F387771

General Info

Members Datasets Scaffolds Average Seq Length
287 195 574 459

Family's Representative Sequence

Representative Sequence 3300002704|JGI25155J39150_1000008|JGI25155J39150_1000008121
Length 503
Sequence MKVRPMSKFPSRFPQLLAVAAAALLAGCSMIPKYERPAAPVADQWPSASGWTAESAQAQPQPAANTPAAADIEWQAFFSDPQLRKLIDAALRNNRDLRIAVLNIEQARAQYGIRRADQFPTINAGITGSRQPNANGNGSITSAYTGGLIMTSYELDFFGRVAALKESALAQYLATEEGRKTTQISLIAAVANTYLSLLADEELLAITQQTLVTREESFKLSKLRFDNGVSSELDFRQAESLTEAARVSLAQQVRQRALDQNALTLLLGQPLTGELAVALPAGKGLADAPLMIDVPAGLPSDLLTRRPDVRQAEQQLLAANADIGAARAAFFPRISLTASAGSASSHLNGLFKSGSYGWTMAPQLILPLFDAGRNRAGLDSANAGRDIAIAQYEKSIQTAFREVADALAGRATLGEQLRAQQAQANAEATRFKLADLRYQNGVASYLDQLDAQRALFTARQAVVQTRLAQLQSQVTLYKTLGGGWKEPPPEQALSLKSDTQLSR

