F386887

General Info

Members Datasets Scaffolds Average Seq Length
285 176 570 332

Family's Representative Sequence

Representative Sequence 3300031665|Ga0316575_10005863|Ga0316575_100058633
Length 375
Sequence MVSPRASASDAVMDAAHVKPPAARRLGTPIEPPGKPATGADGCLLRPLQIGPYRFPNNLVLAPMAGVSDRPFRSLCRRLGAGLAVSEMISSDASLRGTTKSVRRLDFAGEQGPISVQIVGTDPGVMAEAARRHLDLGAKIIDINMGCPAKKVCRVAAGSALLKDEALVGRILSAVVAAVDAPVTLKIRTGWSPETRNAATIARIAEDCGIAALAIHGRTRACGYAVPAEHDTIRTVRRNVRIPLIANGDIDSPERAREVLNSTGADAIMLGRGAQGRPWLFRDIAVYLATGSRPAEPPSDWVRDLLLEHLDLLYGFYGTHTGVRIARKHIAWYSRGLPDATGLRERINRAESPAHQRDLVSGFYNNIKGREDEAA

Samples

Sample ID Description Type Environment
1 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
2 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
78 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
81 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
82 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
83 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
84 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
88 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
91 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
92 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
93 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
94 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
98 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
108 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
109 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
110 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
111 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
112 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
113 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
114 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
115 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
116 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
117 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
118 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
123 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
156 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
157 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
158 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
161 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
163 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
164 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
165 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
166 2547132512 Azospira oryzae 6a3 Isolate Unclassified
167 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
168 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
169 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
170 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
171 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
172 2846033681 Chromobacterium sinusclupearum MWU13-2610 Isolate Rhizosphere
173 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
174 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
175 2932401849 Devosia sp. 2618 Isolate Rhizosphere
