F386715

General Info

Members Datasets Scaffolds Average Seq Length
285 141 570 412

Family's Representative Sequence

Representative Sequence 3300006237|Ga0097621_100034985|Ga0097621_1000349853
Length 446
Sequence MKSRRTSLRPPRISAEAAGSNGAMTLALYQGLTRVLSPAAPALLRRRVSRGKEDAARLGERRGEASRPRPHGRLIWIHGASVGESLAALPLVSALLQQTGRHVLVTTGTVTSAQLMEERLPPGALHQYVPLDSRDYVRRFLEHWRPDLALFVESELWPNLILQTQTQGIPMGLINARLSERSFRAWRYAPALARRILSAFDIALAQDADIAERLIGLGASSVRIAGSLKADAPPLPVDEAAVASFRAAAGARAIFLAASTHPGEDESVMEVASGFRQQRPDALTVIVPRHPQRGAEIEALAKALGLRSVRRSSGALPSSDTEIYIADTLGELGLFYRAAPFAFLGGSLVEHGGQNPLEPARLGTAVVTGPHIHNFEAIYSVLLKAQGEGLIHSPAELAQTVAKLSLNPDLASELGVRAREAATGLSGALSATIAAAEALLASHART

Samples

Sample ID Description Type Environment
1 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
87 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
88 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
89 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
94 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
105 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
106 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
107 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
122 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
132 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
135 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
136 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
137 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
138 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
139 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
140 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.56
Nodule 0
Rhizoplane 0
Rhizosphere 93.68
Stem 0
Stem Tuber 0
Unclassified 2.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0097621_100034985 3300006237 Bacteria 4011
2 JGI25165J46597_1000036 3300003214 Bacteria 286380
3 JGI25153J46596_10001205 3300003215 Bacteria 15650
4 rootH2_10030762 3300003320 Bacteria 11165
5 rootH2_10066324 3300003320 Bacteria 5758
6 Ga0070658_10002265 3300005327 Bacteria 16160
7 Ga0070658_10018778 3300005327 Bacteria 5538
8 Ga0070658_10054703 3300005327 Bacteria 3240
9 Ga0070676_10034134 3300005328 Bacteria 2921
10 Ga0070683_100081088 3300005329 Bacteria 3038
11 Ga0070670_100252917 3300005331 Bacteria 1535
12 Ga0070666_10130744 3300005335 Unclassified 1744
13 Ga0070680_100017106 3300005336 Bacteria 5711
14 Ga0070680_100213984 3300005336 Bacteria 1626
15 Ga0070660_100012006 3300005339 Bacteria 6180
16 Ga0070689_100046195 3300005340 Bacteria 3355
17 Ga0070661_100000167 3300005344 Bacteria 53951
18 Ga0070675_100044935 3300005354 Bacteria 3613
19 Ga0070673_100106601 3300005364 Bacteria 2317
20 Ga0070673_100113424 3300005364 Bacteria 2251
21 Ga0070673_100137334 3300005364 Bacteria 2059
22 Ga0070659_100004063 3300005366 Bacteria 10436
23 Ga0070667_100045496 3300005367 Bacteria 3690
24 Ga0070714_100001011 3300005435 Bacteria 20078
25 Ga0070678_100102877 3300005456 Bacteria 2218
26 Ga0070681_10000001 3300005458 Bacteria 946857