Samples

Sample ID Description Type Environment
1 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
13 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
16 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
26 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
37 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
38 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
39 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
40 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
54 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
55 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
56 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
57 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
58 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
59 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
60 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
62 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
63 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
76 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
77 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
78 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
79 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
80 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
81 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
87 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
89 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
131 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
132 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
133 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
134 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
135 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
136 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
137 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
138 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
139 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
140 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
141 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
142 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
143 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
144 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
145 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
146 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
147 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
148 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
149 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
150 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
153 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
154 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
155 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
156 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
157 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
158 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
159 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
160 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
161 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
162 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
163 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
164 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
165 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
166 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
167 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
168 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
169 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
170 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
171 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
172 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
173 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
174 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
178 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
181 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
182 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
183 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
186 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
187 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
188 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
189 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
190 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
191 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
192 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
193 2643221556 Massilia sp. Root1485 Isolate Unclassified
194 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
195 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.61
Metatranscriptomes 0
Isolates 1.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23
Nodule 0
Rhizoplane 0.7
Rhizosphere 62.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000008 3300002704 Bacteria 236146
2 JGI25156J39149_1000002 3300002705 Bacteria 343501
3 JGI25154J39366_1000010 3300002738 Bacteria 297985
4 JGI25157J39369_1000001 3300002741 Bacteria 363277
5 JGI25159J45721_1000349 3300002987 Bacteria 21382
6 JGI25159J45721_1000741 3300002987 Bacteria 14264
7 JGI25151J46595_10029464 3300003187 Bacteria 2173
8 rootH1_10043065 3300003316 Bacteria 2140
9 rootL2_10026516 3300003322 Bacteria 12347
10 JGI25160J50197_1000349 3300003354 Bacteria 30734
11 JGI25161J50226_1000076 3300003374 Bacteria 84478
12 Ga0055526_1011038 3300003771 Bacteria 4124
13 Ga0055526_1012189 3300003771 Bacteria 3778
14 Ga0055537_1000609 3300003773 Bacteria 19731
15 Ga0055524_1000130 3300003775 Bacteria 88754
16 Ga0055530_10000265 3300003791 Bacteria 47389
17 Ga0055540_1000685 3300003792 Bacteria 23411
18 Ga0055543_1001097 3300004625 Bacteria 11708
19 Ga0065165_1021077 3300005262 Bacteria 2272
20 Ga0065165_1028393 3300005262 Bacteria 1807
21 Ga0065714_10003926 3300005288 Bacteria 8412
22 Ga0070676_10019698 3300005328 Bacteria 3758
23 Ga0070676_10064299 3300005328 Bacteria 2187
24 Ga0070683_100108077 3300005329 Bacteria 2623
25 Ga0070670_100002390 3300005331 Bacteria 15466
26 Ga0070670_100044605 3300005331 Bacteria 3812
27 Ga0070670_100075206 3300005331 Bacteria 2902
28 Ga0070670_100195018 3300005331 Bacteria 1759
29 Ga0070677_10004215 3300005333 Bacteria 4683
30 Ga0070680_100008521 3300005336 Bacteria 7854
31 Ga0068868_100007577 3300005338 Bacteria 7733
32 Ga0068868_100039749 3300005338 Bacteria 3657
33 Ga0068868_100070750 3300005338 Bacteria 2782
34 Ga0070660_100025105 3300005339 Bacteria 4427
35 Ga0070661_100001667 3300005344 Bacteria 15398
36 Ga0070675_100031426 3300005354 Bacteria 4292
37 Ga0070675_100032750 3300005354 Bacteria 4207
38 Ga0070671_100015498 3300005355 Bacteria 6159
39 Ga0070671_100080496 3300005355 Bacteria 2724
40 Ga0070673_100031607 3300005364 Bacteria 3975
41 Ga0070673_100085461 3300005364 Bacteria 2568
42 Ga0070659_100011680 3300005366 Bacteria 6500
43 Ga0070667_100002201 3300005367 Bacteria 17158
44 Ga0070667_100003049 3300005367 Bacteria 14397
45 Ga0070667_100169893 3300005367 Bacteria 1925
46 Ga0070708_100089903 3300005445 Bacteria 2795
47 Ga0070663_100065637 3300005455 Bacteria 2628
48 Ga0070678_100026590 3300005456 Bacteria 3915
49 Ga0070662_100151558 3300005457 Bacteria 1805
50 Ga0070662_100169886 3300005457 Bacteria 1712
51 Ga0070681_10061514 3300005458 Bacteria 3729
52 Ga0068867_100004662 3300005459 Bacteria 9645
53 Ga0068867_100015702 3300005459 Bacteria 5373
54 Ga0068867_100046229 3300005459 Bacteria 3196
55 Ga0068867_100096374 3300005459 Bacteria 2252
56 Ga0068867_100151336 3300005459 Bacteria 1823
57 Ga0070685_10133173 3300005466 Bacteria 1556
58 Ga0070706_100002733 3300005467 Bacteria 17628
59 Ga0070707_100116371 3300005468 Bacteria 2595
60 Ga0070679_100005692 3300005530 Bacteria 11550
61 Ga0070684_100120866 3300005535 Bacteria 2356
62 Ga0070665_100129495 3300005548 Bacteria 2525
63 Ga0068857_100005818 3300005577 Bacteria 10530
64 Ga0068852_100113427 3300005616 Bacteria 2468
65 Ga0068859_100064108 3300005617 Bacteria 3707
66 Ga0068864_100037347 3300005618 Bacteria 4145
67 Ga0068864_100037901 3300005618 Bacteria 4115
68 Ga0068866_10059539 3300005718 Bacteria 1977
69 Ga0068851_10010223 3300005834 Bacteria 4375
70 Ga0068863_100017413 3300005841 Bacteria 6889
71 Ga0068863_100076002 3300005841 Bacteria 3177
72 Ga0068858_100013891 3300005842 Bacteria 7595
73 Ga0068858_100225667 3300005842 Bacteria 1775
