F387707

General Info

Members Datasets Scaffolds Average Seq Length
286 241 573 316

Family's Representative Sequence

Representative Sequence 3300053121|Ga0500607_001536|Ga0500607_001536_8385_9509
Length 374
Sequence MATSSISKPKASLAIIDDYFNTSAPHFGLIPPSELQIITFNDTIVPVNEVEDARLVERLQPFDMISTIRERTAFPGSLLRRLPNLKLLLATGTQFERFDLATAKELGITVVAAPGLGRTDQGGVQRPSIKKGNVHPTTQHTWALLLALARNVAVDDAAIKTGTGWQSGLATSLPTQTLGIVGLGRLGAAVARVAHLWWGMKVMCWSENLTQQKADQMAVAMGLPFENAESPGEKTFQAVSKEELFRNADVVSMHYVLSDRSRSIVGRRELELMKKSAFLVNTSRGPLIDQDALVDALEKGQIRGAALDVFEIEPLPSDSPWRRSNYWGRDGRSAVLTTPHMGYVDEGLMNTWYAESAENVERWLRGQDVLRRLA

Samples

Sample ID Description Type Environment
1 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
9 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
77 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
78 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
79 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
80 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
81 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
120 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
121 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
122 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
123 3300031828 Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Unclassified
124 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
125 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
126 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
127 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
128 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
129 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
130 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
131 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
132 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
133 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
134 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
135 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
136 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
137 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
138 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
139 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
140 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
141 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
142 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
143 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
144 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
145 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
146 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
147 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
148 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
149 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
150 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
151 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
152 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
153 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
154 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
155 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
156 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
157 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
158 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
159 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
160 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
161 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
162 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
163 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
164 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
165 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
166 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
167 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
168 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
169 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
170 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