27 Ga0070681_10027874 3300005458 Bacteria 5679
28 Ga0068867_100010890 3300005459 Bacteria 6414
29 Ga0068867_100073498 3300005459 Bacteria 2560
30 Ga0070679_100000032 3300005530 Bacteria 105384
31 Ga0070679_100067696 3300005530 Bacteria 3561
32 Ga0070679_100087293 3300005530 Bacteria 3106
33 Ga0070679_100307791 3300005530 Bacteria 1535
34 Ga0070684_100114330 3300005535 Bacteria 2423
35 Ga0070665_100000381 3300005548 Bacteria 65638
36 Ga0070665_100014878 3300005548 Bacteria 7810
37 Ga0070665_100034869 3300005548 Bacteria 5062
38 Ga0070665_100052752 3300005548 Bacteria 4078
39 Ga0070665_100095723 3300005548 Bacteria 2974
40 Ga0070665_100132971 3300005548 Bacteria 2489
41 Ga0068855_100017791 3300005563 Bacteria 8544
42 Ga0068855_100040532 3300005563 Bacteria 5527
43 Ga0068855_100089851 3300005563 Bacteria 3545
44 Ga0068855_100207154 3300005563 Bacteria 2206
45 Ga0068857_100293269 3300005577 Bacteria 1498
46 Ga0068854_100109369 3300005578 Bacteria 2083
47 Ga0068856_100094167 3300005614 Bacteria 2982
48 Ga0068858_100088908 3300005842 Bacteria 2874
49 Ga0068862_100112709 3300005844 Bacteria 2389
50 Ga0097621_100000209 3300006237 Bacteria 38414
51 Ga0097621_100094217 3300006237 Bacteria 2510
52 Ga0068871_100000755 3300006358 Bacteria 21836
53 Ga0068871_100021954 3300006358 Bacteria 4916
54 Ga0068871_100045882 3300006358 Bacteria 3519
55 Ga0068871_100197102 3300006358 Bacteria 1737
56 Ga0075428_100075977 3300006844 Bacteria 3667
57 Ga0075431_100107064 3300006847 Bacteria 2884
58 Ga0068865_100002231 3300006881 Bacteria 11409
59 Ga0068865_100170199 3300006881 Bacteria 1669
60 Ga0105240_10025626 3300009093 Bacteria 7745
61 Ga0105240_10028810 3300009093 Bacteria 7244
62 Ga0105240_10043062 3300009093 Bacteria 5748
63 Ga0105240_10044403 3300009093 Bacteria 5647
64 Ga0105240_10060297 3300009093 Bacteria 4730
65 Ga0105240_10146763 3300009093 Bacteria 2814
66 Ga0111539_10052189 3300009094 Bacteria 4867
67 Ga0105245_10017456 3300009098 Bacteria 6260
68 Ga0105243_10005721 3300009148 Bacteria 9657
69 Ga0105241_10010798 3300009174 Bacteria 6699
70 Ga0105241_10050014 3300009174 Bacteria 3185
71 Ga0105241_10204184 3300009174 Bacteria 1652
72 Ga0105241_10220900 3300009174 Bacteria 1592
73 Ga0105242_10015932 3300009176 Bacteria 5841
74 Ga0105242_10098417 3300009176 Bacteria 2474
75 Ga0105248_10069782 3300009177 Bacteria 3946
76 Ga0105237_10053956 3300009545 Bacteria 4029
77 Ga0105237_10054187 3300009545 Bacteria 4019
78 Ga0105237_10078838 3300009545 Bacteria 3283
79 Ga0105237_10094820 3300009545 Bacteria 2973
80 Ga0105237_10160685 3300009545 Bacteria 2245
81 Ga0105237_10212221 3300009545 Bacteria 1936
82 Ga0105238_10042101 3300009551 Bacteria 4625
83 Ga0105238_10073507 3300009551 Bacteria 3413
84 Ga0105238_10095578 3300009551 Bacteria 2958
85 Ga0105238_10157862 3300009551 Bacteria 2243
86 Ga0105238_10250356 3300009551 Bacteria 1750
87 Ga0105239_10008191 3300010375 Bacteria 11924
88 Ga0105239_10017402 3300010375 Bacteria 7949
89 Ga0105246_10008773 3300011119 Bacteria 6219