74 Ga0068860_100083364 3300005843 Bacteria 3040
75 Ga0068860_100103353 3300005843 Bacteria 2719
76 Ga0075365_10092797 3300006038 Bacteria 2058
77 Ga0075368_10014039 3300006042 Bacteria 2951
78 Ga0075364_10140852 3300006051 Bacteria 1622
79 Ga0075432_10001070 3300006058 Bacteria 8702
80 Ga0075362_10006893 3300006177 Bacteria 4258
81 Ga0075362_10028023 3300006177 Bacteria 2416
82 Ga0075367_10051772 3300006178 Bacteria 2428
83 Ga0075367_10075537 3300006178 Bacteria 2033
84 Ga0075366_10000388 3300006195 Bacteria 20419
85 Ga0075366_10000651 3300006195 Bacteria 16360
86 Ga0075366_10036236 3300006195 Bacteria 2908
87 Ga0097621_100022873 3300006237 Bacteria 4856
88 Ga0097621_100155008 3300006237 Bacteria 1966
89 Ga0075370_10002102 3300006353 Bacteria 9085
90 Ga0075370_10004394 3300006353 Bacteria 6839
91 Ga0075370_10007299 3300006353 Bacteria 5627
92 Ga0075370_10034978 3300006353 Bacteria 2818
93 Ga0068871_100012517 3300006358 Bacteria 6259
94 Ga0068871_100021149 3300006358 Bacteria 4995
95 Ga0097620_100064106 3300006931 Bacteria 3707
96 Ga0105240_10036573 3300009093 Bacteria 6313
97 Ga0105245_10196216 3300009098 Bacteria 1936
98 Ga0105243_10067215 3300009148 Bacteria 2885
99 Ga0105243_10073303 3300009148 Bacteria 2774
100 Ga0105237_10015569 3300009545 Bacteria 7909
101 Ga0157369_10037524 3300013105 Bacteria 5305
102 Ga0163162_10106423 3300013306 Bacteria 2900
103 Ga0157375_10043584 3300013308 Bacteria 4353
104 Ga0157375_10091844 3300013308 Bacteria 3098
105 Ga0157375_10157451 3300013308 Bacteria 2411
106 Ga0157375_10243652 3300013308 Bacteria 1957
107 Ga0157380_10049573 3300014326 Bacteria 3313
108 Ga0157379_10002725 3300014968 Bacteria 14911
109 Ga0157376_10007554 3300014969 Bacteria 7771
110 Ga0157376_10198894 3300014969 Bacteria 1842
111 Ga0157376_10245361 3300014969 Bacteria 1670
112 Ga0163161_10045584 3300017792 Bacteria 3163
113 Ga0213872_10010204 3300021361 Bacteria 4477
114 Ga0209435_100001 3300025206 Bacteria 1424171
115 Ga0207425_1000956 3300025245 Bacteria 13599
116 Ga0209646_1000001 3300025246 Bacteria 3092932
117 Ga0209026_1000001 3300025250 Bacteria 1228671
118 Ga0209759_1000001 3300025256 Bacteria 2799452
119 Ga0209565_1000096 3300025263 Bacteria 134434
120 Ga0209565_1001960 3300025263 Bacteria 8060
121 Ga0209673_1000232 3300025273 Bacteria 108581
122 Ga0209130_1000041 3300025284 Bacteria 261078
123 Ga0209130_1000508 3300025284 Bacteria 39372
124 Ga0209675_1000128 3300025291 Bacteria 103111
125 Ga0209675_1001587 3300025291 Bacteria 12862
126 Ga0209676_1000054 3300025292 Bacteria 365890
127 Ga0209025_1004396 3300025294 Bacteria 12269
128 Ga0209025_1005674 3300025294 Bacteria 10055
129 Ga0209025_1014846 3300025294 Bacteria 4749
130 Ga0209025_1016897 3300025294 Bacteria 4257
131 Ga0209564_1003778 3300025295 Bacteria 9853
132 Ga0209564_1003782 3300025295 Bacteria 9851
133 Ga0209758_1017665 3300025297 Bacteria 3535
134 Ga0209050_1000066 3300025298 Bacteria 305458
135 Ga0209050_1002593 3300025298 Bacteria 14985
136 Ga0209050_1020754 3300025298 Bacteria 2429
137 Ga0209256_1000003 3300025299 Bacteria 1661127
138 Ga0207426_1000061 3300025302 Bacteria 362507
139 Ga0209051_1000044 3300025303 Bacteria 305458
140 Ga0209257_1000082 3300025304 Bacteria 305458
141 Ga0207656_10005416 3300025321 Bacteria 4509
142 Ga0207656_10012502 3300025321 Bacteria 3229
143 Ga0207682_10008711 3300025893 Bacteria 4013
144 Ga0207645_10075851 3300025907 Bacteria 2152
145 Ga0207643_10069782 3300025908 Bacteria 2020
146 Ga0207660_10009737 3300025917 Bacteria 6220
147 Ga0207657_10109396 3300025919 Bacteria 2284
148 Ga0207649_10015459 3300025920 Bacteria 4289
149 Ga0207652_10014914 3300025921 Bacteria 6300
150 Ga0207646_10045325 3300025922 Bacteria 3948
151 Ga0207694_10069931 3300025924 Bacteria 2743
152 Ga0207650_10001509 3300025925 Bacteria 16629
153 Ga0207650_10007976 3300025925 Bacteria 7218
154 Ga0207659_10127057 3300025926 Bacteria 1962
155 Ga0207687_10051313 3300025927 Bacteria 2875
156 Ga0207644_10020205 3300025931 Bacteria 4526
157 Ga0207644_10032983 3300025931 Bacteria 3616
158 Ga0207644_10035095 3300025931 Bacteria 3512
159 Ga0207644_10038767 3300025931 Bacteria 3359
160 Ga0207644_10043832 3300025931 Bacteria 3176
161 Ga0207709_10043353 3300025935 Bacteria 2711
