F385757

General Info

Members Datasets Scaffolds Average Seq Length
283 167 567 351

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0050784|Ga0453684_0050784_168_1469
Length 408
Sequence MNKAQTERESPVLITGGAGFIGTNLAHRLLSEQRHVILYDNLSRPGVEQNLAWLRATHGSRVRHEPGDVRDFARLKQVVREAGPVFHFAAQVAVTTSLTNPIEDFEINARGTLNLLEALRSLPQPPPLLFTSTNKVYGDLHQIPLRAQRNRYEPENAEVRQHGLNETCPLDFHSPYGCSKGAACQYVQDYARTFGLPAVVFRMSCIYGPRQFGTEDQGWVAHFLIKAIENTPLTIYGDGRQVRDILYVDDLVEALLLAHENIEAVSGQAFNLGGGPANTVSLLELIDLIGTLHGRCPEVQFADWRAADQQYYVSDIRRFSALTGWRPRTSVQAGVRGLYHWLLEYHRIRTEQVLQLREAAVTGPSRASTNGRRPLHPRPGSAERAAIDLRRFASNGRTPKKAKLVKAA

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
53 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
56 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
86 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
87 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
88 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
104 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
105 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
106 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
110 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
111 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
112 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
116 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
117 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
141 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
142 3300049677 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control Metagenome Rhizosphere
143 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
144 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
145 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
146 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
153 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
154 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
155 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
156 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
157 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
160 3300059630 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 165R_SD_T3_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
161 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
163 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
164 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
165 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
166 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
167 2919688452 Pararheinheimera soli 4138 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.76
Metatranscriptomes 2.47
Isolates 1.77

