F385443

General Info

Members Datasets Scaffolds Average Seq Length
283 198 566 1046

Family's Representative Sequence

Representative Sequence 3300005548|Ga0070665_100000267|Ga0070665_10000026754
Length 1073
Sequence MFQKFIERPVLSTVISILLVIVGVLGLTKLPLERFPNIAPPSVLVSAVYPGANAETILRSVTPSLEEAINGVENMTYMTSTASNDGTLGITVYFKQGTNPDQAAVNVQNRVSQATSQLPAEVVQYGITTTKQQNSFIGAIGLYSEDTKKYDATFVNNYAQINIIPELKRITGVGSAQVFGGIKDYSMRVWLNPGQLAAYKITPAEVMAAIQDKNLEAAPGKFGEQSPVAFEYVIKYKGKLTTPEEYQNIAIRANADGSVLRLKDVARVELGAYSYGSVNRLNGHDGITIGVIQLSGSNANEIQIAIDKLMVKLSKDFPSGIKYNQFYRTKTDLDESIDQVEHTLIEAFVLVFIVVLIFLQDFRSTLIPAIAVPVAIIGTFFFMSLFGFSVNLLTLFALVLAIGIVVDDAIVVVEAVHAKMESDPSLTPKAATTGAMHEISGAIISITLVMAAVFLPVSFMTGSTGIFYRQFALTMSIAIIISAVNALTLSPALAALFLKNKHTEGGHNAPKKSFVEKFYAGFNGSFNYMTNRYIGGLKVLIRNKWISMAGLALVVAVTVFLVNRTKTGFIPTEDQGFVAIAVSTPSGTSLSNTNKILKQAEAQLNTLPSQRFVMSLAGFNFLTLSNSPSAGQIFLLLKPSKDRGAVKNIDDIQNIIRGKLAGIPGGTFFVFSFPTVPGFSNVEALDVMLQDKTNGRLDKFSGVANNFIGKLMQKPAIAFAFTSYKADYPQYQLEIDDEKANQLGVNVKDILSTMQAYFGTAQASDFNRFGKYYRVIVEADIADRTDPSAIDRVFVKNKSGETVPINSMVKLTRVYGSETASRYNLFNSIEVNAIPKPGYSSGDAIKAIEETAKEQLPNGFAYEFSGQTREEISSGGQSGIIFMLCLVFVYFLLAAQYESYILPLAVILSIPTGILGVFVVLGLTGIENNIYVQVALIMLIGLLAKNAILIVEFAVQRRRAGLSLVQSALEAARLRIRPIIMTSLAFVFGLFPMSIATGPSAQGNHSISIGAAGGMVSGVILGLFIIPVLFVIFQHLQERVSGVPVAVLNGGAIDKHQDMNGNHVPAIEEAETV

