6504556
217 2512533543 2512047086 Bacteria 6850303
218 2513909189 2513237144 Bacteria 7530820
219 2513996875 2513237159 Bacteria 6810126
220 2517407319 2517287029 Bacteria 6905599
221 2520381430 2519899620 Bacteria 6499161
222 2530646033 2529292951 Bacteria 6916614
223 2585267514 2582581306 Bacteria 6450535
224 2585271051 2582581307 Bacteria 6597605
225 2585386576 2582581865 Bacteria 6644329
226 2585558775 2585427531 Bacteria 6992870
227 2585898172 2585427608 Bacteria 6544331
228 2585904255 2585427609 Bacteria 6667127
229 2585996123 2585427633 Bacteria 6413184
230 2587980628 2585428125 Bacteria 6662905
231 2600374419 2600254933 Bacteria 4750527
232 2643811588 2643221558 Bacteria 5460675
233 2644050592 2643221607 Bacteria 6314006
234 2644205066 2643221636 Bacteria 6583769
235 2644210094 2643221637 Bacteria 5345260
236 2644298597 2643221653 Bacteria 4569637
237 2644374837 2643221668 Bacteria 7306521
238 2644483510 2643221686 Bacteria 6310811
239 2644491967 2643221688 Bacteria 5260751
240 2644653646 2643221718 Bacteria 5345506
241 2644656826 2643221719 Bacteria 4568197
242 2671111510 2667528174 Bacteria 6435400
243 2724110677 2721755823 Bacteria 6752556
244 2725952640 2724679232 Bacteria 7646494
245 2738948862 2738541317 Bacteria 5340176
246 2778175342 2775507266 Bacteria 7392367
247 2792585200 2791355082 Bacteria 5973319
248 2793314617 2791355259 Bacteria 7254731
249 2793330518 2791355261 Bacteria 6661293
250 2793339123 2791355263 Bacteria 6872478
251 2838028395 2838022645 Bacteria 6494267
252 2838029889 2838029111 Bacteria 6603031
253 2841869878 2841864319 Bacteria 6742987
254 2842204474 2842198810 Bacteria 6608673
255 2842346376 2842341865 Bacteria 7003929
256 2842476826 2842475841 Bacteria 6603183
257 2842484639 2842482326 Bacteria 7212537
258 2842503417 2842502639 Bacteria 6604161
259 2842522886 2842521101 Bacteria 6569494
260 2854899208 2854896431 Bacteria 5869725
261 2854918761 2854916844 Bacteria 5725939
262 2913313725 2913308742 Bacteria 5350706
263 2919174777 2919171160 Bacteria 6499771
264 2919409898 2919408235 Bacteria 6149349
265 2936372124 2936367885 Bacteria 7324495
266 2936382974 2936381700 Bacteria 7006523
267 2996896436 2996893221 Bacteria 5823108
268 3002144690 3002141150 Bacteria 5254435
269 3005448361 3005445848 Bacteria 6906074
270 8005303042 8005301065 Bacteria 6614431
271 8005435072 8005430974 Bacteria 6689030
272 8005485348 8005484373 Bacteria 6297373
273 8005545543 8005542996 Bacteria 7077758
274 8005557096 8005556819 Bacteria 6908598
275 8005682975 8005682033 Bacteria 6726518
276 8005692188 8005688590 Bacteria 6610080
277 8018134013 8018127388 Bacteria 7351159
278 8024482948 8024479707 Bacteria 6954785
279 8024487946 8024486573 Bacteria 6540512
280 8049295246 8049293176 Bacteria 6128433
281 8054560760 8054558443 Bacteria 5204801
282 8054565675 8054563764 Bacteria 5592885
283 JGI24740J21852_10022870
284 JGI25155J39150_1000001
285 JGI25156J39149_1000001
286 JGI25162J39368_1000380
287 JGI25154J39366_1000011
288 JGI25158J39367_1000129
289 JGI25157J39369_1000079
290 JGI25152J39213_1004611
291 JGI25152J39213_1010835
292 JGI25159J45721_1000613
293 JGI25159J45721_1001660
294 JGI25165J46597_1000422
295 JGI25153J46596_10003058
296 JGI25153J46596_10009561
297 JGI25153J46596_10011070
298 JGI25160J50197_1000001
299 JGI25160J50197_1008873
300 JGI25161J50226_1000001
301 JGI25161J50226_1000099
302 JGI25161J50226_1000140
303 Ga0006562J51391_1036025
304 Ga0055526_1005523
305 Ga0055524_1002368
306 Ga0055536_1009417
307 Ga0055528_1003598
308 Ga0055530_10018535
309 Ga0055530_10029275
310 Ga0055540_1001971
311 Ga0055540_1008899
312 Ga0055531_10004084
313 Ga0055531_10010659
314 Ga0055543_1000003
315 Ga0055543_1000128
316 Ga0065165_1000068
317 Ga0065165_1003952
318 Ga0065165_1017816
319 Ga0065165_1018622
320 Ga0070676_10323987
321 Ga0070669_100017900
322 Ga0070671_100043123
323 Ga0070674_100102228
324 Ga0070673_100636683
325 Ga0070667_100648567
326 Ga0070700_100377504
327 Ga0070665_100181663
328 Ga0070665_100182685
329 Ga0068856_100025945
330 Ga0068862_100010663
331 Ga0068862_100318333
332 Ga0075369_10014179
333 Ga0075370_10103814
334 Ga0075428_100107175
335 Ga0068865_100180091
336 Ga0099794_10139875
337 Ga0105250_10107133
338 Ga0114129_10326183
339 Ga0123341_1000032
340 Ga0105239_10041426
341 Ga0157380_10166976
342 Ga0213874_10078308
343 Ga0209435_100012
344 Ga0209436_100029