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.06
Nodule 0
Rhizoplane 1.41
Rhizosphere 91.17
Stem 0
Stem Tuber 0
Unclassified 5.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0050784 3300044712 Bacteria 5449
2 JGI25406J46586_10044098 3300003203 Bacteria 1547
3 rootH1_10023399 3300003316 Bacteria 14787
4 rootH1_10023399 3300003323 Bacteria 18842
5 rootH2_10097131 3300003320 Bacteria 2125
6 rootH2_10184369 3300003320 Bacteria 6111
7 rootH1_10002435 3300003323 Bacteria 19152
8 Ga0070683_100039535 3300005329 Bacteria 4331
9 Ga0070682_100001983 3300005337 Bacteria 11412
10 Ga0070660_100003977 3300005339 Bacteria 10215
11 Ga0070709_10002737 3300005434 Bacteria 9537
12 Ga0070714_100021765 3300005435 Bacteria 5249
13 Ga0070714_100085991 3300005435 Bacteria 2747
14 Ga0070708_100000433 3300005445 Bacteria 31169
15 Ga0070708_100000586 3300005445 Bacteria 27293
16 Ga0070708_100017642 3300005445 Bacteria 5959
17 Ga0070708_100023897 3300005445 Bacteria 5202
18 Ga0070708_100037662 3300005445 Bacteria 4221
19 Ga0070708_100152792 3300005445 Bacteria 2147
20 Ga0070681_10005357 3300005458 Bacteria 12383
21 Ga0070706_100000041 3300005467 Bacteria 147263
22 Ga0070706_100000219 3300005467 Bacteria 69887
23 Ga0070706_100000370 3300005467 Bacteria 53996
24 Ga0070706_100003803 3300005467 Bacteria 14741
25 Ga0070706_100029867 3300005467 Bacteria 5020
26 Ga0070706_100345549 3300005467 Bacteria 1387
27 Ga0070707_100000070 3300005468 Bacteria 92339
28 Ga0070707_100000433 3300005468 Bacteria 41481
29 Ga0070707_100004269 3300005468 Bacteria 13385
30 Ga0070707_100038873 3300005468 Bacteria 4546
31 Ga0070707_100041269 3300005468 Bacteria 4416
32 Ga0070707_100044123 3300005468 Unclassified 4268
33 Ga0070707_100047394 3300005468 Bacteria 4115
34 Ga0070707_100198179 3300005468 Bacteria 1957
35 Ga0070707_100308044 3300005468 Bacteria 1539
36 Ga0070698_100004065 3300005471 Bacteria 16088
37 Ga0070698_100005863 3300005471 Bacteria 13421
38 Ga0070698_100006432 3300005471 Bacteria 12737
39 Ga0070698_100010537 3300005471 Bacteria 9851
40 Ga0070698_100021790 3300005471 Bacteria 6710
41 Ga0070699_100000078 3300005518 Bacteria 93530
42 Ga0070699_100000080 3300005518 Bacteria 92392
43 Ga0070699_100000501 3300005518 Bacteria 37240
44 Ga0070699_100004155 3300005518 Bacteria 12799
45 Ga0070699_100023216 3300005518 Bacteria 5344
46 Ga0070699_100036807 3300005518 Bacteria 4234
47 Ga0070699_100110425 3300005518 Bacteria 2414
48 Ga0070679_100058742 3300005530 Bacteria 3833
49 Ga0070679_100127863 3300005530 Bacteria 2522
50 Ga0070684_100038437 3300005535 Unclassified 4111
51 Ga0070697_100000057 3300005536 Bacteria 86318
52 Ga0070697_100003598 3300005536 Bacteria 11907
53 Ga0070697_100003699 3300005536 Bacteria 11755
54 Ga0070697_100039338 3300005536 Bacteria 3823
55 Ga0070697_100061433 3300005536 Bacteria 3065
56 Ga0070697_100143848 3300005536 Bacteria 2006
57 Ga0068853_100000645 3300005539 Bacteria 23916
58 Ga0070695_100003438 3300005545 Bacteria 9250
59 Ga0070695_100031654 3300005545 Bacteria 3302
60 Ga0070704_100004832 3300005549 Bacteria 7811
61 Ga0068855_100017874 3300005563 Bacteria 8521
62 Ga0068855_100058295 3300005563 Bacteria 4523
63 Ga0068855_100058558 3300005563 Bacteria 4511
64 Ga0068857_100018923 3300005577 Bacteria 6042
65 Ga0068854_100007202 3300005578 Bacteria 7101
66 Ga0068854_100027922 3300005578 Bacteria 3894
67 Ga0068856_100031262 3300005614 Bacteria 5208