171 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
172 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
173 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
174 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
175 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
176 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
177 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
178 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
179 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
180 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
181 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
182 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
183 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
184 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
185 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
186 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
187 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
188 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
189 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
190 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
191 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
192 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
193 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
194 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
195 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
196 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
197 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
198 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
199 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
200 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
201 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
202 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
205 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
207 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
208 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
209 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
210 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
211 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
212 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
213 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
214 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
215 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
216 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
217 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
218 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
219 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
220 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
221 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
222 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
223 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
224 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
225 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
226 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
227 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
228 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
229 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
230 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
231 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
232 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
233 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
234 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
235 2738541283 Pedobacter sp. OK701 Isolate Unclassified
236 2738541284 Pedobacter sp. YR016 Isolate Unclassified
237 2738543023 Pedobacter sp. OK628 Isolate Unclassified
238 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
239 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
240 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
241 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.5
Metatranscriptomes 0.7
Isolates 2.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.55
Nodule 0.35
Rhizoplane 4.55
Rhizosphere 84.62
Stem 0
Stem Tuber 0
Unclassified 1.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500607_001536 3300053121 Eukaryota 20542
2 SwRhRL2b_contig_116274 2162886007 Bacteria 23863
3 JGI25162J39368_1000688 3300002737 Bacteria 23552
4 JGI25164J39214_1001281 3300002772 Bacteria 6443
5 JGI25165J46597_1000846 3300003214 Bacteria 22324
6 rootH2_10025281 3300003320 Bacteria 3095
7 rootH1_10001276 3300003316 Bacteria 3262
8 rootH1_10001276 3300003323 Bacteria 38627
9 JGI25404J52841_10000659 3300003659 Bacteria 5260
10 Ga0065714_10064455 3300005288 Bacteria 72722
11 Ga0065714_10071478 3300005288 Bacteria 3563
12 Ga0065704_10000193 3300005289 Bacteria 203271
13 Ga0065715_10032744 3300005293 Bacteria 1299
14 Ga0070658_10000677 3300005327 Bacteria 29445
15 Ga0070658_10029994 3300005327 Bacteria 4370
16 Ga0070658_10284729 3300005327 Bacteria 1407
17 Ga0068869_100139229 3300005334 Bacteria 1872
18 Ga0070680_100034941 3300005336 Bacteria 4055
19 Ga0070689_100337547 3300005340 Bacteria 1262
20 Ga0070691_10084470 3300005341 Bacteria 1558
21 Ga0070661_100088523 3300005344 Bacteria 2292
22 Ga0070668_100011266 3300005347 Bacteria 6658
23 Ga0070669_100147597 3300005353 Bacteria 1818
24 Ga0070669_100378539 3300005353 Bacteria 1154
25 Ga0070671_100124432 3300005355 Bacteria 2170
26 Ga0070659_100026372 3300005366 Bacteria 4471
27 Ga0070667_100009466 3300005367 Bacteria 8081
28 Ga0070709_10012049 3300005434 Bacteria 4834
29 Ga0070714_100014154 3300005435 Bacteria 6405
30 Ga0070713_100013382 3300005436 Bacteria 6056
31 Ga0070713_100138634 3300005436 Bacteria 2152
32 Ga0070710_10000417 3300005437 Bacteria 19992
33 Ga0070710_10060199 3300005437 Bacteria 2159
34 Ga0070711_100003647 3300005439 Bacteria 8999
35 Ga0070705_100002509 3300005440 Bacteria 9223
36 Ga0070705_100089076 3300005440 Bacteria 1917
37 Ga0070708_100003129 3300005445 Bacteria 12883
38 Ga0070685_10079376 3300005466 Bacteria 1964
39 Ga0070706_100068265 3300005467 Bacteria 3287
40 Ga0070706_100336954 3300005467 Bacteria 1406
41 Ga0070707_100017995 3300005468 Bacteria 6647
42 Ga0070699_100006901 3300005518 Bacteria 9874
43 Ga0070684_100020641 3300005535 Bacteria 5464
44 Ga0070697_100011518 3300005536 Bacteria 6913
45 Ga0068853_100307647 3300005539 Bacteria 1466
46 Ga0070672_100049228 3300005543 Bacteria 3277
47 Ga0070665_100062325 3300005548 Bacteria 3739
48 Ga0070665_100130639 3300005548 Bacteria 2514
49 Ga0068855_100018734 3300005563 Bacteria 8323
50 Ga0068855_100088478 3300005563 Bacteria 3577
51 Ga0068857_100025516 3300005577 Bacteria 5203
52 Ga0070702_100021644 3300005615 Bacteria 3387
53 Ga0068864_100063128 3300005618 Bacteria 3210
54 Ga0068870_10038922 3300005840 Bacteria 2458
55 Ga0068863_100014919 3300005841 Bacteria 7462
56 Ga0068863_100063912 3300005841 Bacteria 3481
57 Ga0068863_100080496 3300005841 Bacteria 3085
58 Ga0068863_100156550 3300005841 Bacteria 2182
59 Ga0068858_100129199 3300005842 Bacteria 2368
60 Ga0068860_100003306 3300005843 Bacteria 16588
61 Ga0068860_100162308 3300005843 Bacteria 2155
62 Ga0068860_100212357 3300005843 Bacteria 1877
63 Ga0068862_100000366 3300005844 Bacteria 49032
64 Ga0081540_1000769 3300005983 Bacteria 29441
65 Ga0070715_10092822 3300006163 Bacteria 1392
66 Ga0070716_100008527 3300006173 Bacteria 5090
67 Ga0097621_100067752 3300006237 Bacteria 2942
68 Ga0068871_100152940 3300006358 Bacteria 1968
69 Ga0075434_100044764 3300006871 Bacteria 4389
70 Ga0075436_100025181 3300006914 Bacteria 4092
71 Ga0075436_100128822 3300006914 Bacteria 1774
72 Ga0075435_100006328 3300007076 Bacteria 8362
73 Ga0111539_10097737 3300009094 Bacteria 3449
74 Ga0111539_10342534 3300009094 Bacteria 1740
75 Ga0105245_10012688 3300009098 Bacteria 7337
76 Ga0114129_10579458 3300009147 Bacteria 1456
77 Ga0105241_10036591 3300009174 Bacteria 3695
78 Ga0105242_10098412 3300009176 Bacteria 2474
79 Ga0105248_10021087 3300009177 Bacteria 7220
80 Ga0105249_10000916 3300009553 Bacteria 26081
81 Ga0105249_10024803 3300009553 Bacteria 5393
82 Ga0099796_10004727 3300010159 Bacteria 3327
83 Ga0105246_10023873 3300011119 Bacteria 3963
