F388231

General Info

Members Datasets Scaffolds Average Seq Length
287 221 574 531

Family's Representative Sequence

Representative Sequence 3300048925|Ga0496122_0044697|Ga0496122_0044697_1661_3412
Length 583
Sequence VEQAAEGGYLHLPPLSWQDQMNPRCLESAEKAAATKHRRTPIATAARECSLMKTYQNLLSAALIAVALNSTAITAVFAKTLIYCSEASPEMFDAAQTTSGAVYDASARNLSNGLVKIKRGSTELEPGLAESWDVSADGKEYIFHLRKGVKFHTTSYFTPTRDFNADDVIFSFERQGNKDNPYYNQGTWPQYGAYSFPTLIEKIERIDDNTVKFVLTRPEATFIPSLSLTFAVIQSKEYGDKLVAENRIVEFSQQPIGTGPYQFVAYQKDSAIRYQANPDYWGGKQKIDNLIFAITPDAAVRHQKLSSGECHVIAAPNPADIAEMKKDPAIEMQNKEGLNLSFLAYNTQQKPFDDVRVRKALNMAVNKPAIIDAVYLGSAVVSVNPLPPSVWGYNKAVKDDAYDPEQARKLLEEAGVKDLKMKIWAMPVQRPYMPNARRAAELIQADFAKVGVTADIVSYDWGEYLKRSLEKDRDGAVMLGWTGGIADPDNFLAALLSCQAVGSANRANWCDQDFEKLIQAAKLTTDQAERSRLYQQAQLVFKEQAPWLTIAHQIVEQPVSKKVKNFRIDPFGGYLFEDVDIEE

Samples

Sample ID Description Type Environment
1 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
20 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
24 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
28 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
29 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
30 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
31 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
32 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
33 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
35 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
39 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
45 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
47 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
48 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
49 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
50 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
64 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
69 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
70 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
71 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
72 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
73 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
74 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
75 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
76 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
77 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
78 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
91 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
102 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
103 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
104 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
105 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
106 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
107 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
108 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
109 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
110 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
111 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
112 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
113 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
116 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
120 2512875024
121 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
122 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
123 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
124 2537561587 Agrobacterium tumefaciens Cherry 2E-2-2 Isolate Rhizosphere
125 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
126 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
127 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
128 2599185210 Rhizobium sp. NFACC06-2 Isolate Rhizoplane
129 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
130 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
131 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
132 2643221557 Ensifer sp. Root558 Isolate Unclassified
133 2643221582 Rhizobium sp. Root651 Isolate Unclassified
134 2643221610 Ensifer sp. Root74 Isolate Unclassified
135 2643221618 Ensifer sp. Root231 Isolate Unclassified
136 2643221626 Ensifer sp. Root31 Isolate Unclassified
137 2643221655 Ensifer sp. Root1252 Isolate Unclassified
138 2643221659 Ensifer sp. Root127 Isolate Unclassified
139 2643221668 Ensifer sp. Root423 Isolate Unclassified
140 2643221675 Ensifer sp. Root1298 Isolate Unclassified
141 2643221680 Ensifer sp. Root1312 Isolate Unclassified
142 2643221693 Rhizobium sp. Root491 Isolate Unclassified
143 2643221698 Ensifer sp. Root142 Isolate Unclassified
144 2643221712 Ensifer sp. Root258 Isolate Unclassified
145 2643221723 Ensifer sp. Root278 Isolate Unclassified
