F388209

General Info

Members Datasets Scaffolds Average Seq Length
287 226 574 487

Family's Representative Sequence

Representative Sequence 3300047446|Ga0495679_000482|Ga0495679_000482_10685_12229
Length 514
Sequence VTTAVHWFSAAVATPKSPESADPSVLEKKMIKTSLQHIESLRDGRSVYINGEKVDDVTTHPAFASSIEWLSNLYDYQHDHLELMTTVDPDTGERYNRIWQLPKSPEDLKQRRMALEAWTGLSCGFLGRAPDHVASCISGMVMGVERFEQYDKVRAENLRNYYRYARDNDLYLTYVIINPQADRSKSTGEQADEFLTAGIAAEDDEGITIRGAKMLATGGIMANEVLVTCLQPLKKGEEEKYAVSFAIPMNAPGLKILSRKSYEEHNQSVFQNPLSSRFDENDALLYFDNVKVSWDRVFVHRDTDMCMAQFHETPAHVYQNYQAQVRLMVKMRFLAGVAYRTAEMNGIIGLPQVREKLGQIAAEAAISESFVNGMESKGSYVGEYYIPDRHLLYASQVIAQQLYPKFISRLRDLAGGGVIMLPSSTQDFANPEMRELIEKTQQSPIANAVERVKFFNLAWDAIGSEYASRHTQYEMFYSGATFVTKGASFRTFDWKRSASLLDGFASQYDLNEEI