90 Ga0105246_10022730 3300011119 Bacteria 4050
91 Ga0105246_10217058 3300011119 Bacteria 1497
92 Ga0157369_10100890 3300013105 Bacteria 3077
93 Ga0157369_10206492 3300013105 Unclassified 2060
94 Ga0157369_10257596 3300013105 Bacteria 1820
95 Ga0157374_10379722 3300013296 Bacteria 1407
96 Ga0157378_10023757 3300013297 Bacteria 5393
97 Ga0157375_10044238 3300013308 Bacteria 4324
98 Ga0163163_10000015 3300014325 Bacteria 214881
99 Ga0157379_10000349 3300014968 Bacteria 37189
100 Ga0157379_10021825 3300014968 Bacteria 5673
101 Ga0213872_10000539 3300021361 Bacteria 29475
102 Ga0213872_10000911 3300021361 Bacteria 21163
103 Ga0213872_10001217 3300021361 Bacteria 17405
104 Ga0213872_10003806 3300021361 Bacteria 8218
105 Ga0213872_10005409 3300021361 Bacteria 6577
106 Ga0213872_10011781 3300021361 Bacteria 4133
107 Ga0213872_10014208 3300021361 Bacteria 3719
108 Ga0213872_10016280 3300021361 Bacteria 3452
109 Ga0209233_1000015 3300025261 Bacteria 980563
110 Ga0209758_1000013 3300025297 Bacteria 873003
111 Ga0207692_10098579 3300025898 Bacteria 1600
112 Ga0207680_10109462 3300025903 Bacteria 1789
113 Ga0207645_10028684 3300025907 Bacteria 3592
114 Ga0207705_10006889 3300025909 Bacteria 8397
115 Ga0207705_10161248 3300025909 Bacteria 1685
116 Ga0207654_10109852 3300025911 Bacteria 1714
117 Ga0207707_10000001 3300025912 Bacteria 1212482
118 Ga0207695_10015029 3300025913 Bacteria 9135
119 Ga0207695_10113154 3300025913 Bacteria 2691
120 Ga0207695_10187031 3300025913 Bacteria 1989
121 Ga0207671_10029486 3300025914 Bacteria 4097
122 Ga0207671_10031450 3300025914 Bacteria 3955
123 Ga0207671_10244976 3300025914 Unclassified 1408
124 Ga0207657_10009964 3300025919 Bacteria 9512
125 Ga0207652_10000571 3300025921 Bacteria 37063
126 Ga0207652_10048107 3300025921 Bacteria 3645
127 Ga0207652_10226498 3300025921 Bacteria 1685
128 Ga0207694_10042371 3300025924 Bacteria 3511
129 Ga0207694_10283370 3300025924 Bacteria 1362
130 Ga0207650_10209015 3300025925 Bacteria 1567
131 Ga0207659_10029720 3300025926 Bacteria 3727
132 Ga0207687_10060307 3300025927 Bacteria 2675
133 Ga0207664_10002472 3300025929 Bacteria 12235
134 Ga0207690_10021630 3300025932 Bacteria 3991
135 Ga0207686_10079044 3300025934 Bacteria 2140
136 Ga0207670_10032941 3300025936 Bacteria 3336
137 Ga0207704_10012257 3300025938 Bacteria 4251
138 Ga0207704_10018343 3300025938 Bacteria 3650
139 Ga0207704_10254254 3300025938 Bacteria 1321
140 Ga0207711_10028826 3300025941 Bacteria 4676
141 Ga0207689_10077772 3300025942 Bacteria 2727
142 Ga0207661_10149619 3300025944 Bacteria 2017
143 Ga0207667_10020710 3300025949 Bacteria 7308
144 Ga0207651_10011755 3300025960 Bacteria 4914
145 Ga0207651_10086309 3300025960 Bacteria 2280
146 Ga0207641_10140913 3300026088 Bacteria 2175
147 Ga0207648_10033844 3300026089 Bacteria 4506
148 Ga0207648_10060573 3300026089 Bacteria 3301
149 Ga0207674_10154204 3300026116 Bacteria 2252
150 Ga0207674_10306047 3300026116 Bacteria 1538
151 Ga0207683_10009686 3300026121 Bacteria 8214
152 Ga0207683_10054142 3300026121 Bacteria 3518
