F387971

General Info

Members Datasets Scaffolds Average Seq Length
287 213 574 291

Family's Representative Sequence

Representative Sequence 3300007265|Ga0099794_10047100|Ga0099794_100471002
Length 332
Sequence MEFDWMKRRDFVSLLGGAVAWPLAARAQQPAAAPAEARGGGFDPRITPARRDIAAKHLAGVVEAQRFVEGKAYEIAAAQAPVRDAPAHEAELLTEALKGERVTIYDISQDGWAWGQLAGDGYVGFVPASALRKPGPAATHKVTALRTFVFPGPSIKLPPVETLSFGAQLVIARQDEAFAITASGGHVPILHVAPVETLETDFVAVAERFLGTPYLWGGKTSLGIDCSGLVQLSLAACGIPCPRDSDRQEQAVGGALAWSGEPRQLRRGDLVFWKGHVAIVRDAATFLHANSHHMAVALEGSAAAIVRIRASASEVTSVRRLPPAAGPKLTKR

Samples

Sample ID Description Type Environment
1 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
52 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
53 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
62 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
63 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
64 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
65 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
66 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
67 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
68 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
69 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
72 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
80 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
87 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
88 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
89 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
90 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
91 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
92 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
99 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
112 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
113 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
114 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
115 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
116 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
117 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
118 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
121 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
122 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
137 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
140 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
161 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
170 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
171 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
172 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
177 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
178 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
179 3300053089 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 endosphere Metagenome Endosphere
180 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
181 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
182 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
183 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
184 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
185 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
186 3300053115 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 endosphere Metagenome Endosphere
187 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
188 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
189 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
190 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
191 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