Samples

Sample ID Description Type Environment
1 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
7 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
8 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
9 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
29 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
30 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
31 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
45 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
46 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
50 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
51 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
52 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
53 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
54 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
55 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
74 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
79 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
90 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
91 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
92 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
102 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
103 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
104 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
108 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
109 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
110 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
111 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
114 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
122 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
123 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
124 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
125 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
126 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
127 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
128 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
129 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
130 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
131 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
132 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
133 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
134 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
135 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
136 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
137 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
138 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
139 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
140 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
141 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
142 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
143 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
144 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
145 2738541283 Pedobacter sp. OK701 Isolate Unclassified
146 2738541284 Pedobacter sp. YR016 Isolate Unclassified
147 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
148 2738541302 Pedobacter sp. CF074 Isolate Unclassified
149 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
150 2738543023 Pedobacter sp. OK628 Isolate Unclassified
151 2739367651 Pedobacter sp. OK291 Isolate Unclassified
152 2739367656 Pedobacter sp. CF523 Isolate Unclassified
153 2739367663 Pedobacter sp. YR510 Isolate Unclassified
154 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
155 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
156 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
157 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
158 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
159 2818991437 Pedobacter terrae 518 Isolate Unclassified
160 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
161 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
162 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
163 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
164 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
165 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
166 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