Samples

Sample ID Description Type Environment
1 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
2 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
3 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
4 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
5 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
40 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
82 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
87 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
88 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
96 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
97 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
98 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
99 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
100 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
103 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
104 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
105 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
106 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
107 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
110 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
111 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
112 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
116 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
117 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
126 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
127 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
128 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
131 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
132 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
153 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
159 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
160 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
161 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
162 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
163 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
164 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
165 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
166 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
167 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
168 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
169 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
170 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
171 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
172 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
173 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
174 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
175 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
176 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
177 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
178 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
179 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
180 2643221651 Afipia sp. Root123D2 Isolate Unclassified
181 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
182 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
183 2818991452 Burkholderia cepacia 561 Isolate Unclassified
184 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
185 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
186 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
187 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
188 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
189 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
190 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
191 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
192 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
193 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
194 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
195 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
196 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
197 2888343758 Mesorhizobium sp. AA22 Isolate Unclassified
198 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
199 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
200 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
201 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
202 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
203 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
204 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
205 2924754689 Mesorhizobium sp. M5C.F.Ca.IN.020.32.2.1 Isolate Nodule
206 2928170801 Burkholderia sp. 572 Isolate Unclassified
207 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
208 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
209 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
210 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
211 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
212 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
213 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
214 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
215 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
216 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
217 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
218 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
219 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
220 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
221 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
222 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
223 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
224 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
225 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
226 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.09
Metatranscriptomes 0
Isolates 20.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.59
Nodule 11.15
Rhizoplane 4.88
Rhizosphere 53.31
Stem 0
Stem Tuber 0
Unclassified 0.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495679_000482 3300047446 Bacteria 28817
2 Ga0055527_1000163 3300003760 Bacteria 46039
3 Ga0055535_1000347 3300003761 Bacteria 46008
4 Ga0055542_1000319 3300003762 Bacteria 51627
5 Ga0055529_1000345 3300003763 Bacteria 51627
6 Ga0055526_1000647 3300003771 Bacteria 27036
7 Ga0055524_1000064 3300003775 Bacteria 133574
8 Ga0065714_10076881 3300005288 Bacteria 2744
9 Ga0070683_100064280 3300005329 Bacteria 3415
10 Ga0070680_100015904 3300005336 Bacteria 5908
11 Ga0070660_100019131 3300005339 Bacteria 5014
12 Ga0070668_100045787 3300005347 Bacteria 3357
13 Ga0070669_100045137 3300005353 Bacteria 3211
14 Ga0070659_100037296 3300005366 Bacteria 3788
15 Ga0070667_100000053 3300005367 Bacteria 151974
16 Ga0070667_100003326 3300005367 Bacteria 13731
17 Ga0070714_100000239 3300005435 Bacteria 42937
18 Ga0070714_100043755 3300005435 Bacteria 3789
19 Ga0070713_100000849 3300005436 Bacteria 19595
20 Ga0070694_100003335 3300005444 Bacteria 9607
21 Ga0070708_100047504 3300005445 Bacteria 3792
22 Ga0070663_100060841 3300005455 Bacteria 2718
23 Ga0070681_10005469 3300005458 Bacteria 12271
24 Ga0070681_10012896 3300005458 Bacteria 8299
25 Ga0070707_100222501 3300005468 Bacteria 1838
26 Ga0070695_100021236 3300005545 Bacteria 3970
27 Ga0070696_100011595 3300005546 Bacteria 5906
28 Ga0070696_100199188 3300005546 Bacteria 1494
29 Ga0070665_100029364 3300005548 Bacteria 5534
30 Ga0070704_100008027 3300005549 Bacteria 6305
31 Ga0068855_100183601 3300005563 Bacteria 2364
32 Ga0068856_100042596 3300005614 Bacteria 4466
33 Ga0068852_100019094 3300005616 Bacteria 5417
34 Ga0068863_100028795 3300005841 Bacteria 5304
35 Ga0068860_100000224 3300005843 Bacteria 88107
36 Ga0081455_10065473 3300005937 Bacteria 3039
37 Ga0081538_10028208 3300005981 Bacteria 3868
38 Ga0081538_10039872 3300005981 Bacteria 3005
39 Ga0070717_10000144 3300006028 Bacteria 53223
40 Ga0070717_10008191 3300006028 Bacteria 7805
41 Ga0075365_10030923 3300006038 Bacteria 3433
42 Ga0075363_100052455 3300006048 Bacteria 2177
43 Ga0075430_100040065 3300006846 Bacteria 3965
44 Ga0075433_10027445 3300006852 Bacteria 4829
45 Ga0099794_10005900 3300007265 Bacteria 4939
46 Ga0099795_10012453 3300007788 Bacteria 2580
47 Ga0105240_10027741 3300009093 Bacteria 7410
48 Ga0105240_10043686 3300009093 Bacteria 5699
49 Ga0105240_10183512 3300009093 Bacteria 2467
50 Ga0111539_10239927 3300009094 Bacteria 2110
51 Ga0114129_10048839 3300009147 Bacteria 5948
52 Ga0105239_10208422 3300010375 Bacteria 2190