153 Ga0207683_10085643 3300026121 Bacteria 2801
154 Ga0268266_10002150 3300028379 Bacteria 21661
155 Ga0265337_1001921 3300028556 Bacteria 9879
156 Ga0265338_10011385 3300028800 Bacteria 10285
157 Ga0265338_10015754 3300028800 Bacteria 8280
158 Ga0265330_10068851 3300031235 Bacteria 1532
159 Ga0265332_10005132 3300031238 Bacteria 6070
160 Ga0265340_10004023 3300031247 Bacteria 8260
161 Ga0265331_10000003 3300031250 Bacteria 499358
162 Ga0265316_10018418 3300031344 Bacteria 6002
163 Ga0265316_10104980 3300031344 Bacteria 2144
164 Ga0265313_10002941 3300031595 Bacteria 14226
165 Ga0265313_10008217 3300031595 Bacteria 6971
166 Ga0265313_10039194 3300031595 Bacteria 2352
167 Ga0265314_10032401 3300031711 Bacteria 3844
168 Ga0265314_10046377 3300031711 Bacteria 3066
169 Ga0265314_10071763 3300031711 Bacteria 2315
170 Ga0307516_10021298 3300031730 Bacteria 6676
171 Ga0307516_10050839 3300031730 Bacteria 4064
172 Ga0373941_0017199 3300035115 Bacteria 1977
173 Ga0395899_0021117 3300037312 Bacteria 4937
174 Ga0395900_0047618 3300037418 Bacteria 4414
175 Ga0395898_0023278 3300037466 Bacteria 6260
176 Ga0395898_0031885 3300037466 Bacteria 5262
177 Ga0395898_0367545 3300037466 Unclassified 1372
178 Ga0395901_0070258 3300038443 Bacteria 3648
179 Ga0395901_0105708 3300038443 Bacteria 2954
180 Ga0436365_1698380 3300039437 Bacteria 14447
181 Ga0436361_0218334 3300039447 Bacteria 11172
182 Ga0436361_0244686 3300039447 Bacteria 8767
183 Ga0436361_0328451 3300039447 Bacteria 4124
184 Ga0436361_0529612 3300039447 Bacteria 30832
185 Ga0436361_0577331 3300039447 Bacteria 5831
186 Ga0436361_0761484 3300039447 Bacteria 10585
187 Ga0436361_0804729 3300039447 Bacteria 3670
188 Ga0436361_0813479 3300039447 Bacteria 9636
189 Ga0453684_0000006 3300044712 Bacteria 1364191
190 Ga0453684_0000048 3300044712 Bacteria 559743
191 Ga0453684_0016114 3300044712 Bacteria 11726
192 Ga0466958_0000202 3300045836 Bacteria 22041
193 Ga0495651_0118824 3300046462 Bacteria 1945
194 Ga0495582_0109478 3300046473 Bacteria 1551
195 Ga0495648_0077145 3300046524 Bacteria 1911
196 Ga0495654_0053674 3300046530 Bacteria 1958
197 Ga0495665_0004955 3300046531 Bacteria 7177
198 Ga0495658_0028567 3300046683 Bacteria 3012
199 Ga0495589_0054872 3300046794 Bacteria 1964
200 Ga0501031_0004390 3300049568 Bacteria 9141
201 Ga0501033_0015052 3300049570 Bacteria 5869
202 Ga0501033_0019937 3300049570 Bacteria 5068
203 Ga0501033_0053664 3300049570 Bacteria 2985
204 Ga0501033_0081621 3300049570 Bacteria 2371
205 Ga0501033_0085358 3300049570 Bacteria 2312
206 Ga0501034_0028181 3300049571 Bacteria 5714
207 Ga0501034_0061648 3300049571 Bacteria 3766
208 Ga0501034_0069141 3300049571 Bacteria 3542
209 Ga0501034_0081893 3300049571 Bacteria 3230
210 Ga0501034_0110859 3300049571 Bacteria 2735
211 Ga0501034_0179908 3300049571 Bacteria 2080
212 Ga0501036_0004514 3300049572 Bacteria 11237
213 Ga0501036_0047092 3300049572 Bacteria 3652
214 Ga0501036_0059470 3300049572 Bacteria 3238
215 Ga0501036_0213820 3300049572 Unclassified 1620