176 639633007 Azoarcus olearius BH72 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.68
Metatranscriptomes 1.4
Isolates 4.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.46
Nodule 0
Rhizoplane 1.4
Rhizosphere 79.3
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316575_10005863 3300031665 Bacteria 4396
2 Ga0065703_1000508 3300005272 Bacteria 22681
3 Ga0070670_100000420 3300005331 Bacteria 34942
4 Ga0068869_100135628 3300005334 Bacteria 1896
5 Ga0070666_10085902 3300005335 Bacteria 2156
6 Ga0068868_100000481 3300005338 Bacteria 26493
7 Ga0070668_100135299 3300005347 Bacteria 1982
8 Ga0070669_100021747 3300005353 Bacteria 4586
9 Ga0070669_100144935 3300005353 Bacteria 1834
10 Ga0070675_100302622 3300005354 Bacteria 1409
11 Ga0070674_100052237 3300005356 Bacteria 2819
12 Ga0070673_100114654 3300005364 Bacteria 2240
13 Ga0070709_10022023 3300005434 Bacteria 3722
14 Ga0070709_10060339 3300005434 Bacteria 2411
15 Ga0070714_100009273 3300005435 Bacteria 7733
16 Ga0070713_100021531 3300005436 Bacteria 4961
17 Ga0070713_100072426 3300005436 Bacteria 2914
18 Ga0070710_10007724 3300005437 Bacteria 5215
19 Ga0070711_100051135 3300005439 Bacteria 2836
20 Ga0070700_100091396 3300005441 Bacteria 1987
21 Ga0070663_100132917 3300005455 Bacteria 1891
22 Ga0070678_100003894 3300005456 Bacteria 8388
23 Ga0070662_100163391 3300005457 Bacteria 1743
24 Ga0068867_100060439 3300005459 Bacteria 2811
25 Ga0070707_100416019 3300005468 Bacteria 1305
26 Ga0070698_100018399 3300005471 Bacteria 7356
27 Ga0070697_100064548 3300005536 Bacteria 2990
28 Ga0070672_100168646 3300005543 Bacteria 1820
29 Ga0068866_10008442 3300005718 Bacteria 4343
30 Ga0068851_10038948 3300005834 Bacteria 2387
31 Ga0068863_100012296 3300005841 Bacteria 8263
32 Ga0068862_100213810 3300005844 Bacteria 1743
33 Ga0070717_10002354 3300006028 Bacteria 13318
34 Ga0070716_100001986 3300006173 Bacteria 9318
35 Ga0070712_100005563 3300006175 Bacteria 7799
36 Ga0070712_100007102 3300006175 Bacteria 6987
37 Ga0068871_100034421 3300006358 Bacteria 4019
38 Ga0075436_100003228 3300006914 Bacteria 11183
39 Ga0099795_10004803 3300007788 Bacteria 3525
40 Ga0105240_10766206 3300009093 Bacteria 1048
41 Ga0111539_10181683 3300009094 Bacteria 2457
42 Ga0111539_10730607 3300009094 Bacteria 1153
43 Ga0105247_10072205 3300009101 Bacteria 2160
44 Ga0114129_10016582 3300009147 Bacteria 10494
45 Ga0105243_10000013 3300009148 Bacteria 275151
46 Ga0105242_10179537 3300009176 Bacteria 1867
47 Ga0105248_10054871 3300009177 Bacteria 4470
48 Ga0105246_10132227 3300011119 Bacteria 1865
49 Ga0157374_10090825 3300013296 Bacteria 2912
50 Ga0157378_10114792 3300013297 Bacteria 2474
51 Ga0157378_10328264 3300013297 Bacteria 1488
52 Ga0163162_10132882 3300013306 Bacteria 2598
53 Ga0163162_10396250 3300013306 Bacteria 1513
54 Ga0157375_10001103 3300013308 Bacteria 23426
55 Ga0213872_10004082 3300021361 Bacteria 7861
56 Ga0213875_10000803 3300021388 Bacteria 23497
57 Ga0213875_10019489 3300021388 Bacteria 3263
58 Ga0209676_1000019 3300025292 Bacteria 620012
59 Ga0209050_1035077 3300025298 Bacteria 1489
60 Ga0207696_1007805 3300025711 Bacteria 4149
61 Ga0207655_1001775 3300025728 Bacteria 18808