53 Ga0157369_10033349 3300013105 Bacteria 5659
54 Ga0157372_10021107 3300013307 Bacteria 7034
55 Ga0157375_10128933 3300013308 Bacteria 2648
56 Ga0182008_10000506 3300014497 Bacteria 29319
57 Ga0213875_10037634 3300021388 Bacteria 2279
58 Ga0209566_100660 3300025225 Bacteria 20710
59 Ga0209674_101255 3300025226 Bacteria 7124
60 Ga0209672_100093 3300025228 Bacteria 115446
61 Ga0209147_100074 3300025229 Bacteria 208743
62 Ga0209147_100134 3300025229 Bacteria 118581
63 Ga0209258_100209 3300025242 Bacteria 118581
64 Ga0209148_1000184 3300025254 Bacteria 118581
65 Ga0209455_1000160 3300025272 Bacteria 118581
66 Ga0209675_1001015 3300025291 Bacteria 17586
67 Ga0209025_1001674 3300025294 Bacteria 27135
68 Ga0209025_1001694 3300025294 Bacteria 26906
69 Ga0209564_1000048 3300025295 Bacteria 364806
70 Ga0209564_1000838 3300025295 Bacteria 41472
71 Ga0209758_1000715 3300025297 Bacteria 49020
72 Ga0209256_1000041 3300025299 Bacteria 364827
73 Ga0207647_10010381 3300025904 Bacteria 6577
74 Ga0207707_10010502 3300025912 Bacteria 8038
75 Ga0207695_10021144 3300025913 Bacteria 7432
76 Ga0207663_10019307 3300025916 Bacteria 3836
77 Ga0207652_10159550 3300025921 Bacteria 2021
78 Ga0207646_10055604 3300025922 Bacteria 3538
79 Ga0207646_10198246 3300025922 Bacteria 1813
80 Ga0207700_10001272 3300025928 Bacteria 14386
81 Ga0207664_10001683 3300025929 Bacteria 14553
82 Ga0207664_10104924 3300025929 Bacteria 2341
83 Ga0207665_10081869 3300025939 Bacteria 2224
84 Ga0207640_10129129 3300025981 Bacteria 1824
85 Ga0207658_10000074 3300025986 Bacteria 110470
86 Ga0207658_10001014 3300025986 Bacteria 22911
87 Ga0207703_10168389 3300026035 Bacteria 1925
88 Ga0207678_10062355 3300026067 Bacteria 3205
89 Ga0207641_10000883 3300026088 Bacteria 31302
90 Ga0207698_10011600 3300026142 Bacteria 5722
91 Ga0268266_10041392 3300028379 Bacteria 3931
92 Ga0268264_10000161 3300028381 Bacteria 150917
93 Ga0307515_10206787 3300028794 Bacteria 1820
94 Ga0265338_10088533 3300028800 Bacteria 2568
95 Ga0265339_10015767 3300031249 Bacteria 4521
96 Ga0307408_100032475 3300031548 Bacteria 3640
97 Ga0265314_10115338 3300031711 Bacteria 1700
98 Ga0307516_10024611 3300031730 Bacteria 6148
99 Ga0307412_10015597 3300031911 Bacteria 4510
100 Ga0373953_0035492 3300035117 Bacteria 1960
101 Ga0373927_0022669 3300035695 Bacteria 4112
102 Ga0373947_0110700 3300035725 Bacteria 1735
103 Ga0373937_0119041 3300036401 Bacteria 2460
104 Ga0373925_0031930 3300037068 Bacteria 3874
105 Ga0395900_0058427 3300037418 Bacteria 3970
106 Ga0395900_0111784 3300037418 Bacteria 2805
107 Ga0395905_0199908 3300037471 Bacteria 1874
108 Ga0436364_0704198 3300037853 Bacteria 4459
109 Ga0436364_1098943 3300037853 Bacteria 11571
110 Ga0436364_1562850 3300037853 Bacteria 7906
111 Ga0395901_0000004 3300038443 Bacteria 657361
112 Ga0237819_00680 3300038705 Bacteria 11068
113 Ga0436360_0108989 3300039438 Bacteria 5570
114 Ga0466972_0038636 3300044658 Bacteria 2331
115 Ga0466977_0003279 3300044666 Bacteria 7794
116 Ga0466963_0010294 3300044694 Bacteria 5660
117 Ga0495629_0000037 3300046459 Bacteria 117099
118 Ga0495653_0000048 3300046463 Bacteria 109560
119 Ga0495664_0083607 3300046477 Bacteria 1915
120 Ga0495583_0003335 3300046506 Bacteria 12418
121 Ga0495628_0011073 3300046516 Bacteria 7632
122 Ga0495648_0000094 3300046524 Bacteria 110608
123 Ga0495648_0023663 3300046524 Bacteria 4199
124 Ga0495640_0061211 3300046533 Bacteria 2558
125 Ga0495609_0032724 3300046538 Bacteria 2361
126 Ga0495645_0002149 3300046543 Bacteria 13377
127 Ga0495622_0000490 3300046557 Bacteria 24967
128 Ga0495661_0003460 3300046665 Bacteria 11655
129 Ga0495646_0032129 3300046680 Bacteria 3267
130 Ga0495624_0001218 3300046690 Bacteria 20272
131 Ga0495674_0002056 3300047319 Bacteria 19727
132 Ga0495674_0005323 3300047319 Bacteria 12343
133 Ga0495672_0000866 3300047320 Bacteria 31907
134 Ga0495672_0023046 3300047320 Bacteria 4037
135 Ga0495673_0003294 3300047469 Bacteria 10717
136 Ga0495673_0010746 3300047469 Bacteria 4960
137 Ga0495593_0009614 3300047673 Bacteria 5614
138 Ga0495614_0040277 3300048089 Bacteria 2006
139 Ga0496101_0081702 3300048904 Bacteria 2391
140 Ga0496104_0064242 3300048907 Bacteria 3482
141 Ga0496105_0096032 3300048908 Bacteria 2448
142 Ga0496106_0037682 3300048909 Bacteria 3618