216 Ga0501037_0005955 3300049573 Bacteria 8907
217 Ga0501037_0015642 3300049573 Bacteria 5585
218 Ga0501037_0021133 3300049573 Bacteria 4809
219 Ga0501037_0035288 3300049573 Bacteria 3689
220 Ga0501038_0071605 3300049574 Bacteria 2940
221 Ga0501038_0078250 3300049574 Bacteria 2791
222 Ga0501038_0101510 3300049574 Bacteria 2395
223 Ga0501038_0119358 3300049574 Bacteria 2177
224 Ga0501039_0077844 3300049575 Bacteria 2579
225 Ga0501043_0056476 3300049579 Bacteria 3084
226 Ga0501043_0141409 3300049579 Bacteria 1884
227 Ga0501043_0196196 3300049579 Bacteria 1568
228 Ga0501046_0003949 3300049580 Bacteria 13545
229 Ga0501046_0005260 3300049580 Bacteria 11574
230 Ga0501047_0014609 3300049581 Bacteria 7471
231 Ga0501047_0020524 3300049581 Bacteria 6343
232 Ga0501047_0038998 3300049581 Bacteria 4595
233 Ga0501047_0102569 3300049581 Bacteria 2740
234 Ga0501047_0117079 3300049581 Bacteria 2546
235 Ga0501047_0186626 3300049581 Bacteria 1939
236 Ga0501047_0187754 3300049581 Bacteria 1931
237 Ga0501047_0201647 3300049581 Bacteria 1850
238 Ga0501048_0016323 3300049582 Bacteria 5472
239 Ga0501048_0061040 3300049582 Bacteria 2671
240 Ga0501068_0048411 3300049584 Bacteria 2566
241 Ga0501069_0054432 3300049585 Bacteria 2228
242 Ga0501070_0001483 3300049586 Bacteria 20998
243 Ga0501070_0011058 3300049586 Bacteria 7620
244 Ga0501070_0065366 3300049586 Bacteria 3011
245 Ga0501070_0099526 3300049586 Bacteria 2405
246 Ga0501073_0064210 3300049589 Bacteria 2560
247 Ga0501074_0002268 3300049590 Bacteria 13376
248 Ga0501075_0059833 3300049591 Bacteria 2870
249 Ga0501079_0011714 3300049741 Bacteria 6697
250 Ga0501080_0005544 3300049742 Bacteria 11270
251 Ga0501080_0030130 3300049742 Bacteria 5055
252 Ga0501080_0033994 3300049742 Bacteria 4760
253 Ga0501080_0041388 3300049742 Bacteria 4294
254 Ga0501080_0051093 3300049742 Bacteria 3846
255 Ga0501080_0057031 3300049742 Bacteria 3637
256 Ga0501083_0037949 3300049744 Bacteria 3277
257 Ga0501035_0002425 3300049822 Bacteria 18219
258 Ga0501035_0003567 3300049822 Bacteria 14870
259 Ga0501035_0004712 3300049822 Bacteria 12950
260 Ga0501035_0010177 3300049822 Bacteria 8729
261 Ga0501035_0047615 3300049822 Bacteria 3848
262 Ga0501035_0057859 3300049822 Bacteria 3455
263 Ga0501035_0068440 3300049822 Bacteria 3148
264 Ga0501044_0001264 3300049823 Bacteria 29871
265 Ga0501044_0001279 3300049823 Bacteria 29728
266 Ga0501044_0006189 3300049823 Bacteria 13226
267 Ga0501044_0010691 3300049823 Bacteria 9958
268 Ga0501044_0086721 3300049823 Bacteria 3162
269 Ga0501044_0102472 3300049823 Bacteria 2878
270 Ga0501044_0130495 3300049823 Bacteria 2507
271 Ga0501044_0130961 3300049823 Bacteria 2502
272 Ga0501044_0181611 3300049823 Bacteria 2070
273 Ga0501044_0197318 3300049823 Bacteria 1972
274 nmdc:mga06r32_182824_c1 3300050510 Bacteria 2082
275 nmdc:mga08y16_20100_c1 3300050511 Bacteria 7046
276 Ga0500635_0013404 3300053080 Bacteria 2381
277 Ga0500643_000003 3300053087 Bacteria 876659
278 Ga0500646_0012276 3300053090 Bacteria 2210