62 Ga0207713_1001257 3300025735 Bacteria 21014
63 Ga0207692_10182520 3300025898 Bacteria 1223
64 Ga0207693_10003326 3300025915 Bacteria 13758
65 Ga0207693_10025024 3300025915 Bacteria 4735
66 Ga0207693_10119997 3300025915 Bacteria 2065
67 Ga0207663_10068635 3300025916 Bacteria 2277
68 Ga0207649_10170345 3300025920 Bacteria 1516
69 Ga0207646_10369421 3300025922 Bacteria 1296
70 Ga0207681_10044019 3300025923 Bacteria 2990
71 Ga0207700_10039900 3300025928 Bacteria 3422
72 Ga0207700_10345956 3300025928 Bacteria 1294
73 Ga0207706_10120566 3300025933 Bacteria 2306
74 Ga0207709_10000001 3300025935 Bacteria 2228154
75 Ga0207665_10000689 3300025939 Bacteria 22862
76 Ga0207691_10027828 3300025940 Bacteria 5297
77 Ga0207689_10060327 3300025942 Bacteria 3119
78 Ga0207661_10009783 3300025944 Bacteria 6887
79 Ga0207668_10144762 3300025972 Bacteria 1832
80 Ga0207678_10183427 3300026067 Bacteria 1787
81 Ga0207708_10094779 3300026075 Bacteria 2305
82 Ga0207702_10110918 3300026078 Bacteria 2439
83 Ga0207648_10024719 3300026089 Bacteria 5358
84 Ga0207648_10060998 3300026089 Bacteria 3288
85 Ga0207683_10003424 3300026121 Bacteria 13820
86 Ga0207698_10054290 3300026142 Bacteria 3082
87 Ga0207698_10279993 3300026142 Bacteria 1542
88 Ga0209179_1001562 3300027512 Bacteria 2847
89 Ga0209588_1049119 3300027671 Bacteria 1365
90 Ga0265323_10007878 3300028653 Bacteria 4405
91 Ga0265336_10000497 3300028666 Bacteria 22985
92 Ga0265338_10008711 3300028800 Bacteria 12262
93 Ga0265338_10140504 3300028800 Bacteria 1892
94 Ga0265324_10000002 3300029957 Bacteria 382754
95 Ga0265324_10000616 3300029957 Bacteria 24232
96 Ga0265324_10009270 3300029957 Bacteria 3851
97 Ga0265332_10000010 3300031238 Bacteria 289041
98 Ga0265332_10057710 3300031238 Bacteria 1662
99 Ga0265328_10002556 3300031239 Bacteria 8144
100 Ga0265328_10021194 3300031239 Bacteria 2483
101 Ga0265325_10003075 3300031241 Bacteria 11027
102 Ga0265325_10005849 3300031241 Bacteria 7536
103 Ga0265331_10000070 3300031250 Bacteria 152331
104 Ga0265331_10004570 3300031250 Bacteria 8617
105 Ga0265331_10021910 3300031250 Bacteria 3264
106 Ga0265331_10025229 3300031250 Bacteria 3002
107 Ga0265327_10000103 3300031251 Bacteria 185405
108 Ga0265327_10000156 3300031251 Bacteria 146362
109 Ga0265327_10000800 3300031251 Bacteria 48175
110 Ga0265327_10003131 3300031251 Bacteria 16251
111 Ga0265327_10004834 3300031251 Bacteria 11673
112 Ga0265327_10014501 3300031251 Bacteria 5152
113 Ga0265327_10028883 3300031251 Bacteria 3162
114 Ga0265327_10096267 3300031251 Bacteria 1435
115 Ga0265316_10013488 3300031344 Bacteria 7253
116 Ga0265316_10016142 3300031344 Bacteria 6492
117 Ga0265316_10039910 3300031344 Bacteria 3767
118 Ga0307508_10029037 3300031616 Bacteria 5000
119 Ga0316575_10017841 3300031665 Bacteria 2700
120 Ga0316579_10000316 3300031691 Bacteria 14965
121 Ga0316579_10127840 3300031691 Bacteria 1223
122 Ga0265314_10001144 3300031711 Bacteria 30747
123 Ga0265314_10026149 3300031711 Bacteria 4389
124 Ga0316576_10016098 3300031727 Bacteria 5041
125 Ga0316576_10016502 3300031727 Bacteria 4990
126 Ga0316578_10000441 3300031728 Bacteria 13732
