F387124

General Info

Members Datasets Scaffolds Average Seq Length
285 183 570 330

Family's Representative Sequence

Representative Sequence 3300053156|Ga0500622_0096442|Ga0500622_0096442_58_1254
Length 398
Sequence MSGLAHPETLDRRRAMLRTAMGPAIAAALSDPRVIEIMVNPDGALRVDILGEGRVDTDVKLDAPQVERIIRLVASHVRAEVHAGAPIVSAEFPSRDEPQAGERFEGLLPPVSTAPCFSIRKPAARIYTLLDYIADGIATPAQADLLRRAVIDRRNILVCGGTSSGKTTLANALLAEMATLDERIILIEDTRELQCAAPDTVALRTRPGIVSMADLVRSTLRLRPDRIIVGEVRGPEALDMLKAWNTGHPGGIATVHANSAASALYRIEQLIQEAVVTVPRRLIAEAIDMIVFIAGRGLARRVDPQWPAGRGAHAAPYRDDGLSADDGRAGAGRRERPGRCSDAQWHRVAQSGCRGRASGATGHQPAPRADRQAAISDPEFDGGAIPVPIDRAGAPRAG

Samples

Sample ID Description Type Environment
1 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
9 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
108 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
120 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
123 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
124 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
127 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
128 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
135 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
136 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
137 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
138 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
144 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
152 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
155 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
156 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
157 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
160 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
161 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
162 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
163 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
164 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
165 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
166 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
167 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
168 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
169 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
170 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
171 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
172 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
173 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
174 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
175 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
176 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
177 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
178 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
179 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
180 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
181 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
182 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
183 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.09
Metatranscriptomes 0
Isolates 4.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.49
Nodule 0
