F386503

General Info

Members Datasets Scaffolds Average Seq Length
284 250 144 381

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2925326138|2925326432
Length 392
Sequence TIRFGVIGCGLMGKEFASAAARWCHLTGVDFEPRITAVCDANPAAAEWFKAYVPSVTKTTTDYRELLADPDIDAVYCAVPHNLHADLYIDIIRAGKHLLGEKPFGIDRSANDRIMAEMAKFPDVLVRCSSEFPFFPGAYRIGEWVREGRFGKIIEVEAGFWHSSDLDPLKPINWKRRIATNGEYGCMGDLGMHVLHLPLRFGWQPNSVRALLQKTVDERPDGKGGNVPCETWDNAILACDVNNDLGKFPMVLSMKRIAPGHANTWFIRINGTELSAEYTTKNPKEIRSLPYKPGGEQAWHTLDVPYQSAYSTITGGIFEFGFSDSILQMWAAFCDELVNRDHMKQPLHCATPEEAAGSHKLFTAALESDRTGQTVHIGGRDSFAASARPTGA

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
3 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
4 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
5 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
6 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
7 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
8 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
9 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
10 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
11 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
12 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
13 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
14 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
15 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
16 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
17 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
18 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
19 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
20 2524023209 Rhizobium leucaenae USDA 9039 Isolate Nodule
21 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
22 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
23 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
24 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
25 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
26 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
27 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
28 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
29 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
30 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
31 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
32 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
33 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
34 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
35 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
36 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
37 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
38 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
39 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
40 2643221719 Rhizobium sp. Root274 Isolate Unclassified
41 2718217927 Rhizobium sp. N324 Isolate Nodule
42 2718218423 Rhizobium sp. N941 Isolate Nodule
43 2721755809 Rhizobium sp. N541 Isolate Nodule
44 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
45 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
46 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
47 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
48 2791355263 Rhizobium chutanense C5 Isolate Nodule
49 2791355266 Rhizobium sp. L43 Isolate Nodule
50 2791355267 Rhizobium sp. L18 Isolate Nodule
51 2802429633 Rhizobium anhuiense J3 Isolate Nodule
52 2802429634 Rhizobium anhuiense S10 Isolate Nodule
53 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
54 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
55 2802429637 Rhizobium anhuiense C15 Isolate Nodule
56 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
57 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
58 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
59 2818991459 Paenibacillus sp. 597 Isolate Unclassified
60 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
61 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
62 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
63 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
64 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
65 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
66 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
67 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
68 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
69 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
70 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
71 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
72 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
73 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
74 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
75 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
76 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
77 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
78 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
79 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
80 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
81 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
82 2842298080 Rhizobium leucaenae SEMIA 492 Isolate Nodule
83 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
84 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
85 2842357229 Rhizobium leucaenae SEMIA 4015 Isolate Nodule
86 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
87 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
88 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
89 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
90 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
91 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
92 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
93 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
94 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
95 2857472729 Cohnella sp. R-74144 Isolate Unclassified
96 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
97 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
98 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
99 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
100 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
101 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
102 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
103 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
104 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
105 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
106 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
107 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
108 2936381700 Rhizobium chutanense C16 Isolate Unclassified
109 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
110 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
111 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
112 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
113 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
114 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
115 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
116 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
117 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
118 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
119 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