162 Ga0207669_10103507 3300025937 Bacteria 1888
163 Ga0207669_10135311 3300025937 Bacteria 1701
164 Ga0207704_10120534 3300025938 Bacteria 1794
165 Ga0207704_10167390 3300025938 Bacteria 1572
166 Ga0207691_10001450 3300025940 Bacteria 23610
167 Ga0207689_10085585 3300025942 Bacteria 2591
168 Ga0207661_10064355 3300025944 Bacteria 2972
169 Ga0207679_10006305 3300025945 Bacteria 7489
170 Ga0207651_10155538 3300025960 Bacteria 1786
171 Ga0207640_10064394 3300025981 Bacteria 2441
172 Ga0207658_10015662 3300025986 Bacteria 5205
173 Ga0207658_10069527 3300025986 Bacteria 2660
174 Ga0207677_10001728 3300026023 Bacteria 11574
175 Ga0207677_10023798 3300026023 Bacteria 3790
176 Ga0207677_10151908 3300026023 Bacteria 1788
177 Ga0207703_10004931 3300026035 Bacteria 10831
178 Ga0207678_10222542 3300026067 Bacteria 1616
179 Ga0207702_10051592 3300026078 Bacteria 3477
180 Ga0207641_10022287 3300026088 Bacteria 5213
181 Ga0207641_10024499 3300026088 Bacteria 4974
182 Ga0207648_10005574 3300026089 Bacteria 12665
183 Ga0207648_10046261 3300026089 Bacteria 3815
184 Ga0207648_10083667 3300026089 Bacteria 2783
185 Ga0207648_10091330 3300026089 Bacteria 2662
186 Ga0207648_10178499 3300026089 Bacteria 1879
187 Ga0207648_10222548 3300026089 Bacteria 1677
188 Ga0207676_10004408 3300026095 Bacteria 9951
189 Ga0207676_10009267 3300026095 Bacteria 7003
190 Ga0207674_10030339 3300026116 Bacteria 5685
191 Ga0207674_10087540 3300026116 Bacteria 3108
192 Ga0207674_10108764 3300026116 Bacteria 2749
193 Ga0207683_10060106 3300026121 Bacteria 3340
194 Ga0207698_10020095 3300026142 Bacteria 4590
195 Ga0207698_10091349 3300026142 Bacteria 2492
196 Ga0268266_10103456 3300028379 Bacteria 2513
197 Ga0268266_10114260 3300028379 Bacteria 2395
198 Ga0268264_10009150 3300028381 Bacteria 8210
199 Ga0307517_10007370 3300028786 Bacteria 16050
200 Ga0307517_10026503 3300028786 Bacteria 7022
201 Ga0307515_10001329 3300028794 Bacteria 56020
202 Ga0307515_10026336 3300028794 Bacteria 10016
203 Ga0307515_10035752 3300028794 Bacteria 8066
204 Ga0307515_10152319 3300028794 Bacteria 2409
205 Ga0307515_10164321 3300028794 Bacteria 2246
206 Ga0307512_10093627 3300030522 Bacteria 2078
207 Ga0265332_10000009 3300031238 Bacteria 295760
208 Ga0307513_10000012 3300031456 Bacteria 328865
209 Ga0307513_10000021 3300031456 Bacteria 228078
210 Ga0307513_10078431 3300031456 Bacteria 3416
211 Ga0307509_10000139 3300031507 Bacteria 108589
212 Ga0307509_10008900 3300031507 Bacteria 12662
213 Ga0307408_100062421 3300031548 Bacteria 2723
214 Ga0307408_100105393 3300031548 Bacteria 2155
215 Ga0307508_10007863 3300031616 Bacteria 9898
216 Ga0307516_10001118 3300031730 Bacteria 37358
217 Ga0307516_10146116 3300031730 Bacteria 2130
218 Ga0307405_10156399 3300031731 Bacteria 1609
219 Ga0307406_10023681 3300031901 Bacteria 3657
220 Ga0307412_10015100 3300031911 Bacteria 4570
221 Ga0307409_100017132 3300031995 Bacteria 4818
222 Ga0307416_100012376 3300032002 Bacteria 5746
223 Ga0307411_10001308 3300032005 Bacteria 10014
224 Ga0307415_100012454 3300032126 Bacteria 4918
225 Ga0307507_10047687 3300033179 Bacteria 4179
226 Ga0307510_10020205 3300033180 Bacteria 7789
227 Ga0307510_10112570 3300033180 Bacteria 2458
228 Ga0436361_0028349 3300039447 Bacteria 2596
229 Ga0436361_0312564 3300039447 Bacteria 6546
230 Ga0436361_1181870 3300039447 Bacteria 9899
231 Ga0439452_001542 3300042010 Bacteria 9278
232 Ga0450911_000313 3300042115 Bacteria 17513
233 Ga0451577_0000186 3300042876 Bacteria 131630
234 Ga0466972_0002260 3300044658 Bacteria 9473
235 Ga0453683_0002995 3300044673 Bacteria 12659
236 Ga0453684_0000121 3300044712 Bacteria 341067
237 Ga0466968_0002359 3300044735 Bacteria 6903
238 Ga0466959_0073449 3300045049 Bacteria 2474
239 Ga0451576_0004895 3300045051 Bacteria 17111
240 Ga0451576_0004934 3300045051 Bacteria 16988
241 Ga0451576_0217519 3300045051 Bacteria 1995
242 Ga0495592_0000350 3300046454 Bacteria 37566
243 Ga0495591_001556 3300046458 Bacteria 14002
244 Ga0495650_0007761 3300046471 Bacteria 6384
245 Ga0495583_0000049 3300046506 Bacteria 216069
246 Ga0495654_0000774 3300046530 Bacteria 24689
247 Ga0495597_0003060 3300046542 Bacteria 10071
248 Ga0495597_0009669 3300046542 Bacteria 4750