Rhizoplane 2.81
Rhizosphere 67.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500622_0096442 3300053156 Bacteria 1461
2 SwRhRL2b_contig_1411643 2162886007 Bacteria 14515
3 JGI24741J21665_1006744 3300001915 Bacteria 2284
4 JGI24740J21852_10000467 3300001979 Bacteria 17377
5 JGI24740J21852_10017762 3300001979 Bacteria 2536
6 JGI24739J22299_10000303 3300001989 Bacteria 16724
7 JGI24739J22299_10007111 3300001989 Bacteria 4212
8 JGI24737J22298_10000127 3300001990 Bacteria 23226
9 JGI24737J22298_10000248 3300001990 Bacteria 17916
10 JGI24735J21928_10000302 3300002067 Bacteria 17212
11 JGI24735J21928_10000958 3300002067 Bacteria 10316
12 JGI24735J21928_10001291 3300002067 Bacteria 8889
13 JGI24738J21930_10000183 3300002075 Bacteria 16183
14 JGI24751J29686_10000185 3300002459 Bacteria 27999
15 JGI25165J46597_1000010 3300003214 Bacteria 442113
16 JGI25153J46596_10000007 3300003215 Bacteria 377573
17 Ga0055536_1000413 3300003781 Bacteria 30808
18 Ga0055530_10000644 3300003791 Bacteria 30033
19 Ga0065165_1008810 3300005262 Bacteria 4645
20 Ga0065704_10070537 3300005289 Bacteria 21359
21 Ga0070670_100000008 3300005331 Bacteria 292132
22 Ga0070660_100197305 3300005339 Bacteria 1632
23 Ga0070661_100000087 3300005344 Bacteria 74133
24 Ga0070661_100081954 3300005344 Bacteria 2382
25 Ga0070668_100344652 3300005347 Bacteria 1259
26 Ga0070669_100000192 3300005353 Bacteria 53873
27 Ga0070671_100000065 3300005355 Bacteria 71901
28 Ga0070659_100018044 3300005366 Bacteria 5321
29 Ga0070659_100109241 3300005366 Bacteria 2232
30 Ga0070708_100153987 3300005445 Bacteria 2139
31 Ga0070663_100207715 3300005455 Bacteria 1532
32 Ga0070662_100000574 3300005457 Bacteria 22427
33 Ga0070662_100006638 3300005457 Bacteria 7473
34 Ga0068853_100000873 3300005539 Bacteria 21069
35 Ga0068853_100002801 3300005539 Bacteria 13191
36 Ga0070665_100001233 3300005548 Bacteria 31079
37 Ga0068855_100002703 3300005563 Bacteria 21855
38 Ga0068855_100031261 3300005563 Bacteria 6359
39 Ga0068855_100033419 3300005563 Bacteria 6138
40 Ga0068855_100083545 3300005563 Bacteria 3699
41 Ga0070664_100014301 3300005564 Bacteria 6471
42 Ga0068857_100010248 3300005577 Bacteria 8148
43 Ga0068857_100024416 3300005577 Bacteria 5321
44 Ga0068857_100062646 3300005577 Bacteria 3306
45 Ga0068857_100448089 3300005577 Bacteria 1206
46 Ga0068854_100000429 3300005578 Bacteria 26035
47 Ga0068854_100004661 3300005578 Bacteria 8648
48 Ga0068856_100284947 3300005614 Bacteria 1669
49 Ga0068852_100001458 3300005616 Bacteria 15978
50 Ga0068852_100102057 3300005616 Bacteria 2591
51 Ga0068859_100001206 3300005617 Bacteria 26384
52 Ga0068859_100003753 3300005617 Bacteria 15492
53 Ga0068864_100000027 3300005618 Bacteria 229759
54 Ga0068861_100000017 3300005719 Bacteria 78362
55 Ga0068861_100000124 3300005719 Bacteria 39677
56 Ga0068861_100000201 3300005719 Bacteria 31934
57 Ga0068851_10001082 3300005834 Bacteria 11814
58 Ga0068851_10123301 3300005834 Bacteria 1395
59 Ga0068851_10129789 3300005834 Bacteria 1362
60 Ga0068863_100000508 3300005841 Bacteria 39636
61 Ga0068862_100003566 3300005844 Bacteria 13326
62 Ga0075365_10000257 3300006038 Bacteria 18222