146 2643221726 Ensifer sp. Root954 Isolate Unclassified
147 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
148 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
149 2751185800 Brucella pituitosa AA2 Isolate Unclassified
150 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
151 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
152 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
153 2818991439 Agrobacterium tumefaciens 1187 Isolate Unclassified
154 2834578030 Paracoccus thiocyanatus SST Isolate Unclassified
155 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
156 2838675328 Agrobacterium radiobacter SEMIA 410 Isolate Nodule
157 2838714209 Agrobacterium radiobacter SEMIA 435 Isolate Nodule
158 2838719591 Agrobacterium radiobacter SEMIA 436 Isolate Nodule
159 2838724970 Agrobacterium radiobacter SEMIA 437 Isolate Nodule
160 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
161 2841846520 Agrobacterium radiobacter SEMIA 440 Isolate Nodule
162 2841859092 Agrobacterium radiobacter SEMIA 4026 Isolate Nodule
163 2842124991 Agrobacterium radiobacter SEMIA 434 Isolate Nodule
164 2842130223 Agrobacterium radiobacter SEMIA 441 Isolate Nodule
165 2842152218 Agrobacterium radiobacter SEMIA 457 Isolate Nodule
166 2842170452 Agrobacterium radiobacter SEMIA 461 Isolate Nodule
167 2842175837 Agrobacterium radiobacter SEMIA 462 Isolate Nodule
168 2842187318 Agrobacterium radiobacter SEMIA 464 Isolate Nodule
169 2842211629 Agrobacterium radiobacter SEMIA 472 Isolate Nodule
170 2842224351 Agrobacterium radiobacter SEMIA 480 Isolate Nodule
171 2842515876 Agrobacterium radiobacter SEMIA 4072 Isolate Nodule
172 2854911287 Brucella lupini LUP21 Isolate Unclassified
173 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
174 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
175 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
176 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
177 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
178 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
179 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
180 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
181 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
182 2899792073 Agrobacterium deltaense CNPSo 3391 Isolate Nodule
183 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
184 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
185 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
186 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
187 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
188 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
189 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
190 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
191 2933006813 Rhizobium sp. SEMIA 439 Isolate Unclassified
192 2933011516 Rhizobium sp. SEMIA 4032 Isolate Unclassified
193 2933594066 Agrobacterium fabrum 35/80 Isolate Nodule
194 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
195 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
196 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
197 2952252522 Salinicola sp. DM10 Isolate Unclassified
198 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
199 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
200 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
201 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
202 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
203 2977828996 Mesorhizobium sp. M4B.F.Ca.ET.089.01.1.1 Isolate Nodule
204 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
205 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
206 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
207 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
208 2984509177 Agrobacterium pusense SORGH_AS260 Isolate Aerial Root
209 2984518228 Agrobacterium pusense SORGH_AS285 Isolate Aerial Root
210 2984537506 Agrobacterium sp. SORGH_AS440 Isolate Aerial Root
211 2984601300 Rhizobium pusense SORGH_AS1083 Isolate Aerial Root
212 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
213 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere
214 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
215 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
216 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
217 8003570095 Agrobacterium rhizogenes GBBC3284 Isolate Unclassified
218 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
219 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
220 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified
221 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 58.89
Metatranscriptomes 3.48
Isolates 37.63