68 Ga0068852_100000027 3300005616 Bacteria 113819
69 Ga0068852_100167674 3300005616 Unclassified 2056
70 Ga0068851_10105121 3300005834 Bacteria 1502
71 Ga0068863_100125454 3300005841 Bacteria 2449
72 Ga0081539_10000043 3300005985 Bacteria 288108
73 Ga0081539_10000499 3300005985 Bacteria 82173
74 Ga0070717_10000214 3300006028 Bacteria 40211
75 Ga0070717_10002666 3300006028 Bacteria 12562
76 Ga0070717_10511402 3300006028 Bacteria 1086
77 Ga0070716_100138627 3300006173 Unclassified 1548
78 Ga0070712_100217305 3300006175 Bacteria 1511
79 Ga0075366_10023094 3300006195 Bacteria 3623
80 Ga0075428_100054541 3300006844 Bacteria 4380
81 Ga0075428_100495799 3300006844 Bacteria 1307
82 Ga0075433_10015884 3300006852 Bacteria 6190
83 Ga0075433_10058512 3300006852 Bacteria 3371
84 Ga0075434_100059028 3300006871 Bacteria 3814
85 Ga0075434_100254712 3300006871 Bacteria 1774
86 Ga0075436_100000855 3300006914 Bacteria 20235
87 Ga0075436_100124927 3300006914 Bacteria 1802
88 Ga0075436_100220605 3300006914 Bacteria 1345
89 Ga0075435_100017636 3300007076 Bacteria 5409
90 Ga0099794_10000067 3300007265 Bacteria 38872
91 Ga0099794_10000919 3300007265 Bacteria 9931
92 Ga0105240_10000222 3300009093 Bacteria 113825
93 Ga0105240_10015500 3300009093 Bacteria 10361
94 Ga0114129_10009187 3300009147 Bacteria 14093
95 Ga0114129_10360338 3300009147 Bacteria 1924
96 Ga0105241_10000074 3300009174 Bacteria 75523
97 Ga0105237_10004817 3300009545 Bacteria 15502
98 Ga0105237_10093459 3300009545 Bacteria 2997
99 Ga0105238_10010605 3300009551 Bacteria 9252
100 Ga0157370_10001610 3300013104 Bacteria 27915
101 Ga0157369_10000112 3300013105 Bacteria 114309
102 Ga0157372_10001211 3300013307 Bacteria 27915
103 Ga0157372_10035987 3300013307 Bacteria 5453
104 Ga0157372_10641521 3300013307 Bacteria 1237
105 Ga0206349_1661212 3300020075 Unclassified 3444
106 Ga0206352_10708427 3300020078 Unclassified 1786
107 Ga0206350_10331461 3300020080 Bacteria 6054
108 Ga0213873_10023008 3300021358 Bacteria 1481
109 Ga0213874_10009771 3300021377 Bacteria 2384
110 Ga0213876_10073875 3300021384 Bacteria 1801
111 Ga0213871_10018053 3300021441 Bacteria 1721
112 Ga0224712_10005347 3300022467 Unclassified 3566
113 Ga0207705_10094528 3300025909 Bacteria 2192
114 Ga0207684_10000002 3300025910 Bacteria 1042751
115 Ga0207684_10000010 3300025910 Bacteria 552805
116 Ga0207684_10000020 3300025910 Bacteria 342787
117 Ga0207684_10000200 3300025910 Bacteria 92329
118 Ga0207684_10058991 3300025910 Bacteria 3258
119 Ga0207684_10217597 3300025910 Bacteria 1648
120 Ga0207654_10000380 3300025911 Bacteria 25850
121 Ga0207654_10003672 3300025911 Bacteria 7737
122 Ga0207707_10035873 3300025912 Bacteria 4336
123 Ga0207695_10000028 3300025913 Bacteria 551835
124 Ga0207695_10003411 3300025913 Bacteria 22444
125 Ga0207695_10060802 3300025913 Bacteria 3908
126 Ga0207695_10142002 3300025913 Bacteria 2349
127 Ga0207671_10003647 3300025914 Bacteria 15208
128 Ga0207671_10064909 3300025914 Bacteria 2714
129 Ga0207657_10004341 3300025919 Bacteria 15019
130 Ga0207649_10059508 3300025920 Bacteria 2397
131 Ga0207652_10028766 3300025921 Bacteria 4639
132 Ga0207652_10242375 3300025921 Bacteria 1625
133 Ga0207646_10000051 3300025922 Bacteria 170502
134 Ga0207646_10000093 3300025922 Bacteria 119533
135 Ga0207646_10000190 3300025922 Bacteria 83739
136 Ga0207646_10000266 3300025922 Bacteria 71211
137 Ga0207646_10000853 3300025922 Bacteria 39441