63 Ga0075368_10000089 3300006042 Bacteria 22773
64 Ga0075363_100000275 3300006048 Bacteria 14868
65 Ga0075364_10000007 3300006051 Bacteria 73806
66 Ga0075364_10278381 3300006051 Bacteria 1138
67 Ga0075362_10000811 3300006177 Bacteria 9337
68 Ga0075367_10000162 3300006178 Bacteria 20993
69 Ga0075369_10008984 3300006186 Bacteria 3866
70 Ga0075366_10000227 3300006195 Bacteria 25083
71 Ga0075366_10000954 3300006195 Bacteria 14092
72 Ga0075370_10000371 3300006353 Bacteria 16477
73 Ga0075370_10058247 3300006353 Bacteria 2197
74 Ga0097620_100001206 3300006931 Bacteria 26384
75 Ga0097620_100003753 3300006931 Bacteria 15492
76 Ga0105251_10007296 3300009011 Bacteria 6845
77 Ga0105240_10000052 3300009093 Bacteria 232583
78 Ga0105240_10002001 3300009093 Bacteria 33626
79 Ga0105240_10005353 3300009093 Bacteria 19142
80 Ga0105240_10062659 3300009093 Bacteria 4629
81 Ga0105240_10087217 3300009093 Bacteria 3822
82 Ga0105240_10179268 3300009093 Bacteria 2502
83 Ga0105240_10265139 3300009093 Bacteria 1980
84 Ga0111539_10699937 3300009094 Bacteria 1179
85 Ga0105243_10221324 3300009148 Bacteria 1673
86 Ga0105248_10006066 3300009177 Bacteria 13266
87 Ga0105248_10153052 3300009177 Bacteria 2602
88 Ga0105237_10006206 3300009545 Bacteria 13327
89 Ga0105238_10001089 3300009551 Bacteria 27423
90 Ga0105238_10009276 3300009551 Bacteria 9848
91 Ga0105249_10051318 3300009553 Bacteria 3762
92 Ga0105239_10009359 3300010375 Bacteria 11057
93 Ga0105239_10039073 3300010375 Bacteria 5199
94 Ga0157373_10002657 3300013100 Bacteria 13561
95 Ga0157373_10009709 3300013100 Bacteria 7102
96 Ga0157371_10000011 3300013102 Bacteria 377608
97 Ga0157371_10001141 3300013102 Bacteria 28613
98 Ga0157370_10000266 3300013104 Bacteria 66475
99 Ga0157370_10000782 3300013104 Bacteria 39909
100 Ga0157370_10003021 3300013104 Bacteria 19971
101 Ga0157370_10006168 3300013104 Bacteria 13298
102 Ga0157369_10000203 3300013105 Bacteria 82075
103 Ga0157369_10000220 3300013105 Bacteria 79213
104 Ga0157369_10000632 3300013105 Bacteria 45648
105 Ga0157369_10007094 3300013105 Bacteria 12922
106 Ga0157369_10009285 3300013105 Bacteria 11249
107 Ga0157369_10504986 3300013105 Bacteria 1251
108 Ga0157374_10139566 3300013296 Bacteria 2352
109 Ga0157372_10002242 3300013307 Bacteria 20986
110 Ga0157372_10019001 3300013307 Bacteria 7397
111 Ga0157379_10000493 3300014968 Bacteria 32094
112 Ga0163161_10002136 3300017792 Bacteria 14256
113 Ga0163161_10014366 3300017792 Bacteria 5512
114 Ga0209147_100482 3300025229 Bacteria 24036
115 Ga0209148_1000393 3300025254 Bacteria 51591
116 Ga0209233_1000013 3300025261 Bacteria 1013785
117 Ga0209233_1000044 3300025261 Bacteria 489783
118 Ga0209455_1000373 3300025272 Bacteria 41116
119 Ga0209676_1000119 3300025292 Bacteria 201094
120 Ga0209758_1000017 3300025297 Bacteria 754393
121 Ga0209050_1000263 3300025298 Bacteria 112797
122 Ga0209051_1002421 3300025303 Bacteria 13412
123 Ga0209257_1002342 3300025304 Bacteria 19063
124 Ga0207656_10000454 3300025321 Bacteria 13714
125 Ga0207647_10002590 3300025904 Bacteria 13684
126 Ga0207647_10009079 3300025904 Bacteria 7079
127 Ga0207705_10059750 3300025909 Bacteria 2752
128 Ga0207695_10000122 3300025913 Bacteria 232677