84 Ga0157373_10000136 3300013100 Bacteria 57912
85 Ga0157371_10087631 3300013102 Unclassified 2204
86 Ga0157370_10000875 3300013104 Bacteria 38190
87 Ga0157370_10019912 3300013104 Bacteria 6713
88 Ga0157370_10074992 3300013104 Bacteria 3190
89 Ga0157378_10438495 3300013297 Bacteria 1294
90 Ga0163162_10051041 3300013306 Bacteria 4149
91 Ga0157380_10201702 3300014326 Bacteria 1765
92 Ga0182008_10000171 3300014497 Bacteria 50744
93 Ga0157377_10018205 3300014745 Bacteria 3649
94 Ga0157379_10236204 3300014968 Bacteria 1657
95 Ga0163161_10057259 3300017792 Bacteria 2832
96 Ga0206353_10432510 3300020082 Bacteria 1983
97 Ga0213872_10077076 3300021361 Bacteria 1499
98 Ga0213876_10006363 3300021384 Bacteria 6434
99 Ga0207427_100138 3300025231 Bacteria 86499
100 Ga0209437_100010 3300025233 Bacteria 838447
101 Ga0209233_1000017 3300025261 Bacteria 898076
102 Ga0207653_10010504 3300025885 Bacteria 2887
103 Ga0207692_10001729 3300025898 Bacteria 8268
104 Ga0207710_10022874 3300025900 Bacteria 2683
105 Ga0207699_10009373 3300025906 Bacteria 4872
106 Ga0207699_10090978 3300025906 Bacteria 1915
107 Ga0207645_10130744 3300025907 Bacteria 1634
108 Ga0207705_10004269 3300025909 Bacteria 10824
109 Ga0207705_10038597 3300025909 Bacteria 3420
110 Ga0207705_10239360 3300025909 Bacteria 1382
111 Ga0207654_10050969 3300025911 Bacteria 2381
112 Ga0207671_10044787 3300025914 Bacteria 3272
113 Ga0207663_10010898 3300025916 Bacteria 4856
114 Ga0207660_10028736 3300025917 Bacteria 3806
115 Ga0207662_10009799 3300025918 Bacteria 5285
116 Ga0207657_10030359 3300025919 Bacteria 4906
117 Ga0207681_10252341 3300025923 Bacteria 1378
118 Ga0207700_10000849 3300025928 Bacteria 17621
119 Ga0207700_10013042 3300025928 Bacteria 5391
120 Ga0207700_10212510 3300025928 Bacteria 1636
121 Ga0207664_10019934 3300025929 Bacteria 4964
122 Ga0207664_10075121 3300025929 Bacteria 2732
123 Ga0207706_10086555 3300025933 Bacteria 2755
124 Ga0207686_10023404 3300025934 Bacteria 3568
125 Ga0207665_10016110 3300025939 Bacteria 4908
126 Ga0207665_10036566 3300025939 Bacteria 3266
127 Ga0207691_10088290 3300025940 Bacteria 2781
128 Ga0207691_10388335 3300025940 Bacteria 1191
129 Ga0207711_10263001 3300025941 Bacteria 1586
130 Ga0207689_10037317 3300025942 Bacteria 4030
131 Ga0207667_10028193 3300025949 Bacteria 6100
132 Ga0207712_10000994 3300025961 Bacteria 20219
133 Ga0207668_10016942 3300025972 Bacteria 4559
134 Ga0207640_10105434 3300025981 Bacteria 1986
135 Ga0207658_10000465 3300025986 Bacteria 37863
136 Ga0207658_10422900 3300025986 Bacteria 1175
137 Ga0207703_10240329 3300026035 Bacteria 1628
138 Ga0207678_10012497 3300026067 Bacteria 7456
139 Ga0207708_10055954 3300026075 Bacteria 3008
140 Ga0207702_10212451 3300026078 Bacteria 1799
141 Ga0207641_10040976 3300026088 Bacteria 3880
142 Ga0207676_10087931 3300026095 Bacteria 2542
143 Ga0207674_10002239 3300026116 Bacteria 24497
144 Ga0207675_100049097 3300026118 Bacteria 3939
145 Ga0207683_10003591 3300026121 Bacteria 13521
146 Ga0268266_10286124 3300028379 Bacteria 1534
147 Ga0268265_10003823 3300028380 Bacteria 10667
148 Ga0268264_10000158 3300028381 Bacteria 153433
149 Ga0268264_10135459 3300028381 Bacteria 2189
150 Ga0265340_10010287 3300031247 Bacteria 5006
151 Ga0265340_10025180 3300031247 Bacteria 3016
152 Ga0265316_10193692 3300031344 Bacteria 1509
153 Ga0307509_10036138 3300031507 Bacteria 5413
154 Ga0307516_10107903 3300031730 Bacteria 2592
155 Ga0316043_110883 3300031828 Eukaryota 1223
156 Ga0307412_10000067 3300031911 Bacteria 115549
157 Ga0307414_10031124 3300032004 Bacteria 3495
158 Ga0373948_0013404 3300034817 Bacteria 1480
159 Ga0373958_0003562 3300034819 Bacteria 2255
160 Ga0373926_0001497 3300035083 Bacteria 7140
161 Ga0373934_0006335 3300035086 Bacteria 4387
162 Ga0373944_0000176 3300035089 Bacteria 13159
163 Ga0373951_0019209 3300035091 Bacteria 1557
164 Ga0373923_0006274 3300035111 Bacteria 4097
165 Ga0373923_0032361 3300035111 Bacteria 2112
166 Ga0373945_0000329 3300035116 Bacteria 13481
167 Ga0373953_0023383 3300035117 Bacteria 2338