138 Ga0207646_10001455 3300025922 Bacteria 29343
139 Ga0207646_10007575 3300025922 Bacteria 11002
140 Ga0207646_10066669 3300025922 Bacteria 3214
141 Ga0207646_10150292 3300025922 Bacteria 2100
142 Ga0207646_10258194 3300025922 Bacteria 1575
143 Ga0207646_10308004 3300025922 Unclassified 1431
144 Ga0207694_10000160 3300025924 Bacteria 68770
145 Ga0207694_10034558 3300025924 Bacteria 3877
146 Ga0207664_10091312 3300025929 Unclassified 2497
147 Ga0207664_10246397 3300025929 Bacteria 1558
148 Ga0207667_10003095 3300025949 Bacteria 20587
149 Ga0207667_10030423 3300025949 Bacteria 5841
150 Ga0207640_10004197 3300025981 Bacteria 7793
151 Ga0207639_10000145 3300026041 Bacteria 53212
152 Ga0207639_10016832 3300026041 Bacteria 5179
153 Ga0207678_10045845 3300026067 Bacteria 3780
154 Ga0207702_10153902 3300026078 Bacteria 2094
155 Ga0207674_10028239 3300026116 Bacteria 5924
156 Ga0207674_10063318 3300026116 Bacteria 3733
157 Ga0207698_10000021 3300026142 Bacteria 133280
158 Ga0207698_10000738 3300026142 Bacteria 18978
159 Ga0207698_10294244 3300026142 Bacteria 1508
160 Ga0209588_1000245 3300027671 Bacteria 14476
161 Ga0268266_10003144 3300028379 Bacteria 16769
162 Ga0265336_10028188 3300028666 Bacteria 1755
163 Ga0265338_10001473 3300028800 Bacteria 38143
164 Ga0265328_10006570 3300031239 Bacteria 4901
165 Ga0265320_10001077 3300031240 Bacteria 20158
166 Ga0265320_10013246 3300031240 Bacteria 4750
167 Ga0265339_10001970 3300031249 Bacteria 15092
168 Ga0265316_10005500 3300031344 Bacteria 12300
169 Ga0265314_10000001 3300031711 Bacteria 3792860
170 Ga0265314_10033886 3300031711 Bacteria 3738
171 Ga0265314_10043367 3300031711 Bacteria 3199
172 Ga0265342_10001915 3300031712 Bacteria 18696
173 Ga0265342_10002648 3300031712 Bacteria 15311
174 Ga0316578_10001489 3300031728 Bacteria 9576
175 Ga0307405_10079145 3300031731 Bacteria 2141
176 Ga0316577_10005703 3300031733 Bacteria 6537
177 Ga0307413_10106169 3300031824 Bacteria 1868
178 Ga0307406_10061335 3300031901 Bacteria 2428
179 Ga0307407_10002982 3300031903 Bacteria 6795
180 Ga0307412_10064561 3300031911 Bacteria 2474
181 Ga0307412_10064839 3300031911 Bacteria 2469
182 Ga0307409_100066089 3300031995 Bacteria 2849
183 Ga0307409_100351381 3300031995 Bacteria 1391
184 Ga0307416_100073863 3300032002 Bacteria 2845
185 Ga0307416_100235413 3300032002 Bacteria 1769
186 Ga0307414_10007579 3300032004 Bacteria 6103
187 Ga0307414_10233621 3300032004 Bacteria 1518
188 Ga0307414_10295558 3300032004 Bacteria 1367
189 Ga0307411_10189312 3300032005 Bacteria 1570
190 Ga0307415_100088693 3300032126 Bacteria 2232
191 Ga0307415_100103909 3300032126 Bacteria 2091
192 Ga0316584_0000896 3300036712 Bacteria 16946
193 Ga0373925_0183441 3300037068 Unclassified 1658
194 Ga0395898_0018987 3300037466 Bacteria 7002
195 Ga0395905_0012367 3300037471 Bacteria 8216
196 Ga0395905_0046822 3300037471 Bacteria 4055
197 Ga0395905_0048240 3300037471 Bacteria 3991
198 Ga0395901_0194124 3300038443 Bacteria 2129
199 Ga0400484_07591 3300038725 Bacteria 23418
200 Ga0400488_49010 3300038741 Bacteria 21325
201 Ga0400489_16086 3300039093 Bacteria 3276
202 Ga0400489_58361 3300039093 Bacteria 9982
203 Ga0436365_0674642 3300039437 Bacteria 1888
204 Ga0436360_0486677 3300039438 Bacteria 2652
205 Ga0436361_0433834 3300039447 Bacteria 1265
206 Ga0436363_0834601 3300039450 Bacteria 6944
207 Ga0436363_1277314 3300039450 Bacteria 5047