192 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
193 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
194 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
195 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
196 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
197 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
198 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
199 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
200 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
201 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
202 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
203 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
204 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
205 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
206 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
207 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
208 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
209 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
210 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
211 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
212 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
213 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.26
Metatranscriptomes 0
Isolates 1.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.42
Nodule 0.7
Rhizoplane 3.48
Rhizosphere 67.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099794_10047100 3300007265 Bacteria 2067
2 JGI24740J21852_10007574 3300001979 Bacteria 4399
3 Ga0055526_1050436 3300003771 Bacteria 954
4 Ga0070680_100025519 3300005336 Bacteria 4724
5 Ga0070689_100005028 3300005340 Bacteria 8988
6 Ga0070675_100387665 3300005354 Bacteria 1245
7 Ga0070673_100313916 3300005364 Bacteria 1383
8 Ga0070709_10110000 3300005434 Bacteria 1850
9 Ga0070714_100003064 3300005435 Bacteria 12401
10 Ga0070714_100029759 3300005435 Bacteria 4542
11 Ga0070714_100040255 3300005435 Bacteria 3938
12 Ga0070714_100107725 3300005435 Bacteria 2463
13 Ga0070714_100400729 3300005435 Bacteria 1297
14 Ga0070710_10114511 3300005437 Bacteria 1624
15 Ga0070710_10395635 3300005437 Bacteria 925
16 Ga0068853_100121284 3300005539 Bacteria 2332
17 Ga0070686_100138331 3300005544 Bacteria 1692
18 Ga0068855_100228758 3300005563 Bacteria 2083
19 Ga0068857_100016503 3300005577 Bacteria 6470
20 Ga0068854_100001788 3300005578 Bacteria 13097
21 Ga0068856_100001074 3300005614 Bacteria 28942
22 Ga0081538_10027870 3300005981 Bacteria 3902
23 Ga0081538_10032533 3300005981 Bacteria 3492
24 Ga0081540_1000075 3300005983 Bacteria 106804
25 Ga0081540_1031843 3300005983 Bacteria 2890
26 Ga0075365_10026390 3300006038 Bacteria 3688
27 Ga0075365_10038355 3300006038 Bacteria 3114
28 Ga0075365_10124771 3300006038 Bacteria 1778
29 Ga0070716_100480702 3300006173 Bacteria 912
30 Ga0070712_100001591 3300006175 Bacteria 13875
31 Ga0070712_100030661 3300006175 Bacteria 3617
32 Ga0075362_10059758 3300006177 Bacteria 1722
33 Ga0075367_10027305 3300006178 Bacteria 3246
34 Ga0075369_10011630 3300006186 Bacteria 3464
35 Ga0075370_10196930 3300006353 Bacteria 1188
36 Ga0075430_100007558 3300006846 Bacteria 9178
37 Ga0075431_100403132 3300006847 Bacteria 1368
38 Ga0075434_100162654 3300006871 Bacteria 2252
39 Ga0075434_100166271 3300006871 Bacteria 2226
40 Ga0075434_100216913 3300006871 Bacteria 1933
41 Ga0075429_100033313 3300006880 Bacteria 4476
42 Ga0105240_10015073 3300009093 Bacteria 10522
43 Ga0105240_10683292 3300009093 Bacteria 1122
44 Ga0105247_10050238 3300009101 Bacteria 2565
45 Ga0114129_10041604 3300009147 Bacteria 6473