127 Ga0316578_10044663 3300031728 Bacteria 2578
128 Ga0316578_10098661 3300031728 Bacteria 1750
129 Ga0316577_10056710 3300031733 Bacteria 2187
130 Ga0316577_10118904 3300031733 Bacteria 1485
131 Ga0316583_10029023 3300032133 Bacteria 1973
132 Ga0316583_10047453 3300032133 Bacteria 1514
133 Ga0316593_10001128 3300032168 Bacteria 5644
134 Ga0316592_1000730 3300033524 Bacteria 4868
135 Ga0316596_1000143 3300033541 Bacteria 9827
136 Ga0316596_1001326 3300033541 Bacteria 4926
137 Ga0373949_0008566 3300035090 Bacteria 2237
138 Ga0373952_0000707 3300035092 Bacteria 5952
139 Ga0373957_0117103 3300035120 Bacteria 1076
140 Ga0373946_0149391 3300035171 Bacteria 1089
141 Ga0316574_0002536 3300035398 Bacteria 9186
142 Ga0316574_0026796 3300035398 Bacteria 3468
143 Ga0316574_0045491 3300035398 Bacteria 2718
144 Ga0316574_0271105 3300035398 Bacteria 1082
145 Ga0373927_0043696 3300035695 Bacteria 2900
146 Ga0373937_0011963 3300036401 Bacteria 7617
147 Ga0316582_0000140 3300036647 Bacteria 21435
148 Ga0316582_0151133 3300036647 Bacteria 1570
149 Ga0316584_0008057 3300036712 Bacteria 7235
150 Ga0316584_0099051 3300036712 Bacteria 2183
151 Ga0316584_0099429 3300036712 Bacteria 2178
152 Ga0316584_0221873 3300036712 Bacteria 1388
153 Ga0316584_0278996 3300036712 Bacteria 1215
154 Ga0436364_0049233 3300037853 Bacteria 32067
155 Ga0436364_0726709 3300037853 Bacteria 9508
156 Ga0436364_1361490 3300037853 Bacteria 1130
157 Ga0400484_08350 3300038725 Bacteria 14326
158 Ga0400484_36649 3300038725 Bacteria 28505
159 Ga0400490_00824 3300038726 Bacteria 2803
160 Ga0400490_19580 3300038726 Bacteria 58285
161 Ga0400490_20529 3300038726 Bacteria 24348
162 Ga0400490_40724 3300038726 Bacteria 13887
163 Ga0400490_46623 3300038726 Bacteria 40858
164 Ga0400490_52136 3300038726 Bacteria 70831
165 Ga0400490_56160 3300038726 Bacteria 6477
166 Ga0400491_13655 3300038727 Bacteria 10114
167 Ga0400485_17163 3300038735 Bacteria 43508
168 Ga0400485_19057 3300038735 Bacteria 21356
169 Ga0400488_02580 3300038741 Bacteria 3743
170 Ga0400488_29193 3300038741 Bacteria 3483
171 Ga0400488_32560 3300038741 Bacteria 18325
172 Ga0400488_49118 3300038741 Bacteria 3425
173 Ga0400488_60533 3300038741 Bacteria 10179
174 Ga0400486_01662 3300038742 Bacteria 43450
175 Ga0400486_02443 3300038742 Bacteria 5152
176 Ga0400486_26618 3300038742 Bacteria 1570
177 Ga0400486_28583 3300038742 Bacteria 22203
178 Ga0400483_131647 3300039062 Bacteria 2740
179 Ga0400483_142866 3300039062 Bacteria 2510
180 Ga0400483_168593 3300039062 Bacteria 26476
181 Ga0400483_232969 3300039062 Bacteria 14085
182 Ga0400483_287904 3300039062 Bacteria 22043
183 Ga0400487_13124 3300039110 Bacteria 55255
184 Ga0400487_17601 3300039110 Bacteria 48398
185 Ga0400487_24155 3300039110 Bacteria 1039
186 Ga0400487_27950 3300039110 Bacteria 76746
187 Ga0400487_31869 3300039110 Bacteria 11319
188 Ga0400487_40097 3300039110 Bacteria 7595
189 Ga0400487_51678 3300039110 Bacteria 12496
190 Ga0436360_0972062 3300039438 Bacteria 3759
191 Ga0436360_1276543 3300039438 Bacteria 5711
192 Ga0436361_0177173 3300039447 Bacteria 2644
193 Ga0439441_015208 3300042001 Bacteria 1358