279 Ga0500595_000431 3300053119 Bacteria 26251
280 Ga0500595_035927 3300053119 Unclassified 1628
281 Ga0500559_0013032 3300053136 Bacteria 3526
282 Ga0500559_0059566 3300053136 Bacteria 1700
283 Ga0500573_0000037 3300053140 Bacteria 107603
284 Ga0500637_0001611 3300053178 Bacteria 9688
285 Ga0501082_0008955 3300060353 Bacteria 8638
286 Ga0097621_100034985
287 JGI25165J46597_1000036
288 JGI25153J46596_10001205
289 rootH2_10030762
290 rootH2_10066324
291 Ga0070658_10002265
292 Ga0070658_10018778
293 Ga0070658_10054703
294 Ga0070676_10034134
295 Ga0070683_100081088
296 Ga0070670_100252917
297 Ga0070666_10130744
298 Ga0070680_100017106
299 Ga0070680_100213984
300 Ga0070660_100012006
301 Ga0070689_100046195
302 Ga0070661_100000167
303 Ga0070675_100044935
304 Ga0070673_100106601
305 Ga0070673_100113424
306 Ga0070673_100137334
307 Ga0070659_100004063
308 Ga0070667_100045496
309 Ga0070714_100001011
310 Ga0070678_100102877
311 Ga0070681_10000001
312 Ga0070681_10027874
313 Ga0068867_100010890
314 Ga0068867_100073498
315 Ga0070679_100000032
316 Ga0070679_100067696
317 Ga0070679_100087293
318 Ga0070679_100307791
319 Ga0070684_100114330
320 Ga0070665_100000381
321 Ga0070665_100014878
322 Ga0070665_100034869
323 Ga0070665_100052752
324 Ga0070665_100095723
325 Ga0070665_100132971
326 Ga0068855_100017791
327 Ga0068855_100040532
328 Ga0068855_100089851
329 Ga0068855_100207154
330 Ga0068857_100293269
331 Ga0068854_100109369
332 Ga0068856_100094167
333 Ga0068858_100088908
334 Ga0068862_100112709
335 Ga0097621_100000209
336 Ga0097621_100094217
337 Ga0068871_100000755
338 Ga0068871_100021954
339 Ga0068871_100045882
340 Ga0068871_100197102
341 Ga0075428_100075977
342 Ga0075431_100107064
343 Ga0068865_100002231
344 Ga0068865_100170199
345 Ga0105240_10025626
346 Ga0105240_10028810
347 Ga0105240_10043062
348 Ga0105240_10044403
349 Ga0105240_10060297
350 Ga0105240_10146763
351 Ga0111539_10052189
352 Ga0105245_10017456
353 Ga0105243_10005721
354 Ga0105241_10010798
355 Ga0105241_10050014
356 Ga0105241_10204184
357 Ga0105241_10220900
358 Ga0105242_10015932
359 Ga0105242_10098417
360 Ga0105248_10069782
361 Ga0105237_10053956
362 Ga0105237_10054187
363 Ga0105237_10078838
364 Ga0105237_10094820
365 Ga0105237_10160685
366 Ga0105237_10212221
367 Ga0105238_10042101
368 Ga0105238_10073507
369 Ga0105238_10095578
370 Ga0105238_10157862
371 Ga0105238_10250356
372 Ga0105239_10008191
373 Ga0105239_10017402
374 Ga0105246_10008773
375 Ga0105246_10022730
376 Ga0105246_10217058
377 Ga0157369_10100890
378 Ga0157369_10206492
379 Ga0157369_10257596
380 Ga0157374_10379722
381 Ga0157378_10023757
382 Ga0157375_10044238
383 Ga0163163_10000015
384 Ga0157379_10000349
385 Ga0157379_10021825
386 Ga0213872_10000539
387 Ga0213872_10000911
388 Ga0213872_10001217
389 Ga0213872_10003806
390 Ga0213872_10005409
391 Ga0213872_10011781
392 Ga0213872_10014208
393 Ga0213872_10016280
394 Ga0209233_1000015
395 Ga0209758_1000013
396 Ga0207692_10098579
397 Ga0207680_10109462
398 Ga0207645_10028684
399 Ga0207705_10006889