249 Ga0495625_0013498 3300046660 Bacteria 6561
250 Ga0495658_0021477 3300046683 Bacteria 3404
251 Ga0495670_0032700 3300046691 Bacteria 2587
252 Ga0495649_0002031 3300046694 Bacteria 14626
253 Ga0495660_0021820 3300046810 Bacteria 3663
254 Ga0495676_0045404 3300047321 Bacteria 3576
255 Ga0495687_000070 3300047443 Bacteria 159227
256 Ga0495686_0003066 3300047472 Bacteria 14813
257 Ga0495593_0004427 3300047673 Bacteria 8351
258 Ga0496104_0048779 3300048907 Bacteria 3992
259 Ga0496108_0034181 3300048911 Bacteria 4223
260 Ga0496121_0015415 3300048924 Bacteria 8011
261 Ga0496122_0019968 3300048925 Bacteria 6091
262 Ga0496124_0053689 3300048927 Bacteria 3414
263 Ga0496125_0003867 3300048928 Bacteria 17719
264 Ga0496125_0012211 3300048928 Bacteria 8545
265 Ga0496125_0013230 3300048928 Bacteria 8123
266 Ga0496125_0042325 3300048928 Bacteria 3881
267 Ga0496126_0039566 3300048929 Bacteria 4374
268 Ga0501037_0101193 3300049573 Bacteria 2080
269 nmdc:mga0k408_1302_c1 3300050493 Bacteria 13497
270 nmdc:mga0k408_6077_c1 3300050493 Bacteria 6075
271 nmdc:mga06z11_53931_c1 3300050494 Bacteria 2070
272 nmdc:mga07m45_22122_c1 3300050496 Bacteria 3470
273 nmdc:mga07m45_27226_c1 3300050496 Bacteria 3148
274 nmdc:mga07m45_5290_c1 3300050496 Bacteria 6419
275 Ga0500651_0017984 3300053093 Bacteria 4371
276 Ga0500562_001501 3300053108 Bacteria 5763
277 Ga0500593_006874 3300053117 Bacteria 4583
278 Ga0500559_0000252 3300053136 Bacteria 42525
279 Ga0500568_0029369 3300053139 Bacteria 2283
280 Ga0500616_0055023 3300053153 Bacteria 2082
281 Ga0500645_001054 3300053730 Bacteria 15314
282 Ga0500645_012000 3300053730 Bacteria 2810
283 Ga0500661_001250 3300055283 Bacteria 4754
284 2511245538 2511231002 Bacteria 5042903
285 2643798304 2643221556 Bacteria 7251154
286 2644303736 2643221654 Bacteria 5273570
287 2939636365 2939631187 Bacteria 6118131
288 JGI25155J39150_1000008
289 JGI25156J39149_1000002
290 JGI25154J39366_1000010
291 JGI25157J39369_1000001
292 JGI25159J45721_1000349
293 JGI25159J45721_1000741
294 JGI25151J46595_10029464
295 rootH1_10043065
296 rootL2_10026516
297 JGI25160J50197_1000349
298 JGI25161J50226_1000076
299 Ga0055526_1011038
300 Ga0055526_1012189
301 Ga0055537_1000609
302 Ga0055524_1000130
303 Ga0055530_10000265
304 Ga0055540_1000685
305 Ga0055543_1001097
306 Ga0065165_1021077
307 Ga0065165_1028393
308 Ga0065714_10003926
309 Ga0070676_10019698
310 Ga0070676_10064299
311 Ga0070683_100108077
312 Ga0070670_100002390
313 Ga0070670_100044605
314 Ga0070670_100075206
315 Ga0070670_100195018
316 Ga0070677_10004215
317 Ga0070680_100008521
318 Ga0068868_100007577
319 Ga0068868_100039749
320 Ga0068868_100070750
321 Ga0070660_100025105
322 Ga0070661_100001667
323 Ga0070675_100031426
324 Ga0070675_100032750
325 Ga0070671_100015498
326 Ga0070671_100080496
327 Ga0070673_100031607
328 Ga0070673_100085461
329 Ga0070659_100011680
330 Ga0070667_100002201
331 Ga0070667_100003049
332 Ga0070667_100169893
333 Ga0070708_100089903
334 Ga0070663_100065637
335 Ga0070678_100026590
336 Ga0070662_100151558
337 Ga0070662_100169886
338 Ga0070681_10061514
339 Ga0068867_100004662
340 Ga0068867_100015702
341 Ga0068867_100046229
342 Ga0068867_100096374
343 Ga0068867_100151336
344 Ga0070685_10133173
345 Ga0070706_100002733
346 Ga0070707_100116371
347 Ga0070679_100005692
348 Ga0070684_100120866
349 Ga0070665_100129495
350 Ga0068857_100005818
351 Ga0068852_100113427
352 Ga0068859_100064108
353 Ga0068864_100037347
354 Ga0068864_100037901
355 Ga0068866_10059539
356 Ga0068851_10010223
357 Ga0068863_100017413
358 Ga0068863_100076002
359 Ga0068858_100013891
360 Ga0068858_100225667
361 Ga0068860_100083364
362 Ga0068860_100103353
363 Ga0075365_10092797
364 Ga0075368_10014039
365 Ga0075364_10140852
366 Ga0075432_10001070
367 Ga0075362_10006893
368 Ga0075362_10028023
369 Ga0075367_10051772
370 Ga0075367_10075537
371 Ga0075366_10000388
372 Ga0075366_10000651
373 Ga0075366_10036236
374 Ga0097621_100022873
375 Ga0097621_100155008
376 Ga0075370_10002102
377 Ga0075370_10004394
378 Ga0075370_10007299
379 Ga0075370_10034978
380 Ga0068871_100012517
381 Ga0068871_100021149
382 Ga0097620_100064106
383 Ga0105240_10036573
384 Ga0105245_10196216
385 Ga0105243_10067215
386 Ga0105243_10073303
387 Ga0105237_10015569