120 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
121 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
122 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
123 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
124 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
125 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
126 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
127 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
128 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
129 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
130 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
131 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
132 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
133 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
134 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
135 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
136 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
137 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
138 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
139 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
140 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
141 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
142 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
143 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
144 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
145 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
146 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
147 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
148 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
149 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
150 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
151 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
152 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
153 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
154 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
155 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
156 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
157 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
158 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
159 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
160 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
161 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
162 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
163 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
164 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
165 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
166 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
167 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
168 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
169 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
170 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
171 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
172 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
173 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
174 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
175 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
176 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
177 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
178 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
180 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
181 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
182 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
183 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
184 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
185 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
186 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
187 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
188 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
189 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
190 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
191 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
192 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
193 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
194 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
195 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
196 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
197 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
198 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
199 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
200 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
201 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
202 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
203 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
204 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
205 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
206 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
207 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
208 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
209 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
210 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
211 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
212 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
213 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
214 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
215 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
216 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
217 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
218 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
219 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
220 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
221 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
222 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
223 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
224 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
225 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
226 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
227 8005275841 Rhizobium sp. N4311 Isolate Nodule
228 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
229 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
230 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
231 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
232 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
233 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
234 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
235 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
236 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
237 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
238 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
239 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
240 8018176218 Rhizobium sp. N122 Isolate Nodule
241 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
242 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
243 8046767195 Rhizobium calliandrae CCGE524 Isolate Unclassified
244 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
245 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
246 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