345 Ga0209437_100047
346 Ga0207425_1006673
347 Ga0207425_1017064
348 Ga0209646_1000026
349 Ga0209026_1000014
350 Ga0209148_1022731
351 Ga0209759_1000012
352 Ga0209129_1000384
353 Ga0209129_1002877
354 Ga0209129_1005114
355 Ga0209129_1005300
356 Ga0209233_1000048
357 Ga0209130_1000003
358 Ga0209130_1000020
359 Ga0209130_1027339
360 Ga0209025_1009763
361 Ga0209025_1137729
362 Ga0209564_1000512
363 Ga0209564_1020061
364 Ga0209758_1000642
365 Ga0209758_1002951
366 Ga0209758_1003364
367 Ga0209758_1012299
368 Ga0209758_1070393
369 Ga0209050_1012937
370 Ga0209256_1000442
371 Ga0209256_1009553
372 Ga0207426_1000008
373 Ga0207426_1000011
374 Ga0209051_1002410
375 Ga0209051_1007466
376 Ga0209257_1003491
377 Ga0209257_1024872
378 Ga0207692_10068387
379 Ga0207681_10056866
380 Ga0207659_10051374
381 Ga0207644_10062668
382 Ga0207706_10925155
383 Ga0207704_10043698
384 Ga0207651_10974127
385 Ga0207702_10018061
386 Ga0207675_100138466
387 Ga0209371_1007288
388 Ga0207428_10000078
389 Ga0268266_10414228
390 Ga0268265_10404801
391 Ga0307515_10000556
392 Ga0307515_10000788
393 Ga0307515_10017597
394 Ga0307515_10288417
395 Ga0268256_1007489
396 Ga0307513_10025659
397 Ga0307516_10396950
398 Ga0307412_10260797
399 Ga0316596_1037649
400 Ga0373936_0022344
401 Ga0395905_0001960
402 Ga0436364_1477734
403 Ga0439465_0001082
404 Ga0439465_0114580
405 Ga0439432_009604
406 Ga0439458_0033371
407 Ga0439435_0000576
408 Ga0439459_0150651
409 Ga0466972_0243680
410 Ga0466963_0006812
411 Ga0466970_0011908
412 Ga0466958_0009384
413 Ga0495617_013469
414 Ga0495629_0034354
415 Ga0495638_0000195
416 Ga0495605_0007566
417 Ga0495585_0006794
418 Ga0495583_0057505
419 Ga0495606_0002164
420 Ga0495610_0011895
421 Ga0495616_0241836
422 Ga0495620_0117510
423 Ga0495631_0001628
424 Ga0495632_0034615
425 Ga0495643_0078291
426 Ga0495587_0238127
427 Ga0495668_0013421
428 Ga0495634_0243220
429 Ga0495611_0009701
430 Ga0495625_0000621
431 Ga0495625_0299579
432 Ga0495657_0020297
433 Ga0495658_0110688
434 Ga0495624_0114715
435 Ga0495671_0149582
436 Ga0495600_0119365
437 Ga0495660_0021318
438 Ga0495604_0043252
439 Ga0495672_0005251
440 Ga0495683_0080059
441 Ga0496102_0669025
442 Ga0496106_0000578
443 Ga0496116_0007744
444 Ga0496116_0021014
445 Ga0496116_0025850
446 Ga0496117_0220580
447 Ga0496118_0200631
448 Ga0496119_0019449
449 Ga0496121_0005561
450 Ga0496121_0061579
451 Ga0496121_0103821
452 Ga0496121_0439731
453 Ga0496122_0002690
454 Ga0496122_0035177
455 Ga0496122_0043776
456 Ga0496122_0126436
457 Ga0496122_0138231
458 Ga0496123_0000054
459 Ga0496123_0033667
460 Ga0496123_0117255
461 Ga0496123_0205694
462 Ga0496124_0046133
463 Ga0496124_0197117
464 Ga0496124_0280921
465 Ga0496125_0066189
466 Ga0496125_0085645
467 Ga0496125_0286705
468 Ga0496126_0044422
469 Ga0501032_0045264
470 Ga0501033_0041206
471 Ga0501033_0455292
472 Ga0501034_0000538
473 Ga0501034_0071468
474 Ga0501034_0207431
475 Ga0501038_0104965
476 Ga0501043_0482239
477 Ga0501047_0242878
478 Ga0501035_0290308
479 Ga0501044_0244253
480 Ga0501044_0673945
481 nmdc:mga0yw44_399776_c1
482 nmdc:mga08y16_66_c1
483 Ga0500610_0034789
484 Ga0495619_0267049
485 Ga0500643_023448
486 Ga0500654_080632
487 Ga0500557_003926
488 Ga0500594_0002292
489 Ga0500559_0122944
490 Ga0500568_0005767
491 Ga0500573_0000585
492 Ga0500616_0045814
493 2842369044
494 2509392136
495 2509445781
496 2509446917
497 2510133875
498 2511135314
499 2512533543
500 2513909189
501 2513996875
502 2517407319
503 2520381430
504 2530646033
505 2585267514
506 2585271051
507 2585386576
508 2585558775
509 2585898172
510 2585904255
511 2585996123
512 2587980628
513 2600374419
514 2643811588
515 2644050592
516 2644205066
517 2644210094
518 2644298597
519 2644374837
520 2644483510
521 2644491967
522 2644653646
523 2644656826
524 2671111510
525 2724110677
526 2725952640
527 2738948862
528 2778175342
529 2792585200
530 2793314617
531 2793330518
532 2793339123
533 2838028395
534 2838029889
535 2841869878
536 2842204474
537 2842346376
538 2842476826
539 2842484639
540 2842503417
541 2842522886
542 2854899208
543 2854918761
544 2913313725
545 2919174777
546 2919409898
547 2936372124
548 2936382974
549 2996896436
550 3002144690
551 3005448361
552 8005303042
553 8005435072
554 8005485348
555 8005545543
556 8005557096
557 8005682975
558 8005692188
559 8018134013
560 8024482948
561 8024487946
562 8049295246
563 8054560760
564 8054565675