168 Ga0373956_0041423 3300035119 Bacteria 2044
169 Ga0373957_0003055 3300035120 Bacteria 4875
170 Ga0373960_0023807 3300035121 Bacteria 1651
171 Ga0373943_0022652 3300035170 Bacteria 2913
172 Ga0373946_0000964 3300035171 Bacteria 9865
173 Ga0373955_0013085 3300035172 Bacteria 4001
174 Ga0373962_0016613 3300035242 Bacteria 1900
175 Ga0373924_0003896 3300035410 Bacteria 5174
176 Ga0373927_0015440 3300035695 Bacteria 5045
177 Ga0373933_0125597 3300035724 Bacteria 1609
178 Ga0373947_0071103 3300035725 Bacteria 2133
179 Ga0436365_0505872 3300039437 Bacteria 9827
180 Ga0436361_0320757 3300039447 Bacteria 82248
181 Ga0436361_0598089 3300039447 Bacteria 1631
182 Ga0436361_0628366 3300039447 Bacteria 5420
183 Ga0436363_0171126 3300039450 Bacteria 1999
184 Ga0436362_0948098 3300039453 Bacteria 2238
185 Ga0439459_0038490 3300042438 Bacteria 1006
186 Ga0466965_0143846 3300044683 Bacteria 1243
187 Ga0466963_0141943 3300044694 Bacteria 1664
188 Ga0495592_0013911 3300046454 Bacteria 6113
189 Ga0495592_0154879 3300046454 Bacteria 1582
190 Ga0495629_0008289 3300046459 Bacteria 7638
191 Ga0495641_0006946 3300046461 Bacteria 7213
192 Ga0495651_0007677 3300046462 Bacteria 8246
193 Ga0495580_0030623 3300046472 Bacteria 3894
194 Ga0495639_0079647 3300046475 Bacteria 1524
195 Ga0495662_0012672 3300046476 Bacteria 4112
196 Ga0495606_0011553 3300046507 Bacteria 7188
197 Ga0495606_0127411 3300046507 Bacteria 1517
198 Ga0495608_0060598 3300046511 Bacteria 2489
199 Ga0495630_0011601 3300046517 Bacteria 6384
200 Ga0495648_0001975 3300046524 Bacteria 19477
201 Ga0495666_0013335 3300046526 Bacteria 4098
202 Ga0495665_0007733 3300046531 Bacteria 5815
203 Ga0495640_0012409 3300046533 Bacteria 6508
204 Ga0495587_0002315 3300046536 Bacteria 12736
205 Ga0495622_0034718 3300046557 Bacteria 2353
206 Ga0495668_0000073 3300046616 Bacteria 166105
207 Ga0495634_0076883 3300046642 Bacteria 2190
208 Ga0495635_0015560 3300046663 Bacteria 5316
209 Ga0495657_0041890 3300046675 Bacteria 3130
210 Ga0495599_0012826 3300046678 Bacteria 5172
211 Ga0495599_0219002 3300046678 Bacteria 1165
212 Ga0495623_0033440 3300046679 Bacteria 3299
213 Ga0495658_0021193 3300046683 Bacteria 3424
214 Ga0495613_0002132 3300046689 Bacteria 15002
215 Ga0495600_0002331 3300046809 Bacteria 10827
216 Ga0495581_0003416 3300047315 Bacteria 9116
217 Ga0495674_0090332 3300047319 Bacteria 2617
218 Ga0495680_0032939 3300047322 Bacteria 4200
219 Ga0495675_0048333 3300047444 Bacteria 2707
220 Ga0495684_0015722 3300047471 Bacteria 5823
221 Ga0495686_0000138 3300047472 Bacteria 146224
222 Ga0495686_0049470 3300047472 Unclassified 2645
223 Ga0495593_0002789 3300047673 Bacteria 10525
224 Ga0496100_0039635 3300048903 Bacteria 2992
225 Ga0496101_0147139 3300048904 Bacteria 1799
226 Ga0496102_0013534 3300048905 Bacteria 7069
227 Ga0496102_0041354 3300048905 Bacteria 4173
228 Ga0496103_0014529 3300048906 Bacteria 4674
229 Ga0496105_0054393 3300048908 Bacteria 3304
230 Ga0496106_0043586 3300048909 Bacteria 3366
231 Ga0496108_0028154 3300048911 Bacteria 4648
232 Ga0496110_0053597 3300048913 Bacteria 3546
233 Ga0496111_0053131 3300048914 Bacteria 2926
234 Ga0496113_0206485 3300048916 Bacteria 1562
235 Ga0496114_0028797 3300048917 Bacteria 4561
236 Ga0496115_0048719 3300048918 Bacteria 3389
237 Ga0496116_0000014 3300048919 Bacteria 569049
238 Ga0496120_0004228 3300048923 Bacteria 12249
239 Ga0496121_0005519 3300048924 Bacteria 16160
240 Ga0496121_0093748 3300048924 Bacteria 2337
241 Ga0496122_0008110 3300048925 Bacteria 11448
242 Ga0496126_0000688 3300048929 Bacteria 61933
243 Ga0501031_0000212 3300049568 Bacteria 33227
244 Ga0501032_0002370 3300049569 Bacteria 14726
245 Ga0501033_0002303 3300049570 Bacteria 16291
246 Ga0501036_0000125 3300049572 Bacteria 48737
247 Ga0501037_0001089 3300049573 Bacteria 20141
248 Ga0501038_0000169 3300049574 Bacteria 55445
249 Ga0501039_0000935 3300049575 Bacteria 21312
250 Ga0501040_0080105 3300049576 Bacteria 2262
251 Ga0501043_0000974 3300049579 Bacteria 25308
252 Ga0501043_0297128 3300049579 Bacteria 1235