208 Ga0436362_0945236 3300039453 Bacteria 2597
209 Ga0436362_0970358 3300039453 Bacteria 1848
210 Ga0451793_0625845 3300041452 Bacteria 1271
211 Ga0451807_1185521 3300041486 Bacteria 3700
212 Ga0451577_0066207 3300042876 Bacteria 3223
213 Ga0451577_0087624 3300042876 Bacteria 2777
214 Ga0451577_0378404 3300042876 Bacteria 1285
215 Ga0453683_0000004 3300044673 Bacteria 759456
216 Ga0466966_0007556 3300044684 Bacteria 7201
217 Ga0466963_0011019 3300044694 Bacteria 5496
218 Ga0466964_0153638 3300044706 Bacteria 1069
219 Ga0453684_0012394 3300044712 Bacteria 14072
220 Ga0453684_0015747 3300044712 Bacteria 11907
221 Ga0453684_0274182 3300044712 Bacteria 1926
222 Ga0466959_0067709 3300045049 Bacteria 2588
223 Ga0451576_0000005 3300045051 Bacteria 1294643
224 Ga0466967_0002127 3300045976 Bacteria 12138
225 Ga0495641_0130635 3300046461 Bacteria 1121
226 Ga0495610_0000505 3300046512 Bacteria 39813
227 Ga0495654_0000349 3300046530 Bacteria 39806
228 Ga0495668_0044156 3300046616 Bacteria 2477
229 Ga0495604_0274209 3300047317 Bacteria 1142
230 Ga0496112_0137797 3300048915 Bacteria 2410
231 Ga0496112_0384062 3300048915 Bacteria 1345
232 Ga0501033_0029314 3300049570 Bacteria 4136
233 Ga0501034_0142646 3300049571 Bacteria 2374
234 Ga0501036_0265414 3300049572 Unclassified 1438
235 Ga0501038_0214880 3300049574 Bacteria 1537
236 Ga0501040_0011538 3300049576 Bacteria 5784
237 Ga0501041_0126623 3300049577 Bacteria 1590
238 Ga0501046_0217504 3300049580 Bacteria 1416
239 Ga0501047_0176262 3300049581 Bacteria 2005
240 Ga0501068_0106678 3300049584 Bacteria 1739
241 Ga0501071_0071653 3300049587 Unclassified 2527
242 Ga0501073_0223323 3300049589 Bacteria 1301
243 Ga0501074_0060598 3300049590 Bacteria 2727
244 Ga0501074_0235254 3300049590 Bacteria 1304
245 Ga0501075_0025715 3300049591 Unclassified 4326
246 Ga0501077_0002401 3300049593 Bacteria 11235
247 Ga0501077_0054932 3300049593 Unclassified 2529
248 Ga0501239_002994 3300049672 Bacteria 1576
249 Ga0501247_002231 3300049677 Bacteria 1996
250 Ga0501079_0018525 3300049741 Bacteria 5319
251 Ga0501079_0086992 3300049741 Unclassified 2419
252 Ga0501080_0062801 3300049742 Bacteria 3457
253 Ga0501081_0010464 3300049743 Bacteria 6052
254 Ga0501083_0001353 3300049744 Bacteria 16651
255 Ga0501083_0009893 3300049744 Bacteria 6732
256 Ga0501044_0160577 3300049823 Bacteria 2225
257 nmdc:mga0k408_59561_c1 3300050493 Bacteria 2218
258 nmdc:mga05p37_50940_c1 3300050507 Bacteria 5092
259 nmdc:mga0qj67_149268_c1 3300050509 Bacteria 1896
260 nmdc:mga0n895_210644_c1 3300050512 Archaea 1974
261 nmdc:mga0n895_272235_c1 3300050512 Bacteria 1718
262 nmdc:mga0rr50_15427_c1 3300050513 Archaea 5044
263 nmdc:mga0rr50_432865_c1 3300050513 Bacteria 1114
264 nmdc:mga0rr50_69181_c1 3300050513 Bacteria 2686
265 nmdc:mga08x19_16792_c1 3300050514 Archaea 4470
266 nmdc:mga0a205_21009_c1 3300050515 Bacteria 6171
267 nmdc:mga0a205_67303_c1 3300050515 Bacteria 3460
268 Ga0500568_0005001 3300053139 Bacteria 6949
269 Ga0501084_0030527 3300054114 Bacteria 4506
270 Ga0590071_000919 3300059421 Bacteria 8163
271 Ga0590071_014695 3300059421 Bacteria 1836
272 Ga0590075_015106 3300059424 Bacteria 1893
273 Ga0587073_0000692 3300059492 Bacteria 3350
274 Ga0587128_002935 3300059630 Bacteria 1835
275 Ga0587075_001947 3300059644 Bacteria 2107
276 Ga0501082_0010513 3300060353 Bacteria 7962
277 Ga0501082_0013877 3300060353 Bacteria 6927