388 Ga0157369_10037524
389 Ga0163162_10106423
390 Ga0157375_10043584
391 Ga0157375_10091844
392 Ga0157375_10157451
393 Ga0157375_10243652
394 Ga0157380_10049573
395 Ga0157379_10002725
396 Ga0157376_10007554
397 Ga0157376_10198894
398 Ga0157376_10245361
399 Ga0163161_10045584
400 Ga0213872_10010204
401 Ga0209435_100001
402 Ga0207425_1000956
403 Ga0209646_1000001
404 Ga0209026_1000001
405 Ga0209759_1000001
406 Ga0209565_1000096
407 Ga0209565_1001960
408 Ga0209673_1000232
409 Ga0209130_1000041
410 Ga0209130_1000508
411 Ga0209675_1000128
412 Ga0209675_1001587
413 Ga0209676_1000054
414 Ga0209025_1004396
415 Ga0209025_1005674
416 Ga0209025_1014846
417 Ga0209025_1016897
418 Ga0209564_1003778
419 Ga0209564_1003782
420 Ga0209758_1017665
421 Ga0209050_1000066
422 Ga0209050_1002593
423 Ga0209050_1020754
424 Ga0209256_1000003
425 Ga0207426_1000061
426 Ga0209051_1000044
427 Ga0209257_1000082
428 Ga0207656_10005416
429 Ga0207656_10012502
430 Ga0207682_10008711
431 Ga0207645_10075851
432 Ga0207643_10069782
433 Ga0207660_10009737
434 Ga0207657_10109396
435 Ga0207649_10015459
436 Ga0207652_10014914
437 Ga0207646_10045325
438 Ga0207694_10069931
439 Ga0207650_10001509
440 Ga0207650_10007976
441 Ga0207659_10127057
442 Ga0207687_10051313
443 Ga0207644_10020205
444 Ga0207644_10032983
445 Ga0207644_10035095
446 Ga0207644_10038767
447 Ga0207644_10043832
448 Ga0207709_10043353
449 Ga0207669_10103507
450 Ga0207669_10135311
451 Ga0207704_10120534
452 Ga0207704_10167390
453 Ga0207691_10001450
454 Ga0207689_10085585
455 Ga0207661_10064355
456 Ga0207679_10006305
457 Ga0207651_10155538
458 Ga0207640_10064394
459 Ga0207658_10015662
460 Ga0207658_10069527
461 Ga0207677_10001728
462 Ga0207677_10023798
463 Ga0207677_10151908
464 Ga0207703_10004931
465 Ga0207678_10222542
466 Ga0207702_10051592
467 Ga0207641_10022287
468 Ga0207641_10024499
469 Ga0207648_10005574
470 Ga0207648_10046261
471 Ga0207648_10083667
472 Ga0207648_10091330
473 Ga0207648_10178499
474 Ga0207648_10222548
475 Ga0207676_10004408
476 Ga0207676_10009267
477 Ga0207674_10030339
478 Ga0207674_10087540
479 Ga0207674_10108764
480 Ga0207683_10060106
481 Ga0207698_10020095
482 Ga0207698_10091349
483 Ga0268266_10103456
484 Ga0268266_10114260
485 Ga0268264_10009150
486 Ga0307517_10007370
487 Ga0307517_10026503
488 Ga0307515_10001329
489 Ga0307515_10026336
490 Ga0307515_10035752
491 Ga0307515_10152319
492 Ga0307515_10164321
493 Ga0307512_10093627
494 Ga0265332_10000009
495 Ga0307513_10000012
496 Ga0307513_10000021
497 Ga0307513_10078431
498 Ga0307509_10000139
499 Ga0307509_10008900
500 Ga0307408_100062421
501 Ga0307408_100105393
502 Ga0307508_10007863
503 Ga0307516_10001118
504 Ga0307516_10146116
505 Ga0307405_10156399
506 Ga0307406_10023681
507 Ga0307412_10015100
508 Ga0307409_100017132
509 Ga0307416_100012376
510 Ga0307411_10001308
511 Ga0307415_100012454
512 Ga0307507_10047687
513 Ga0307510_10020205
514 Ga0307510_10112570
515 Ga0436361_0028349
516 Ga0436361_0312564
517 Ga0436361_1181870
518 Ga0439452_001542
519 Ga0450911_000313
520 Ga0451577_0000186
521 Ga0466972_0002260
522 Ga0453683_0002995
523 Ga0453684_0000121
524 Ga0466968_0002359
525 Ga0466959_0073449
526 Ga0451576_0004895
527 Ga0451576_0004934
528 Ga0451576_0217519
529 Ga0495592_0000350
530 Ga0495591_001556
531 Ga0495650_0007761
532 Ga0495583_0000049
533 Ga0495654_0000774
534 Ga0495597_0003060
535 Ga0495597_0009669
536 Ga0495625_0013498
537 Ga0495658_0021477
538 Ga0495670_0032700
539 Ga0495649_0002031
540 Ga0495660_0021820
541 Ga0495676_0045404
542 Ga0495687_000070
543 Ga0495686_0003066
544 Ga0495593_0004427
545 Ga0496104_0048779
546 Ga0496108_0034181
547 Ga0496121_0015415
548 Ga0496122_0019968
549 Ga0496124_0053689
550 Ga0496125_0003867
551 Ga0496125_0012211
552 Ga0496125_0013230
553 Ga0496125_0042325
554 Ga0496126_0039566
555 Ga0501037_0101193
556 nmdc:mga0k408_1302_c1
557 nmdc:mga0k408_6077_c1
558 nmdc:mga06z11_53931_c1
559 nmdc:mga07m45_22122_c1
560 nmdc:mga07m45_27226_c1
561 nmdc:mga07m45_5290_c1
562 Ga0500651_0017984
563 Ga0500562_001501
564 Ga0500593_006874
565 Ga0500559_0000252
566 Ga0500568_0029369
567 Ga0500616_0055023
568 Ga0500645_001054
569 Ga0500645_012000
570 Ga0500661_001250
571 2511245538
572 2643798304
573 2644303736
574 2939636365

