F387441

General Info

Members Datasets Scaffolds Average Seq Length
286 171 286 457

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10030197|Ga0213875_100301972
Length 476
Sequence VPSVSTFADLGLEANILAAIHDVGYEAPSPIQEQAIPPLLEGLDVIGQAQTGSGKTAAFGLPMLQYVDPSDPEVQGLVLTPTRELCIQVTQALRTYGSRKGVDVVAVFGGAPIRSQQAQLRAGGHVVVGTVGRVKDLISRHALILNACRFVVLDEADEMLDLGFLEDVERILSLTPSSRQTALFSATIPPAIRRLADQYLLDPVTVKVRAATLTVDTVEQFALEVRPREKADRLVEVLEAERPEQAIVFVRTKVRCEQLFRTLRDRGMNVKALHGDMTQGARDGVMISFKEGRLPLLVATDVAARGLDISGVSHVINFDVPTSPDVYVHRIGRTARVGRSGRAITFFTRDQRRDIQAIEKHAGAKLAPWVKDAHVAPTSVRAKPRRHSKPHLSKSSEAPPHKLIVAGGRATGLEPSDVVHAITAATGLDGEAVRNVRVLERFTFVEVPRDEADRIVELVRGADLDGRKLRLEAAKV

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
52 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
92 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
93 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
94 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
95 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
96 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
97 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
101 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
102 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
109 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
110 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
111 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
112 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
113 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
114 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
115 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
116 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
117 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
118 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
119 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
120 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
121 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
125 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
126 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
127 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
128 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
129 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
130 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
131 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
132 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
138 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
139 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
142 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
143 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
144 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
145 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
148 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
149 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
150 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
151 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
152 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
153 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
154 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
160 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
161 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
170 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
171 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 11.89
Rhizosphere 76.22
Stem 0
Stem Tuber 0
Unclassified 11.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100010436 3300005329 Bacteria 7988
2 Ga0070683_100035093 3300005329 Bacteria 4585
3 Ga0070683_100066953 3300005329 Bacteria 3345
4 Ga0068869_100053236 3300005334 Bacteria 2941
5 Ga0070682_100008989 3300005337 Bacteria 5646
6 Ga0070682_100012420 3300005337 Bacteria 4885
7 Ga0068868_100048714 3300005338 Bacteria 3324
8 Ga0068868_100086667 3300005338 Bacteria 2517
9 Ga0070689_100035922 3300005340 Bacteria 3788
10 Ga0070661_100012741 3300005344 Bacteria 5886
11 Ga0070692_10014044 3300005345 Bacteria 3750
12 Ga0070669_100015772 3300005353 Bacteria 5388
13 Ga0070659_100000051 3300005366 Bacteria 97520
14 Ga0070659_100016996 3300005366 Bacteria 5469
15 Ga0070714_100000208 3300005435 Bacteria 47330
16 Ga0070714_100001061 3300005435 Bacteria 19635
17 Ga0070714_100011341 3300005435 Bacteria 7069
18 Ga0070714_100125522 3300005435 Bacteria 2288
19 Ga0070713_100029854 3300005436 Bacteria 4323
20 Ga0070713_100086395 3300005436 Bacteria 2689
21 Ga0070710_10000013 3300005437 Bacteria 117825
22 Ga0070710_10036506 3300005437 Bacteria 2687
23 Ga0070711_100014361 3300005439 Bacteria 4990
24 Ga0070705_100037862 3300005440 Bacteria 2724
25 Ga0070700_100007928 3300005441 Bacteria 5763
26 Ga0070678_100041381 3300005456 Bacteria 3266
27 Ga0070681_10006339 3300005458 Bacteria 11503
28 Ga0068867_100094657 3300005459 Bacteria 2272
29 Ga0068867_100160593 3300005459 Bacteria 1772
30 Ga0070679_100003242 3300005530 Bacteria 14866
31 Ga0070679_100027608 3300005530 Bacteria 5588
32 Ga0070684_100008279 3300005535 Bacteria 8126
33 Ga0070684_100108199 3300005535 Bacteria 2491
34 Ga0070686_100095912 3300005544 Bacteria 1993
35 Ga0070665_100020371 3300005548 Bacteria 6661
36 Ga0070664_100056690 3300005564 Bacteria 3329
37 Ga0068857_100143024 3300005577 Bacteria 2163
38 Ga0068856_100020639 3300005614 Bacteria 6401
39 Ga0068856_100059432 3300005614 Bacteria 3776
40 Ga0070702_100077393 3300005615 Bacteria 1982
41 Ga0068852_100004152 3300005616 Bacteria 10201
42 Ga0068852_100077349 3300005616 Bacteria 2941
43 Ga0068870_10031197 3300005840 Bacteria 2699
44 Ga0068858_100080680 3300005842 Bacteria 3023
45 Ga0081540_1000392 3300005983 Bacteria 43576
46 Ga0081539_10003524 3300005985 Bacteria 19060