253 Ga0501047_0000989 3300049581 Bacteria 28671
254 Ga0501048_0001271 3300049582 Bacteria 19112
255 Ga0501069_0009287 3300049585 Bacteria 5190
256 Ga0501070_0001235 3300049586 Bacteria 22901
257 Ga0501070_0031623 3300049586 Bacteria 4434
258 Ga0501071_0103032 3300049587 Bacteria 2105
259 Ga0501074_0000109 3300049590 Bacteria 40793
260 Ga0501080_0000184 3300049742 Bacteria 45504
261 Ga0501035_0019782 3300049822 Bacteria 6185
262 Ga0501044_0001206 3300049823 Bacteria 30687
263 nmdc:mga0n895_35797_c1 3300050512 Bacteria 4790
264 nmdc:mga0rr50_15484_c1 3300050513 Bacteria 5036
265 nmdc:mga0rr50_182533_c1 3300050513 Bacteria 1716
266 nmdc:mga08x19_55324_c1 3300050514 Bacteria 2557
267 Ga0495601_0088636 3300053077 Bacteria 1989
268 Ga0495595_0059172 3300053084 Bacteria 1791
269 Ga0495619_0015484 3300053085 Bacteria 4824
270 Ga0495619_0044253 3300053085 Bacteria 2922
271 Ga0500578_0011521 3300053086 Bacteria 5714
272 Ga0500651_0000218 3300053093 Bacteria 35905
273 Ga0500572_000572 3300053111 Bacteria 12542
274 Ga0500559_0088747 3300053136 Bacteria 1413
275 Ga0500636_0018751 3300053177 Bacteria 4091
276 Ga0500596_000913 3300053735 Bacteria 5904
277 Ga0501084_0060952 3300054114 Bacteria 3158
278 Ga0501082_0007244 3300060353 Bacteria 9567
279 Ga0501082_0386080 3300060353 Unclassified 1222
280 2676473332 2675903058 Bacteria 6822861
281 2738754120 2738541283 Bacteria 7222293
282 2738761025 2738541284 Bacteria 5199923
283 2739300177 2738543023 Bacteria 6767879
284 2791911978 2791354901 Bacteria 8322202
285 2827628567 2827628540 Bacteria 6858585
286 2883580763 2883577096 Bacteria 4709178
287 2935883181 2935883170 Bacteria 7964738
288 Ga0500607_001536
289 SwRhRL2b_contig_116274
290 JGI25162J39368_1000688
291 JGI25164J39214_1001281
292 JGI25165J46597_1000846
293 rootH2_10025281
294 rootH1_10001276
295 JGI25404J52841_10000659
296 Ga0065714_10064455
297 Ga0065714_10071478
298 Ga0065704_10000193
299 Ga0065715_10032744
300 Ga0070658_10000677
301 Ga0070658_10029994
302 Ga0070658_10284729
303 Ga0068869_100139229
304 Ga0070680_100034941
305 Ga0070689_100337547
306 Ga0070691_10084470
307 Ga0070661_100088523
308 Ga0070668_100011266
309 Ga0070669_100147597
310 Ga0070669_100378539
311 Ga0070671_100124432
312 Ga0070659_100026372
313 Ga0070667_100009466
314 Ga0070709_10012049
315 Ga0070714_100014154
316 Ga0070713_100013382
317 Ga0070713_100138634
318 Ga0070710_10000417
319 Ga0070710_10060199
320 Ga0070711_100003647
321 Ga0070705_100002509
322 Ga0070705_100089076
323 Ga0070708_100003129
324 Ga0070685_10079376
325 Ga0070706_100068265
326 Ga0070706_100336954
327 Ga0070707_100017995
328 Ga0070699_100006901
329 Ga0070684_100020641
330 Ga0070697_100011518
331 Ga0068853_100307647
332 Ga0070672_100049228
333 Ga0070665_100062325
334 Ga0070665_100130639
335 Ga0068855_100018734
336 Ga0068855_100088478
337 Ga0068857_100025516
338 Ga0070702_100021644
339 Ga0068864_100063128
340 Ga0068870_10038922
341 Ga0068863_100014919
342 Ga0068863_100063912
343 Ga0068863_100080496
344 Ga0068863_100156550
345 Ga0068858_100129199
346 Ga0068860_100003306
347 Ga0068860_100162308
348 Ga0068860_100212357
349 Ga0068862_100000366
350 Ga0081540_1000769
351 Ga0070715_10092822
352 Ga0070716_100008527
353 Ga0097621_100067752
354 Ga0068871_100152940
355 Ga0075434_100044764
356 Ga0075436_100025181
357 Ga0075436_100128822
358 Ga0075435_100006328
359 Ga0111539_10097737
360 Ga0111539_10342534
361 Ga0105245_10012688
362 Ga0114129_10579458
363 Ga0105241_10036591
364 Ga0105242_10098412
365 Ga0105248_10021087
366 Ga0105249_10000916
367 Ga0105249_10024803
368 Ga0099796_10004727
369 Ga0105246_10023873
370 Ga0157373_10000136
371 Ga0157371_10087631
372 Ga0157370_10000875
373 Ga0157370_10019912
374 Ga0157370_10074992
375 Ga0157378_10438495
376 Ga0163162_10051041
377 Ga0157380_10201702
378 Ga0182008_10000171
379 Ga0157377_10018205
380 Ga0157379_10236204
381 Ga0163161_10057259
382 Ga0206353_10432510
383 Ga0213872_10077076
384 Ga0213876_10006363
385 Ga0207427_100138
386 Ga0209437_100010
387 Ga0209233_1000017
388 Ga0207653_10010504
389 Ga0207692_10001729
390 Ga0207710_10022874