247 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
248 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
249 8057575449 Rhizobium mayense CCGE526 Isolate Nodule
250 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 50.7
Metatranscriptomes 0
Isolates 49.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.51
Nodule 32.04
Rhizoplane 0.7
Rhizosphere 36.62
Stem 0
Stem Tuber 0
Unclassified 21.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1012449 3300002773 Bacteria 1824
2 JGI25151J46595_10000711 3300003187 Bacteria 27887
3 JGI25153J46596_10004152 3300003215 Bacteria 7867
4 rootH2_10060592 3300003320 Bacteria 12396
5 rootL2_10020350 3300003322 Bacteria 27043
6 rootH1_10076033 3300003323 Bacteria 4640
7 JGI25160J50197_1000625 3300003354 Bacteria 19742
8 Ga0055526_1011350 3300003771 Bacteria 4022
9 Ga0055543_1000602 3300004625 Bacteria 19499
10 Ga0070709_10007871 3300005434 Bacteria 5853
11 Ga0070713_100008687 3300005436 Bacteria 7224
12 Ga0070706_100000626 3300005467 Bacteria 40653
13 Ga0070706_100173780 3300005467 Bacteria 2011
14 Ga0070698_100009426 3300005471 Bacteria 10459
15 Ga0070698_100223476 3300005471 Bacteria 1816
16 Ga0070699_100018503 3300005518 Bacteria 5983
17 Ga0070679_100009563 3300005530 Bacteria 9168
18 Ga0070697_100187788 3300005536 Bacteria 1753
19 Ga0068853_100135760 3300005539 Bacteria 2205
20 Ga0068857_100015194 3300005577 Bacteria 6718
21 Ga0068854_100073199 3300005578 Bacteria 2510
22 Ga0070717_10326055 3300006028 Bacteria 1369
23 Ga0075365_10022104 3300006038 Bacteria 3980
24 Ga0075368_10032709 3300006042 Bacteria 2021
25 Ga0075364_10032222 3300006051 Bacteria 3368
26 Ga0075362_10092093 3300006177 Bacteria 1408
27 Ga0075370_10030557 3300006353 Bacteria 3006
28 Ga0075428_100064553 3300006844 Bacteria 4010
29 Ga0075434_100135397 3300006871 Bacteria 2483
30 Ga0105240_10000028 3300009093 Bacteria 347789
31 Ga0105240_10000097 3300009093 Bacteria 179135
32 Ga0111539_10004434 3300009094 Bacteria 18339
33 Ga0114129_10032876 3300009147 Bacteria 7329
34 Ga0114129_10080675 3300009147 Bacteria 4522
35 Ga0105243_10038285 3300009148 Unclassified 3734
36 Ga0105243_10146993 3300009148 Unclassified 2018
37 Ga0105237_10000085 3300009545 Bacteria 125535
38 Ga0105237_10001265 3300009545 Bacteria 33727
39 Ga0105237_10009920 3300009545 Bacteria 10160
40 Ga0105237_10345306 3300009545 Bacteria 1493
41 Ga0105238_10021915 3300009551 Bacteria 6509
42 Ga0123341_1000030 3300009765 Bacteria 66251
43 Ga0123342_1008451 3300009766 Bacteria 12940
44 Ga0105239_10000667 3300010375 Bacteria 48857
45 Ga0105239_10135330 3300010375 Bacteria 2743
46 Ga0105239_10516583 3300010375 Bacteria 1359
47 Ga0157370_10006291 3300013104 Bacteria 13136
48 Ga0157369_10128901 3300013105 Bacteria 2681
49 Ga0157378_10218003 3300013297 Bacteria 1813
50 Ga0157372_10550285 3300013307 Bacteria 1345
51 Ga0182007_10019819 3300015262 Bacteria 2412
52 Ga0182005_1002511 3300015265 Bacteria 6514
53 Ga0213873_10006317 3300021358 Unclassified 2325
54 Ga0213872_10001838 3300021361 Bacteria 13150
55 Ga0213872_10025948 3300021361 Bacteria 2692
56 Ga0213876_10001961 3300021384 Bacteria 12322
57 Ga0213871_10005516 3300021441 Bacteria 2615
58 Ga0209566_100095 3300025225 Bacteria 135895
59 Ga0209672_108181 3300025228 Bacteria 1565
60 Ga0209563_105493 3300025230 Bacteria 2291
61 Ga0207425_1002922 3300025245 Bacteria 5723
62 Ga0209677_101053 3300025253 Bacteria 13097
63 Ga0209129_1000544 3300025258 Bacteria 26136
64 Ga0209233_1000218 3300025261 Bacteria 105353
65 Ga0209025_1000574 3300025294 Bacteria 66723
66 Ga0209758_1001183 3300025297 Bacteria 33014
67 Ga0209758_1018154 3300025297 Bacteria 3464
68 Ga0209050_1014744 3300025298 Bacteria 3339
69 Ga0209256_1002434 3300025299 Bacteria 15218
70 Ga0207426_1000931 3300025302 Bacteria 29195
71 Ga0209051_1000733 3300025303 Bacteria 35473
72 Ga0209257_1019137 3300025304 Bacteria 2594
73 Ga0207699_10033719 3300025906 Bacteria 2896
74 Ga0207684_10001294 3300025910 Bacteria 27535
75 Ga0207684_10004660 3300025910 Bacteria 12875
76 Ga0207695_10000187 3300025913 Bacteria 179183
77 Ga0207695_10000602 3300025913 Bacteria 72095
78 Ga0207671_10000111 3300025914 Bacteria 125622
79 Ga0207671_10030783 3300025914 Bacteria 4000
80 Ga0207671_10097648 3300025914 Bacteria 2221
81 Ga0207694_10009888 3300025924 Bacteria 7198
82 Ga0207700_10088620 3300025928 Bacteria 2437
83 Ga0207709_10175326 3300025935 Bacteria 1509
84 Ga0207639_10063018 3300026041 Bacteria 2869
85 Ga0207641_10127450 3300026088 Unclassified 2281
86 Ga0209371_1002338 3300027312 Bacteria 10784
87 Ga0268264_10190562 3300028381 Unclassified 1869
88 Ga0307515_10076453 3300028794 Unclassified 4441
89 Ga0268256_1002076 3300030500 Bacteria 10784
90 Ga0265314_10000461 3300031711 Bacteria 54181
91 Ga0265314_10004871 3300031711 Bacteria 12270
92 Ga0436364_0156062 3300037853 Unclassified 3167
93 Ga0436364_0384623 3300037853 Bacteria 3391
94 Ga0436365_0048297 3300039437 Bacteria 33965
95 Ga0436365_0602329 3300039437 Unclassified 3175
96 Ga0436360_0144335 3300039438 Bacteria 1466
97 Ga0436360_0687236 3300039438 Bacteria 4047
98 Ga0436361_0026031 3300039447 Bacteria 1954
99 Ga0436361_0614392 3300039447 Bacteria 4260
100 Ga0436361_0616847 3300039447 Bacteria 5170
101 Ga0436361_0710165 3300039447 Bacteria 7738
102 Ga0436363_0079116 3300039450 Bacteria 23818
103 Ga0436362_1026501 3300039453 Bacteria 2451
104 Ga0451787_409637 3300041441 Bacteria 2524
105 Ga0451833_1484565 3300041491 Bacteria 2114
106 Ga0451839_0437753 3300041496 Bacteria 2984
107 Ga0451845_0200587 3300041501 Bacteria 2401
108 Ga0451851_0802466 3300041507 Bacteria 2237
109 Ga0451855_0100982 3300041511 Bacteria 2830
110 Ga0451577_0258865 3300042876 Bacteria 1576
111 Ga0453683_0000707 3300044673 Bacteria 34550
112 Ga0453683_0008406 3300044673 Bacteria 6929
113 Ga0453684_0032012 3300044712 Bacteria 7375
114 Ga0453684_0035291 3300044712 Bacteria 6916
115 Ga0453684_0372222 3300044712 Bacteria 1606
116 Ga0453684_0468888 3300044712 Bacteria 1399
117 Ga0451576_0022936 3300045051 Bacteria 6764
118 Ga0451576_0158371 3300045051 Unclassified 2362
119 Ga0466967_0335584 3300045976 Bacteria 1461
120 Ga0496112_0269271 3300048915 Bacteria 1652
121 Ga0496116_0066268 3300048919 Bacteria 2311
122 Ga0496116_0073287 3300048919 Bacteria 2160
123 Ga0496117_0004996 3300048920 Bacteria 14228
124 Ga0496117_0010475 3300048920 Bacteria 8443
125 Ga0496118_0024407 3300048921 Bacteria 5217
126 Ga0496118_0075894 3300048921 Bacteria 2393
127 Ga0496119_0067859 3300048922 Bacteria 2101
128 Ga0496120_0008400 3300048923 Bacteria 7497
129 Ga0496120_0023899 3300048923 Bacteria 3819
130 Ga0496121_0000005 3300048924 Bacteria 1034486
131 Ga0496121_0000084 3300048924 Bacteria 225942
132 Ga0496122_0039774 3300048925 Bacteria 3745
133 Ga0496122_0144244 3300048925 Bacteria 1483
134 Ga0496123_0051925 3300048926 Bacteria 2725
135 Ga0496124_0025945 3300048927 Bacteria 5294
136 Ga0496125_0000159 3300048928 Bacteria 151205
137 Ga0496126_0049755 3300048929 Bacteria 3824
138 Ga0501037_0003445 3300049573 Bacteria 11493
139 Ga0501047_0014107 3300049581 Bacteria 7594
140 Ga0501044_0001184 3300049823 Bacteria 30897
141 nmdc:mga00v17_3733_c1 3300050491 Bacteria 7861
142 nmdc:mga05p37_20728_c1 3300050507 Bacteria 7955
143 nmdc:mga08y16_27534_c1 3300050511 Bacteria 5988
144 Ga0466962_0070384 3300061719 Bacteria 1671