167 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
168 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
169 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
170 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
171 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
172 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
173 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
174 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
175 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
176 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
177 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
178 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
179 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
180 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
181 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
182 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
183 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
184 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
185 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
186 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
187 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
188 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
189 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
190 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
191 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
192 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
193 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
194 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
195 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
196 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
197 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
198 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.03
Metatranscriptomes 0
Isolates 22.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.66
Nodule 1.77
Rhizoplane 0.71
Rhizosphere 65.37
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070665_100000267 3300005548 Bacteria 85526
2 SwRhRL2b_contig_2129928 2162886007 Bacteria 23765
3 SwRhRL2b_contig_987791 2162886007 Bacteria 3806
4 JGI24737J22298_10000159 3300001990 Bacteria 21262
5 JGI24735J21928_10000001 3300002067 Bacteria 650042
6 JGI25162J39368_1000020 3300002737 Bacteria 254723
7 JGI25154J39366_1000157 3300002738 Bacteria 52619
8 JGI25152J39213_1000067 3300002773 Bacteria 68480
9 JGI25150J39212_1000001 3300002774 Bacteria 1318726
10 JGI25151J46595_10000005 3300003187 Bacteria 431598
11 JGI25153J46596_10000040 3300003215 Bacteria 165523
12 rootH2_10004991 3300003320 Bacteria 34166
13 rootH1_10005851 3300003323 Bacteria 85811
14 Ga0055536_1000564 3300003781 Bacteria 25322
15 Ga0055530_10003625 3300003791 Bacteria 8670
16 Ga0055531_10000284 3300003794 Bacteria 51146
17 Ga0065714_10002200 3300005288 Bacteria 145275
18 Ga0065714_10064461 3300005288 Bacteria 66149
19 Ga0065714_10067915 3300005288 Bacteria 5113
20 Ga0065714_10071917 3300005288 Bacteria 3468
21 Ga0065704_10070168 3300005289 Bacteria 171820
22 Ga0065704_10071641 3300005289 Bacteria 10399
23 Ga0065704_10072507 3300005289 Bacteria 8407
24 Ga0065704_10075872 3300005289 Bacteria 5377
25 Ga0070676_10000144 3300005328 Bacteria 27905
26 Ga0070659_100000185 3300005366 Bacteria 47638
27 Ga0070659_100017144 3300005366 Bacteria 5445
28 Ga0070678_100009112 3300005456 Bacteria 5989
29 Ga0070662_100000083 3300005457 Bacteria 51358
30 Ga0068867_100002189 3300005459 Bacteria 13719
31 Ga0068855_100000867 3300005563 Bacteria 37567
32 Ga0068856_100015141 3300005614 Bacteria 7450
33 Ga0075366_10000041 3300006195 Bacteria 45335
34 Ga0097621_100000344 3300006237 Bacteria 31894
35 Ga0068865_100000373 3300006881 Bacteria 24834
36 Ga0099824_1000629 3300006942 Bacteria 43641
37 Ga0079104_1000119 3300006946 Bacteria 112250
38 Ga0099826_10009734 3300006948 Bacteria 7178
39 Ga0105244_10000022 3300009036 Bacteria 234186
40 Ga0105240_10000073 3300009093 Bacteria 201032
41 Ga0105240_10000126 3300009093 Bacteria 157403
42 Ga0105240_10012320 3300009093 Bacteria 11811
43 Ga0105240_10015302 3300009093 Bacteria 10438
44 Ga0105243_10000012 3300009148 Bacteria 300885
45 Ga0105237_10000168 3300009545 Bacteria 92212
46 Ga0105237_10001802 3300009545 Bacteria 27654