391 Ga0207699_10009373
392 Ga0207699_10090978
393 Ga0207645_10130744
394 Ga0207705_10004269
395 Ga0207705_10038597
396 Ga0207705_10239360
397 Ga0207654_10050969
398 Ga0207671_10044787
399 Ga0207663_10010898
400 Ga0207660_10028736
401 Ga0207662_10009799
402 Ga0207657_10030359
403 Ga0207681_10252341
404 Ga0207700_10000849
405 Ga0207700_10013042
406 Ga0207700_10212510
407 Ga0207664_10019934
408 Ga0207664_10075121
409 Ga0207706_10086555
410 Ga0207686_10023404
411 Ga0207665_10016110
412 Ga0207665_10036566
413 Ga0207691_10088290
414 Ga0207691_10388335
415 Ga0207711_10263001
416 Ga0207689_10037317
417 Ga0207667_10028193
418 Ga0207712_10000994
419 Ga0207668_10016942
420 Ga0207640_10105434
421 Ga0207658_10000465
422 Ga0207658_10422900
423 Ga0207703_10240329
424 Ga0207678_10012497
425 Ga0207708_10055954
426 Ga0207702_10212451
427 Ga0207641_10040976
428 Ga0207676_10087931
429 Ga0207674_10002239
430 Ga0207675_100049097
431 Ga0207683_10003591
432 Ga0268266_10286124
433 Ga0268265_10003823
434 Ga0268264_10000158
435 Ga0268264_10135459
436 Ga0265340_10010287
437 Ga0265340_10025180
438 Ga0265316_10193692
439 Ga0307509_10036138
440 Ga0307516_10107903
441 Ga0316043_110883
442 Ga0307412_10000067
443 Ga0307414_10031124
444 Ga0373948_0013404
445 Ga0373958_0003562
446 Ga0373926_0001497
447 Ga0373934_0006335
448 Ga0373944_0000176
449 Ga0373951_0019209
450 Ga0373923_0006274
451 Ga0373923_0032361
452 Ga0373945_0000329
453 Ga0373953_0023383
454 Ga0373956_0041423
455 Ga0373957_0003055
456 Ga0373960_0023807
457 Ga0373943_0022652
458 Ga0373946_0000964
459 Ga0373955_0013085
460 Ga0373962_0016613
461 Ga0373924_0003896
462 Ga0373927_0015440
463 Ga0373933_0125597
464 Ga0373947_0071103
465 Ga0436365_0505872
466 Ga0436361_0320757
467 Ga0436361_0598089
468 Ga0436361_0628366
469 Ga0436363_0171126
470 Ga0436362_0948098
471 Ga0439459_0038490
472 Ga0466965_0143846
473 Ga0466963_0141943
474 Ga0495592_0013911
475 Ga0495592_0154879
476 Ga0495629_0008289
477 Ga0495641_0006946
478 Ga0495651_0007677
479 Ga0495580_0030623
480 Ga0495639_0079647
481 Ga0495662_0012672
482 Ga0495606_0011553
483 Ga0495606_0127411
484 Ga0495608_0060598
485 Ga0495630_0011601
486 Ga0495648_0001975
487 Ga0495666_0013335
488 Ga0495665_0007733
489 Ga0495640_0012409
490 Ga0495587_0002315
491 Ga0495622_0034718
492 Ga0495668_0000073
493 Ga0495634_0076883
494 Ga0495635_0015560
495 Ga0495657_0041890
496 Ga0495599_0012826
497 Ga0495599_0219002
498 Ga0495623_0033440
499 Ga0495658_0021193
500 Ga0495613_0002132
501 Ga0495600_0002331
502 Ga0495581_0003416
503 Ga0495674_0090332
504 Ga0495680_0032939
505 Ga0495675_0048333
506 Ga0495684_0015722
507 Ga0495686_0000138
508 Ga0495686_0049470
509 Ga0495593_0002789
510 Ga0496100_0039635
511 Ga0496101_0147139
512 Ga0496102_0013534
513 Ga0496102_0041354
514 Ga0496103_0014529
515 Ga0496105_0054393
516 Ga0496106_0043586
517 Ga0496108_0028154
518 Ga0496110_0053597
519 Ga0496111_0053131
520 Ga0496113_0206485
521 Ga0496114_0028797
522 Ga0496115_0048719
523 Ga0496116_0000014
524 Ga0496120_0004228
525 Ga0496121_0005519
526 Ga0496121_0093748
527 Ga0496122_0008110
528 Ga0496126_0000688
529 Ga0501031_0000212
530 Ga0501032_0002370
531 Ga0501033_0002303
532 Ga0501036_0000125
533 Ga0501037_0001089
534 Ga0501038_0000169
535 Ga0501039_0000935
536 Ga0501040_0080105
537 Ga0501043_0000974
538 Ga0501043_0297128
539 Ga0501047_0000989
540 Ga0501048_0001271
541 Ga0501069_0009287
542 Ga0501070_0001235
543 Ga0501070_0031623
544 Ga0501071_0103032
545 Ga0501074_0000109
546 Ga0501080_0000184
547 Ga0501035_0019782
548 Ga0501044_0001206
549 nmdc:mga0n895_35797_c1
550 nmdc:mga0rr50_15484_c1
551 nmdc:mga0rr50_182533_c1
552 nmdc:mga08x19_55324_c1
553 Ga0495601_0088636
554 Ga0495595_0059172
555 Ga0495619_0015484
556 Ga0495619_0044253
557 Ga0500578_0011521
558 Ga0500651_0000218
559 Ga0500572_000572
560 Ga0500559_0088747
561 Ga0500636_0018751
562 Ga0500596_000913
563 Ga0501084_0060952
564 Ga0501082_0007244
565 Ga0501082_0386080
566 2676473332
567 2738754120
568 2738761025
569 2739300177
570 2791911978
571 2827628567
572 2883580763
573 2935883181