278 Ga0501082_0218725 3300060353 Bacteria 1657
279 Ga0501082_0288674 3300060353 Unclassified 1428
280 2599104091 2597490356 Bacteria 7030811
281 2844535505 2844533157 Bacteria 7517899
282 2846957131 2846952575 Bacteria 6587527
283 2848863136 2848858292 Bacteria 7391279
284 2919688639 2919688452 Bacteria 4595932
285 Ga0453684_0050784
286 JGI25406J46586_10044098
287 rootH1_10023399
288 rootH2_10097131
289 rootH2_10184369
290 rootH1_10002435
291 Ga0070683_100039535
292 Ga0070682_100001983
293 Ga0070660_100003977
294 Ga0070709_10002737
295 Ga0070714_100021765
296 Ga0070714_100085991
297 Ga0070708_100000433
298 Ga0070708_100000586
299 Ga0070708_100017642
300 Ga0070708_100023897
301 Ga0070708_100037662
302 Ga0070708_100152792
303 Ga0070681_10005357
304 Ga0070706_100000041
305 Ga0070706_100000219
306 Ga0070706_100000370
307 Ga0070706_100003803
308 Ga0070706_100029867
309 Ga0070706_100345549
310 Ga0070707_100000070
311 Ga0070707_100000433
312 Ga0070707_100004269
313 Ga0070707_100038873
314 Ga0070707_100041269
315 Ga0070707_100044123
316 Ga0070707_100047394
317 Ga0070707_100198179
318 Ga0070707_100308044
319 Ga0070698_100004065
320 Ga0070698_100005863
321 Ga0070698_100006432
322 Ga0070698_100010537
323 Ga0070698_100021790
324 Ga0070699_100000078
325 Ga0070699_100000080
326 Ga0070699_100000501
327 Ga0070699_100004155
328 Ga0070699_100023216
329 Ga0070699_100036807
330 Ga0070699_100110425
331 Ga0070679_100058742
332 Ga0070679_100127863
333 Ga0070684_100038437
334 Ga0070697_100000057
335 Ga0070697_100003598
336 Ga0070697_100003699
337 Ga0070697_100039338
338 Ga0070697_100061433
339 Ga0070697_100143848
340 Ga0068853_100000645
341 Ga0070695_100003438
342 Ga0070695_100031654
343 Ga0070704_100004832
344 Ga0068855_100017874
345 Ga0068855_100058295
346 Ga0068855_100058558
347 Ga0068857_100018923
348 Ga0068854_100007202
349 Ga0068854_100027922
350 Ga0068856_100031262
351 Ga0068852_100000027
352 Ga0068852_100167674
353 Ga0068851_10105121
354 Ga0068863_100125454
355 Ga0081539_10000043
356 Ga0081539_10000499
357 Ga0070717_10000214
358 Ga0070717_10002666
359 Ga0070717_10511402
360 Ga0070716_100138627
361 Ga0070712_100217305
362 Ga0075366_10023094
363 Ga0075428_100054541
364 Ga0075428_100495799
365 Ga0075433_10015884
366 Ga0075433_10058512
367 Ga0075434_100059028
368 Ga0075434_100254712
369 Ga0075436_100000855
370 Ga0075436_100124927
371 Ga0075436_100220605
372 Ga0075435_100017636
373 Ga0099794_10000067
374 Ga0099794_10000919
375 Ga0105240_10000222
376 Ga0105240_10015500
377 Ga0114129_10009187
378 Ga0114129_10360338
379 Ga0105241_10000074
380 Ga0105237_10004817
381 Ga0105237_10093459
382 Ga0105238_10010605
383 Ga0157370_10001610
384 Ga0157369_10000112
385 Ga0157372_10001211
386 Ga0157372_10035987
387 Ga0157372_10641521
388 Ga0206349_1661212
389 Ga0206352_10708427
390 Ga0206350_10331461
391 Ga0213873_10023008
392 Ga0213874_10009771
393 Ga0213876_10073875
394 Ga0213871_10018053
395 Ga0224712_10005347
396 Ga0207705_10094528
397 Ga0207684_10000002
398 Ga0207684_10000010
399 Ga0207684_10000020
400 Ga0207684_10000200
401 Ga0207684_10058991
402 Ga0207684_10217597
403 Ga0207654_10000380
404 Ga0207654_10003672
405 Ga0207707_10035873
406 Ga0207695_10000028
407 Ga0207695_10003411
408 Ga0207695_10060802
409 Ga0207695_10142002
410 Ga0207671_10003647
411 Ga0207671_10064909
412 Ga0207657_10004341
413 Ga0207649_10059508
414 Ga0207652_10028766
415 Ga0207652_10242375
416 Ga0207646_10000051