47 Ga0105237_10002695 3300009545 Bacteria 21736
48 Ga0105237_10007861 3300009545 Bacteria 11626
49 Ga0105237_10025521 3300009545 Bacteria 6043
50 Ga0105239_10000006 3300010375 Bacteria 442319
51 Ga0105239_10000007 3300010375 Bacteria 385297
52 Ga0105239_10000139 3300010375 Bacteria 102090
53 Ga0105239_10000178 3300010375 Bacteria 92196
54 Ga0105239_10000915 3300010375 Bacteria 41833
55 Ga0105239_10002186 3300010375 Bacteria 25152
56 Ga0105239_10005553 3300010375 Bacteria 14759
57 Ga0157373_10000008 3300013100 Bacteria 216306
58 Ga0157373_10000048 3300013100 Bacteria 110104
59 Ga0157373_10002164 3300013100 Bacteria 14872
60 Ga0157373_10006258 3300013100 Bacteria 8894
61 Ga0157371_10000328 3300013102 Bacteria 61237
62 Ga0157371_10009995 3300013102 Bacteria 7425
63 Ga0157371_10014618 3300013102 Bacteria 5915
64 Ga0157370_10001765 3300013104 Bacteria 26690
65 Ga0157370_10002663 3300013104 Bacteria 21427
66 Ga0157370_10027833 3300013104 Bacteria 5570
67 Ga0157370_10033948 3300013104 Bacteria 4971
68 Ga0157370_10038406 3300013104 Bacteria 4631
69 Ga0157369_10000004 3300013105 Bacteria 479764
70 Ga0157369_10001523 3300013105 Bacteria 28414
71 Ga0157369_10038188 3300013105 Bacteria 5251
72 Ga0157369_10043809 3300013105 Bacteria 4876
73 Ga0157369_10063188 3300013105 Bacteria 3989
74 Ga0157374_10000520 3300013296 Bacteria 34630
75 Ga0157374_10030822 3300013296 Bacteria 4871
76 Ga0163162_10000074 3300013306 Bacteria 91138
77 Ga0163162_10000626 3300013306 Bacteria 32847
78 Ga0163162_10010072 3300013306 Bacteria 9189
79 Ga0163162_10034490 3300013306 Bacteria 5036
80 Ga0157372_10000093 3300013307 Bacteria 91860
81 Ga0157372_10016546 3300013307 Bacteria 7914
82 Ga0182008_10000018 3300014497 Bacteria 230609
83 Ga0182008_10000465 3300014497 Bacteria 30995
84 Ga0182008_10002786 3300014497 Bacteria 10829
85 Ga0182006_1000114 3300015261 Bacteria 86594
86 Ga0182006_1000335 3300015261 Bacteria 40157
87 Ga0182006_1000888 3300015261 Bacteria 20046
88 Ga0182006_1000890 3300015261 Bacteria 20024
89 Ga0182007_10000027 3300015262 Bacteria 167235
90 Ga0183373_1003 3300015682 Bacteria 558813
91 Ga0163161_10000056 3300017792 Bacteria 114387
92 Ga0163161_10000402 3300017792 Bacteria 36217
93 Ga0163161_10003155 3300017792 Bacteria 11628
94 Ga0163161_10007715 3300017792 Bacteria 7444
95 Ga0163161_10010898 3300017792 Bacteria 6303
96 Ga0207427_100025 3300025231 Bacteria 433726
97 Ga0209437_100010 3300025233 Bacteria 838447
98 Ga0209437_100085 3300025233 Bacteria 254790
99 Ga0207425_1000002 3300025245 Bacteria 1362590
100 Ga0209646_1000003 3300025246 Bacteria 1160860
101 Ga0209026_1000473 3300025250 Bacteria 30746
102 Ga0209026_1002491 3300025250 Bacteria 6845
103 Ga0209129_1000002 3300025258 Bacteria 1359086
104 Ga0209233_1000017 3300025261 Bacteria 898076
105 Ga0209233_1004228 3300025261 Bacteria 4917
106 Ga0209676_1000008 3300025292 Bacteria 991778
107 Ga0209025_1000004 3300025294 Bacteria 1361782
108 Ga0209758_1000006 3300025297 Bacteria 1359562
109 Ga0209050_1001255 3300025298 Bacteria 29270
110 Ga0207426_1000187 3300025302 Bacteria 153809
111 Ga0209257_1000071 3300025304 Bacteria 335832
112 Ga0207655_1000052 3300025728 Bacteria 291090
113 Ga0207647_10000063 3300025904 Bacteria 83442
114 Ga0207647_10000098 3300025904 Bacteria 67170
115 Ga0207645_10000185 3300025907 Bacteria 49988
116 Ga0207695_10000013 3300025913 Bacteria 821265
117 Ga0207695_10000151 3300025913 Bacteria 206493
118 Ga0207695_10007617 3300025913 Bacteria 13720
119 Ga0207695_10031516 3300025913 Bacteria 5811
120 Ga0207671_10001505 3300025914 Bacteria 26868
121 Ga0207671_10002877 3300025914 Bacteria 17823
122 Ga0207671_10003685 3300025914 Bacteria 15105
123 Ga0207671_10009538 3300025914 Bacteria 8099
124 Ga0207690_10000287 3300025932 Bacteria 35924
125 Ga0207690_10012728 3300025932 Bacteria 5042
126 Ga0207706_10000176 3300025933 Bacteria 70917
127 Ga0207709_10000006 3300025935 Bacteria 800946
128 Ga0207704_10000055 3300025938 Bacteria 78858
129 Ga0207667_10022813 3300025949 Bacteria 6903
130 Ga0207667_10031574 3300025949 Bacteria 5715
131 Ga0207648_10000775 3300026089 Bacteria 36025
132 Ga0207683_10044779 3300026121 Bacteria 3869
133 Ga0209281_1000238 3300027111 Bacteria 112268
134 Ga0209489_111681 3300027361 Bacteria 8733