46 Ga0105238_10004460 3300009551 Bacteria 13879
47 Ga0213875_10000011 3300021388 Bacteria 332447
48 Ga0209148_1007349 3300025254 Bacteria 2298
49 Ga0209455_1003550 3300025272 Bacteria 5458
50 Ga0209564_1013829 3300025295 Bacteria 3396
51 Ga0207699_10024331 3300025906 Bacteria 3311
52 Ga0207654_10000201 3300025911 Bacteria 36898
53 Ga0207695_10000343 3300025913 Bacteria 107739
54 Ga0207693_10001659 3300025915 Bacteria 19621
55 Ga0207693_10033727 3300025915 Bacteria 4039
56 Ga0207663_10061814 3300025916 Bacteria 2378
57 Ga0207700_10296056 3300025928 Bacteria 1396
58 Ga0207664_10052260 3300025929 Bacteria 3231
59 Ga0207664_10094574 3300025929 Bacteria 2456
60 Ga0207665_10125853 3300025939 Bacteria 1814
61 Ga0207667_10087733 3300025949 Bacteria 3218
62 Ga0207678_10026649 3300026067 Bacteria 5043
63 Ga0207702_10000006 3300026078 Bacteria 346370
64 Ga0207674_10003146 3300026116 Bacteria 20343
65 Ga0209588_1003419 3300027671 Bacteria 4407
66 Ga0265332_10015005 3300031238 Bacteria 3424
67 Ga0265340_10007452 3300031247 Bacteria 5941
68 Ga0265340_10071903 3300031247 Bacteria 1638
69 Ga0265339_10000281 3300031249 Bacteria 41044
70 Ga0265339_10027511 3300031249 Bacteria 3245
71 Ga0265331_10009429 3300031250 Bacteria 5479
72 Ga0307408_100116538 3300031548 Bacteria 2062
73 Ga0265313_10034473 3300031595 Bacteria 2559
74 Ga0265342_10000525 3300031712 Bacteria 40764
75 Ga0265342_10015650 3300031712 Bacteria 4984
76 Ga0307406_10055035 3300031901 Bacteria 2542
77 Ga0307412_10457172 3300031911 Bacteria 1053
78 Ga0307411_10030272 3300032005 Bacteria 3316
79 Ga0373926_0038407 3300035083 Bacteria 1705
80 Ga0373936_0000171 3300035113 Bacteria 21558
81 Ga0373945_0016082 3300035116 Bacteria 2520
82 Ga0373954_0001399 3300035118 Bacteria 9776
83 Ga0373957_0012761 3300035120 Bacteria 2835
84 Ga0373943_0003963 3300035170 Bacteria 6739
85 Ga0373946_0000384 3300035171 Bacteria 14370
86 Ga0373955_0000031 3300035172 Bacteria 56668
87 Ga0373924_0003709 3300035410 Bacteria 5276
88 Ga0373935_0000461 3300035692 Bacteria 21136
89 Ga0373927_0012097 3300035695 Bacteria 5740
90 Ga0373927_0074886 3300035695 Bacteria 2192
91 Ga0373933_0000638 3300035724 Bacteria 21867
92 Ga0373947_0003132 3300035725 Bacteria 9843
93 Ga0373937_0000098 3300036401 Bacteria 81900
94 Ga0373925_0000198 3300037068 Bacteria 65543
95 Ga0373925_0035472 3300037068 Bacteria 3680
96 Ga0436364_0622718 3300037853 Bacteria 37563
97 Ga0436364_0691095 3300037853 Bacteria 1442
98 Ga0436364_0979033 3300037853 Bacteria 2709
99 Ga0395901_0007193 3300038443 Bacteria 11225
100 Ga0436365_0250699 3300039437 Bacteria 2509
101 Ga0436365_1737250 3300039437 Bacteria 1735
102 Ga0436360_0171871 3300039438 Bacteria 1289
103 Ga0466959_0062071 3300045049 Bacteria 2717
104 Ga0466959_0246266 3300045049 Bacteria 1233
105 Ga0466967_0476838 3300045976 Bacteria 1222
106 Ga0495592_0000119 3300046454 Bacteria 69687
107 Ga0495629_0166751 3300046459 Bacteria 1529
108 Ga0495638_0005285 3300046460 Bacteria 9645
109 Ga0495638_0087922 3300046460 Bacteria 1876
110 Ga0495651_0001255 3300046462 Bacteria 19643
111 Ga0495653_0000030 3300046463 Bacteria 142668
112 Ga0495662_0001102 3300046476 Bacteria 13286
113 Ga0495664_0000003 3300046477 Bacteria 551602
114 Ga0495607_0094023 3300046501 Bacteria 1618
115 Ga0495583_0101532 3300046506 Bacteria 1227
116 Ga0495608_0000011 3300046511 Bacteria 248514
117 Ga0495608_0255589 3300046511 Bacteria 1092
118 Ga0495610_0143764 3300046512 Bacteria 1024
119 Ga0495618_0000025 3300046514 Bacteria 116027
120 Ga0495628_0000001 3300046516 Bacteria 917742
121 Ga0495630_0001782 3300046517 Bacteria 15063