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

296

481

0.98

PF02321

OEP

Outer membrane efflux protein

83

268

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5azs-assembly1.cif.gz_B crystal structure of a membrane protein from pseudomonas aeruginosa 0.9157 28 480
5azs-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.9153 28 480
5azs-assembly1.cif.gz_B crystal structure of a membrane protein from pseudomonas aeruginosa 0.9116 28 480
5azs-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.9112 28 480
5azs-assembly1.cif.gz_C crystal structure of a membrane protein from pseudomonas aeruginosa 0.9097 28 489
ID Description Score Start End Superfamily
2v4dJ04 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.972 412 466 1.10.287.470
1vf7G03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9709 412 466 1.10.287.470
5azsA01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.9439 28 480 1.20.1600.10
5azsA01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.9386 28 480 1.20.1600.10
1wp1B01 Mainly Alpha;Up-down Bundle;Outer membrane efflux proteins (OEP);Outer membrane efflux proteins (OEP) 0.9266 67 485 1.20.1600.10
ID Description Score Start End GO Terms
AF-A0A841MXC2-F1-model_v4 deleted 0.9357 315 479
AF-A0A2D7LAP5-F1-model_v4 deleted 0.9314 169 488
AF-A0A2D7LAP5-F1-model_v4 deleted 0.9257 169 488
AF-C0VLH0-F1-model_v4 Efflux transporter, outer membrane factor lipoprotein, NodT family 0.9201 66 483 GO:0009279
GO:0015562
AF-A0A1C4A0Y6-F1-model_v4 Outer membrane protein, multidrug efflux system 0.9082 14 485 GO:0009279
GO:0015562

Map