194 Ga0451577_0000002 3300042876 Bacteria 1731375
195 Ga0451577_0000409 3300042876 Bacteria 77928
196 Ga0451577_0005199 3300042876 Bacteria 13390
197 Ga0451577_0031880 3300042876 Bacteria 4753
198 Ga0451577_0094429 3300042876 Bacteria 2671
199 Ga0451577_0219706 3300042876 Bacteria 1717
200 Ga0451577_0251886 3300042876 Bacteria 1598
201 Ga0453683_0000013 3300044673 Bacteria 371932
202 Ga0453684_0000002 3300044712 Bacteria 1731375
203 Ga0453684_0000005 3300044712 Bacteria 1431632
204 Ga0453684_0000006 3300044712 Bacteria 1364191
205 Ga0453684_0000031 3300044712 Bacteria 752632
206 Ga0453684_0000296 3300044712 Bacteria 211075
207 Ga0453684_0000716 3300044712 Bacteria 117287
208 Ga0453684_0001017 3300044712 Bacteria 90379
209 Ga0453684_0001170 3300044712 Bacteria 81366
210 Ga0453684_0006643 3300044712 Bacteria 21851
211 Ga0453684_0015392 3300044712 Bacteria 12108
212 Ga0453684_0036888 3300044712 Bacteria 6725
213 Ga0453684_0073986 3300044712 Bacteria 4292
214 Ga0451576_0000006 3300045051 Bacteria 949698
215 Ga0451576_0000037 3300045051 Bacteria 372173
216 Ga0451576_0000325 3300045051 Bacteria 115644
217 Ga0451576_0000335 3300045051 Bacteria 113806
218 Ga0451576_0002868 3300045051 Bacteria 24693
219 Ga0451576_0004754 3300045051 Bacteria 17430
220 Ga0451576_0005999 3300045051 Bacteria 15024
221 Ga0451576_0048333 3300045051 Bacteria 4469
222 Ga0451576_0059434 3300045051 Bacteria 3990
223 Ga0451576_0109427 3300045051 Bacteria 2875
224 Ga0451576_0110375 3300045051 Bacteria 2862
225 Ga0451576_0147480 3300045051 Bacteria 2453
226 Ga0495592_0053230 3300046454 Bacteria 3003
227 Ga0495662_0118294 3300046476 Bacteria 1300
228 Ga0495586_0061546 3300046535 Bacteria 2043
229 Ga0495586_0242153 3300046535 Bacteria 1028
230 Ga0495667_0014105 3300046559 Bacteria 5393
231 Ga0495634_0111712 3300046642 Bacteria 1757
232 Ga0495635_0010894 3300046663 Bacteria 6374
233 Ga0495636_0006512 3300047318 Bacteria 4591
234 Ga0495680_0066880 3300047322 Bacteria 2749
235 Ga0495681_0025672 3300047470 Bacteria 3079
236 Ga0496102_0098734 3300048905 Bacteria 2710
237 Ga0496102_0110222 3300048905 Bacteria 2566
238 Ga0496110_0000706 3300048913 Bacteria 23078
239 Ga0496114_0002564 3300048917 Bacteria 13881
240 Ga0496125_0000989 3300048928 Bacteria 44313
241 Ga0501031_0038792 3300049568 Bacteria 3108
242 Ga0501033_0129831 3300049570 Bacteria 1826
243 Ga0501037_0140719 3300049573 Bacteria 1727
244 Ga0501038_0017063 3300049574 Bacteria 6567
245 Ga0501038_0319514 3300049574 Bacteria 1215
246 Ga0501039_0011930 3300049575 Bacteria 6622
247 Ga0501040_0082319 3300049576 Bacteria 2231
248 Ga0501041_0006599 3300049577 Bacteria 6796
249 Ga0501043_0011764 3300049579 Bacteria 6853
250 Ga0501043_0071012 3300049579 Bacteria 2735
251 Ga0501048_0131437 3300049582 Bacteria 1769
252 Ga0501068_0091568 3300049584 Bacteria 1876
253 Ga0501070_0003078 3300049586 Bacteria 14519
254 Ga0501071_0033230 3300049587 Bacteria 3665
255 Ga0501072_0012069 3300049588 Bacteria 6602
256 Ga0501075_0000411 3300049591 Bacteria 24982
257 Ga0501076_0042151 3300049592 Bacteria 3593
258 Ga0501077_0037056 3300049593 Bacteria 3107