122 Ga0495631_0054479 3300046518 Bacteria 1744
123 Ga0495643_0211908 3300046522 Bacteria 924
124 Ga0495652_0000002 3300046529 Bacteria 946606
125 Ga0495640_0000002 3300046533 Bacteria 646434
126 Ga0495587_0000001 3300046536 Bacteria 724132
127 Ga0495645_0000002 3300046543 Bacteria 651644
128 Ga0495633_0111272 3300046558 Bacteria 1270
129 Ga0495667_0000004 3300046559 Bacteria 295297
130 Ga0495656_0056689 3300046615 Bacteria 1694
131 Ga0495634_0000010 3300046642 Bacteria 143792
132 Ga0495625_0069080 3300046660 Bacteria 2482
133 Ga0495635_0000001 3300046663 Bacteria 704901
134 Ga0495659_0082746 3300046664 Bacteria 1221
135 Ga0495661_0015273 3300046665 Bacteria 5126
136 Ga0495657_0000369 3300046675 Bacteria 41664
137 Ga0495599_0000013 3300046678 Bacteria 179828
138 Ga0495623_0000024 3300046679 Bacteria 96499
139 Ga0495646_0000009 3300046680 Bacteria 200698
140 Ga0495670_0043667 3300046691 Bacteria 2237
141 Ga0495671_0080752 3300046692 Bacteria 1593
142 Ga0495600_0000071 3300046809 Bacteria 55914
143 Ga0495581_0012373 3300047315 Bacteria 4943
144 Ga0495581_0073636 3300047315 Bacteria 1977
145 Ga0495581_0162714 3300047315 Bacteria 1305
146 Ga0495604_0000069 3300047317 Bacteria 89935
147 Ga0495674_0000002 3300047319 Bacteria 642785
148 Ga0495674_0495151 3300047319 Bacteria 978
149 Ga0495680_0000853 3300047322 Bacteria 33888
150 Ga0495675_0000274 3300047444 Bacteria 37360
151 Ga0495685_003236 3300047447 Bacteria 5182
152 Ga0495684_0000083 3300047471 Bacteria 65861
153 Ga0495593_0001248 3300047673 Bacteria 14916
154 Ga0495602_0000024 3300048088 Bacteria 151162
155 Ga0495615_0024959 3300048090 Bacteria 1384
156 Ga0496104_0027020 3300048907 Bacteria 5306
157 Ga0496105_0014639 3300048908 Bacteria 6246
158 Ga0496105_0059085 3300048908 Bacteria 3164
159 Ga0496106_0175368 3300048909 Bacteria 1700
160 Ga0496109_0347935 3300048912 Bacteria 1400
161 Ga0496110_0166834 3300048913 Bacteria 1997
162 Ga0496112_0222782 3300048915 Bacteria 1842
163 Ga0496112_0332522 3300048915 Bacteria 1463
164 Ga0496115_0098524 3300048918 Bacteria 2394
165 Ga0496117_0037111 3300048920 Bacteria 3635
166 Ga0496118_0011870 3300048921 Bacteria 8441
167 Ga0496118_0050365 3300048921 Bacteria 3197
168 Ga0496119_0119231 3300048922 Bacteria 1453
169 Ga0496120_0011735 3300048923 Bacteria 6006
170 Ga0496121_0001687 3300048924 Bacteria 36333
171 Ga0496121_0008066 3300048924 Bacteria 12547
172 Ga0496121_0013885 3300048924 Bacteria 8613
173 Ga0496121_0038107 3300048924 Bacteria 4262
174 Ga0496121_0043836 3300048924 Bacteria 3868
175 Ga0496122_0048066 3300048925 Bacteria 3286
176 Ga0496123_0094693 3300048926 Bacteria 1759
177 Ga0496124_0052576 3300048927 Bacteria 3460
178 Ga0496124_0374961 3300048927 Bacteria 997
179 Ga0496125_0000154 3300048928 Bacteria 152240
180 Ga0496125_0000823 3300048928 Bacteria 50271
181 Ga0496125_0187832 3300048928 Bacteria 1368
182 Ga0496126_0004033 3300048929 Bacteria 17863
183 Ga0496126_0069127 3300048929 Bacteria 3151
184 Ga0496126_0080360 3300048929 Bacteria 2885
185 Ga0496126_0094586 3300048929 Bacteria 2622
186 Ga0496126_0799660 3300048929 Bacteria 724
187 Ga0501031_0002176 3300049568 Bacteria 12377
188 Ga0501032_0064311 3300049569 Bacteria 2455
189 Ga0501033_0001342 3300049570 Bacteria 21886
190 Ga0501033_0009478 3300049570 Bacteria 7499
191 Ga0501034_0045237 3300049571 Bacteria 4449
192 Ga0501034_0107088 3300049571 Bacteria 2788
193 Ga0501034_0440638 3300049571 Bacteria 1221
194 Ga0501036_0013872 3300049572 Bacteria 6702
195 Ga0501036_0093226 3300049572 Bacteria 2544
196 Ga0501037_0004149 3300049573 Bacteria 10509