Biome Distribution

Category Percentage (%)
Aerial Root 1.39
Bulb 0
Endosphere 16.03
Nodule 14.29
Rhizoplane 1.39
Rhizosphere 42.86
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496122_0044697 3300048925 Bacteria 3453
2 JGI25158J39367_1001704 3300002739 Bacteria 3768
3 JGI25159J45721_1000335 3300002987 Bacteria 21698
4 JGI25151J46595_10015442 3300003187 Bacteria 3365
5 JGI25165J46597_1002298 3300003214 Bacteria 6520
6 JGI25160J50197_1000538 3300003354 Bacteria 21698
7 Ga0006562J51391_1007027 3300003578 Bacteria 5745
8 Ga0006562J51391_1027265 3300003578 Bacteria 3618
9 Ga0055526_1000883 3300003771 Bacteria 22295
10 Ga0055524_1000581 3300003775 Bacteria 26755
11 Ga0055536_1002350 3300003781 Bacteria 10708
12 Ga0055543_1000561 3300004625 Bacteria 20685
13 Ga0065165_1000196 3300005262 Bacteria 104569
14 Ga0070659_100154063 3300005366 Bacteria 1876
15 Ga0070663_100044172 3300005455 Bacteria 3140
16 Ga0070665_100004646 3300005548 Bacteria 14351
17 Ga0070665_100089084 3300005548 Bacteria 3092
18 Ga0075368_10002112 3300006042 Bacteria 6414
19 Ga0075363_100000764 3300006048 Bacteria 11024
20 Ga0075363_100010439 3300006048 Bacteria 4413
21 Ga0075363_100018564 3300006048 Bacteria 3468
22 Ga0075363_100021187 3300006048 Bacteria 3270
23 Ga0075364_10009645 3300006051 Bacteria 5800
24 Ga0075362_10008202 3300006177 Bacteria 3986
25 Ga0075369_10011716 3300006186 Bacteria 3453
26 Ga0075366_10006595 3300006195 Bacteria 6369
27 Ga0075370_10003374 3300006353 Bacteria 7587
28 Ga0099826_10001282 3300006948 Bacteria 14779
29 Ga0157373_10037105 3300013100 Bacteria 3496
30 Ga0157371_10000235 3300013102 Bacteria 79378
31 Ga0157370_10002006 3300013104 Bacteria 25031
32 Ga0157370_10123224 3300013104 Bacteria 2420
33 Ga0171463_1013 3300013249 Bacteria 94945
34 Ga0183363_1131 3300015690 Bacteria 19060
35 Ga0209436_100761 3300025208 Bacteria 13349
36 Ga0207427_102189 3300025231 Bacteria 5544
37 Ga0209233_1001982 3300025261 Bacteria 7758
38 Ga0209130_1000075 3300025284 Bacteria 171698
39 Ga0209676_1003195 3300025292 Bacteria 10393
40 Ga0209025_1000277 3300025294 Bacteria 117930
41 Ga0209025_1005830 3300025294 Bacteria 9864
42 Ga0209564_1000869 3300025295 Bacteria 40151
43 Ga0209050_1003033 3300025298 Bacteria 12956
44 Ga0209256_1000828 3300025299 Bacteria 39174
45 Ga0209256_1007219 3300025299 Bacteria 5560
46 Ga0207426_1000163 3300025302 Bacteria 171698
47 Ga0209257_1002128 3300025304 Bacteria 20658
48 Ga0207647_10010500 3300025904 Bacteria 6540
49 Ga0207678_10022811 3300026067 Bacteria 5481
50 Ga0207648_10066084 3300026089 Bacteria 3154
51 Ga0209371_1000035 3300027312 Bacteria 368979
52 Ga0209371_1001482 3300027312 Bacteria 15675
53 Ga0209282_1000173 3300027666 Bacteria 36304
54 Ga0268266_10004228 3300028379 Bacteria 13826
55 Ga0265318_10009174 3300028577 Bacteria 4363
56 Ga0307515_10000252 3300028794 Bacteria 132500
57 Ga0268256_1000037 3300030500 Bacteria 367024
58 Ga0316181_1025740 3300030744 Bacteria 2979
59 Ga0265340_10019311 3300031247 Bacteria 3509
60 Ga0265339_10027829 3300031249 Bacteria 3220
61 Ga0265316_10014272 3300031344 Bacteria 7001
62 Ga0265316_10048811 3300031344 Bacteria 3338
63 Ga0265313_10004919 3300031595 Bacteria 10013
64 Ga0265313_10020109 3300031595 Bacteria 3692
65 Ga0265314_10014400 3300031711 Bacteria 6332
66 Ga0265342_10005039 3300031712 Bacteria 10191
67 Ga0265342_10015016 3300031712 Bacteria 5113
68 Ga0316576_10005626 3300031727 Bacteria 7693
69 Ga0316576_10022759 3300031727 Bacteria 4356
70 Ga0316592_1003633 3300033524 Bacteria 2799
71 Ga0316586_1003262 3300033527 Bacteria 2115
72 Ga0316588_1004999 3300033528 Bacteria 2552
73 Ga0316588_1009381 3300033528 Bacteria 2040
74 Ga0316588_1010314 3300033528 Bacteria 1967
75 Ga0316588_1012291 3300033528 Bacteria 1844
76 Ga0316574_0000091 3300035398 Bacteria 25911
77 Ga0316574_0010606 3300035398 Bacteria 5211