259 Ga0501080_0137059 3300049742 Bacteria 2264
260 Ga0501081_0005712 3300049743 Bacteria 8050
261 Ga0501035_0145469 3300049822 Bacteria 2059
262 Ga0501035_0316912 3300049822 Bacteria 1311
263 Ga0501045_0021953 3300049824 Bacteria 4568
264 Ga0495601_0013529 3300053077 Bacteria 4908
265 Ga0495619_0026851 3300053085 Bacteria 3706
266 Ga0500607_042799 3300053121 Bacteria 2444
267 Ga0500604_0001762 3300053151 Bacteria 6053
268 Ga0500622_0000002 3300053156 Bacteria 646442
269 Ga0500636_0000417 3300053177 Bacteria 23409
270 Ga0500625_025479 3300053729 Bacteria 2797
271 Ga0501082_0000382 3300060353 Bacteria 39449
272 2524610902 2524023250 Bacteria 5457705
273 2526212584 2526164512 Bacteria 4025691
274 2547371445 2547132103 Bacteria 5115736
275 2548847519 2547132512 Bacteria 3416496
276 2574430432 2574179768 Bacteria 4907129
277 2678232076 2675903507 Bacteria 3737791
278 2774389803 2773857761 Bacteria 3837365
279 2774436457 2773857770 Bacteria 3911866
280 2843695311 2843690924 Bacteria 5169057
281 2846037631 2846033681 Bacteria 4377894
282 2846041846 2846037992 Bacteria 4526407
283 2891634264 2891633521 Bacteria 4602265
284 2932403380 2932401849 Bacteria 4262978
285 639788048 639633007 Bacteria 4376040
286 Ga0316575_10005863
287 Ga0065703_1000508
288 Ga0070670_100000420
289 Ga0068869_100135628
290 Ga0070666_10085902
291 Ga0068868_100000481
292 Ga0070668_100135299
293 Ga0070669_100021747
294 Ga0070669_100144935
295 Ga0070675_100302622
296 Ga0070674_100052237
297 Ga0070673_100114654
298 Ga0070709_10022023
299 Ga0070709_10060339
300 Ga0070714_100009273
301 Ga0070713_100021531
302 Ga0070713_100072426
303 Ga0070710_10007724
304 Ga0070711_100051135
305 Ga0070700_100091396
306 Ga0070663_100132917
307 Ga0070678_100003894
308 Ga0070662_100163391
309 Ga0068867_100060439
310 Ga0070707_100416019
311 Ga0070698_100018399
312 Ga0070697_100064548
313 Ga0070672_100168646
314 Ga0068866_10008442
315 Ga0068851_10038948
316 Ga0068863_100012296
317 Ga0068862_100213810
318 Ga0070717_10002354
319 Ga0070716_100001986
320 Ga0070712_100005563
321 Ga0070712_100007102
322 Ga0068871_100034421
323 Ga0075436_100003228
324 Ga0099795_10004803
325 Ga0105240_10766206
326 Ga0111539_10181683
327 Ga0111539_10730607
328 Ga0105247_10072205
329 Ga0114129_10016582
330 Ga0105243_10000013
331 Ga0105242_10179537
332 Ga0105248_10054871
333 Ga0105246_10132227
334 Ga0157374_10090825
335 Ga0157378_10114792
336 Ga0157378_10328264
337 Ga0163162_10132882
338 Ga0163162_10396250
339 Ga0157375_10001103
340 Ga0213872_10004082
341 Ga0213875_10000803
342 Ga0213875_10019489
343 Ga0209676_1000019
344 Ga0209050_1035077
345 Ga0207696_1007805
346 Ga0207655_1001775
347 Ga0207713_1001257
348 Ga0207692_10182520
349 Ga0207693_10003326
350 Ga0207693_10025024
351 Ga0207693_10119997
352 Ga0207663_10068635
353 Ga0207649_10170345
354 Ga0207646_10369421
355 Ga0207681_10044019
356 Ga0207700_10039900
357 Ga0207700_10345956
358 Ga0207706_10120566
359 Ga0207709_10000001
360 Ga0207665_10000689
361 Ga0207691_10027828
362 Ga0207689_10060327
363 Ga0207661_10009783
364 Ga0207668_10144762
365 Ga0207678_10183427
366 Ga0207708_10094779