129 Ga0207695_10001678 3300025913 Bacteria 35629
130 Ga0207695_10015586 3300025913 Bacteria 8941
131 Ga0207695_10029043 3300025913 Bacteria 6119
132 Ga0207671_10003299 3300025914 Bacteria 16238
133 Ga0207649_10000034 3300025920 Bacteria 136049
134 Ga0207649_10000077 3300025920 Bacteria 83350
135 Ga0207649_10003811 3300025920 Bacteria 8226
136 Ga0207649_10055729 3300025920 Bacteria 2466
137 Ga0207681_10000037 3300025923 Bacteria 154417
138 Ga0207694_10001992 3300025924 Bacteria 16904
139 Ga0207694_10002066 3300025924 Bacteria 16586
140 Ga0207694_10012867 3300025924 Bacteria 6302
141 Ga0207650_10000019 3300025925 Bacteria 344751
142 Ga0207650_10000020 3300025925 Bacteria 342596
143 Ga0207644_10000045 3300025931 Bacteria 105495
144 Ga0207690_10083065 3300025932 Bacteria 2242
145 Ga0207690_10359155 3300025932 Bacteria 1153
146 Ga0207706_10002199 3300025933 Bacteria 19005
147 Ga0207711_10041897 3300025941 Bacteria 3900
148 Ga0207711_10054698 3300025941 Bacteria 3426
149 Ga0207711_10192080 3300025941 Bacteria 1861
150 Ga0207679_10164929 3300025945 Bacteria 1818
151 Ga0207667_10000220 3300025949 Bacteria 80179
152 Ga0207667_10001647 3300025949 Bacteria 28143
153 Ga0207667_10018517 3300025949 Bacteria 7808
154 Ga0207667_10055240 3300025949 Bacteria 4175
155 Ga0207712_10027356 3300025961 Bacteria 3807
156 Ga0207668_10005413 3300025972 Bacteria 7520
157 Ga0207668_10326918 3300025972 Bacteria 1274
158 Ga0207640_10000073 3300025981 Bacteria 79417
159 Ga0207640_10006636 3300025981 Bacteria 6358
160 Ga0207640_10088213 3300025981 Bacteria 2141
161 Ga0207658_10004471 3300025986 Bacteria 9718
162 Ga0207639_10000779 3300026041 Bacteria 21675
163 Ga0207639_10002360 3300026041 Bacteria 12687
164 Ga0207639_10193062 3300026041 Bacteria 1741
165 Ga0207678_10126514 3300026067 Bacteria 2180
166 Ga0207702_10207515 3300026078 Bacteria 1820
167 Ga0207641_10000526 3300026088 Bacteria 42914
168 Ga0207676_10000022 3300026095 Bacteria 296286
169 Ga0207674_10000167 3300026116 Bacteria 78909
170 Ga0207674_10005761 3300026116 Bacteria 14694
171 Ga0207674_10007929 3300026116 Bacteria 12330
172 Ga0207674_10008186 3300026116 Bacteria 12120
173 Ga0207674_10428186 3300026116 Bacteria 1279
174 Ga0207675_100000018 3300026118 Bacteria 124200
175 Ga0207675_100000458 3300026118 Bacteria 39635
176 Ga0207675_100008477 3300026118 Bacteria 9683
177 Ga0207698_10001032 3300026142 Bacteria 16209
178 Ga0207698_10075400 3300026142 Bacteria 2696
179 Ga0209813_10000073 3300027866 Bacteria 37553
180 Ga0268266_10001295 3300028379 Bacteria 30426
181 Ga0307517_10018189 3300028786 Bacteria 9106
182 Ga0265338_10036817 3300028800 Bacteria 4673
183 Ga0265324_10005156 3300029957 Bacteria 5701
184 Ga0265328_10014127 3300031239 Bacteria 3148
185 Ga0265331_10002061 3300031250 Bacteria 13911
186 Ga0307408_100013256 3300031548 Bacteria 5471
187 Ga0307405_10034618 3300031731 Bacteria 3007
188 Ga0307414_10002329 3300032004 Bacteria 9921
189 Ga0307510_10017772 3300033180 Bacteria 8379
190 Ga0307510_10067051 3300033180 Bacteria 3618
191 Ga0395900_0002438 3300037418 Bacteria 20491
192 Ga0395900_0008506 3300037418 Bacteria 10551