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10000028 Ga0105240_1000002839 348
2 3300025913 Ga0207695_10000602 Ga0207695_1000060224 348
3 3300039447 Ga0436361_0026031 Ga0436361_0026031_42_1172 348
4 3300005518 Ga0070699_100018503 Ga0070699_1000185033 357
5 3300005539 Ga0068853_100135760 Ga0068853_1001357602 357
6 3300006028 Ga0070717_10326055 Ga0070717_103260551 357
7 3300010375 Ga0105239_10135330 Ga0105239_101353302 357
8 3300026041 Ga0207639_10063018 Ga0207639_100630182 357
9 3300009545 Ga0105237_10345306 Ga0105237_103453061 359
10 3300009551 Ga0105238_10021915 Ga0105238_100219152 360
11 3300025924 Ga0207694_10009888 Ga0207694_100098886 360
12 3300031711 Ga0265314_10000461 Ga0265314_1000046115 360
13 3300009545 Ga0105237_10000085 Ga0105237_100000853 361
14 3300025914 Ga0207671_10000111 Ga0207671_1000011188 361
15 3300050511 nmdc:mga08y16_27534_c1 nmdc:mga08y16_27534_c1_3142_4242 362
16 3300048925 Ga0496122_0144244 Ga0496122_0144244_248_1414 365
17 3300028794 Ga0307515_10076453 Ga0307515_100764532 366
18 3300042876 Ga0451577_0258865 Ga0451577_0258865_332_1462 368
19 3300025910 Ga0207684_10001294 Ga0207684_100012947 369
20 3300039437 Ga0436365_0602329 Ga0436365_0602329_31_1152 369
21 3300039438 Ga0436360_0144335 Ga0436360_0144335_113_1243 371
22 3300021441 Ga0213871_10005516 Ga0213871_100055163 372
23 3300037853 Ga0436364_0156062 Ga0436364_0156062_1813_2946 373
24 3300005536 Ga0070697_100187788 Ga0070697_1001877882 374
25 3300039450 Ga0436363_0079116 Ga0436363_0079116_8748_9890 375
26 3300044673 Ga0453683_0000707 Ga0453683_0000707_28166_29311 375
27 3300044712 Ga0453684_0032012 Ga0453684_0032012_2057_3202 375
28 iso_pu_bacteria 2643221653 2644300547 375
29 iso_pu_bacteria 2643221719 2644658888 375
30 iso_pu_bacteria 2818991272 2819243520 375
31 iso_pu_bacteria 2989776772 2989781102 375
32 iso_pu_bacteria 8005246636 8005251408 375
33 3300005467 Ga0070706_100000626 Ga0070706_10000062636 376
34 3300005467 Ga0070706_100173780 Ga0070706_1001737802 376
35 3300005471 Ga0070698_100009426 Ga0070698_10000942612 376
36 3300005471 Ga0070698_100223476 Ga0070698_1002234761 376
37 3300006844 Ga0075428_100064553 Ga0075428_1000645532 376
38 3300006871 Ga0075434_100135397 Ga0075434_1001353973 376
39 3300009094 Ga0111539_10004434 Ga0111539_100044349 376
40 3300009147 Ga0114129_10032876 Ga0114129_100328766 376
41 3300009148 Ga0105243_10146993 Ga0105243_101469932 376
42 3300021384 Ga0213876_10001961 Ga0213876_100019613 376
43 3300025910 Ga0207684_10004660 Ga0207684_100046605 376
44 3300025935 Ga0207709_10175326 Ga0207709_101753261 376
45 3300039437 Ga0436365_0048297 Ga0436365_0048297_18940_20085 376
46 3300044712 Ga0453684_0035291 Ga0453684_0035291_3535_4680 376
47 3300045051 Ga0451576_0022936 Ga0451576_0022936_702_1847 376
48 3300045051 Ga0451576_0158371 Ga0451576_0158371_800_1945 376
49 3300048915 Ga0496112_0269271 Ga0496112_0269271_287_1435 376
50 3300050507 nmdc:mga05p37_20728_c1 nmdc:mga05p37_20728_c1_6327_7472 376
51 iso_pu_bacteria 8057473075 8057473265 376
52 3300031711 Ga0265314_10004871 Ga0265314_1000487110 377
53 3300044712 Ga0453684_0468888 Ga0453684_0468888_230_1375 377
54 iso_pu_bacteria 2585428059 2587739310 377
55 iso_pu_bacteria 2643221676 2644426334 377
56 iso_pu_bacteria 2818991459 2819670991 377
57 iso_pu_bacteria 2888578766 2888580029 377
58 iso_pu_bacteria 2889049205 2889051360 377
59 iso_pu_bacteria 2904113452 2904116489 377
60 iso_pu_bacteria 2971410472 2971413732 377
61 iso_pu_bacteria 8054795415 8054799414 377
62 iso_pu_bacteria 8056533031 8056538896 377
63 3300005530 Ga0070679_100009563 Ga0070679_1000095634 378
64 3300005577 Ga0068857_100015194 Ga0068857_1000151943 378
65 3300009148 Ga0105243_10038285 Ga0105243_100382852 378
66 3300009545 Ga0105237_10001265 Ga0105237_100012659 378