143 Ga0496106_0095356 3300048909 Bacteria 2301
144 Ga0496110_0087747 3300048913 Bacteria 2778
145 Ga0496114_0096123 3300048917 Bacteria 2522
146 Ga0496114_0097111 3300048917 Bacteria 2509
147 Ga0496115_0014592 3300048918 Bacteria 5949
148 Ga0496116_0019766 3300048919 Bacteria 5146
149 Ga0496117_0017567 3300048920 Bacteria 5969
150 Ga0496117_0027643 3300048920 Bacteria 4413
151 Ga0496117_0058089 3300048920 Bacteria 2681
152 Ga0496118_0007612 3300048921 Bacteria 11410
153 Ga0496118_0042766 3300048921 Bacteria 3570
154 Ga0496118_0047075 3300048921 Bacteria 3348
155 Ga0496120_0043211 3300048923 Bacteria 2627
156 Ga0496121_0002143 3300048924 Bacteria 30998
157 Ga0496121_0054180 3300048924 Bacteria 3354
158 Ga0496122_0018925 3300048925 Bacteria 6324
159 Ga0496122_0094855 3300048925 Bacteria 2018
160 Ga0496123_0005902 3300048926 Bacteria 12090
161 Ga0496124_0096737 3300048927 Bacteria 2398
162 Ga0496125_0001744 3300048928 Bacteria 30228
163 Ga0496125_0003766 3300048928 Bacteria 18045
164 Ga0496125_0106326 3300048928 Bacteria 2048
165 Ga0496126_0005352 3300048929 Bacteria 14668
166 Ga0496126_0009239 3300048929 Bacteria 10509
167 Ga0496126_0036954 3300048929 Bacteria 4562
168 Ga0496126_0038631 3300048929 Bacteria 4439
169 Ga0496126_0052038 3300048929 Bacteria 3725
170 Ga0501031_0075400 3300049568 Bacteria 2196
171 Ga0501032_0044212 3300049569 Bacteria 3015
172 Ga0501032_0047261 3300049569 Bacteria 2906
173 Ga0501033_0001953 3300049570 Bacteria 17941
174 Ga0501033_0008314 3300049570 Bacteria 8037
175 Ga0501033_0030253 3300049570 Bacteria 4069
176 Ga0501033_0044623 3300049570 Bacteria 3300
177 Ga0501034_0001734 3300049571 Bacteria 28043
178 Ga0501034_0040138 3300049571 Bacteria 4739
179 Ga0501034_0070890 3300049571 Bacteria 3495
180 Ga0501034_0093018 3300049571 Bacteria 3012
181 Ga0501034_0145883 3300049571 Bacteria 2344
182 Ga0501036_0028439 3300049572 Bacteria 4724
183 Ga0501036_0051056 3300049572 Bacteria 3502
184 Ga0501037_0071827 3300049573 Bacteria 2517
185 Ga0501038_0028764 3300049574 Bacteria 4934
186 Ga0501038_0031170 3300049574 Bacteria 4713
187 Ga0501039_0020846 3300049575 Bacteria 5025
188 Ga0501039_0048040 3300049575 Bacteria 3299
189 Ga0501043_0004712 3300049579 Bacteria 11057
190 Ga0501043_0030269 3300049579 Bacteria 4253
191 Ga0501047_0037109 3300049581 Bacteria 4711
192 Ga0501047_0043530 3300049581 Bacteria 4337
193 Ga0501047_0087017 3300049581 Bacteria 3002
194 Ga0501047_0127859 3300049581 Bacteria 2421
195 Ga0501048_0060003 3300049582 Bacteria 2695
196 Ga0501070_0027109 3300049586 Bacteria 4806
197 Ga0501073_0112937 3300049589 Bacteria 1884
198 Ga0501035_0018665 3300049822 Bacteria 6387
199 Ga0501035_0028832 3300049822 Bacteria 5064
200 Ga0501035_0078866 3300049822 Bacteria 2908
201 Ga0501044_0000337 3300049823 Bacteria 59417
202 Ga0501044_0018973 3300049823 Bacteria 7364
203 Ga0501044_0025897 3300049823 Bacteria 6217
204 Ga0501044_0057559 3300049823 Bacteria 3989
205 Ga0501045_0064071 3300049824 Bacteria 2698
206 nmdc:mga03n38_23672_c1 3300050490 Bacteria 2502
207 nmdc:mga0yw44_10633_c1 3300050492 Bacteria 4710
208 nmdc:mga06z11_34947_c1 3300050494 Bacteria 2470
209 nmdc:mga05p37_25583_c1 3300050507 Bacteria 7180
210 nmdc:mga0qj67_21163_c1 3300050509 Bacteria 4987
211 nmdc:mga06r32_235497_c1 3300050510 Unclassified 1818
212 nmdc:mga0a205_40690_c1 3300050515 Bacteria 4474
213 Ga0495619_0035271 3300053085 Bacteria 3253
214 Ga0495619_0064191 3300053085 Bacteria 2448
215 Ga0500556_0000003 3300053104 Bacteria 679379
216 Ga0500556_0000006 3300053104 Bacteria 453982
217 Ga0500569_000419 3300053109 Bacteria 6914
218 Ga0500592_000673 3300053116 Bacteria 5635
219 Ga0500595_009530 3300053119 Bacteria 3915
220 Ga0500607_078346 3300053121 Bacteria 1689
221 Ga0500642_0000004 3300053130 Bacteria 433122
222 Ga0500652_002175 3300053131 Bacteria 5891
223 Ga0500559_0000030 3300053136 Bacteria 115347
224 Ga0500616_0000022 3300053153 Bacteria 460463
225 Ga0500616_0003245 3300053153 Bacteria 12583
226 Ga0500622_0002509 3300053156 Bacteria 13185
227 Ga0500634_0013883 3300053161 Bacteria 4237
228 2509146927 2508501128 Bacteria 8613869
229 2509149428 2508501128 Bacteria 8613869
230 2513591125 2513237087 Bacteria 5817514
231 2513671218 2513237098 Bacteria 9902361