193 Ga0395900_0032573 3300037418 Bacteria 5360
194 Ga0395898_0008957 3300037466 Bacteria 10537
195 Ga0395905_0000231 3300037471 Bacteria 84714
196 Ga0395905_0041328 3300037471 Bacteria 4327
197 Ga0436364_0380874 3300037853 Bacteria 90281
198 Ga0436364_0437118 3300037853 Bacteria 2104
199 Ga0395901_0001371 3300038443 Bacteria 25494
200 Ga0395901_0477607 3300038443 Bacteria 1272
201 Ga0466961_0002709 3300044693 Bacteria 11008
202 Ga0495627_000409 3300046453 Bacteria 37928
203 Ga0495650_0000160 3300046471 Bacteria 152374
204 Ga0495643_0000336 3300046522 Bacteria 64049
205 Ga0495648_0142697 3300046524 Bacteria 1258
206 Ga0495633_0000054 3300046558 Bacteria 151646
207 Ga0495625_0005533 3300046660 Bacteria 11480
208 Ga0495625_0054464 3300046660 Bacteria 2857
209 Ga0495677_0006550 3300047445 Bacteria 4399
210 Ga0495679_012024 3300047446 Bacteria 3315
211 Ga0496101_0221751 3300048904 Bacteria 1467
212 Ga0496102_0000117 3300048905 Bacteria 114037
213 Ga0496103_0000076 3300048906 Bacteria 113209
214 Ga0496105_0010365 3300048908 Bacteria 7327
215 Ga0496105_0185174 3300048908 Bacteria 1704
216 Ga0496110_0023209 3300048913 Bacteria 5275
217 Ga0496115_0063642 3300048918 Bacteria 2976
218 Ga0496116_0001044 3300048919 Bacteria 33756
219 Ga0496116_0023036 3300048919 Bacteria 4648
220 Ga0496117_0000201 3300048920 Bacteria 117679
221 Ga0496117_0047947 3300048920 Bacteria 3058
222 Ga0496118_0000097 3300048921 Bacteria 160837
223 Ga0496118_0021933 3300048921 Bacteria 5601
224 Ga0496118_0045870 3300048921 Bacteria 3405
225 Ga0496119_0005780 3300048922 Bacteria 11710
226 Ga0496119_0007936 3300048922 Bacteria 9446
227 Ga0496120_0011076 3300048923 Bacteria 6224
228 Ga0496120_0016607 3300048923 Bacteria 4807
229 Ga0496121_0011264 3300048924 Bacteria 9965
230 Ga0496121_0117886 3300048924 Bacteria 2010
231 Ga0496122_0001624 3300048925 Bacteria 35073
232 Ga0496122_0018777 3300048925 Bacteria 6360
233 Ga0496122_0073868 3300048925 Bacteria 2415
234 Ga0496123_0002778 3300048926 Bacteria 20862
235 Ga0496123_0034639 3300048926 Bacteria 3612
236 Ga0496124_0000011 3300048927 Bacteria 524145
237 Ga0496124_0000202 3300048927 Bacteria 117650
238 Ga0496124_0000469 3300048927 Bacteria 69682
239 Ga0496124_0009721 3300048927 Bacteria 9844
240 Ga0496124_0012826 3300048927 Bacteria 8232
241 Ga0496125_0003655 3300048928 Bacteria 18401
242 Ga0496125_0058458 3300048928 Bacteria 3114
243 Ga0496125_0207745 3300048928 Bacteria 1275
244 Ga0496126_0013951 3300048929 Bacteria 8151
245 Ga0501033_0109345 3300049570 Bacteria 2013
246 Ga0501036_0144348 3300049572 Bacteria 2008
247 Ga0501038_0024655 3300049574 Bacteria 5363
248 Ga0501043_0281495 3300049579 Bacteria 1275
249 Ga0501046_0080485 3300049580 Bacteria 2517
250 Ga0501047_0034332 3300049581 Bacteria 4897
251 Ga0501073_0121265 3300049589 Bacteria 1812
252 Ga0501281_00028 3300049777 Bacteria 17750
253 Ga0501044_0346342 3300049823 Bacteria 1406
254 nmdc:mga03683_161_c1 3300050489 Bacteria 22524
255 nmdc:mga03n38_3_c1 3300050490 Bacteria 77674
256 nmdc:mga00v17_29_c1 3300050491 Bacteria 89620
257 nmdc:mga0yw44_418_c1 3300050492 Bacteria 14894
258 nmdc:mga0k408_375_c1 3300050493 Bacteria 24427