135 Ga0268266_10000018 3300028379 Bacteria 569141
136 Ga0307517_10010105 3300028786 Bacteria 13262
137 Ga0307515_10001738 3300028794 Bacteria 48492
138 Ga0307515_10010222 3300028794 Bacteria 18019
139 Ga0316176_1124656 3300030732 Bacteria 38772
140 Ga0316183_1160060 3300030742 Bacteria 39452
141 Ga0265339_10009542 3300031249 Bacteria 6088
142 Ga0307513_10052084 3300031456 Bacteria 4410
143 Ga0307405_10000002 3300031731 Bacteria 575196
144 Ga0307405_10000008 3300031731 Bacteria 264953
145 Ga0307413_10001630 3300031824 Bacteria 8692
146 Ga0307410_10000102 3300031852 Bacteria 29992
147 Ga0307406_10000075 3300031901 Bacteria 54768
148 Ga0307407_10000026 3300031903 Bacteria 108029
149 Ga0307409_100007715 3300031995 Bacteria 6467
150 Ga0307416_100000053 3300032002 Bacteria 108029
151 Ga0307414_10000002 3300032004 Bacteria 623006
152 Ga0307414_10000109 3300032004 Bacteria 58307
153 Ga0307414_10002842 3300032004 Bacteria 9134
154 Ga0307411_10000006 3300032005 Bacteria 382357
155 Ga0307507_10000170 3300033179 Bacteria 116878
156 Ga0307510_10027214 3300033180 Bacteria 6556
157 Ga0395899_0000001 3300037312 Bacteria 1750322
158 Ga0395899_0001160 3300037312 Bacteria 23301
159 Ga0395900_0004024 3300037418 Bacteria 15689
160 Ga0395900_0035758 3300037418 Bacteria 5118
161 Ga0395905_0001097 3300037471 Bacteria 34059
162 Ga0395901_0000523 3300038443 Bacteria 44364
163 Ga0436361_0642893 3300039447 Bacteria 17023
164 Ga0495650_0000014 3300046471 Bacteria 581606
165 Ga0495585_0000156 3300046492 Bacteria 72941
166 Ga0495585_0000158 3300046492 Bacteria 72351
167 Ga0495606_0000241 3300046507 Bacteria 96663
168 Ga0495606_0004960 3300046507 Bacteria 12991
169 Ga0495610_0000233 3300046512 Bacteria 59298
170 Ga0495610_0000914 3300046512 Bacteria 27420
171 Ga0495610_0001190 3300046512 Bacteria 23538
172 Ga0495616_0008709 3300046513 Bacteria 5986
173 Ga0495643_0000268 3300046522 Bacteria 75600
174 Ga0495633_0000014 3300046558 Bacteria 261742
175 Ga0495668_0000012 3300046616 Bacteria 458817
176 Ga0495668_0000023 3300046616 Bacteria 363848
177 Ga0495625_0000003 3300046660 Bacteria 686847
178 Ga0495625_0000705 3300046660 Bacteria 47240
179 Ga0495625_0002843 3300046660 Bacteria 18193
180 Ga0495625_0008802 3300046660 Bacteria 8546
181 Ga0495625_0011640 3300046660 Bacteria 7156
182 Ga0495661_0003223 3300046665 Bacteria 12173
183 Ga0495649_0000002 3300046694 Bacteria 1093458
184 Ga0495660_0002444 3300046810 Bacteria 11857
185 Ga0495687_000345 3300047443 Bacteria 59578
186 Ga0495686_0001054 3300047472 Bacteria 32954
187 Ga0495686_0001792 3300047472 Bacteria 21777
188 Ga0496115_0007952 3300048918 Bacteria 7827
189 Ga0496116_0000004 3300048919 Bacteria 839841
190 Ga0496117_0001563 3300048920 Bacteria 32504
191 Ga0496121_0009390 3300048924 Bacteria 11252
192 Ga0496122_0000804 3300048925 Bacteria 60178
193 Ga0496122_0005318 3300048925 Bacteria 15396
194 Ga0496123_0007818 3300048926 Bacteria 9953
195 Ga0496123_0007924 3300048926 Bacteria 9866
196 Ga0496124_0042554 3300048927 Bacteria 3910
197 Ga0496125_0000082 3300048928 Bacteria 227300
198 Ga0496125_0000213 3300048928 Bacteria 119068
199 Ga0496126_0002629 3300048929 Bacteria 23884
200 Ga0496126_0013727 3300048929 Bacteria 8216
201 Ga0496126_0033901 3300048929 Bacteria 4802
202 Ga0495678_004215 3300049459 Bacteria 8450
203 Ga0501238_000241 3300049671 Bacteria 7623
204 Ga0501249_000030 3300049679 Bacteria 80958
205 Ga0501266_000008 3300049763 Bacteria 241629
206 Ga0501280_000530 3300049776 Bacteria 8953
207 Ga0501284_00056 3300050005 Bacteria 40506
208 nmdc:mga0k408_16_c2 3300050493 Bacteria 101089
209 Ga0500644_0000035 3300053088 Bacteria 82815
210 Ga0500641_0000032 3300053096 Bacteria 82232
211 Ga0500641_0000219 3300053096 Bacteria 21313
212 Ga0500608_003870 3300053122 Bacteria 5707
213 Ga0500618_000002 3300053125 Bacteria 370822
214 Ga0500658_0000017 3300053134 Bacteria 142994
215 Ga0500658_0003647 3300053134 Bacteria 5806
216 Ga0500577_0000822 3300053142 Bacteria 8009
217 Ga0500622_0000451 3300053156 Bacteria 39078
218 Ga0500622_0001337 3300053156 Bacteria 19977
219 2513233259 2513020052 Bacteria 5120511
220 2520881608 2519899754 Bacteria 5336938
221 2522553139 2522125168 Bacteria 7376607
222 2586209542 2585427687 Bacteria 5544917
223 2599477234 2599185184 Bacteria 6430550