400 Ga0207705_10161248
401 Ga0207654_10109852
402 Ga0207707_10000001
403 Ga0207695_10015029
404 Ga0207695_10113154
405 Ga0207695_10187031
406 Ga0207671_10029486
407 Ga0207671_10031450
408 Ga0207671_10244976
409 Ga0207657_10009964
410 Ga0207652_10000571
411 Ga0207652_10048107
412 Ga0207652_10226498
413 Ga0207694_10042371
414 Ga0207694_10283370
415 Ga0207650_10209015
416 Ga0207659_10029720
417 Ga0207687_10060307
418 Ga0207664_10002472
419 Ga0207690_10021630
420 Ga0207686_10079044
421 Ga0207670_10032941
422 Ga0207704_10012257
423 Ga0207704_10018343
424 Ga0207704_10254254
425 Ga0207711_10028826
426 Ga0207689_10077772
427 Ga0207661_10149619
428 Ga0207667_10020710
429 Ga0207651_10011755
430 Ga0207651_10086309
431 Ga0207641_10140913
432 Ga0207648_10033844
433 Ga0207648_10060573
434 Ga0207674_10154204
435 Ga0207674_10306047
436 Ga0207683_10009686
437 Ga0207683_10054142
438 Ga0207683_10085643
439 Ga0268266_10002150
440 Ga0265337_1001921
441 Ga0265338_10011385
442 Ga0265338_10015754
443 Ga0265330_10068851
444 Ga0265332_10005132
445 Ga0265340_10004023
446 Ga0265331_10000003
447 Ga0265316_10018418
448 Ga0265316_10104980
449 Ga0265313_10002941
450 Ga0265313_10008217
451 Ga0265313_10039194
452 Ga0265314_10032401
453 Ga0265314_10046377
454 Ga0265314_10071763
455 Ga0307516_10021298
456 Ga0307516_10050839
457 Ga0373941_0017199
458 Ga0395899_0021117
459 Ga0395900_0047618
460 Ga0395898_0023278
461 Ga0395898_0031885
462 Ga0395898_0367545
463 Ga0395901_0070258
464 Ga0395901_0105708
465 Ga0436365_1698380
466 Ga0436361_0218334
467 Ga0436361_0244686
468 Ga0436361_0328451
469 Ga0436361_0529612
470 Ga0436361_0577331
471 Ga0436361_0761484
472 Ga0436361_0804729
473 Ga0436361_0813479
474 Ga0453684_0000006
475 Ga0453684_0000048
476 Ga0453684_0016114
477 Ga0466958_0000202
478 Ga0495651_0118824
479 Ga0495582_0109478
480 Ga0495648_0077145
481 Ga0495654_0053674
482 Ga0495665_0004955
483 Ga0495658_0028567
484 Ga0495589_0054872
485 Ga0501031_0004390
486 Ga0501033_0015052
487 Ga0501033_0019937
488 Ga0501033_0053664
489 Ga0501033_0081621
490 Ga0501033_0085358
491 Ga0501034_0028181
492 Ga0501034_0061648
493 Ga0501034_0069141
494 Ga0501034_0081893
495 Ga0501034_0110859
496 Ga0501034_0179908
497 Ga0501036_0004514
498 Ga0501036_0047092
499 Ga0501036_0059470
500 Ga0501036_0213820
501 Ga0501037_0005955
502 Ga0501037_0015642
503 Ga0501037_0021133
504 Ga0501037_0035288
505 Ga0501038_0071605
506 Ga0501038_0078250
507 Ga0501038_0101510
508 Ga0501038_0119358
509 Ga0501039_0077844
510 Ga0501043_0056476
511 Ga0501043_0141409
512 Ga0501043_0196196
513 Ga0501046_0003949
514 Ga0501046_0005260
515 Ga0501047_0014609
516 Ga0501047_0020524
517 Ga0501047_0038998
518 Ga0501047_0102569
519 Ga0501047_0117079
520 Ga0501047_0186626
521 Ga0501047_0187754
522 Ga0501047_0201647
523 Ga0501048_0016323
524 Ga0501048_0061040
525 Ga0501068_0048411
526 Ga0501069_0054432
527 Ga0501070_0001483
528 Ga0501070_0011058
529 Ga0501070_0065366
530 Ga0501070_0099526
531 Ga0501073_0064210
532 Ga0501074_0002268
533 Ga0501075_0059833