232 2513671428 2513237098 Bacteria 9902361
233 2514017088 2513237161 Bacteria 8871253
234 2524463909 2524023210 Bacteria 9029266
235 2599735644 2599185239 Bacteria 8686614
236 2600022207 2599185316 Bacteria 6320029
237 2600075481 2599185325 Bacteria 6324919
238 2603858434 2602042107 Bacteria 6226103
239 2623500442 2622736605 Bacteria 4992138
240 2644289104 2643221651 Bacteria 4798932
241 2770199890 2767802442 Bacteria 5747986
242 2776911257 2775507049 Bacteria 6284736
243 2819630324 2818991452 Bacteria 8442785
244 2828307694 2828305725 Bacteria 4916900
245 2840764549 2840764183 Bacteria 6358399
246 2847932455 2847930680 Bacteria 9342022
247 2857526474 2857524615 Bacteria 6615449
248 2863423585 2863421361 Bacteria 7300805
249 2871498382 2871495908 Bacteria 6935695
250 2874617469 2874612657 Bacteria 8252029
251 2878762602 2878760144 Bacteria 6823465
252 2878769569 2878767105 Bacteria 6898628
253 2881153477 2881147464 Bacteria 7779814
254 2885378866 2885374607 Bacteria 8927485
255 2885386897 2885383462 Bacteria 9473874
256 2885418969 2885409591 Bacteria 9235467
257 2888349364 2888343758 Bacteria 6611049
258 2893067284 2893066018 Bacteria 6158120
259 2900643344 2900634093 Bacteria 10263517
260 2903543177 2903540706 Bacteria 7062119
261 2903768632 2903768456 Bacteria 9749579
262 2903769614 2903768456 Bacteria 9749579
263 2908746384 2908739725 Bacteria 8628932
264 2919073709 2919073203 Bacteria 6531949
265 2923562698 2923556063 Bacteria 6793593
266 2924755407 2924754689 Bacteria 6774424
267 2928177766 2928170801 Bacteria 8785406
268 2935650182 2935648319 Bacteria 8801166
269 2935658329 2935656913 Bacteria 8965014
270 2936013259 2936011229 Bacteria 8801034
271 2936021654 2936019824 Bacteria 8804134
272 2936030552 2936028420 Bacteria 8965941
273 2936047848 2936046547 Bacteria 8903709
274 2936057850 2936055302 Bacteria 8785755
275 2937826425 2937822353 Bacteria 7290551
276 2937997030 2937994558 Bacteria 7036190
277 2958167499 2958165035 Bacteria 6906348
278 2961165971 2961163497 Bacteria 6901077
279 2965020790 2965018300 Bacteria 6883036
280 2968174369 2968171901 Bacteria 6894245
281 2970557460 2970554993 Bacteria 6814252
282 2987661978 2987659509 Bacteria 6966464
283 2989350925 2989349275 Bacteria 6349068
284 3004191027 3004188549 Bacteria 6952365
285 8018853157 8018845410 Bacteria 8933938
286 8021121136 8021120328 Bacteria 8782274
287 8056682530 8056681323 Bacteria 8472857
288 Ga0495679_000482
289 Ga0055527_1000163
290 Ga0055535_1000347
291 Ga0055542_1000319
292 Ga0055529_1000345
293 Ga0055526_1000647
294 Ga0055524_1000064
295 Ga0065714_10076881
296 Ga0070683_100064280
297 Ga0070680_100015904
298 Ga0070660_100019131
299 Ga0070668_100045787
300 Ga0070669_100045137
301 Ga0070659_100037296
302 Ga0070667_100000053
303 Ga0070667_100003326
304 Ga0070714_100000239
305 Ga0070714_100043755
306 Ga0070713_100000849
307 Ga0070694_100003335
308 Ga0070708_100047504
309 Ga0070663_100060841
310 Ga0070681_10005469
311 Ga0070681_10012896
312 Ga0070707_100222501
313 Ga0070695_100021236
314 Ga0070696_100011595
315 Ga0070696_100199188
316 Ga0070665_100029364
317 Ga0070704_100008027
318 Ga0068855_100183601
319 Ga0068856_100042596
320 Ga0068852_100019094
321 Ga0068863_100028795
322 Ga0068860_100000224
323 Ga0081455_10065473
324 Ga0081538_10028208
325 Ga0081538_10039872
326 Ga0070717_10000144
327 Ga0070717_10008191
328 Ga0075365_10030923
329 Ga0075363_100052455
330 Ga0075430_100040065
331 Ga0075433_10027445
332 Ga0099794_10005900
333 Ga0099795_10012453
334 Ga0105240_10027741
335 Ga0105240_10043686
336 Ga0105240_10183512
337 Ga0111539_10239927
338 Ga0114129_10048839
339 Ga0105239_10208422
340 Ga0157369_10033349
341 Ga0157372_10021107
342 Ga0157375_10128933
343 Ga0182008_10000506
344 Ga0213875_10037634
345 Ga0209566_100660
346 Ga0209674_101255
347 Ga0209672_100093
348 Ga0209147_100074
349 Ga0209147_100134
350 Ga0209258_100209
351 Ga0209148_1000184
352 Ga0209455_1000160
353 Ga0209675_1001015
354 Ga0209025_1001674
355 Ga0209025_1001694
356 Ga0209564_1000048
357 Ga0209564_1000838
358 Ga0209758_1000715
359 Ga0209256_1000041
360 Ga0207647_10010381
361 Ga0207707_10010502
362 Ga0207695_10021144
363 Ga0207663_10019307
364 Ga0207652_10159550
365 Ga0207646_10055604