197 Ga0501038_0064055 3300049574 Bacteria 3136
198 Ga0501038_0230797 3300049574 Bacteria 1473
199 Ga0501038_0274494 3300049574 Bacteria 1328
200 Ga0501039_0050895 3300049575 Bacteria 3205
201 Ga0501040_0327810 3300049576 Bacteria 1095
202 Ga0501042_0076140 3300049578 Bacteria 2402
203 Ga0501042_0080997 3300049578 Bacteria 2326
204 Ga0501043_0004779 3300049579 Bacteria 10972
205 Ga0501043_0013844 3300049579 Bacteria 6313
206 Ga0501046_0018323 3300049580 Bacteria 5828
207 Ga0501046_0048733 3300049580 Bacteria 3353
208 Ga0501048_0060780 3300049582 Bacteria 2677
209 Ga0501048_0080068 3300049582 Bacteria 2305
210 Ga0501071_0053730 3300049587 Bacteria 2906
211 Ga0501071_0107236 3300049587 Bacteria 2063
212 Ga0501072_0019806 3300049588 Bacteria 5206
213 Ga0501073_0155512 3300049589 Bacteria 1585
214 Ga0501074_0069943 3300049590 Bacteria 2524
215 Ga0501075_0033330 3300049591 Bacteria 3832
216 Ga0501076_0144405 3300049592 Bacteria 1934
217 Ga0501077_0049936 3300049593 Bacteria 2659
218 Ga0501079_0053653 3300049741 Bacteria 3110
219 Ga0501079_0124093 3300049741 Bacteria 2009
220 Ga0501079_0195189 3300049741 Bacteria 1580
221 Ga0501079_0214746 3300049741 Bacteria 1502
222 Ga0501080_0182586 3300049742 Bacteria 1930
223 Ga0501081_0024395 3300049743 Bacteria 4061
224 Ga0501081_0031017 3300049743 Bacteria 3622
225 Ga0501081_0114776 3300049743 Bacteria 1914
226 Ga0501081_0125421 3300049743 Bacteria 1831
227 Ga0501035_0001311 3300049822 Bacteria 25709
228 Ga0501035_0019356 3300049822 Bacteria 6262
229 Ga0501044_0415803 3300049823 Bacteria 1255
230 nmdc:mga00v17_10843_c1 3300050491 Bacteria 4411
231 nmdc:mga00v17_171782_c1 3300050491 Bacteria 1398
232 nmdc:mga0yw44_43515_c1 3300050492 Bacteria 2681
233 nmdc:mga0yw44_44363_c1 3300050492 Bacteria 2659
234 nmdc:mga07m45_91752_c1 3300050496 Bacteria 1740
235 nmdc:mga0qj67_129_c1 3300050509 Bacteria 50064
236 nmdc:mga0qj67_311466_c1 3300050509 Bacteria 1275
237 nmdc:mga0n895_130889_c1 3300050512 Bacteria 2534
238 nmdc:mga0n895_274337_c1 3300050512 Bacteria 1710
239 nmdc:mga0n895_27580_c1 3300050512 Bacteria 5397
240 nmdc:mga0sz30_6528_c2 3300050516 Bacteria 3577
241 Ga0495601_0000001 3300053077 Bacteria 549454
242 Ga0495612_0000017 3300053078 Bacteria 152112
243 Ga0495595_0000010 3300053084 Bacteria 178819
244 Ga0495619_0000004 3300053085 Bacteria 500068
245 Ga0500581_115452 3300053089 Bacteria 1302
246 Ga0500651_0043948 3300053093 Bacteria 2813
247 Ga0500566_0000191 3300053094 Bacteria 31941
248 Ga0500641_0066705 3300053096 Bacteria 1507
249 Ga0500650_0015863 3300053098 Bacteria 3219
250 Ga0500650_0119677 3300053098 Bacteria 1228
251 Ga0500562_045587 3300053108 Bacteria 1168
252 Ga0500572_000153 3300053111 Bacteria 23968
253 Ga0500572_000186 3300053111 Bacteria 21909
254 Ga0500591_048482 3300053115 Bacteria 1997
255 Ga0500592_003559 3300053116 Bacteria 2485
256 Ga0500595_006506 3300053119 Bacteria 4948
257 Ga0500608_026174 3300053122 Bacteria 2737
258 Ga0500614_004948 3300053123 Bacteria 2800
259 Ga0500642_0000142 3300053130 Bacteria 32016
260 Ga0500652_000068 3300053131 Bacteria 45116
261 Ga0500652_001091 3300053131 Bacteria 8752
262 Ga0500559_0001758 3300053136 Bacteria 11888
263 Ga0500559_0009776 3300053136 Bacteria 4137
264 Ga0500568_0004453 3300053139 Bacteria 7481
265 Ga0500577_0004932 3300053142 Bacteria 3555
266 Ga0500586_035718 3300053145 Bacteria 1663
267 Ga0500603_002302 3300053150 Bacteria 4196
268 Ga0500616_0000784 3300053153 Bacteria 36530
269 Ga0500616_0092354 3300053153 Bacteria 1497
270 Ga0500630_000365 3300053159 Bacteria 19125
271 Ga0500634_0103868 3300053161 Bacteria 1416