47 Ga0081539_10033312 3300005985 Bacteria 3140
48 Ga0070717_10000028 3300006028 Bacteria 144976
49 Ga0070717_10014287 3300006028 Bacteria 6106
50 Ga0070717_10144219 3300006028 Bacteria 2056
51 Ga0070716_100059376 3300006173 Bacteria 2205
52 Ga0070712_100000005 3300006175 Bacteria 177449
53 Ga0070712_100067462 3300006175 Bacteria 2545
54 Ga0075428_100145324 3300006844 Bacteria 2578
55 Ga0075433_10023834 3300006852 Bacteria 5156
56 Ga0075429_100071115 3300006880 Bacteria 3029
57 Ga0075436_100112320 3300006914 Bacteria 1902
58 Ga0105240_10007499 3300009093 Bacteria 15829
59 Ga0105240_10240157 3300009093 Bacteria 2101
60 Ga0111539_10012025 3300009094 Bacteria 10855
61 Ga0105245_10052408 3300009098 Bacteria 3659
62 Ga0105245_10062323 3300009098 Bacteria 3365
63 Ga0105243_10030400 3300009148 Bacteria 4158
64 Ga0105243_10036206 3300009148 Bacteria 3829
65 Ga0105248_10095342 3300009177 Bacteria 3350
66 Ga0105237_10000431 3300009545 Bacteria 59607
67 Ga0105238_10036101 3300009551 Bacteria 5024
68 Ga0105249_10174289 3300009553 Bacteria 2088
69 Ga0105239_10021851 3300010375 Bacteria 7054
70 Ga0105239_10107546 3300010375 Bacteria 3090
71 Ga0105246_10042151 3300011119 Bacteria 3090
72 Ga0157370_10018405 3300013104 Bacteria 7027
73 Ga0157377_10017670 3300014745 Bacteria 3693
74 Ga0213873_10013026 3300021358 Bacteria 1816
75 Ga0213874_10000113 3300021377 Bacteria 13360
76 Ga0213874_10003463 3300021377 Bacteria 3501
77 Ga0213874_10015077 3300021377 Bacteria 2032
78 Ga0213876_10002193 3300021384 Bacteria 11517
79 Ga0213876_10020804 3300021384 Bacteria 3469
80 Ga0213876_10091866 3300021384 Bacteria 1607
81 Ga0213875_10000272 3300021388 Bacteria 51129
82 Ga0213875_10022456 3300021388 Bacteria 3017
83 Ga0213875_10030197 3300021388 Bacteria 2567
84 Ga0213875_10043013 3300021388 Bacteria 2121
85 Ga0207692_10000003 3300025898 Bacteria 431531
86 Ga0207688_10001198 3300025901 Bacteria 13408
87 Ga0207688_10041726 3300025901 Bacteria 2553
88 Ga0207645_10123372 3300025907 Bacteria 1683
89 Ga0207643_10019833 3300025908 Bacteria 3686
90 Ga0207707_10051701 3300025912 Bacteria 3578
91 Ga0207695_10006100 3300025913 Bacteria 15724
92 Ga0207671_10001590 3300025914 Bacteria 25816
93 Ga0207693_10000023 3300025915 Bacteria 127876
94 Ga0207693_10000659 3300025915 Bacteria 30961
95 Ga0207657_10028542 3300025919 Bacteria 5089
96 Ga0207657_10036405 3300025919 Bacteria 4405
97 Ga0207649_10049274 3300025920 Bacteria 2600
98 Ga0207649_10108595 3300025920 Bacteria 1849
99 Ga0207652_10028130 3300025921 Bacteria 4688
100 Ga0207652_10232866 3300025921 Bacteria 1660
101 Ga0207681_10017229 3300025923 Bacteria 4533
102 Ga0207694_10028161 3300025924 Bacteria 4283
103 Ga0207687_10016986 3300025927 Bacteria 4783
104 Ga0207700_10021624 3300025928 Bacteria 4396
105 Ga0207700_10053448 3300025928 Bacteria 3027
106 Ga0207700_10077625 3300025928 Bacteria 2581
107 Ga0207664_10000174 3300025929 Bacteria 50477
108 Ga0207664_10000931 3300025929 Bacteria 19665
109 Ga0207644_10028003 3300025931 Bacteria 3897
110 Ga0207690_10000054 3300025932 Bacteria 104097
111 Ga0207690_10033195 3300025932 Bacteria 3317
112 Ga0207706_10030590 3300025933 Bacteria 4801
113 Ga0207709_10063999 3300025935 Bacteria 2307
114 Ga0207665_10045625 3300025939 Bacteria 2935
115 Ga0207689_10093959 3300025942 Bacteria 2463
116 Ga0207661_10000300 3300025944 Bacteria 31413
117 Ga0207661_10001998 3300025944 Bacteria 14033
118 Ga0207661_10092597 3300025944 Bacteria 2520
119 Ga0207677_10034846 3300026023 Bacteria 3263
120 Ga0207677_10125180 3300026023 Bacteria 1941
121 Ga0207639_10130941 3300026041 Bacteria 2076
122 Ga0207678_10035472 3300026067 Bacteria 4342
123 Ga0207678_10042371 3300026067 Bacteria 3943
124 Ga0207708_10005998 3300026075 Bacteria 9002
125 Ga0207708_10016633 3300026075 Bacteria 5533
126 Ga0207702_10081251 3300026078 Bacteria 2814
127 Ga0207648_10015342 3300026089 Bacteria 7049
128 Ga0207676_10076926 3300026095 Bacteria 2698
129 Ga0207676_10117441 3300026095 Bacteria 2237
130 Ga0207674_10055500 3300026116 Bacteria 4027
131 Ga0207675_100061174 3300026118 Bacteria 3515
132 Ga0207675_100087790 3300026118 Bacteria 2921
133 Ga0207683_10010950 3300026121 Bacteria 7735
134 Ga0207698_10095808 3300026142 Bacteria 2444
135 Ga0207428_10079441 3300027907 Bacteria 2565
136 Ga0268266_10008865 3300028379 Bacteria 8905
137 Ga0265337_1001131 3300028556 Bacteria 13623
138 Ga0265326_10000003 3300028558 Bacteria 479811
139 Ga0265326_10000666 3300028558 Bacteria 12742
140 Ga0265319_1000065 3300028563 Bacteria 85273
141 Ga0265319_1000614 3300028563 Bacteria 23559
142 Ga0265334_10000001 3300028573 Bacteria 343037
143 Ga0265318_10000518 3300028577 Bacteria 27733
144 Ga0265322_10008491 3300028654 Bacteria 2991
145 Ga0265336_10000001 3300028666 Bacteria 916179
146 Ga0265336_10003386 3300028666 Bacteria 6266
147 Ga0265338_10000004 3300028800 Bacteria 644793
148 Ga0265338_10020952 3300028800 Bacteria 6841
149 Ga0265338_10039413 3300028800 Bacteria 4456
150 Ga0265340_10000002 3300031247 Bacteria 711693
151 Ga0265339_10009674 3300031249 Bacteria 6037
152 Ga0265327_10004804 3300031251 Bacteria 11731
153 Ga0307413_10011722 3300031824 Bacteria 4328
154 Ga0307406_10051695 3300031901 Bacteria 2610
155 Ga0307407_10020949 3300031903 Bacteria 3361
156 Ga0307409_100022718 3300031995 Bacteria 4327
157 Ga0373953_0008115 3300035117 Bacteria 3553
158 Ga0373937_0019020 3300036401 Bacteria 6145
159 Ga0373937_0023309 3300036401 Bacteria 5572
160 Ga0395900_0008751 3300037418 Bacteria 10397
161 Ga0395898_0000662 3300037466 Bacteria 62361
162 Ga0395898_0118527 3300037466 Bacteria 2536
163 Ga0436364_0067988 3300037853 Bacteria 2248
164 Ga0436364_0542710 3300037853 Bacteria 3082
165 Ga0436364_0546462 3300037853 Bacteria 18698