67 3300010375 Ga0105239_10516583 Ga0105239_105165832 378
68 3300025914 Ga0207671_10097648 Ga0207671_100976481 378
69 3300028381 Ga0268264_10190562 Ga0268264_101905622 378
70 3300044673 Ga0453683_0008406 Ga0453683_0008406_259_1407 378
71 3300044712 Ga0453684_0372222 Ga0453684_0372222_403_1554 378
72 3300005434 Ga0070709_10007871 Ga0070709_100078714 379
73 3300013105 Ga0157369_10128901 Ga0157369_101289013 379
74 3300013307 Ga0157372_10550285 Ga0157372_105502851 379
75 3300021358 Ga0213873_10006317 Ga0213873_100063172 379
76 3300021361 Ga0213872_10001838 Ga0213872_1000183810 379
77 3300021361 Ga0213872_10025948 Ga0213872_100259482 379
78 3300025906 Ga0207699_10033719 Ga0207699_100337192 379
79 3300025928 Ga0207700_10088620 Ga0207700_100886201 379
80 3300026088 Ga0207641_10127450 Ga0207641_101274502 379
81 3300037853 Ga0436364_0384623 Ga0436364_0384623_1059_2216 379
82 3300039438 Ga0436360_0687236 Ga0436360_0687236_2268_3425 379
83 3300039447 Ga0436361_0614392 Ga0436361_0614392_553_1710 379
84 3300039447 Ga0436361_0616847 Ga0436361_0616847_3976_5127 379
85 3300039447 Ga0436361_0710165 Ga0436361_0710165_1448_2605 379
86 3300039453 Ga0436362_1026501 Ga0436362_1026501_443_1594 379
87 iso_pu_bacteria 2857453340 2857456303 379
88 iso_pu_bacteria 2929138655 2929142973 379
89 iso_pu_bacteria 2980182181 2980186880 379
90 iso_pu_bacteria 3000405567 3000407054 379
91 iso_pu_bacteria 8002317523 8002322442 379
92 iso_pu_bacteria 8046991243 8046995025 379
93 3300009147 Ga0114129_10080675 Ga0114129_100806753 380
94 3300025225 Ga0209566_100095 Ga0209566_10009531 380
95 3300048919 Ga0496116_0073287 Ga0496116_0073287_241_1398 380
96 iso_pu_bacteria 2509276021 2509388552 380
97 iso_pu_bacteria 2509276033 2509444103 380
98 iso_pu_bacteria 2510065019 2510131300 380
99 iso_pu_bacteria 2510461076 2510897643 380
100 iso_pu_bacteria 2510917022 2511136402 380
101 iso_pu_bacteria 2513237084 2513570517 380
102 iso_pu_bacteria 2513237085 2513580345 380
103 iso_pu_bacteria 2513237093 2513634127 380
104 iso_pu_bacteria 2513237103 2513707086 380
105 iso_pu_bacteria 2513237162 2514020371 380
106 iso_pu_bacteria 2515075009 2515110245 380
107 iso_pu_bacteria 2515154113 2515634450 380
108 iso_pu_bacteria 2515154114 2515643675 380
109 iso_pu_bacteria 2515154116 2515657073 380
110 iso_pu_bacteria 2515154134 2515743431 380
111 iso_pu_bacteria 2516653077 2517038928 380
112 iso_pu_bacteria 2516653085 2517079193 380
113 iso_pu_bacteria 2517093000 2517093117 380
114 iso_pu_bacteria 2517287029 2517409402 380
115 iso_pu_bacteria 2524023209 2524459913 380
116 iso_pu_bacteria 2529292951 2530647931 380
117 iso_pu_bacteria 2582581307 2585274769 380
118 iso_pu_bacteria 2582581308 2585277980 380
119 iso_pu_bacteria 2582581315 2585326929 380
120 iso_pu_bacteria 2582581316 2585332602 380
121 iso_pu_bacteria 2585427526 2585529392 380
122 iso_pu_bacteria 2585427527 2585533157 380
123 iso_pu_bacteria 2585427528 2585539559 380
124 iso_pu_bacteria 2585427530 2585557783 380
125 iso_pu_bacteria 2585427531 2585562135 380
126 iso_pu_bacteria 2585427593 2585837516 380
127 iso_pu_bacteria 2585427608 2585899698 380
128 iso_pu_bacteria 2585427609 2585907881 380
129 iso_pu_bacteria 2585428125 2587983301 380
130 iso_pu_bacteria 2615840626 2616309098 380
131 iso_pu_bacteria 2615840698 2616552999 380
132 iso_pu_bacteria 2718217927 2719384009 380
133 iso_pu_bacteria 2718218423 2721397779 380
134 iso_pu_bacteria 2721755809 2724036589 380
135 iso_pu_bacteria 2724679232 2725948868 380
136 iso_pu_bacteria 2738541333 2739036948 380
137 iso_pu_bacteria 2765235942 2766062790 380
138 iso_pu_bacteria 2791355259 2793316445 380
139 iso_pu_bacteria 2791355263 2793341923 380
140 iso_pu_bacteria 2791355266 2793361640 380
141 iso_pu_bacteria 2791355267 2793364559 380
142 iso_pu_bacteria 2802429633 2806047670 380