417 Ga0207646_10000093
418 Ga0207646_10000190
419 Ga0207646_10000266
420 Ga0207646_10000853
421 Ga0207646_10001455
422 Ga0207646_10007575
423 Ga0207646_10066669
424 Ga0207646_10150292
425 Ga0207646_10258194
426 Ga0207646_10308004
427 Ga0207694_10000160
428 Ga0207694_10034558
429 Ga0207664_10091312
430 Ga0207664_10246397
431 Ga0207667_10003095
432 Ga0207667_10030423
433 Ga0207640_10004197
434 Ga0207639_10000145
435 Ga0207639_10016832
436 Ga0207678_10045845
437 Ga0207702_10153902
438 Ga0207674_10028239
439 Ga0207674_10063318
440 Ga0207698_10000021
441 Ga0207698_10000738
442 Ga0207698_10294244
443 Ga0209588_1000245
444 Ga0268266_10003144
445 Ga0265336_10028188
446 Ga0265338_10001473
447 Ga0265328_10006570
448 Ga0265320_10001077
449 Ga0265320_10013246
450 Ga0265339_10001970
451 Ga0265316_10005500
452 Ga0265314_10000001
453 Ga0265314_10033886
454 Ga0265314_10043367
455 Ga0265342_10001915
456 Ga0265342_10002648
457 Ga0316578_10001489
458 Ga0307405_10079145
459 Ga0316577_10005703
460 Ga0307413_10106169
461 Ga0307406_10061335
462 Ga0307407_10002982
463 Ga0307412_10064561
464 Ga0307412_10064839
465 Ga0307409_100066089
466 Ga0307409_100351381
467 Ga0307416_100073863
468 Ga0307416_100235413
469 Ga0307414_10007579
470 Ga0307414_10233621
471 Ga0307414_10295558
472 Ga0307411_10189312
473 Ga0307415_100088693
474 Ga0307415_100103909
475 Ga0316584_0000896
476 Ga0373925_0183441
477 Ga0395898_0018987
478 Ga0395905_0012367
479 Ga0395905_0046822
480 Ga0395905_0048240
481 Ga0395901_0194124
482 Ga0400484_07591
483 Ga0400488_49010
484 Ga0400489_16086
485 Ga0400489_58361
486 Ga0436365_0674642
487 Ga0436360_0486677
488 Ga0436361_0433834
489 Ga0436363_0834601
490 Ga0436363_1277314
491 Ga0436362_0945236
492 Ga0436362_0970358
493 Ga0451793_0625845
494 Ga0451807_1185521
495 Ga0451577_0066207
496 Ga0451577_0087624
497 Ga0451577_0378404
498 Ga0453683_0000004
499 Ga0466966_0007556
500 Ga0466963_0011019
501 Ga0466964_0153638
502 Ga0453684_0012394
503 Ga0453684_0015747
504 Ga0453684_0274182
505 Ga0466959_0067709
506 Ga0451576_0000005
507 Ga0466967_0002127
508 Ga0495641_0130635
509 Ga0495610_0000505
510 Ga0495654_0000349
511 Ga0495668_0044156
512 Ga0495604_0274209
513 Ga0496112_0137797
514 Ga0496112_0384062
515 Ga0501033_0029314
516 Ga0501034_0142646
517 Ga0501036_0265414
518 Ga0501038_0214880
519 Ga0501040_0011538
520 Ga0501041_0126623
521 Ga0501046_0217504
522 Ga0501047_0176262
523 Ga0501068_0106678
524 Ga0501071_0071653
525 Ga0501073_0223323
526 Ga0501074_0060598
527 Ga0501074_0235254
528 Ga0501075_0025715
529 Ga0501077_0002401
530 Ga0501077_0054932
531 Ga0501239_002994
532 Ga0501247_002231
533 Ga0501079_0018525
534 Ga0501079_0086992
535 Ga0501080_0062801
536 Ga0501081_0010464
537 Ga0501083_0001353
538 Ga0501083_0009893
539 Ga0501044_0160577
540 nmdc:mga0k408_59561_c1
541 nmdc:mga05p37_50940_c1
542 nmdc:mga0qj67_149268_c1
543 nmdc:mga0n895_210644_c1
544 nmdc:mga0n895_272235_c1
545 nmdc:mga0rr50_15427_c1
546 nmdc:mga0rr50_432865_c1
547 nmdc:mga0rr50_69181_c1
548 nmdc:mga08x19_16792_c1
549 nmdc:mga0a205_21009_c1
550 nmdc:mga0a205_67303_c1
551 Ga0500568_0005001
552 Ga0501084_0030527
553 Ga0590071_000919
554 Ga0590071_014695
555 Ga0590075_015106
556 Ga0587073_0000692
557 Ga0587128_002935
558 Ga0587075_001947
559 Ga0501082_0010513
560 Ga0501082_0013877
561 Ga0501082_0218725
562 Ga0501082_0288674
563 2599104091
564 2844535505
565 2846957131
566 2848863136
567 2919688639