166 Ga0436364_0685870 3300037853 Bacteria 43862
167 Ga0436364_0703986 3300037853 Bacteria 8758
168 Ga0436364_0917657 3300037853 Bacteria 15528
169 Ga0436364_1502897 3300037853 Bacteria 2406
170 Ga0436364_1550107 3300037853 Bacteria 2809
171 Ga0436365_0001419 3300039437 Bacteria 10955
172 Ga0436365_0794906 3300039437 Bacteria 5147
173 Ga0436365_0986987 3300039437 Bacteria 8602
174 Ga0436365_1242127 3300039437 Bacteria 19090
175 Ga0436365_1301841 3300039437 Bacteria 8497
176 Ga0436365_1388320 3300039437 Bacteria 2349
177 Ga0436365_1579179 3300039437 Bacteria 2632
178 Ga0436365_1703501 3300039437 Bacteria 2157
179 Ga0436365_1908882 3300039437 Bacteria 3892
180 Ga0436363_0275177 3300039450 Bacteria 88978
181 Ga0436363_0702426 3300039450 Bacteria 5479
182 Ga0436363_1347247 3300039450 Bacteria 4117
183 Ga0436363_1512873 3300039450 Bacteria 2490
184 Ga0436362_0026443 3300039453 Bacteria 3196
185 Ga0436362_1293681 3300039453 Bacteria 3860
186 Ga0451833_0545480 3300041491 Bacteria 1634
187 Ga0466969_0021133 3300044656 Bacteria 3368
188 Ga0466969_0030909 3300044656 Bacteria 2727
189 Ga0466969_0034577 3300044656 Bacteria 2560
190 Ga0466961_0004576 3300044693 Bacteria 8683
191 Ga0466961_0012308 3300044693 Bacteria 5471
192 Ga0466963_0001879 3300044694 Bacteria 11450
193 Ga0466963_0004355 3300044694 Bacteria 8220
194 Ga0466963_0009481 3300044694 Bacteria 5863
195 Ga0466964_0005604 3300044706 Bacteria 4666
196 Ga0466964_0053422 3300044706 Bacteria 1663
197 Ga0466971_0037294 3300044719 Bacteria 2178
198 Ga0466968_0003554 3300044735 Bacteria 5767
199 Ga0466968_0025047 3300044735 Bacteria 2442
200 Ga0466968_0042139 3300044735 Bacteria 1929
201 Ga0466970_0063608 3300044765 Bacteria 1978
202 Ga0466957_0010672 3300044842 Bacteria 5280
203 Ga0466959_0002586 3300045049 Bacteria 11620
204 Ga0466959_0003853 3300045049 Bacteria 9951
205 Ga0466959_0011503 3300045049 Bacteria 6361
206 Ga0466958_0004486 3300045836 Bacteria 7369
207 Ga0466958_0008632 3300045836 Bacteria 5657
208 Ga0466958_0015496 3300045836 Bacteria 4368
209 Ga0466958_0025430 3300045836 Bacteria 3492
210 Ga0466958_0029937 3300045836 Bacteria 3230
211 Ga0466958_0035710 3300045836 Bacteria 2970
212 Ga0466958_0042163 3300045836 Bacteria 2747
213 Ga0466958_0052459 3300045836 Bacteria 2472
214 Ga0466967_0001214 3300045976 Bacteria 14522
215 Ga0466967_0134520 3300045976 Bacteria 2298
216 Ga0495629_0178621 3300046459 Bacteria 1472
217 Ga0495651_0012367 3300046462 Bacteria 6579
218 Ga0495653_0014290 3300046463 Bacteria 6474
219 Ga0495653_0069641 3300046463 Bacteria 2635
220 Ga0495664_0000073 3300046477 Bacteria 49243
221 Ga0495608_0025060 3300046511 Bacteria 4073
222 Ga0495608_0049568 3300046511 Bacteria 2788
223 Ga0495618_0013772 3300046514 Bacteria 4920
224 Ga0495631_0036672 3300046518 Bacteria 2189
225 Ga0495652_0039819 3300046529 Bacteria 4063
226 Ga0495652_0080457 3300046529 Bacteria 2691
227 Ga0495587_0088230 3300046536 Bacteria 1794
228 Ga0495667_0030182 3300046559 Bacteria 3645
229 Ga0495635_0007025 3300046663 Bacteria 7866
230 Ga0495657_0055079 3300046675 Bacteria 2654
231 Ga0495646_0044788 3300046680 Bacteria 2704
232 Ga0495600_0040686 3300046809 Bacteria 3028
233 Ga0495604_0003567 3300047317 Bacteria 12404
234 Ga0495674_0011584 3300047319 Bacteria 8318
235 Ga0495674_0138035 3300047319 Bacteria 2051
236 Ga0495676_0044071 3300047321 Bacteria 3645
237 Ga0495680_0015185 3300047322 Bacteria 6649
238 Ga0495675_0063985 3300047444 Bacteria 2327
239 Ga0495684_0002822 3300047471 Bacteria 13698
240 Ga0495602_0014363 3300048088 Bacteria 8042
241 Ga0496100_0000151 3300048903 Bacteria 38615
242 Ga0496100_0003999 3300048903 Bacteria 7751
243 Ga0496100_0028251 3300048903 Bacteria 3458
244 Ga0496101_0001252 3300048904 Bacteria 15196
245 Ga0496101_0002079 3300048904 Bacteria 12198
246 Ga0496102_0000040 3300048905 Bacteria 196737
247 Ga0496102_0015931 3300048905 Bacteria 6560
248 Ga0496102_0072593 3300048905 Bacteria 3163
249 Ga0496103_0000294 3300048906 Bacteria 46122
250 Ga0496104_0000006 3300048907 Bacteria 536446
251 Ga0496104_0015646 3300048907 Bacteria 6879
252 Ga0496104_0080101 3300048907 Bacteria 3113
253 Ga0496104_0249501 3300048907 Bacteria 1688
254 Ga0496105_0090928 3300048908 Bacteria 2521
255 Ga0496106_0004063 3300048909 Bacteria 10918
256 Ga0496106_0103628 3300048909 Bacteria 2208
257 Ga0496107_0012710 3300048910 Bacteria 5881
258 Ga0496107_0040033 3300048910 Bacteria 3363
259 Ga0496107_0116546 3300048910 Bacteria 1966
260 Ga0496109_0010016 3300048912 Bacteria 8093
261 Ga0496109_0153376 3300048912 Bacteria 2157
262 Ga0496109_0192795 3300048912 Bacteria 1915
263 Ga0496110_0000044 3300048913 Bacteria 61218
264 Ga0496110_0029727 3300048913 Bacteria 4706
265 Ga0496110_0051462 3300048913 Bacteria 3619
266 Ga0496111_0000304 3300048914 Bacteria 24108
267 Ga0496112_0002594 3300048915 Bacteria 14597
268 Ga0496112_0004482 3300048915 Bacteria 11846
269 Ga0496112_0128803 3300048915 Bacteria 2501
270 Ga0496113_0045474 3300048916 Bacteria 3256
271 Ga0496114_0241596 3300048917 Bacteria 1588
272 Ga0496115_0000059 3300048918 Bacteria 102022
273 Ga0496115_0000087 3300048918 Bacteria 86513
274 Ga0496115_0016746 3300048918 Bacteria 5586
275 Ga0496121_0003922 3300048924 Bacteria 20624
276 Ga0496124_0034827 3300048927 Bacteria 4412
277 nmdc:mga09592_63287_c1 3300050508 Bacteria 3131
278 nmdc:mga06r32_35394_c1 3300050510 Bacteria 4712
279 nmdc:mga08y16_59719_c1 3300050511 Bacteria 3983
280 nmdc:mga0n895_264631_c1 3300050512 Bacteria 1745
281 nmdc:mga0rr50_42766_c1 3300050513 Bacteria 3311
282 Ga0495601_0016278 3300053077 Bacteria 4505
283 Ga0495619_0002014 3300053085 Bacteria 13507
284 Ga0466962_0002728 3300061719 Bacteria 8387
285 Ga0466962_0032902 3300061719 Bacteria 2481
286 Ga0466962_0038490 3300061719 Bacteria 2290