143 iso_pu_bacteria 2802429634 2806055089 380
144 iso_pu_bacteria 2802429635 2806062009 380
145 iso_pu_bacteria 2802429636 2806067265 380
146 iso_pu_bacteria 2802429637 2806076586 380
147 iso_pu_bacteria 2818991448 2819607748 380
148 iso_pu_bacteria 2818991453 2819641785 380
149 iso_pu_bacteria 2838042994 2838044553 380
150 iso_pu_bacteria 2838680041 2838680467 380
151 iso_pu_bacteria 2838686498 2838691710 380
152 iso_pu_bacteria 2838694306 2838695500 380
153 iso_pu_bacteria 2838707686 2838708877 380
154 iso_pu_bacteria 2838729681 2838733806 380
155 iso_pu_bacteria 2838742623 2838747130 380
156 iso_pu_bacteria 2841851746 2841856271 380
157 iso_pu_bacteria 2841864319 2841866928 380
158 iso_pu_bacteria 2842077413 2842079888 380
159 iso_pu_bacteria 2842110456 2842112078 380
160 iso_pu_bacteria 2842118031 2842120506 380
161 iso_pu_bacteria 2842156927 2842162059 380
162 iso_pu_bacteria 2842163707 2842169560 380
163 iso_pu_bacteria 2842180545 2842185901 380
164 iso_pu_bacteria 2842217011 2842218922 380
165 iso_pu_bacteria 2842229732 2842235429 380
166 iso_pu_bacteria 2842237096 2842238288 380
167 iso_pu_bacteria 2842243621 2842248116 380
168 iso_pu_bacteria 2842257432 2842262290 380
169 iso_pu_bacteria 2842271015 2842276683 380
170 iso_pu_bacteria 2842291075 2842293549 380
171 iso_pu_bacteria 2842298080 2842301482 380
172 iso_pu_bacteria 2842304105 2842306626 380
173 iso_pu_bacteria 2842341865 2842343191 380
174 iso_pu_bacteria 2842357229 2842360581 380
175 iso_pu_bacteria 2842363717 2842367084 380
176 iso_pu_bacteria 2842370503 2842370930 380
177 iso_pu_bacteria 2842377471 2842379946 380
178 iso_pu_bacteria 2842384541 2842387017 380
179 iso_pu_bacteria 2842395702 2842399131 380
180 iso_pu_bacteria 2842509118 2842512567 380
181 iso_pu_bacteria 2844454524 2844456119 380
182 iso_pu_bacteria 2852387548 2852393358 380
183 iso_pu_bacteria 2857472729 2857472749 380
184 iso_pu_bacteria 2857516855 2857521776 380
185 iso_pu_bacteria 2933570622 2933573695 380
186 iso_pu_bacteria 2933586486 2933587406 380
187 iso_pu_bacteria 2935894831 2935896024 380
188 iso_pu_bacteria 2935901341 2935907297 380
189 iso_pu_bacteria 2936367885 2936369056 380
190 iso_pu_bacteria 2936375103 2936377592 380
191 iso_pu_bacteria 2936381700 2936383624 380
192 iso_pu_bacteria 3005416602 3005422160 380
193 iso_pu_bacteria 639633055 639646525 380
194 iso_pu_bacteria 8005275841 8005278720 380
195 iso_pu_bacteria 8005307578 8005309327 380
196 iso_pu_bacteria 8005314921 8005321440 380
197 iso_pu_bacteria 8005376324 8005377560 380
198 iso_pu_bacteria 8005460587 8005460884 380
199 iso_pu_bacteria 8005484373 8005489810 380
200 iso_pu_bacteria 8005556819 8005560489 380
201 iso_pu_bacteria 8005563573 8005564052 380
202 iso_pu_bacteria 8005570704 8005576793 380
203 iso_pu_bacteria 8005645114 8005650683 380
204 iso_pu_bacteria 8005682033 8005683580 380
205 iso_pu_bacteria 8005695170 8005699371 380
206 iso_pu_bacteria 8018163183 8018168889 380
207 iso_pu_bacteria 8018176218 8018178918 380
208 iso_pu_bacteria 8023680758 8023684370 380
209 iso_pu_bacteria 8024479707 8024480157 380
210 iso_pu_bacteria 8046767195 8046773650 380
211 iso_pu_bacteria 8056375014 8056375516 380
212 iso_pu_bacteria 8057575449 8057579385 380
213 iso_pu_bacteria 8057874678 8057875908 380
214 iso_pu_bacteria 2925326138 2925326432 381
215 3300005436 Ga0070713_100008687 Ga0070713_1000086872 382
216 3300006051 Ga0075364_10032222 Ga0075364_100322223 383
217 3300048919 Ga0496116_0066268 Ga0496116_0066268_743_1897 383
218 3300048920 Ga0496117_0010475 Ga0496117_0010475_6940_8094 383
219 3300048921 Ga0496118_0024407 Ga0496118_0024407_2857_4011 383
220 3300048923 Ga0496120_0023899 Ga0496120_0023899_280_1434 383
221 3300048924 Ga0496121_0000005 Ga0496121_0000005_901941_903095 383