367 Ga0207702_10110918
368 Ga0207648_10024719
369 Ga0207648_10060998
370 Ga0207683_10003424
371 Ga0207698_10054290
372 Ga0207698_10279993
373 Ga0209179_1001562
374 Ga0209588_1049119
375 Ga0265323_10007878
376 Ga0265336_10000497
377 Ga0265338_10008711
378 Ga0265338_10140504
379 Ga0265324_10000002
380 Ga0265324_10000616
381 Ga0265324_10009270
382 Ga0265332_10000010
383 Ga0265332_10057710
384 Ga0265328_10002556
385 Ga0265328_10021194
386 Ga0265325_10003075
387 Ga0265325_10005849
388 Ga0265331_10000070
389 Ga0265331_10004570
390 Ga0265331_10021910
391 Ga0265331_10025229
392 Ga0265327_10000103
393 Ga0265327_10000156
394 Ga0265327_10000800
395 Ga0265327_10003131
396 Ga0265327_10004834
397 Ga0265327_10014501
398 Ga0265327_10028883
399 Ga0265327_10096267
400 Ga0265316_10013488
401 Ga0265316_10016142
402 Ga0265316_10039910
403 Ga0307508_10029037
404 Ga0316575_10017841
405 Ga0316579_10000316
406 Ga0316579_10127840
407 Ga0265314_10001144
408 Ga0265314_10026149
409 Ga0316576_10016098
410 Ga0316576_10016502
411 Ga0316578_10000441
412 Ga0316578_10044663
413 Ga0316578_10098661
414 Ga0316577_10056710
415 Ga0316577_10118904
416 Ga0316583_10029023
417 Ga0316583_10047453
418 Ga0316593_10001128
419 Ga0316592_1000730
420 Ga0316596_1000143
421 Ga0316596_1001326
422 Ga0373949_0008566
423 Ga0373952_0000707
424 Ga0373957_0117103
425 Ga0373946_0149391
426 Ga0316574_0002536
427 Ga0316574_0026796
428 Ga0316574_0045491
429 Ga0316574_0271105
430 Ga0373927_0043696
431 Ga0373937_0011963
432 Ga0316582_0000140
433 Ga0316582_0151133
434 Ga0316584_0008057
435 Ga0316584_0099051
436 Ga0316584_0099429
437 Ga0316584_0221873
438 Ga0316584_0278996
439 Ga0436364_0049233
440 Ga0436364_0726709
441 Ga0436364_1361490
442 Ga0400484_08350
443 Ga0400484_36649
444 Ga0400490_00824
445 Ga0400490_19580
446 Ga0400490_20529
447 Ga0400490_40724
448 Ga0400490_46623
449 Ga0400490_52136
450 Ga0400490_56160
451 Ga0400491_13655
452 Ga0400485_17163
453 Ga0400485_19057
454 Ga0400488_02580
455 Ga0400488_29193
456 Ga0400488_32560
457 Ga0400488_49118
458 Ga0400488_60533
459 Ga0400486_01662
460 Ga0400486_02443
461 Ga0400486_26618
462 Ga0400486_28583
463 Ga0400483_131647
464 Ga0400483_142866
465 Ga0400483_168593
466 Ga0400483_232969
467 Ga0400483_287904
468 Ga0400487_13124
469 Ga0400487_17601
470 Ga0400487_24155
471 Ga0400487_27950
472 Ga0400487_31869
473 Ga0400487_40097
474 Ga0400487_51678
475 Ga0436360_0972062
476 Ga0436360_1276543
477 Ga0436361_0177173
478 Ga0439441_015208
479 Ga0451577_0000002
480 Ga0451577_0000409
481 Ga0451577_0005199
482 Ga0451577_0031880
483 Ga0451577_0094429
484 Ga0451577_0219706
485 Ga0451577_0251886
486 Ga0453683_0000013
487 Ga0453684_0000002
488 Ga0453684_0000005
489 Ga0453684_0000006
490 Ga0453684_0000031
491 Ga0453684_0000296
492 Ga0453684_0000716
493 Ga0453684_0001017
494 Ga0453684_0001170
495 Ga0453684_0006643
496 Ga0453684_0015392
497 Ga0453684_0036888
498 Ga0453684_0073986
499 Ga0451576_0000006
500 Ga0451576_0000037
501 Ga0451576_0000325
502 Ga0451576_0000335
503 Ga0451576_0002868
504 Ga0451576_0004754
505 Ga0451576_0005999
506 Ga0451576_0048333
507 Ga0451576_0059434
508 Ga0451576_0109427