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039437 Ga0436365_1703501 Ga0436365_1703501_894_2138 366
2 3300044735 Ga0466968_0042139 Ga0466968_0042139_723_1919 371
3 3300048917 Ga0496114_0241596 Ga0496114_0241596_373_1572 372
4 3300046459 Ga0495629_0178621 Ga0495629_0178621_200_1444 387
5 3300021388 Ga0213875_10043013 Ga0213875_100430132 393
6 3300037853 Ga0436364_0546462 Ga0436364_0546462_13030_14328 405
7 3300048908 Ga0496105_0090928 Ga0496105_0090928_766_2097 415
8 3300021384 Ga0213876_10091866 Ga0213876_100918662 418
9 3300021388 Ga0213875_10022456 Ga0213875_100224562 418
10 3300037853 Ga0436364_0703986 Ga0436364_0703986_2281_3702 418
11 3300039437 Ga0436365_0001419 Ga0436365_0001419_6065_7486 418
12 3300037853 Ga0436364_1502897 Ga0436364_1502897_631_2052 425
13 3300041491 Ga0451833_0545480 Ga0451833_0545480_85_1509 427
14 3300045049 Ga0466959_0003853 Ga0466959_0003853_940_2340 429
15 3300045836 Ga0466958_0015496 Ga0466958_0015496_2751_4151 429
16 3300048903 Ga0496100_0000151 Ga0496100_0000151_31325_32761 429
17 3300048904 Ga0496101_0001252 Ga0496101_0001252_12857_14293 429
18 3300005985 Ga0081539_10003524 Ga0081539_1000352411 430
19 3300005548 Ga0070665_100020371 Ga0070665_1000203717 432
20 3300026067 Ga0207678_10035472 Ga0207678_100354722 432
21 3300028379 Ga0268266_10008865 Ga0268266_100088652 432
22 3300048918 Ga0496115_0000087 Ga0496115_0000087_80275_81705 433
23 3300044735 Ga0466968_0003554 Ga0466968_0003554_989_2398 434
24 3300044765 Ga0466970_0063608 Ga0466970_0063608_341_1750 434
25 3300005329 Ga0070683_100035093 Ga0070683_1000350933 435
26 3300005334 Ga0068869_100053236 Ga0068869_1000532362 435
27 3300005337 Ga0070682_100008989 Ga0070682_1000089895 435
28 3300005338 Ga0068868_100086667 Ga0068868_1000866671 435
29 3300005441 Ga0070700_100007928 Ga0070700_1000079283 435
30 3300005456 Ga0070678_100041381 Ga0070678_1000413812 435
31 3300005459 Ga0068867_100160593 Ga0068867_1001605932 435
32 3300005535 Ga0070684_100108199 Ga0070684_1001081993 435
33 3300005577 Ga0068857_100143024 Ga0068857_1001430241 435
34 3300005614 Ga0068856_100059432 Ga0068856_1000594325 435
35 3300005616 Ga0068852_100077349 Ga0068852_1000773492 435
36 3300009177 Ga0105248_10095342 Ga0105248_100953423 435
37 3300010375 Ga0105239_10021851 Ga0105239_100218516 435
38 3300011119 Ga0105246_10042151 Ga0105246_100421512 435
39 3300014745 Ga0157377_10017670 Ga0157377_100176702 435
40 3300025901 Ga0207688_10001198 Ga0207688_100011988 435
41 3300025920 Ga0207649_10108595 Ga0207649_101085951 435
42 3300025933 Ga0207706_10030590 Ga0207706_100305903 435
43 3300025942 Ga0207689_10093959 Ga0207689_100939593 435
44 3300025944 Ga0207661_10092597 Ga0207661_100925972 435
45 3300026041 Ga0207639_10130941 Ga0207639_101309411 435
46 3300026075 Ga0207708_10016633 Ga0207708_100166333 435
47 3300026078 Ga0207702_10081251 Ga0207702_100812512 435
48 3300026095 Ga0207676_10076926 Ga0207676_100769263 435
49 3300026118 Ga0207675_100087790 Ga0207675_1000877904 435
50 3300026121 Ga0207683_10010950 Ga0207683_100109502 435
51 3300037418 Ga0395900_0008751 Ga0395900_0008751_8338_9765 435
52 3300037466 Ga0395898_0000662 Ga0395898_0000662_60344_61771 435
53 3300037466 Ga0395898_0118527 Ga0395898_0118527_193_1614 435
54 3300048905 Ga0496102_0072593 Ga0496102_0072593_184_1605 435
55 3300048907 Ga0496104_0080101 Ga0496104_0080101_1042_2463 435
56 3300048909 Ga0496106_0103628 Ga0496106_0103628_614_2035 435
57 3300048910 Ga0496107_0040033 Ga0496107_0040033_1401_2822 435
58 3300048913 Ga0496110_0029727 Ga0496110_0029727_635_2056 435
59 3300006844 Ga0075428_100145324 Ga0075428_1001453243 438
60 3300006852 Ga0075433_10023834 Ga0075433_100238345 438
61 3300006914 Ga0075436_100112320 Ga0075436_1001123202 438
62 3300027907 Ga0207428_10079441 Ga0207428_100794413 438
63 3300036401 Ga0373937_0019020 Ga0373937_0019020_820_2253 438
64 3300046511 Ga0495608_0049568 Ga0495608_0049568_723_2156 438
65 3300050510 nmdc:mga06r32_35394_c1 nmdc:mga06r32_35394_c1_3124_4545 438
66 3300050511 nmdc:mga08y16_59719_c1 nmdc:mga08y16_59719_c1_802_2223 438
67 3300050512 nmdc:mga0n895_264631_c1 nmdc:mga0n895_264631_c1_272_1693 438
68 3300050513 nmdc:mga0rr50_42766_c1 nmdc:mga0rr50_42766_c1_815_2236 438
69 3300053085 Ga0495619_0002014 Ga0495619_0002014_2450_3883 438
70 3300044735 Ga0466968_0025047 Ga0466968_0025047_924_2345 439
71 3300025939 Ga0207665_10045625 Ga0207665_100456253 440