222 3300048926 Ga0496123_0051925 Ga0496123_0051925_143_1297 383
223 3300048927 Ga0496124_0025945 Ga0496124_0025945_4088_5242 383
224 3300048928 Ga0496125_0000159 Ga0496125_0000159_26038_27192 383
225 3300048929 Ga0496126_0049755 Ga0496126_0049755_257_1411 383
226 3300050491 nmdc:mga00v17_3733_c1 nmdc:mga00v17_3733_c1_5557_6711 383
227 3300002773 JGI25152J39213_1012449 JGI25152J39213_10124492 384
228 3300003187 JGI25151J46595_10000711 JGI25151J46595_1000071115 384
229 3300003215 JGI25153J46596_10004152 JGI25153J46596_100041526 384
230 3300003320 rootH2_10060592 rootH2_100605929 384
231 3300003322 rootL2_10020350 rootL2_100203507 384
232 3300003323 rootH1_10076033 rootH1_100760334 384
233 3300003354 JGI25160J50197_1000625 JGI25160J50197_100062510 384
234 3300003771 Ga0055526_1011350 Ga0055526_10113502 384
235 3300004625 Ga0055543_1000602 Ga0055543_100060216 384
236 3300005578 Ga0068854_100073199 Ga0068854_1000731993 384
237 3300006038 Ga0075365_10022104 Ga0075365_100221044 384
238 3300006042 Ga0075368_10032709 Ga0075368_100327092 384
239 3300006177 Ga0075362_10092093 Ga0075362_100920932 384
240 3300006353 Ga0075370_10030557 Ga0075370_100305573 384
241 3300009093 Ga0105240_10000097 Ga0105240_10000097154 384
242 3300009545 Ga0105237_10009920 Ga0105237_1000992011 384
243 3300009765 Ga0123341_1000030 Ga0123341_100003015 384
244 3300009766 Ga0123342_1008451 Ga0123342_10084518 384
245 3300010375 Ga0105239_10000667 Ga0105239_1000066728 384
246 3300013104 Ga0157370_10006291 Ga0157370_1000629114 384
247 3300013297 Ga0157378_10218003 Ga0157378_102180032 384
248 3300015262 Ga0182007_10019819 Ga0182007_100198192 384
249 3300015265 Ga0182005_1002511 Ga0182005_10025113 384
250 3300025228 Ga0209672_108181 Ga0209672_1081812 384
251 3300025230 Ga0209563_105493 Ga0209563_1054933 384
252 3300025245 Ga0207425_1002922 Ga0207425_10029226 384
253 3300025253 Ga0209677_101053 Ga0209677_10105311 384
254 3300025258 Ga0209129_1000544 Ga0209129_100054413 384
255 3300025261 Ga0209233_1000218 Ga0209233_100021827 384
256 3300025294 Ga0209025_1000574 Ga0209025_100057450 384
257 3300025297 Ga0209758_1001183 Ga0209758_100118316 384
258 3300025297 Ga0209758_1018154 Ga0209758_10181543 384
259 3300025298 Ga0209050_1014744 Ga0209050_10147443 384
260 3300025299 Ga0209256_1002434 Ga0209256_100243413 384
261 3300025302 Ga0207426_1000931 Ga0207426_100093116 384
262 3300025303 Ga0209051_1000733 Ga0209051_100073332 384
263 3300025304 Ga0209257_1019137 Ga0209257_10191373 384
264 3300025913 Ga0207695_10000187 Ga0207695_10000187158 384
265 3300025914 Ga0207671_10030783 Ga0207671_100307833 384
266 3300027312 Ga0209371_1002338 Ga0209371_10023382 384
267 3300030500 Ga0268256_1002076 Ga0268256_10020762 384
268 3300041441 Ga0451787_409637 Ga0451787_409637_176_1330 384
269 3300041491 Ga0451833_1484565 Ga0451833_1484565_171_1325 384
270 3300041496 Ga0451839_0437753 Ga0451839_0437753_1723_2877 384
271 3300041501 Ga0451845_0200587 Ga0451845_0200587_396_1550 384
272 3300041507 Ga0451851_0802466 Ga0451851_0802466_400_1554 384
273 3300041511 Ga0451855_0100982 Ga0451855_0100982_61_1215 384
274 3300045976 Ga0466967_0335584 Ga0466967_0335584_70_1236 384
275 3300048920 Ga0496117_0004996 Ga0496117_0004996_2017_3177 384
276 3300048921 Ga0496118_0075894 Ga0496118_0075894_837_1997 384
277 3300048922 Ga0496119_0067859 Ga0496119_0067859_105_1265 384
278 3300048923 Ga0496120_0008400 Ga0496120_0008400_4929_6089 384
279 3300048924 Ga0496121_0000084 Ga0496121_0000084_99682_100842 384
280 3300048925 Ga0496122_0039774 Ga0496122_0039774_1320_2480 384
281 3300049573 Ga0501037_0003445 Ga0501037_0003445_8790_9956 384
282 3300049581 Ga0501047_0014107 Ga0501047_0014107_3190_4356 384
283 3300049823 Ga0501044_0001184 Ga0501044_0001184_15180_16346 384
284 3300061719 Ga0466962_0070384 Ga0466962_0070384_440_1597 384