366 Ga0207646_10198246
367 Ga0207700_10001272
368 Ga0207664_10001683
369 Ga0207664_10104924
370 Ga0207665_10081869
371 Ga0207640_10129129
372 Ga0207658_10000074
373 Ga0207658_10001014
374 Ga0207703_10168389
375 Ga0207678_10062355
376 Ga0207641_10000883
377 Ga0207698_10011600
378 Ga0268266_10041392
379 Ga0268264_10000161
380 Ga0307515_10206787
381 Ga0265338_10088533
382 Ga0265339_10015767
383 Ga0307408_100032475
384 Ga0265314_10115338
385 Ga0307516_10024611
386 Ga0307412_10015597
387 Ga0373953_0035492
388 Ga0373927_0022669
389 Ga0373947_0110700
390 Ga0373937_0119041
391 Ga0373925_0031930
392 Ga0395900_0058427
393 Ga0395900_0111784
394 Ga0395905_0199908
395 Ga0436364_0704198
396 Ga0436364_1098943
397 Ga0436364_1562850
398 Ga0395901_0000004
399 Ga0237819_00680
400 Ga0436360_0108989
401 Ga0466972_0038636
402 Ga0466977_0003279
403 Ga0466963_0010294
404 Ga0495629_0000037
405 Ga0495653_0000048
406 Ga0495664_0083607
407 Ga0495583_0003335
408 Ga0495628_0011073
409 Ga0495648_0000094
410 Ga0495648_0023663
411 Ga0495640_0061211
412 Ga0495609_0032724
413 Ga0495645_0002149
414 Ga0495622_0000490
415 Ga0495661_0003460
416 Ga0495646_0032129
417 Ga0495624_0001218
418 Ga0495674_0002056
419 Ga0495674_0005323
420 Ga0495672_0000866
421 Ga0495672_0023046
422 Ga0495673_0003294
423 Ga0495673_0010746
424 Ga0495593_0009614
425 Ga0495614_0040277
426 Ga0496101_0081702
427 Ga0496104_0064242
428 Ga0496105_0096032
429 Ga0496106_0037682
430 Ga0496106_0095356
431 Ga0496110_0087747
432 Ga0496114_0096123
433 Ga0496114_0097111
434 Ga0496115_0014592
435 Ga0496116_0019766
436 Ga0496117_0017567
437 Ga0496117_0027643
438 Ga0496117_0058089
439 Ga0496118_0007612
440 Ga0496118_0042766
441 Ga0496118_0047075
442 Ga0496120_0043211
443 Ga0496121_0002143
444 Ga0496121_0054180
445 Ga0496122_0018925
446 Ga0496122_0094855
447 Ga0496123_0005902
448 Ga0496124_0096737
449 Ga0496125_0001744
450 Ga0496125_0003766
451 Ga0496125_0106326
452 Ga0496126_0005352
453 Ga0496126_0009239
454 Ga0496126_0036954
455 Ga0496126_0038631
456 Ga0496126_0052038
457 Ga0501031_0075400
458 Ga0501032_0044212
459 Ga0501032_0047261
460 Ga0501033_0001953
461 Ga0501033_0008314
462 Ga0501033_0030253
463 Ga0501033_0044623
464 Ga0501034_0001734
465 Ga0501034_0040138
466 Ga0501034_0070890
467 Ga0501034_0093018
468 Ga0501034_0145883
469 Ga0501036_0028439
470 Ga0501036_0051056
471 Ga0501037_0071827
472 Ga0501038_0028764
473 Ga0501038_0031170
474 Ga0501039_0020846
475 Ga0501039_0048040
476 Ga0501043_0004712
477 Ga0501043_0030269
478 Ga0501047_0037109
479 Ga0501047_0043530
480 Ga0501047_0087017
481 Ga0501047_0127859
482 Ga0501048_0060003
483 Ga0501070_0027109
484 Ga0501073_0112937
485 Ga0501035_0018665
486 Ga0501035_0028832
487 Ga0501035_0078866
488 Ga0501044_0000337
489 Ga0501044_0018973
490 Ga0501044_0025897
491 Ga0501044_0057559
492 Ga0501045_0064071
493 nmdc:mga03n38_23672_c1
494 nmdc:mga0yw44_10633_c1
495 nmdc:mga06z11_34947_c1
496 nmdc:mga05p37_25583_c1
497 nmdc:mga0qj67_21163_c1
498 nmdc:mga06r32_235497_c1
499 nmdc:mga0a205_40690_c1
500 Ga0495619_0035271
501 Ga0495619_0064191
502 Ga0500556_0000003
503 Ga0500556_0000006
504 Ga0500569_000419
505 Ga0500592_000673
506 Ga0500595_009530
507 Ga0500607_078346
508 Ga0500642_0000004
509 Ga0500652_002175
510 Ga0500559_0000030
511 Ga0500616_0000022
512 Ga0500616_0003245
513 Ga0500622_0002509
514 Ga0500634_0013883
515 2509146927
516 2509149428
517 2513591125
518 2513671218
519 2513671428
520 2514017088
521 2524463909
522 2599735644
523 2600022207
524 2600075481
525 2603858434
526 2623500442
527 2644289104
528 2770199890
529 2776911257
530 2819630324
531 2828307694
532 2840764549
533 2847932455
534 2857526474
535 2863423585
536 2871498382
537 2874617469
538 2878762602
539 2878769569
540 2881153477
541 2885378866
542 2885386897
543 2885418969
544 2888349364
545 2893067284
546 2900643344
547 2903543177
548 2903768632
549 2903769614
550 2908746384
551 2919073709
552 2923562698
553 2924755407
554 2928177766
555 2935650182
556 2935658329
557 2936013259
558 2936021654
559 2936030552
560 2936047848
561 2936057850
562 2937826425
563 2937997030
564 2958167499
565 2961165971
566 2965020790
567 2968174369
568 2970557460
569 2987661978
570 2989350925
571 3004191027
572 8018853157
573 8021121136
574 8056682530