72 3300031824 Ga0307413_10011722 Ga0307413_100117223 440
73 3300031901 Ga0307406_10051695 Ga0307406_100516953 440
74 3300031903 Ga0307407_10020949 Ga0307407_100209493 440
75 3300031995 Ga0307409_100022718 Ga0307409_1000227181 440
76 3300009545 Ga0105237_10000431 Ga0105237_1000043128 441
77 3300025914 Ga0207671_10001590 Ga0207671_1000159013 441
78 3300028800 Ga0265338_10039413 Ga0265338_100394133 441
79 3300047471 Ga0495684_0002822 Ga0495684_0002822_9957_11387 441
80 3300046518 Ga0495631_0036672 Ga0495631_0036672_351_1865 442
81 3300009094 Ga0111539_10012025 Ga0111539_100120257 443
82 3300048910 Ga0496107_0012710 Ga0496107_0012710_853_2268 444
83 3300005353 Ga0070669_100015772 Ga0070669_1000157725 445
84 3300005440 Ga0070705_100037862 Ga0070705_1000378622 445
85 3300006880 Ga0075429_100071115 Ga0075429_1000711153 445
86 3300009093 Ga0105240_10007499 Ga0105240_1000749916 445
87 3300021358 Ga0213873_10013026 Ga0213873_100130262 445
88 3300025913 Ga0207695_10006100 Ga0207695_100061002 445
89 3300025923 Ga0207681_10017229 Ga0207681_100172294 445
90 3300039437 Ga0436365_0986987 Ga0436365_0986987_949_2367 445
91 3300039453 Ga0436362_1293681 Ga0436362_1293681_464_1882 445
92 3300044656 Ga0466969_0030909 Ga0466969_0030909_939_2360 445
93 3300044693 Ga0466961_0004576 Ga0466961_0004576_3149_4570 445
94 3300047317 Ga0495604_0003567 Ga0495604_0003567_10519_11940 445
95 3300047321 Ga0495676_0044071 Ga0495676_0044071_756_2180 445
96 3300050508 nmdc:mga09592_63287_c1 nmdc:mga09592_63287_c1_934_2361 445
97 3300005337 Ga0070682_100012420 Ga0070682_1000124202 446
98 3300005338 Ga0068868_100048714 Ga0068868_1000487142 446
99 3300005340 Ga0070689_100035922 Ga0070689_1000359222 446
100 3300005345 Ga0070692_10014044 Ga0070692_100140444 446
101 3300005366 Ga0070659_100000051 Ga0070659_10000005164 446
102 3300005435 Ga0070714_100000208 Ga0070714_10000020847 446
103 3300005435 Ga0070714_100001061 Ga0070714_10000106111 446
104 3300005435 Ga0070714_100011341 Ga0070714_1000113413 446
105 3300005435 Ga0070714_100125522 Ga0070714_1001255222 446
106 3300005436 Ga0070713_100029854 Ga0070713_1000298542 446
107 3300005436 Ga0070713_100086395 Ga0070713_1000863952 446
108 3300005437 Ga0070710_10000013 Ga0070710_1000001390 446
109 3300005437 Ga0070710_10036506 Ga0070710_100365062 446
110 3300005439 Ga0070711_100014361 Ga0070711_1000143612 446
111 3300005459 Ga0068867_100094657 Ga0068867_1000946572 446
112 3300005544 Ga0070686_100095912 Ga0070686_1000959122 446
113 3300005615 Ga0070702_100077393 Ga0070702_1000773932 446
114 3300005840 Ga0068870_10031197 Ga0068870_100311972 446
115 3300005842 Ga0068858_100080680 Ga0068858_1000806802 446
116 3300005983 Ga0081540_1000392 Ga0081540_100039222 446
117 3300005985 Ga0081539_10033312 Ga0081539_100333123 446
118 3300006028 Ga0070717_10000028 Ga0070717_1000002826 446
119 3300006028 Ga0070717_10014287 Ga0070717_100142872 446
120 3300006028 Ga0070717_10144219 Ga0070717_101442192 446
121 3300006173 Ga0070716_100059376 Ga0070716_1000593762 446
122 3300006175 Ga0070712_100000005 Ga0070712_100000005131 446
123 3300006175 Ga0070712_100067462 Ga0070712_1000674622 446
124 3300009098 Ga0105245_10052408 Ga0105245_100524081 446
125 3300009098 Ga0105245_10062323 Ga0105245_100623232 446
126 3300009148 Ga0105243_10030400 Ga0105243_100304003 446
127 3300009148 Ga0105243_10036206 Ga0105243_100362062 446
128 3300009553 Ga0105249_10174289 Ga0105249_101742891 446
129 3300010375 Ga0105239_10107546 Ga0105239_101075462 446
130 3300021377 Ga0213874_10000113 Ga0213874_100001135 446
131 3300021377 Ga0213874_10003463 Ga0213874_100034632 446
132 3300021377 Ga0213874_10015077 Ga0213874_100150772 446
133 3300021384 Ga0213876_10002193 Ga0213876_100021934 446
134 3300021384 Ga0213876_10020804 Ga0213876_100208042 446
135 3300021388 Ga0213875_10000272 Ga0213875_1000027233 446
136 3300021388 Ga0213875_10030197 Ga0213875_100301972 446
137 3300025898 Ga0207692_10000003 Ga0207692_1000000389 446
138 3300025901 Ga0207688_10041726 Ga0207688_100417262 446
139 3300025907 Ga0207645_10123372 Ga0207645_101233722 446
140 3300025908 Ga0207643_10019833 Ga0207643_100198332 446
141 3300025915 Ga0207693_10000023 Ga0207693_1000002343 446
142 3300025915 Ga0207693_10000659 Ga0207693_1000065927 446
143 3300025919 Ga0207657_10036405 Ga0207657_100364055 446
144 3300025927 Ga0207687_10016986 Ga0207687_100169864 446
145 3300025928 Ga0207700_10021624 Ga0207700_100216244 446