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

139

277

0.89

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

2

127

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yaq-assembly1.cif.gz_D crystal structure of scyllo-inositol dehydrogenase with l-glucose dehydrogenase activity complexed with scyllo-inosose 0.9042 5 376
6a3i-assembly1.cif.gz_B levoglucosan dehydrogenase, complex with nadh and levoglucosan 0.8995 3 377
6a3g-assembly1.cif.gz_B levoglucosan dehydrogenase, complex with nadh 0.8977 3 378
6a3j-assembly1.cif.gz_D levoglucosan dehydrogenase, complex with nadh and l-sorbose 0.8975 3 378
5yaq-assembly1.cif.gz_D crystal structure of scyllo-inositol dehydrogenase with l-glucose dehydrogenase activity complexed with scyllo-inosose 0.8971 5 376
ID Description Score Start End Superfamily
af_P42599_1_134_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9174 5 143 3.40.50.720
3q2kH01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9142 3 134 3.40.50.720
af_F1R9L8_3_129_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9097 4 131 3.40.50.720
af_Q2G1E5_4_119_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9034 5 128 3.40.50.720
4hktB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8981 5 129 3.40.50.720
ID Description Score Start End GO Terms
AF-X0V9H1-F1-model_v4 Gfo/Idh/MocA-like oxidoreductase N-terminal domain-containing protein 0.9802 3 98 GO:0000166
AF-A0A1F5UTR3-F1-model_v4 Oxidoreductase 0.9781 3 378 GO:0000166
GO:0016491
AF-A0A496R973-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.978 1 376 GO:0000166
GO:0016491
AF-A0A3A6JXG2-F1-model_v4 deleted 0.9744 3 378
AF-A0A1F5UTR3-F1-model_v4 Oxidoreductase 0.973 3 378 GO:0000166
GO:0016491

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pLDDT pTM Quality
94.57 0.92 High
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Predicted Structure (AlphaFold2)

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