224 2644008714 2643221600 Bacteria 5530138
225 2644372894 2643221667 Bacteria 5627472
226 2644643081 2643221716 Bacteria 4986332
227 2644683058 2643221725 Bacteria 5087956
228 2738736868 2738541279 Bacteria 6149495
229 2738754425 2738541283 Bacteria 7222293
230 2738761092 2738541284 Bacteria 5199923
231 2738769408 2738541285 Bacteria 6150075
232 2738853166 2738541302 Bacteria 5944758
233 2739218483 2738543007 Bacteria 6149845
234 2739304618 2738543023 Bacteria 6767879
235 2739590399 2739367651 Bacteria 6359826
236 2739617385 2739367656 Bacteria 5152243
237 2739647578 2739367663 Bacteria 5040914
238 2740001751 2739367857 Bacteria 5433684
239 2740006567 2739367858 Bacteria 5432813
240 2776613307 2775506987 Bacteria 5373360
241 2802654318 2802428842 Bacteria 4926114
242 2817416880 2816332280 Bacteria 5109718
243 2819548299 2818991437 Bacteria 5805520
244 2842726060 2842722452 Bacteria 6263924
245 2842914976 2842909656 Bacteria 6185908
246 2849286743 2849281842 Bacteria 6065644
247 2852624195 2852623160 Bacteria 4376875
248 2852628567 2852627209 Bacteria 5896285
249 2857616683 2857613821 Bacteria 4917088
250 2857620818 2857618242 Bacteria 5635925
251 2857632148 2857627736 Bacteria 5625397
252 2881247794 2881247448 Bacteria 3717788
253 2881360654 2881359912 Bacteria 4935907
254 2884936888 2884933994 Bacteria 4535041
255 2902049750 2902048731 Bacteria 4976191
256 2903899396 2903895155 Bacteria 5258610
257 2904421481 2904419702 Bacteria 5166287
258 2904448131 2904445276 Bacteria 5310396
259 2904556972 2904555929 Bacteria 5218588
260 2904559485 2904555929 Bacteria 5218588
261 2919186938 2919186247 Bacteria 6244071
262 2919195088 2919191525 Bacteria 5765973
263 2919441181 2919437846 Bacteria 6199444
264 2919511613 2919509842 Bacteria 4104664
265 2919686651 2919683626 Bacteria 5534354
266 2919693611 2919692658 Bacteria 5943958
267 2928079150 2928078545 Bacteria 6534839
268 2928148479 2928147474 Bacteria 6512076
269 2929154100 2929150217 Bacteria 5462483
270 2929926472 2929921140 Bacteria 8649150
271 2932085776 2932082852 Bacteria 6563563
272 2939665793 2939664404 Bacteria 6364494
273 2946001512 2945997725 Bacteria 6404843
274 2954018498 2954016120 Bacteria 6446024
275 2958461732 2958458903 Bacteria 5301041
276 2958512495 2958512119 Bacteria 4528530
277 2965323359 2965320100 Bacteria 3975600
278 2977234562 2977232053 Bacteria 5485925
279 2977270770 2977268062 Bacteria 5243061
280 8054311270 8054307821 Bacteria 5212224
281 8055422376 8055419101 Bacteria 5289643
282 8055595735 8055592153 Bacteria 5961247
283 8056442396 8056440228 Bacteria 4946504
284 Ga0070665_100000267
285 SwRhRL2b_contig_2129928
286 SwRhRL2b_contig_987791
287 JGI24737J22298_10000159
288 JGI24735J21928_10000001
289 JGI25162J39368_1000020
290 JGI25154J39366_1000157
291 JGI25152J39213_1000067
292 JGI25150J39212_1000001
293 JGI25151J46595_10000005
294 JGI25153J46596_10000040
295 rootH2_10004991
296 rootH1_10005851
297 Ga0055536_1000564
298 Ga0055530_10003625
299 Ga0055531_10000284
300 Ga0065714_10002200
301 Ga0065714_10064461
302 Ga0065714_10067915
303 Ga0065714_10071917
304 Ga0065704_10070168
305 Ga0065704_10071641
306 Ga0065704_10072507
307 Ga0065704_10075872
308 Ga0070676_10000144
309 Ga0070659_100000185
310 Ga0070659_100017144
311 Ga0070678_100009112
312 Ga0070662_100000083
313 Ga0068867_100002189
314 Ga0068855_100000867
315 Ga0068856_100015141
316 Ga0075366_10000041
317 Ga0097621_100000344
318 Ga0068865_100000373
319 Ga0099824_1000629
320 Ga0079104_1000119
321 Ga0099826_10009734
322 Ga0105244_10000022
323 Ga0105240_10000073
324 Ga0105240_10000126
325 Ga0105240_10012320
326 Ga0105240_10015302
327 Ga0105243_10000012
328 Ga0105237_10000168
329 Ga0105237_10001802
330 Ga0105237_10002695
331 Ga0105237_10007861
332 Ga0105237_10025521
333 Ga0105239_10000006
334 Ga0105239_10000007
335 Ga0105239_10000139
336 Ga0105239_10000178
337 Ga0105239_10000915
338 Ga0105239_10002186
339 Ga0105239_10005553
340 Ga0157373_10000008
341 Ga0157373_10000048
342 Ga0157373_10002164
343 Ga0157373_10006258
344 Ga0157371_10000328
345 Ga0157371_10009995
346 Ga0157371_10014618
347 Ga0157370_10001765
348 Ga0157370_10002663
349 Ga0157370_10027833
350 Ga0157370_10033948
351 Ga0157370_10038406
352 Ga0157369_10000004
353 Ga0157369_10001523
354 Ga0157369_10038188