146 3300025928 Ga0207700_10053448 Ga0207700_100534481 446
147 3300025928 Ga0207700_10077625 Ga0207700_100776252 446
148 3300025929 Ga0207664_10000174 Ga0207664_1000017449 446
149 3300025929 Ga0207664_10000931 Ga0207664_1000093116 446
150 3300025931 Ga0207644_10028003 Ga0207644_100280034 446
151 3300025932 Ga0207690_10000054 Ga0207690_1000005485 446
152 3300025932 Ga0207690_10033195 Ga0207690_100331952 446
153 3300025935 Ga0207709_10063999 Ga0207709_100639992 446
154 3300026023 Ga0207677_10034846 Ga0207677_100348462 446
155 3300026023 Ga0207677_10125180 Ga0207677_101251802 446
156 3300026067 Ga0207678_10042371 Ga0207678_100423712 446
157 3300026075 Ga0207708_10005998 Ga0207708_100059987 446
158 3300026089 Ga0207648_10015342 Ga0207648_100153422 446
159 3300026095 Ga0207676_10117441 Ga0207676_101174412 446
160 3300026118 Ga0207675_100061174 Ga0207675_1000611742 446
161 3300026142 Ga0207698_10095808 Ga0207698_100958081 446
162 3300028556 Ga0265337_1001131 Ga0265337_100113113 446
163 3300028558 Ga0265326_10000003 Ga0265326_10000003489 446
164 3300028558 Ga0265326_10000666 Ga0265326_1000066613 446
165 3300028563 Ga0265319_1000065 Ga0265319_100006524 446
166 3300028563 Ga0265319_1000614 Ga0265319_10006144 446
167 3300028573 Ga0265334_10000001 Ga0265334_1000000141 446
168 3300028577 Ga0265318_10000518 Ga0265318_100005182 446
169 3300028654 Ga0265322_10008491 Ga0265322_100084912 446
170 3300028666 Ga0265336_10000001 Ga0265336_10000001341 446
171 3300028666 Ga0265336_10003386 Ga0265336_100033864 446
172 3300028800 Ga0265338_10000004 Ga0265338_10000004541 446
173 3300028800 Ga0265338_10020952 Ga0265338_100209524 446
174 3300031247 Ga0265340_10000002 Ga0265340_10000002541 446
175 3300031249 Ga0265339_10009674 Ga0265339_100096744 446
176 3300031251 Ga0265327_10004804 Ga0265327_1000480410 446
177 3300035117 Ga0373953_0008115 Ga0373953_0008115_295_1716 446
178 3300036401 Ga0373937_0023309 Ga0373937_0023309_2978_4399 446
179 3300037853 Ga0436364_0067988 Ga0436364_0067988_758_2197 446
180 3300037853 Ga0436364_0542710 Ga0436364_0542710_1186_2607 446
181 3300037853 Ga0436364_0685870 Ga0436364_0685870_24765_26186 446
182 3300037853 Ga0436364_0917657 Ga0436364_0917657_7314_8735 446
183 3300037853 Ga0436364_1550107 Ga0436364_1550107_176_1597 446
184 3300039437 Ga0436365_0794906 Ga0436365_0794906_1158_2579 446
185 3300039437 Ga0436365_1242127 Ga0436365_1242127_9260_10681 446
186 3300039437 Ga0436365_1301841 Ga0436365_1301841_2622_4043 446
187 3300039437 Ga0436365_1388320 Ga0436365_1388320_351_1772 446
188 3300039437 Ga0436365_1579179 Ga0436365_1579179_802_2223 446
189 3300039437 Ga0436365_1908882 Ga0436365_1908882_1324_2745 446
190 3300039450 Ga0436363_0275177 Ga0436363_0275177_79265_80686 446
191 3300039450 Ga0436363_0702426 Ga0436363_0702426_2775_4196 446
192 3300039450 Ga0436363_1347247 Ga0436363_1347247_600_2021 446
193 3300039450 Ga0436363_1512873 Ga0436363_1512873_717_2138 446
194 3300039453 Ga0436362_0026443 Ga0436362_0026443_396_1817 446
195 3300044656 Ga0466969_0021133 Ga0466969_0021133_710_2131 446
196 3300044656 Ga0466969_0034577 Ga0466969_0034577_123_1550 446
197 3300044693 Ga0466961_0012308 Ga0466961_0012308_1746_3170 446
198 3300044694 Ga0466963_0001879 Ga0466963_0001879_3126_4547 446
199 3300044694 Ga0466963_0004355 Ga0466963_0004355_1160_2587 446
200 3300044694 Ga0466963_0009481 Ga0466963_0009481_1717_3138 446
201 3300044706 Ga0466964_0005604 Ga0466964_0005604_951_2372 446
202 3300044706 Ga0466964_0053422 Ga0466964_0053422_23_1444 446
203 3300044719 Ga0466971_0037294 Ga0466971_0037294_550_1974 446
204 3300044842 Ga0466957_0010672 Ga0466957_0010672_2951_4372 446
205 3300045049 Ga0466959_0002586 Ga0466959_0002586_235_1656 446
206 3300045049 Ga0466959_0011503 Ga0466959_0011503_4912_6333 446
207 3300045836 Ga0466958_0004486 Ga0466958_0004486_2799_4223 446
208 3300045836 Ga0466958_0008632 Ga0466958_0008632_1592_3013 446
209 3300045836 Ga0466958_0025430 Ga0466958_0025430_751_2187 446
210 3300045836 Ga0466958_0029937 Ga0466958_0029937_235_1665 446
211 3300045836 Ga0466958_0035710 Ga0466958_0035710_663_2093 446
212 3300045836 Ga0466958_0042163 Ga0466958_0042163_510_1931 446
213 3300045836 Ga0466958_0052459 Ga0466958_0052459_156_1577 446
214 3300045976 Ga0466967_0001214 Ga0466967_0001214_11432_12859 446
215 3300045976 Ga0466967_0134520 Ga0466967_0134520_862_2283 446
216 3300046462 Ga0495651_0012367 Ga0495651_0012367_782_2203 446