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

10

114

0.92

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

12

273

0.91

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

13

338

0.84

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

12

137

0.83

PF04321

RmlD_sub_bind

RmlD substrate binding domain

10

275

0.82

PF07993

NAD_binding_4

Male sterility protein

14

255

0.81

PF08659

KR

KR domain

10

168

0.77

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

13

273

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
1orr-assembly1.cif.gz_A crystal structure of cdp-tyvelose 2-epimerase complexed with nad and cdp 0.9694 1 333
1orr-assembly2.cif.gz_D crystal structure of cdp-tyvelose 2-epimerase complexed with nad and cdp 0.9653 1 333
1orr-assembly3.cif.gz_C crystal structure of cdp-tyvelose 2-epimerase complexed with nad and cdp 0.9642 1 333
1orr-assembly3.cif.gz_C crystal structure of cdp-tyvelose 2-epimerase complexed with nad and cdp 0.9558 1 333
1orr-assembly2.cif.gz_D crystal structure of cdp-tyvelose 2-epimerase complexed with nad and cdp 0.954 1 333
ID Description Score Start End Superfamily
1orrD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9653 1 333 3.40.50.720
1orrD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.954 1 333 3.40.50.720
af_P72050_1_314_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9302 1 333 3.40.50.720
6dntA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9227 2 261 3.40.50.720
af_Q2G289_4_319_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9143 2 339 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V7YDQ2-F1-model_v4 CDP-paratose 2-epimerase 0.9865 2 248
AF-A0A7V8VVF4-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9862 2 310
AF-A0A848LGR0-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9849 2 337
AF-A0A3D5E570-F1-model_v4 CDP-paratose 2-epimerase 0.9848 19 337
AF-A0A533ZUN3-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9847 58 337

Map