259 nmdc:mga0k408_665_c1 3300050493 Bacteria 6956
260 nmdc:mga06z11_892_c1 3300050494 Bacteria 10868
261 nmdc:mga04h51_15_c1 3300050495 Bacteria 76646
262 nmdc:mga07m45_5_c2 3300050496 Bacteria 297012
263 nmdc:mga0sz30_132_c1 3300050516 Bacteria 27621
264 Ga0500651_0000777 3300053093 Bacteria 15594
265 Ga0500566_0005110 3300053094 Bacteria 7822
266 Ga0500559_0029094 3300053136 Bacteria 2364
267 Ga0500627_0003704 3300053158 Bacteria 4784
268 Ga0500627_0007255 3300053158 Bacteria 3845
269 Ga0500639_014485 3300053163 Bacteria 4149
270 Ga0500625_000016 3300053729 Bacteria 102090
271 Ga0500596_000378 3300053735 Bacteria 8101
272 2511124855 2510917020 Bacteria 5657507
273 2585154380 2582581280 Bacteria 5994497
274 2600204231 2599185354 Bacteria 4398675
275 2643751305 2643221545 Bacteria 5083237
276 2643823223 2643221560 Bacteria 4801179
277 2644510643 2643221691 Bacteria 5093099
278 2753767686 2751185897 Bacteria 5322941
279 2778125868 2775507255 Bacteria 3945731
280 2819713758 2818991466 Bacteria 4748179
281 2889918456 2889914905 Bacteria 5702301
282 2898331839 2898329390 Bacteria 5168154
283 2919142557 2919138771 Bacteria 5281312
284 2928529242 2928526807 Bacteria 4760224
285 8057105191 8057101203 Bacteria 5034064
286 Ga0500622_0096442
287 SwRhRL2b_contig_1411643
288 JGI24741J21665_1006744
289 JGI24740J21852_10000467
290 JGI24740J21852_10017762
291 JGI24739J22299_10000303
292 JGI24739J22299_10007111
293 JGI24737J22298_10000127
294 JGI24737J22298_10000248
295 JGI24735J21928_10000302
296 JGI24735J21928_10000958
297 JGI24735J21928_10001291
298 JGI24738J21930_10000183
299 JGI24751J29686_10000185
300 JGI25165J46597_1000010
301 JGI25153J46596_10000007
302 Ga0055536_1000413
303 Ga0055530_10000644
304 Ga0065165_1008810
305 Ga0065704_10070537
306 Ga0070670_100000008
307 Ga0070660_100197305
308 Ga0070661_100000087
309 Ga0070661_100081954
310 Ga0070668_100344652
311 Ga0070669_100000192
312 Ga0070671_100000065
313 Ga0070659_100018044
314 Ga0070659_100109241
315 Ga0070708_100153987
316 Ga0070663_100207715
317 Ga0070662_100000574
318 Ga0070662_100006638
319 Ga0068853_100000873
320 Ga0068853_100002801
321 Ga0070665_100001233
322 Ga0068855_100002703
323 Ga0068855_100031261
324 Ga0068855_100033419
325 Ga0068855_100083545
326 Ga0070664_100014301
327 Ga0068857_100010248
328 Ga0068857_100024416
329 Ga0068857_100062646
330 Ga0068857_100448089
331 Ga0068854_100000429
332 Ga0068854_100004661
333 Ga0068856_100284947
334 Ga0068852_100001458
335 Ga0068852_100102057
336 Ga0068859_100001206
337 Ga0068859_100003753
338 Ga0068864_100000027
339 Ga0068861_100000017
340 Ga0068861_100000124
341 Ga0068861_100000201
342 Ga0068851_10001082
343 Ga0068851_10123301
344 Ga0068851_10129789
345 Ga0068863_100000508
346 Ga0068862_100003566
347 Ga0075365_10000257
348 Ga0075368_10000089
349 Ga0075363_100000275
350 Ga0075364_10000007
351 Ga0075364_10278381
352 Ga0075362_10000811
353 Ga0075367_10000162
354 Ga0075369_10008984
355 Ga0075366_10000227
356 Ga0075366_10000954
357 Ga0075370_10000371
358 Ga0075370_10058247
359 Ga0097620_100001206
360 Ga0097620_100003753
361 Ga0105251_10007296
362 Ga0105240_10000052
363 Ga0105240_10002001
364 Ga0105240_10005353