217 3300046463 Ga0495653_0014290 Ga0495653_0014290_831_2252 446
218 3300046463 Ga0495653_0069641 Ga0495653_0069641_414_1835 446
219 3300046477 Ga0495664_0000073 Ga0495664_0000073_35378_36805 446
220 3300046511 Ga0495608_0025060 Ga0495608_0025060_2389_3810 446
221 3300046514 Ga0495618_0013772 Ga0495618_0013772_1721_3142 446
222 3300046529 Ga0495652_0039819 Ga0495652_0039819_1474_2904 446
223 3300046529 Ga0495652_0080457 Ga0495652_0080457_1209_2630 446
224 3300046536 Ga0495587_0088230 Ga0495587_0088230_247_1668 446
225 3300046559 Ga0495667_0030182 Ga0495667_0030182_149_1570 446
226 3300046663 Ga0495635_0007025 Ga0495635_0007025_5395_6816 446
227 3300046675 Ga0495657_0055079 Ga0495657_0055079_1030_2451 446
228 3300046680 Ga0495646_0044788 Ga0495646_0044788_456_1877 446
229 3300046809 Ga0495600_0040686 Ga0495600_0040686_1452_2873 446
230 3300047319 Ga0495674_0011584 Ga0495674_0011584_4929_6350 446
231 3300047319 Ga0495674_0138035 Ga0495674_0138035_132_1562 446
232 3300047322 Ga0495680_0015185 Ga0495680_0015185_3602_5023 446
233 3300047444 Ga0495675_0063985 Ga0495675_0063985_828_2294 446
234 3300048088 Ga0495602_0014363 Ga0495602_0014363_991_2412 446
235 3300048903 Ga0496100_0003999 Ga0496100_0003999_2724_4154 446
236 3300048903 Ga0496100_0028251 Ga0496100_0028251_806_2227 446
237 3300048904 Ga0496101_0002079 Ga0496101_0002079_2491_3912 446
238 3300048905 Ga0496102_0000040 Ga0496102_0000040_14679_16106 446
239 3300048905 Ga0496102_0015931 Ga0496102_0015931_4187_5608 446
240 3300048906 Ga0496103_0000294 Ga0496103_0000294_14695_16122 446
241 3300048907 Ga0496104_0000006 Ga0496104_0000006_391542_392966 446
242 3300048907 Ga0496104_0015646 Ga0496104_0015646_2367_3788 446
243 3300048907 Ga0496104_0249501 Ga0496104_0249501_146_1576 446
244 3300048909 Ga0496106_0004063 Ga0496106_0004063_825_2246 446
245 3300048910 Ga0496107_0116546 Ga0496107_0116546_82_1533 446
246 3300048912 Ga0496109_0010016 Ga0496109_0010016_2765_4201 446
247 3300048912 Ga0496109_0153376 Ga0496109_0153376_592_2043 446
248 3300048912 Ga0496109_0192795 Ga0496109_0192795_227_1648 446
249 3300048913 Ga0496110_0000044 Ga0496110_0000044_27014_28438 446
250 3300048913 Ga0496110_0051462 Ga0496110_0051462_327_1778 446
251 3300048914 Ga0496111_0000304 Ga0496111_0000304_16446_17870 446
252 3300048915 Ga0496112_0002594 Ga0496112_0002594_9208_10647 446
253 3300048915 Ga0496112_0004482 Ga0496112_0004482_900_2321 446
254 3300048915 Ga0496112_0128803 Ga0496112_0128803_43_1464 446
255 3300048916 Ga0496113_0045474 Ga0496113_0045474_1265_2716 446
256 3300048918 Ga0496115_0000059 Ga0496115_0000059_24422_25852 446
257 3300048918 Ga0496115_0016746 Ga0496115_0016746_318_1739 446
258 3300048924 Ga0496121_0003922 Ga0496121_0003922_8005_9426 446
259 3300048927 Ga0496124_0034827 Ga0496124_0034827_2935_4383 446
260 3300053077 Ga0495601_0016278 Ga0495601_0016278_2427_3851 446
261 3300061719 Ga0466962_0002728 Ga0466962_0002728_155_1579 446
262 3300061719 Ga0466962_0032902 Ga0466962_0032902_556_1977 446
263 3300061719 Ga0466962_0038490 Ga0466962_0038490_315_1745 446
264 3300005329 Ga0070683_100010436 Ga0070683_1000104366 454
265 3300005329 Ga0070683_100066953 Ga0070683_1000669532 454
266 3300005344 Ga0070661_100012741 Ga0070661_1000127413 454
267 3300005366 Ga0070659_100016996 Ga0070659_1000169965 454
268 3300005458 Ga0070681_10006339 Ga0070681_1000633913 454
269 3300005530 Ga0070679_100003242 Ga0070679_10000324217 454
270 3300005530 Ga0070679_100027608 Ga0070679_1000276083 454
271 3300005535 Ga0070684_100008279 Ga0070684_1000082795 454
272 3300005564 Ga0070664_100056690 Ga0070664_1000566902 454
273 3300005614 Ga0068856_100020639 Ga0068856_1000206392 454
274 3300005616 Ga0068852_100004152 Ga0068852_1000041522 454
275 3300009093 Ga0105240_10240157 Ga0105240_102401572 454
276 3300009551 Ga0105238_10036101 Ga0105238_100361016 454
277 3300013104 Ga0157370_10018405 Ga0157370_100184056 454
278 3300025912 Ga0207707_10051701 Ga0207707_100517012 454
279 3300025919 Ga0207657_10028542 Ga0207657_100285422 454
280 3300025920 Ga0207649_10049274 Ga0207649_100492743 454
281 3300025921 Ga0207652_10028130 Ga0207652_100281303 454
282 3300025921 Ga0207652_10232866 Ga0207652_102328662 454
283 3300025924 Ga0207694_10028161 Ga0207694_100281614 454
284 3300025944 Ga0207661_10000300 Ga0207661_1000030029 454
285 3300025944 Ga0207661_10001998 Ga0207661_1000199817 454
286 3300026116 Ga0207674_10055500 Ga0207674_100555002 454