509 Ga0451576_0110375
510 Ga0451576_0147480
511 Ga0495592_0053230
512 Ga0495662_0118294
513 Ga0495586_0061546
514 Ga0495586_0242153
515 Ga0495667_0014105
516 Ga0495634_0111712
517 Ga0495635_0010894
518 Ga0495636_0006512
519 Ga0495680_0066880
520 Ga0495681_0025672
521 Ga0496102_0098734
522 Ga0496102_0110222
523 Ga0496110_0000706
524 Ga0496114_0002564
525 Ga0496125_0000989
526 Ga0501031_0038792
527 Ga0501033_0129831
528 Ga0501037_0140719
529 Ga0501038_0017063
530 Ga0501038_0319514
531 Ga0501039_0011930
532 Ga0501040_0082319
533 Ga0501041_0006599
534 Ga0501043_0011764
535 Ga0501043_0071012
536 Ga0501048_0131437
537 Ga0501068_0091568
538 Ga0501070_0003078
539 Ga0501071_0033230
540 Ga0501072_0012069
541 Ga0501075_0000411
542 Ga0501076_0042151
543 Ga0501077_0037056
544 Ga0501080_0137059
545 Ga0501081_0005712
546 Ga0501035_0145469
547 Ga0501035_0316912
548 Ga0501045_0021953
549 Ga0495601_0013529
550 Ga0495619_0026851
551 Ga0500607_042799
552 Ga0500604_0001762
553 Ga0500622_0000002
554 Ga0500636_0000417
555 Ga0500625_025479
556 Ga0501082_0000382
557 2524610902
558 2526212584
559 2547371445
560 2548847519
561 2574430432
562 2678232076
563 2774389803
564 2774436457
565 2843695311
566 2846037631
567 2846041846
568 2891634264
569 2932403380
570 639788048

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01207

Dus

Dihydrouridine synthase (Dus)

60

368

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ei9-assembly2.cif.gz_B crystal structure of e. coli trna-dihydrouridine synthase b (dusb) 0.9694 1 318
1vhn-assembly1.cif.gz_A crystal structure of a putative flavin oxidoreductase with flavin 0.9452 10 320
6ei9-assembly2.cif.gz_B crystal structure of e. coli trna-dihydrouridine synthase b (dusb) 0.9445 1 318
1vhn-assembly1.cif.gz_A crystal structure of a putative flavin oxidoreductase with flavin 0.9393 10 320
4bfa-assembly2.cif.gz_B crystal structure of e. coli dihydrouridine synthase c (dusc) 0.8484 11 314
ID Description Score Start End Superfamily
af_P0ABT5_6_247_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9814 6 247 3.20.20.70
af_P0ABT5_6_247_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9774 6 247 3.20.20.70
af_P0ABT5_252_321_1.10.1200.80 Mainly Alpha;Orthogonal Bundle;Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A;Putative flavin oxidoreducatase; domain 2 0.9472 253 320 1.10.1200.80
af_Q9VIS4_253_495_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9429 10 239 3.20.20.70
1vhnA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9418 10 249 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A1I4YN15-F1-model_v4 tRNA-dihydrouridine synthase B (EC 1.3.1.-) 0.9935 1 322 GO:0000049
GO:0010181
GO:0017150
GO:0050660
AF-A0A844GC35-F1-model_v4 tRNA-dihydrouridine synthase B (EC 1.3.1.-) 0.9919 1 314 GO:0000049
GO:0010181
GO:0017150
GO:0050660
AF-A0A0B6RP09-F1-model_v4 tRNA-dihydrouridine synthase B (EC 1.3.1.-) 0.9888 2 325 GO:0000049
GO:0010181
GO:0017150
GO:0050660
AF-A0A381GYA8-F1-model_v4 deleted 0.9882 132 250
AF-A0A6B2QYG0-F1-model_v4 tRNA-dihydrouridine synthase B (EC 1.3.1.-) 0.9862 1 319 GO:0000049
GO:0010181
GO:0017150
GO:0050660

Map