272 Ga0500639_000031 3300053163 Bacteria 69938
273 Ga0500636_0008790 3300053177 Bacteria 5860
274 Ga0500636_0022792 3300053177 Bacteria 3701
275 Ga0500637_0018518 3300053178 Bacteria 3743
276 Ga0500576_115257 3300053725 Bacteria 1069
277 Ga0500596_008712 3300053735 Bacteria 1610
278 Ga0501084_0181309 3300054114 Bacteria 1778
279 Ga0501082_0065177 3300060353 Bacteria 3137
280 Ga0530510_0059278 3300061734 Bacteria 2769
281 Ga0530510_0065290 3300061734 Bacteria 2637
282 Ga0530510_0135628 3300061734 Bacteria 1812
283 2513891591 2513237141 Bacteria 8496279
284 2603857137 2602042107 Bacteria 6226103
285 2857530858 2857524615 Bacteria 6615449
286 2919077928 2919073203 Bacteria 6531949
287 8006966298 8006964411 Bacteria 8966052
288 Ga0099794_10047100
289 JGI24740J21852_10007574
290 Ga0055526_1050436
291 Ga0070680_100025519
292 Ga0070689_100005028
293 Ga0070675_100387665
294 Ga0070673_100313916
295 Ga0070709_10110000
296 Ga0070714_100003064
297 Ga0070714_100029759
298 Ga0070714_100040255
299 Ga0070714_100107725
300 Ga0070714_100400729
301 Ga0070710_10114511
302 Ga0070710_10395635
303 Ga0068853_100121284
304 Ga0070686_100138331
305 Ga0068855_100228758
306 Ga0068857_100016503
307 Ga0068854_100001788
308 Ga0068856_100001074
309 Ga0081538_10027870
310 Ga0081538_10032533
311 Ga0081540_1000075
312 Ga0081540_1031843
313 Ga0075365_10026390
314 Ga0075365_10038355
315 Ga0075365_10124771
316 Ga0070716_100480702
317 Ga0070712_100001591
318 Ga0070712_100030661
319 Ga0075362_10059758
320 Ga0075367_10027305
321 Ga0075369_10011630
322 Ga0075370_10196930
323 Ga0075430_100007558
324 Ga0075431_100403132
325 Ga0075434_100162654
326 Ga0075434_100166271
327 Ga0075434_100216913
328 Ga0075429_100033313
329 Ga0105240_10015073
330 Ga0105240_10683292
331 Ga0105247_10050238
332 Ga0114129_10041604
333 Ga0105238_10004460
334 Ga0213875_10000011
335 Ga0209148_1007349
336 Ga0209455_1003550
337 Ga0209564_1013829
338 Ga0207699_10024331
339 Ga0207654_10000201
340 Ga0207695_10000343
341 Ga0207693_10001659
342 Ga0207693_10033727
343 Ga0207663_10061814
344 Ga0207700_10296056
345 Ga0207664_10052260
346 Ga0207664_10094574
347 Ga0207665_10125853
348 Ga0207667_10087733
349 Ga0207678_10026649
350 Ga0207702_10000006
351 Ga0207674_10003146
352 Ga0209588_1003419
353 Ga0265332_10015005
354 Ga0265340_10007452
355 Ga0265340_10071903
356 Ga0265339_10000281
357 Ga0265339_10027511
358 Ga0265331_10009429
359 Ga0307408_100116538
360 Ga0265313_10034473
361 Ga0265342_10000525
362 Ga0265342_10015650
363 Ga0307406_10055035
364 Ga0307412_10457172
365 Ga0307411_10030272
366 Ga0373926_0038407
367 Ga0373936_0000171
368 Ga0373945_0016082
369 Ga0373954_0001399
370 Ga0373957_0012761
371 Ga0373943_0003963
372 Ga0373946_0000384
373 Ga0373955_0000031
374 Ga0373924_0003709
375 Ga0373935_0000461
376 Ga0373927_0012097
377 Ga0373927_0074886
378 Ga0373933_0000638
379 Ga0373947_0003132
380 Ga0373937_0000098
381 Ga0373925_0000198
382 Ga0373925_0035472
383 Ga0436364_0622718
384 Ga0436364_0691095
385 Ga0436364_0979033
386 Ga0395901_0007193
387 Ga0436365_0250699
388 Ga0436365_1737250
389 Ga0436360_0171871
390 Ga0466959_0062071
391 Ga0466959_0246266
392 Ga0466967_0476838
393 Ga0495592_0000119
394 Ga0495629_0166751
395 Ga0495638_0005285
396 Ga0495638_0087922
397 Ga0495651_0001255
398 Ga0495653_0000030
399 Ga0495662_0001102
400 Ga0495664_0000003
401 Ga0495607_0094023
402 Ga0495583_0101532
403 Ga0495608_0000011
404 Ga0495608_0255589
405 Ga0495610_0143764
406 Ga0495618_0000025
407 Ga0495628_0000001
408 Ga0495630_0001782
409 Ga0495631_0054479
410 Ga0495643_0211908
411 Ga0495652_0000002
412 Ga0495640_0000002