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03241

HpaB

4-hydroxyphenylacetate 3-hydroxylase C terminal

306

506

0.98

PF11794

HpaB_N

4-hydroxyphenylacetate 3-hydroxylase N terminal

33

299

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yyi-assembly1.cif.gz_A crystal structure of the oxygenase component (hpab) of 4-hydroxyphenylacetate 3-monooxygenase complexed with fad 0.9339 49 399
2yyl-assembly1.cif.gz_A crystal structure of the mutant of hpab (t198i, a276g, and r466h) complexed with fad 0.9327 49 401
2yyj-assembly1.cif.gz_A crystal structure of the oxygenase component (hpab) of 4-hydroxyphenylacetate 3-monooxygenase complexed with fad and 4-hydroxyphenylacetate 0.9249 49 401
6qyi-assembly1.cif.gz_B structure of hpab from e.coli in complex with fad 0.9244 48 405
6qyi-assembly1.cif.gz_A structure of hpab from e.coli in complex with fad 0.9235 48 405
ID Description Score Start End Superfamily
2yygA03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9162 196 401 1.20.140.10
2yygA03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.8876 196 401 1.20.140.10
3hwcB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.878 201 380 1.20.140.10
2yygA02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8756 67 195 2.40.110.10
2yygA02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8624 67 195 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A528HYA1-F1-model_v4 4-hydroxyphenylacetate 3-monooxygenase 0.9755 101 316 GO:0004497
GO:0016627
AF-A0A853R0E9-F1-model_v4 deleted 0.9684 85 409
AF-A0A0U3ADP7-F1-model_v4 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase 0.9683 98 360 GO:0004497
GO:0016627
AF-A0A853R0E9-F1-model_v4 deleted 0.9655 85 409
AF-A0A2E6PK75-F1-model_v4 4-hydroxyphenylacetate 3-monooxygenase 0.9624 49 404 GO:0004497
GO:0016627

Map