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02979

NHase_alpha

Nitrile hydratase, alpha chain

21

204

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zge-assembly4.cif.gz_G double mutant h80w/h81w of fe-type nitrile hydratase from comamonas testosteroni ni1 0.858 12 198
4zgj-assembly1.cif.gz_A double mutant h80a/h81a of fe-type nitrile hydratase from comamonas testosteroni ni1 0.8575 12 198
4zgd-assembly7.cif.gz_M mutant r157a of fe-type nitrile hydratase from comamonas testosteroni ni1 0.8561 12 198
4fm4-assembly5.cif.gz_I wild type fe-type nitrile hydratase from comamonas testosteroni ni1 0.8558 12 198
3vyh-assembly1.cif.gz_A-2 crystal structure of aw116r mutant of nitrile hydratase from pseudonocardia thermophilla 0.8306 2 197
ID Description Score Start End Superfamily
4fm4G00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8435 12 198 3.90.330.10
4ob0A00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8232 2 197 3.90.330.10
2zcfA00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.8147 1 198 3.90.330.10
2zcfA00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.807 1 198 3.90.330.10
2dd5C00 Alpha Beta;Alpha-Beta Complex;Nitrile Hydratase; Chain A;Nitrile hydratase alpha /Thiocyanate hydrolase gamma 0.7774 10 196 3.90.330.10
ID Description Score Start End GO Terms
AF-A0A436B7D9-F1-model_v4 deleted 0.982 139 198
AF-A0A4V3MDZ8-F1-model_v4 deleted 0.9815 115 199
AF-A0A7W1LT99-F1-model_v4 Nitrile hydratase subunit alpha 0.9807 128 195 GO:0003824
GO:0046914
AF-Q1T792-F1-model_v4 Thiocyanate hydrolase gamma subunit 0.9801 141 196 GO:0016787
GO:0046914
AF-A0A526YFI9-F1-model_v4 Nitrile hydratase subunit alpha (EC 4.2.1.84) 0.9796 50 198 GO:0018822
GO:0046914

Map