413 Ga0495587_0000001
414 Ga0495645_0000002
415 Ga0495633_0111272
416 Ga0495667_0000004
417 Ga0495656_0056689
418 Ga0495634_0000010
419 Ga0495625_0069080
420 Ga0495635_0000001
421 Ga0495659_0082746
422 Ga0495661_0015273
423 Ga0495657_0000369
424 Ga0495599_0000013
425 Ga0495623_0000024
426 Ga0495646_0000009
427 Ga0495670_0043667
428 Ga0495671_0080752
429 Ga0495600_0000071
430 Ga0495581_0012373
431 Ga0495581_0073636
432 Ga0495581_0162714
433 Ga0495604_0000069
434 Ga0495674_0000002
435 Ga0495674_0495151
436 Ga0495680_0000853
437 Ga0495675_0000274
438 Ga0495685_003236
439 Ga0495684_0000083
440 Ga0495593_0001248
441 Ga0495602_0000024
442 Ga0495615_0024959
443 Ga0496104_0027020
444 Ga0496105_0014639
445 Ga0496105_0059085
446 Ga0496106_0175368
447 Ga0496109_0347935
448 Ga0496110_0166834
449 Ga0496112_0222782
450 Ga0496112_0332522
451 Ga0496115_0098524
452 Ga0496117_0037111
453 Ga0496118_0011870
454 Ga0496118_0050365
455 Ga0496119_0119231
456 Ga0496120_0011735
457 Ga0496121_0001687
458 Ga0496121_0008066
459 Ga0496121_0013885
460 Ga0496121_0038107
461 Ga0496121_0043836
462 Ga0496122_0048066
463 Ga0496123_0094693
464 Ga0496124_0052576
465 Ga0496124_0374961
466 Ga0496125_0000154
467 Ga0496125_0000823
468 Ga0496125_0187832
469 Ga0496126_0004033
470 Ga0496126_0069127
471 Ga0496126_0080360
472 Ga0496126_0094586
473 Ga0496126_0799660
474 Ga0501031_0002176
475 Ga0501032_0064311
476 Ga0501033_0001342
477 Ga0501033_0009478
478 Ga0501034_0045237
479 Ga0501034_0107088
480 Ga0501034_0440638
481 Ga0501036_0013872
482 Ga0501036_0093226
483 Ga0501037_0004149
484 Ga0501038_0064055
485 Ga0501038_0230797
486 Ga0501038_0274494
487 Ga0501039_0050895
488 Ga0501040_0327810
489 Ga0501042_0076140
490 Ga0501042_0080997
491 Ga0501043_0004779
492 Ga0501043_0013844
493 Ga0501046_0018323
494 Ga0501046_0048733
495 Ga0501048_0060780
496 Ga0501048_0080068
497 Ga0501071_0053730
498 Ga0501071_0107236
499 Ga0501072_0019806
500 Ga0501073_0155512
501 Ga0501074_0069943
502 Ga0501075_0033330
503 Ga0501076_0144405
504 Ga0501077_0049936
505 Ga0501079_0053653
506 Ga0501079_0124093
507 Ga0501079_0195189
508 Ga0501079_0214746
509 Ga0501080_0182586
510 Ga0501081_0024395
511 Ga0501081_0031017
512 Ga0501081_0114776
513 Ga0501081_0125421
514 Ga0501035_0001311
515 Ga0501035_0019356
516 Ga0501044_0415803
517 nmdc:mga00v17_10843_c1
518 nmdc:mga00v17_171782_c1
519 nmdc:mga0yw44_43515_c1
520 nmdc:mga0yw44_44363_c1
521 nmdc:mga07m45_91752_c1
522 nmdc:mga0qj67_129_c1
523 nmdc:mga0qj67_311466_c1
524 nmdc:mga0n895_130889_c1
525 nmdc:mga0n895_274337_c1
526 nmdc:mga0n895_27580_c1
527 nmdc:mga0sz30_6528_c2
528 Ga0495601_0000001
529 Ga0495612_0000017
530 Ga0495595_0000010
531 Ga0495619_0000004
532 Ga0500581_115452
533 Ga0500651_0043948
534 Ga0500566_0000191
535 Ga0500641_0066705
536 Ga0500650_0015863
537 Ga0500650_0119677
538 Ga0500562_045587
539 Ga0500572_000153
540 Ga0500572_000186
541 Ga0500591_048482
542 Ga0500592_003559
543 Ga0500595_006506
544 Ga0500608_026174
545 Ga0500614_004948
546 Ga0500642_0000142
547 Ga0500652_000068
548 Ga0500652_001091
549 Ga0500559_0001758
550 Ga0500559_0009776
551 Ga0500568_0004453
552 Ga0500577_0004932
553 Ga0500586_035718
554 Ga0500603_002302
555 Ga0500616_0000784
556 Ga0500616_0092354
557 Ga0500630_000365
558 Ga0500634_0103868
559 Ga0500639_000031
560 Ga0500636_0008790
561 Ga0500636_0022792
562 Ga0500637_0018518
563 Ga0500576_115257
564 Ga0500596_008712
565 Ga0501084_0181309
566 Ga0501082_0065177
567 Ga0530510_0059278
568 Ga0530510_0065290
569 Ga0530510_0135628
570 2513891591
571 2603857137
572 2857530858
573 2919077928
574 8006966298