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

142

342

0.88

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

26

374

0.65

Structural Annotation

Top 5 Hits

ID Description Score Start End
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9544 109 293
7cvp-assembly1.cif.gz_B the crystal structure of human phgdh from biortus. 0.9312 109 304
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9253 109 293
3gg9-assembly2.cif.gz_C crystal structure of putative d-3-phosphoglycerate dehydrogenase oxidoreductase from ralstonia solanacearum 0.9229 5 310
6rj6-assembly1.cif.gz_B crystal structure of phgdh in complex with bi-4924 0.9152 109 309
ID Description Score Start End Superfamily
af_Q4CQU6_365_588_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9632 147 175 3.50.50.60
af_F1QW85_122_309_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9504 110 286 3.40.50.720
af_Q2FZW9_11_72_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9504 43 103 3.40.50.720
4s1vD02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.95 108 291 3.40.50.720
af_O88712_64_123_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9466 53 102 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A1C3NYR9-F1-model_v4 Phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.9796 84 309 GO:0004617
GO:0051287
AF-A0A7X1U1R9-F1-model_v4 D-2-hydroxyacid dehydrogenase family protein 0.9762 113 310 GO:0016614
GO:0051287
AF-A0A6I1L6U1-F1-model_v4 Hydroxypyruvate reductase 0.9748 120 309 GO:0016616
GO:0051287
AF-A0A7Z0NH82-F1-model_v4 D-2-hydroxyacid dehydrogenase family protein 0.9737 6 310 GO:0016616
GO:0051287
AF-A0A519V3S1-F1-model_v4 D-2-hydroxyacid dehydrogenase family protein 0.9732 35 310 GO:0016616
GO:0051287

Map