534 Ga0501079_0011714
535 Ga0501080_0005544
536 Ga0501080_0030130
537 Ga0501080_0033994
538 Ga0501080_0041388
539 Ga0501080_0051093
540 Ga0501080_0057031
541 Ga0501083_0037949
542 Ga0501035_0002425
543 Ga0501035_0003567
544 Ga0501035_0004712
545 Ga0501035_0010177
546 Ga0501035_0047615
547 Ga0501035_0057859
548 Ga0501035_0068440
549 Ga0501044_0001264
550 Ga0501044_0001279
551 Ga0501044_0006189
552 Ga0501044_0010691
553 Ga0501044_0086721
554 Ga0501044_0102472
555 Ga0501044_0130495
556 Ga0501044_0130961
557 Ga0501044_0181611
558 Ga0501044_0197318
559 nmdc:mga06r32_182824_c1
560 nmdc:mga08y16_20100_c1
561 Ga0500635_0013404
562 Ga0500643_000003
563 Ga0500646_0012276
564 Ga0500595_000431
565 Ga0500595_035927
566 Ga0500559_0013032
567 Ga0500559_0059566
568 Ga0500573_0000037
569 Ga0500637_0001611
570 Ga0501082_0008955

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04413

Glycos_transf_N

3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)

56

232

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bfc-assembly1.cif.gz_A crystal structure of the c-terminal cmp-kdo binding domain of waaa from acinetobacter baumannii 0.9226 219 397
4bfc-assembly1.cif.gz_A crystal structure of the c-terminal cmp-kdo binding domain of waaa from acinetobacter baumannii 0.8549 219 397
3lrx-assembly1.cif.gz_A crystal structure of the c-terminal domain (residues 78-226) of pf1911 hydrogenase from pyrococcus furiosus, northeast structural genomics consortium target pfr246a 0.6722 46 152
3lrx-assembly4.cif.gz_F crystal structure of the c-terminal domain (residues 78-226) of pf1911 hydrogenase from pyrococcus furiosus, northeast structural genomics consortium target pfr246a 0.6707 46 152
1v4v-assembly1.cif.gz_B crystal structure of udp-n-acetylglucosamine 2-epimerase from thermus thermophilus hb8 0.6637 53 391
ID Description Score Start End Superfamily
af_A0A1D6N6V1_47_223_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.9654 42 207 3.40.50.11720
af_A0A1D6L6D3_126_238_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.9536 55 147 3.40.50.11720
af_A0A0P0VAM2_51_200_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.9516 44 182 3.40.50.11720
af_P0AC75_41_209_3.40.50.11720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;3-Deoxy-D-manno-octulosonic-acid transferase, N-terminal domain 0.9504 45 208 3.40.50.11720
4bfcA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9226 219 397 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A060CN62-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9881 33 185 GO:0005886
GO:0009244
GO:0009245
GO:0043842
AF-A0A352GLD9-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9813 5 206 GO:0005886
GO:0009244
GO:0009245
GO:0043842
AF-A0A3S2FJ02-F1-model_v4 deleted 0.9757 7 202
AF-A0A2P2JTP7-F1-model_v4 Uncharacterized protein MANES_08G018900 0.9722 7 197 GO:0005886
GO:0009245
GO:0043842
AF-A0A436F439-F1-model_v4 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase) 0.9719 7 193 GO:0005886
GO:0009244
GO:0009245
GO:0043842

Map