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18348

SH3_16

Bacterial dipeptidyl-peptidase Sh3 domain

82

131

0.98

PF08239

SH3_3

Bacterial SH3 domain

78

132

0.93

PF00877

NLPC_P60

NlpC/P60 family

211

308

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8er5-assembly1.cif.gz_B crystal structure of nlpc/p60 domain from clostridium innocuum nlpc/p60 domain-containing protein ci_01448. 0.8706 161 279
3pvq-assembly1.cif.gz_B crystal structure of a putative dipeptidyl-peptidase vi (bt_1314) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution 0.8595 31 280
4r0k-assembly1.cif.gz_A crystal structure of a putative dipeptidyl-peptidase vi (bt_1314) from bacteroides thetaiotaomicron vpi-5482 at 1.75 a resolution 0.8539 30 280
2krs-assembly1.cif.gz_A solution nmr structure of sh3 domain from cpf_0587 (fragment 415-479) from clostridium perfringens. northeast structural genomics consortium (nesg) target cpr74a. 0.8483 31 92
7ud6-assembly1.cif.gz_A designed enzyme sh3-588 (catechol o-methyltransferase catalytic domain and src homology 3 binding domain fusion) 0.8437 31 92
ID Description Score Start End Superfamily
af_Q2FXU3_37_103_2.30.30.40 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.9248 32 92 2.30.30.40
4m4zA01 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.9237 55 92 2.30.30.40
4krtB03 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.8832 31 93 2.30.30.40
af_P0ADT8_18_85_2.30.30.40 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.8777 28 90 2.30.30.40
af_P9WHU3_241_385_3.90.1720.10 Alpha Beta;Alpha-Beta Complex;endopeptidase fold (from Nostoc punctiforme);endopeptidase domain like (from Nostoc punctiforme) 0.8693 162 279 3.90.1720.10
ID Description Score Start End GO Terms
AF-J3I2D2-F1-model_v4 Cell wall-associated hydrolase, invasion-associated protein 0.998 198 280 GO:0008234
AF-A0A837CA50-F1-model_v4 NlpC/P60 domain-containing protein 0.9978 3 280 GO:0008234
AF-A0A1I3JY52-F1-model_v4 NlpC/P60 family protein 0.9971 1 280 GO:0008234
AF-A0A7S7ZAI2-F1-model_v4 Peptidase P60 0.9967 1 280 GO:0008234
AF-A0A1G7X4W8-F1-model_v4 Cell wall-associated hydrolase, NlpC family 0.9962 1 280 GO:0008234

Map