355 Ga0157369_10043809
356 Ga0157369_10063188
357 Ga0157374_10000520
358 Ga0157374_10030822
359 Ga0163162_10000074
360 Ga0163162_10000626
361 Ga0163162_10010072
362 Ga0163162_10034490
363 Ga0157372_10000093
364 Ga0157372_10016546
365 Ga0182008_10000018
366 Ga0182008_10000465
367 Ga0182008_10002786
368 Ga0182006_1000114
369 Ga0182006_1000335
370 Ga0182006_1000888
371 Ga0182006_1000890
372 Ga0182007_10000027
373 Ga0183373_1003
374 Ga0163161_10000056
375 Ga0163161_10000402
376 Ga0163161_10003155
377 Ga0163161_10007715
378 Ga0163161_10010898
379 Ga0207427_100025
380 Ga0209437_100010
381 Ga0209437_100085
382 Ga0207425_1000002
383 Ga0209646_1000003
384 Ga0209026_1000473
385 Ga0209026_1002491
386 Ga0209129_1000002
387 Ga0209233_1000017
388 Ga0209233_1004228
389 Ga0209676_1000008
390 Ga0209025_1000004
391 Ga0209758_1000006
392 Ga0209050_1001255
393 Ga0207426_1000187
394 Ga0209257_1000071
395 Ga0207655_1000052
396 Ga0207647_10000063
397 Ga0207647_10000098
398 Ga0207645_10000185
399 Ga0207695_10000013
400 Ga0207695_10000151
401 Ga0207695_10007617
402 Ga0207695_10031516
403 Ga0207671_10001505
404 Ga0207671_10002877
405 Ga0207671_10003685
406 Ga0207671_10009538
407 Ga0207690_10000287
408 Ga0207690_10012728
409 Ga0207706_10000176
410 Ga0207709_10000006
411 Ga0207704_10000055
412 Ga0207667_10022813
413 Ga0207667_10031574
414 Ga0207648_10000775
415 Ga0207683_10044779
416 Ga0209281_1000238
417 Ga0209489_111681
418 Ga0268266_10000018
419 Ga0307517_10010105
420 Ga0307515_10001738
421 Ga0307515_10010222
422 Ga0316176_1124656
423 Ga0316183_1160060
424 Ga0265339_10009542
425 Ga0307513_10052084
426 Ga0307405_10000002
427 Ga0307405_10000008
428 Ga0307413_10001630
429 Ga0307410_10000102
430 Ga0307406_10000075
431 Ga0307407_10000026
432 Ga0307409_100007715
433 Ga0307416_100000053
434 Ga0307414_10000002
435 Ga0307414_10000109
436 Ga0307414_10002842
437 Ga0307411_10000006
438 Ga0307507_10000170
439 Ga0307510_10027214
440 Ga0395899_0000001
441 Ga0395899_0001160
442 Ga0395900_0004024
443 Ga0395900_0035758
444 Ga0395905_0001097
445 Ga0395901_0000523
446 Ga0436361_0642893
447 Ga0495650_0000014
448 Ga0495585_0000156
449 Ga0495585_0000158
450 Ga0495606_0000241
451 Ga0495606_0004960
452 Ga0495610_0000233
453 Ga0495610_0000914
454 Ga0495610_0001190
455 Ga0495616_0008709
456 Ga0495643_0000268
457 Ga0495633_0000014
458 Ga0495668_0000012
459 Ga0495668_0000023
460 Ga0495625_0000003
461 Ga0495625_0000705
462 Ga0495625_0002843
463 Ga0495625_0008802
464 Ga0495625_0011640
465 Ga0495661_0003223
466 Ga0495649_0000002
467 Ga0495660_0002444
468 Ga0495687_000345
469 Ga0495686_0001054
470 Ga0495686_0001792
471 Ga0496115_0007952
472 Ga0496116_0000004
473 Ga0496117_0001563
474 Ga0496121_0009390
475 Ga0496122_0000804
476 Ga0496122_0005318
477 Ga0496123_0007818
478 Ga0496123_0007924
479 Ga0496124_0042554
480 Ga0496125_0000082
481 Ga0496125_0000213
482 Ga0496126_0002629
483 Ga0496126_0013727
484 Ga0496126_0033901
485 Ga0495678_004215
486 Ga0501238_000241
487 Ga0501249_000030
488 Ga0501266_000008
489 Ga0501280_000530
490 Ga0501284_00056
491 nmdc:mga0k408_16_c2
492 Ga0500644_0000035
493 Ga0500641_0000032
494 Ga0500641_0000219
495 Ga0500608_003870
496 Ga0500618_000002
497 Ga0500658_0000017
498 Ga0500658_0003647
499 Ga0500577_0000822
500 Ga0500622_0000451
501 Ga0500622_0001337
502 2513233259
503 2520881608
504 2522553139
505 2586209542
506 2599477234
507 2644008714
508 2644372894
509 2644643081
510 2644683058
511 2738736868
512 2738754425
513 2738761092
514 2738769408
515 2738853166
516 2739218483
517 2739304618
518 2739590399
519 2739617385
520 2739647578
521 2740001751
522 2740006567
523 2776613307
524 2802654318
525 2817416880
526 2819548299
527 2842726060
528 2842914976
529 2849286743
530 2852624195
531 2852628567
532 2857616683
533 2857620818
534 2857632148
535 2881247794
536 2881360654
537 2884936888
538 2902049750
539 2903899396
540 2904421481
541 2904448131
542 2904556972
543 2904559485
544 2919186938
545 2919195088
546 2919441181
547 2919511613
548 2919686651
549 2919693611
550 2928079150
551 2928148479
552 2929154100
553 2929926472
554 2932085776
555 2939665793
556 2946001512
557 2954018498
558 2958461732
559 2958512495
560 2965323359
561 2977234562
562 2977270770
563 8054311270
564 8055422376
565 8055595735
566 8056442396