365 Ga0105240_10062659
366 Ga0105240_10087217
367 Ga0105240_10179268
368 Ga0105240_10265139
369 Ga0111539_10699937
370 Ga0105243_10221324
371 Ga0105248_10006066
372 Ga0105248_10153052
373 Ga0105237_10006206
374 Ga0105238_10001089
375 Ga0105238_10009276
376 Ga0105249_10051318
377 Ga0105239_10009359
378 Ga0105239_10039073
379 Ga0157373_10002657
380 Ga0157373_10009709
381 Ga0157371_10000011
382 Ga0157371_10001141
383 Ga0157370_10000266
384 Ga0157370_10000782
385 Ga0157370_10003021
386 Ga0157370_10006168
387 Ga0157369_10000203
388 Ga0157369_10000220
389 Ga0157369_10000632
390 Ga0157369_10007094
391 Ga0157369_10009285
392 Ga0157369_10504986
393 Ga0157374_10139566
394 Ga0157372_10002242
395 Ga0157372_10019001
396 Ga0157379_10000493
397 Ga0163161_10002136
398 Ga0163161_10014366
399 Ga0209147_100482
400 Ga0209148_1000393
401 Ga0209233_1000013
402 Ga0209233_1000044
403 Ga0209455_1000373
404 Ga0209676_1000119
405 Ga0209758_1000017
406 Ga0209050_1000263
407 Ga0209051_1002421
408 Ga0209257_1002342
409 Ga0207656_10000454
410 Ga0207647_10002590
411 Ga0207647_10009079
412 Ga0207705_10059750
413 Ga0207695_10000122
414 Ga0207695_10001678
415 Ga0207695_10015586
416 Ga0207695_10029043
417 Ga0207671_10003299
418 Ga0207649_10000034
419 Ga0207649_10000077
420 Ga0207649_10003811
421 Ga0207649_10055729
422 Ga0207681_10000037
423 Ga0207694_10001992
424 Ga0207694_10002066
425 Ga0207694_10012867
426 Ga0207650_10000019
427 Ga0207650_10000020
428 Ga0207644_10000045
429 Ga0207690_10083065
430 Ga0207690_10359155
431 Ga0207706_10002199
432 Ga0207711_10041897
433 Ga0207711_10054698
434 Ga0207711_10192080
435 Ga0207679_10164929
436 Ga0207667_10000220
437 Ga0207667_10001647
438 Ga0207667_10018517
439 Ga0207667_10055240
440 Ga0207712_10027356
441 Ga0207668_10005413
442 Ga0207668_10326918
443 Ga0207640_10000073
444 Ga0207640_10006636
445 Ga0207640_10088213
446 Ga0207658_10004471
447 Ga0207639_10000779
448 Ga0207639_10002360
449 Ga0207639_10193062
450 Ga0207678_10126514
451 Ga0207702_10207515
452 Ga0207641_10000526
453 Ga0207676_10000022
454 Ga0207674_10000167
455 Ga0207674_10005761
456 Ga0207674_10007929
457 Ga0207674_10008186
458 Ga0207674_10428186
459 Ga0207675_100000018
460 Ga0207675_100000458
461 Ga0207675_100008477
462 Ga0207698_10001032
463 Ga0207698_10075400
464 Ga0209813_10000073
465 Ga0268266_10001295
466 Ga0307517_10018189
467 Ga0265338_10036817
468 Ga0265324_10005156
469 Ga0265328_10014127
470 Ga0265331_10002061
471 Ga0307408_100013256
472 Ga0307405_10034618
473 Ga0307414_10002329
474 Ga0307510_10017772
475 Ga0307510_10067051
476 Ga0395900_0002438
477 Ga0395900_0008506
478 Ga0395900_0032573
479 Ga0395898_0008957
480 Ga0395905_0000231
481 Ga0395905_0041328
482 Ga0436364_0380874
483 Ga0436364_0437118
484 Ga0395901_0001371
485 Ga0395901_0477607
486 Ga0466961_0002709
487 Ga0495627_000409
488 Ga0495650_0000160
489 Ga0495643_0000336
490 Ga0495648_0142697
491 Ga0495633_0000054
492 Ga0495625_0005533
493 Ga0495625_0054464
494 Ga0495677_0006550
495 Ga0495679_012024
496 Ga0496101_0221751
497 Ga0496102_0000117
498 Ga0496103_0000076
499 Ga0496105_0010365
500 Ga0496105_0185174
501 Ga0496110_0023209
502 Ga0496115_0063642