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03880

DbpA

DbpA RNA binding domain

402

473

0.97

PF00270

DEAD

DEAD/DEAH box helicase

29

195

0.95

PF00271

Helicase_C

Helicase conserved C-terminal domain

229

338

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gju-assembly1.cif.gz_A dead-box rna helicase 0.9767 2 205
5gju-assembly1.cif.gz_A dead-box rna helicase 0.9719 2 205
4kbg-assembly1.cif.gz_A almost closed conformation of the helicase core of the rna helicase hera 0.9679 2 206
7ddx-assembly1.cif.gz_B crystal structure of kank1 s1179f mutant in complex wtih eif4a1 0.9662 1 205
7dtk-assembly1.cif.gz_A crystal structure of the reca1 domain of rna helicase cgh-1 in c. elegans 0.9661 2 202
ID Description Score Start End Superfamily
af_O05855_2_234_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9775 1 204 3.40.50.300
5gjuA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9767 2 205 3.40.50.300
5gjuA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9719 2 205 3.40.50.300
af_Q2FY15_2_213_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9708 4 207 3.40.50.300
af_Q09719_34_275_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9705 4 206 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A0P8LZI6-F1-model_v4 deleted 0.991 2 205
AF-W1YIB8-F1-model_v4 DEAD-box ATP-dependent RNA helicase CshA 0.9782 62 170 GO:0003676
GO:0003724
GO:0005524
GO:0005829
AF-A0A3M2SSX0-F1-model_v4 RNA helicase (EC 3.6.4.13) 0.9668 3 158 GO:0003676
GO:0003724
GO:0005524
GO:0005829
GO:0016787
AF-A0A2D4JH24-F1-model_v4 RNA helicase (EC 3.6.4.13) 0.9664 2 130 GO:0003676
GO:0003724
GO:0005524
GO:0016787
AF-A0A075FQ27-F1-model_v4 RNA helicase (EC 3.6.4.13) 0.9634 1 120 GO:0003724
GO:0005524
GO:0005829
GO:0005840
GO:0009409
GO:0016787
GO:0033592
GO:0071103
GO:0140097

Feature Viewer

pLDDT pTM Quality
78.87 0.5 Medium
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Predicted Structure (AlphaFold2)

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