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00873

ACR_tran

AcrB/AcrD/AcrF family

1

1034

0.98

PF02355

SecD_SecF

Protein export membrane protein

333

500

0.8

PF03176

MMPL

MMPL family

329

520

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lq3-assembly2.cif.gz_D structures and transport dynamics of the campylobacter jejuni multidrug efflux pump cmeb 0.9313 1 1025
6zof-assembly1.cif.gz_C fusidic acid binding to the tm7/tm8 groove of acrb-f380a t protomer 0.9297 1 1020
6zo5-assembly1.cif.gz_C fusidic acid binding to the tm1/tm2 groove of acrb-g619p_g621p 0.928 1 1021
7cz9-assembly2.cif.gz_E crystal structure of multidrug efflux transporter oqxb from klebsiella pneumoniae 0.9272 3 1022
8f4r-assembly1.cif.gz_C gentamicin bound aminoglycoside efflux pump acrd 0.9267 1 1021
ID Description Score Start End Superfamily
5t0oC02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9814 26 120 3.30.70.1430
af_P24181_868_1032_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9777 859 1021 1.20.1640.10
af_P24181_41_133_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9775 29 121 3.30.70.1430
3w9iD05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9717 859 1021 1.20.1640.10
3d9bA05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.97 859 1021 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A358G7W9-F1-model_v4 deleted 0.9796 896 1026
AF-K8D5G3-F1-model_v4 deleted 0.965 771 1021
AF-E1YGF0-F1-model_v4 Uncharacterized protein 0.9617 871 1017 GO:0005886
GO:0042910
AF-A0A485JKM9-F1-model_v4 Acriflavin resistance protein B 0.9611 904 1021 GO:0005886
GO:0042910
AF-A0A4Q6ATH2-F1-model_v4 Efflux RND transporter permease subunit 0.9578 433 1027 GO:0005886
GO:0042910

Map