503 Ga0496116_0001044
504 Ga0496116_0023036
505 Ga0496117_0000201
506 Ga0496117_0047947
507 Ga0496118_0000097
508 Ga0496118_0021933
509 Ga0496118_0045870
510 Ga0496119_0005780
511 Ga0496119_0007936
512 Ga0496120_0011076
513 Ga0496120_0016607
514 Ga0496121_0011264
515 Ga0496121_0117886
516 Ga0496122_0001624
517 Ga0496122_0018777
518 Ga0496122_0073868
519 Ga0496123_0002778
520 Ga0496123_0034639
521 Ga0496124_0000011
522 Ga0496124_0000202
523 Ga0496124_0000469
524 Ga0496124_0009721
525 Ga0496124_0012826
526 Ga0496125_0003655
527 Ga0496125_0058458
528 Ga0496125_0207745
529 Ga0496126_0013951
530 Ga0501033_0109345
531 Ga0501036_0144348
532 Ga0501038_0024655
533 Ga0501043_0281495
534 Ga0501046_0080485
535 Ga0501047_0034332
536 Ga0501073_0121265
537 Ga0501281_00028
538 Ga0501044_0346342
539 nmdc:mga03683_161_c1
540 nmdc:mga03n38_3_c1
541 nmdc:mga00v17_29_c1
542 nmdc:mga0yw44_418_c1
543 nmdc:mga0k408_375_c1
544 nmdc:mga0k408_665_c1
545 nmdc:mga06z11_892_c1
546 nmdc:mga04h51_15_c1
547 nmdc:mga07m45_5_c2
548 nmdc:mga0sz30_132_c1
549 Ga0500651_0000777
550 Ga0500566_0005110
551 Ga0500559_0029094
552 Ga0500627_0003704
553 Ga0500627_0007255
554 Ga0500639_014485
555 Ga0500625_000016
556 Ga0500596_000378
557 2511124855
558 2585154380
559 2600204231
560 2643751305
561 2643823223
562 2644510643
563 2753767686
564 2778125868
565 2819713758
566 2889918456
567 2898331839
568 2919142557
569 2928529242
570 8057105191

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00437

T2SSE

Type II/IV secretion system protein

23

301

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2oap-assembly1.cif.gz_2 crystal structure of the archaeal secretion atpase gspe in complex with amp-pnp 0.8002 28 327
1nlz-assembly1.cif.gz_E crystal structure of unliganded traffic atpase of the type iv secretion system of helicobacter pylori 0.7715 17 302
6bge-assembly1.cif.gz_A helicobacter pylori atpase, hp0525, in complex with 1g2 compound 0.7619 5 302
3jc8-assembly1.cif.gz_Bd architectural model of the type iva pilus machine in a piliated state 0.7479 21 327
1nlz-assembly1.cif.gz_E crystal structure of unliganded traffic atpase of the type iv secretion system of helicobacter pylori 0.7264 17 302
ID Description Score Start End Superfamily
af_P9WMT3_116_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9123 120 319 3.40.50.300
4ihqC03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8832 127 320 3.40.50.300
af_Q58683_1_269_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8816 127 320 3.40.50.300
2gzaB01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.8735 17 124 3.30.450.90
2oap202 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8731 127 327 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7R8ZZ38-F1-model_v4 Uncharacterized protein 0.9909 142 272 GO:0016887
AF-A0A1V4WBH6-F1-model_v4 Putative conjugal transfer protein 0.9828 124 322 GO:0016887
AF-A0A1V4WBH6-F1-model_v4 Putative conjugal transfer protein 0.9779 124 322 GO:0016887
AF-A0A7R8ZZ38-F1-model_v4 Uncharacterized protein 0.9761 142 272 GO:0016887
AF-A0A259B9P5-F1-model_v4 P-type conjugative transfer ATPase TrbB 0.9543 188 330 GO:0016887

Map