78 Ga0316574_0055001 3300035398 Bacteria 2487
79 Ga0373935_0097351 3300035692 Bacteria 1935
80 Ga0373927_0000253 3300035695 Bacteria 42014
81 Ga0316584_0044154 3300036712 Bacteria 3324
82 Ga0373925_0004876 3300037068 Bacteria 10098
83 Ga0395899_0025498 3300037312 Bacteria 4463
84 Ga0453684_0006877 3300044712 Bacteria 21353
85 Ga0453684_0013399 3300044712 Bacteria 13323
86 Ga0495606_0013800 3300046507 Bacteria 6352
87 Ga0495588_0001431 3300046674 Bacteria 10213
88 Ga0496116_0000582 3300048919 Bacteria 48827
89 Ga0496116_0004319 3300048919 Bacteria 13599
90 Ga0496117_0000066 3300048920 Bacteria 253534
91 Ga0496118_0000231 3300048921 Bacteria 97930
92 Ga0496119_0004810 3300048922 Bacteria 13249
93 Ga0496119_0008996 3300048922 Bacteria 8668
94 Ga0496120_0000463 3300048923 Bacteria 64041
95 Ga0496121_0013383 3300048924 Bacteria 8823
96 Ga0496122_0000057 3300048925 Bacteria 253452
97 Ga0496122_0004319 3300048925 Bacteria 17795
98 Ga0496122_0008931 3300048925 Bacteria 10662
99 Ga0496122_0012514 3300048925 Bacteria 8435
100 Ga0496122_0040512 3300048925 Bacteria 3700
101 Ga0496122_0053382 3300048925 Bacteria 3047
102 Ga0496122_0060864 3300048925 Bacteria 2777
103 Ga0496123_0000401 3300048926 Bacteria 79665
104 Ga0496124_0012645 3300048927 Bacteria 8304
105 Ga0496124_0027157 3300048927 Bacteria 5144
106 Ga0496125_0000101 3300048928 Bacteria 202248
107 Ga0496125_0000830 3300048928 Bacteria 49880
108 Ga0496125_0001132 3300048928 Bacteria 40590
109 Ga0496125_0002530 3300048928 Bacteria 23601
110 Ga0496125_0014393 3300048928 Bacteria 7706
111 Ga0496125_0062985 3300048928 Bacteria 2961
112 Ga0501032_0011231 3300049569 Bacteria 6433
113 Ga0501033_0002859 3300049570 Bacteria 14469
114 Ga0501033_0075942 3300049570 Bacteria 2466
115 Ga0501034_0000088 3300049571 Bacteria 166615
116 Ga0501034_0000160 3300049571 Bacteria 126787
117 Ga0501034_0014101 3300049571 Bacteria 8234
118 Ga0501034_0022248 3300049571 Bacteria 6461
119 Ga0501036_0201414 3300049572 Bacteria 1674
120 Ga0501037_0000283 3300049573 Bacteria 43184
121 Ga0501037_0041052 3300049573 Bacteria 3403
122 Ga0501038_0016237 3300049574 Bacteria 6751
123 Ga0501038_0061906 3300049574 Bacteria 3200
124 Ga0501039_0026891 3300049575 Bacteria 4423
125 Ga0501040_0002102 3300049576 Bacteria 12831
126 Ga0501041_0063909 3300049577 Bacteria 2254
127 Ga0501042_0011601 3300049578 Bacteria 5951
128 Ga0501043_0000005 3300049579 Bacteria 254466
129 Ga0501047_0032264 3300049581 Bacteria 5055
130 Ga0501047_0033349 3300049581 Bacteria 4970
131 Ga0501047_0063910 3300049581 Bacteria 3550
132 Ga0501047_0161313 3300049581 Bacteria 2114
133 Ga0501069_0000033 3300049585 Bacteria 92477
134 Ga0501070_0000055 3300049586 Bacteria 99156
135 Ga0501070_0000949 3300049586 Bacteria 26162
136 Ga0501070_0003497 3300049586 Bacteria 13608
137 Ga0501070_0029997 3300049586 Bacteria 4557
138 Ga0501070_0052484 3300049586 Bacteria 3384
139 Ga0501072_0029164 3300049588 Bacteria 4308
140 Ga0501073_0013274 3300049589 Bacteria 6002
141 Ga0501073_0041427 3300049589 Bacteria 3254
142 Ga0501074_0000053 3300049590 Bacteria 56031
143 Ga0501074_0040047 3300049590 Bacteria 3394
144 Ga0501075_0001061 3300049591 Bacteria 17681
145 Ga0501079_0005333 3300049741 Bacteria 9568
146 Ga0501080_0000448 3300049742 Bacteria 32030
147 Ga0501080_0007173 3300049742 Bacteria 10058
148 Ga0501080_0022084 3300049742 Bacteria 5896
149 Ga0501080_0068293 3300049742 Bacteria 3306
150 Ga0501083_0000063 3300049744 Bacteria 74976
151 Ga0501083_0023398 3300049744 Bacteria 4285
152 Ga0501035_0000086 3300049822 Bacteria 115822
153 Ga0501035_0000288 3300049822 Bacteria 59750
154 Ga0501035_0002104 3300049822 Bacteria 19786
155 Ga0501035_0067368 3300049822 Bacteria 3177
156 Ga0501044_0000242 3300049823 Bacteria 69190
157 Ga0501044_0004354 3300049823 Bacteria 15856
158 Ga0501044_0036505 3300049823 Bacteria 5142
159 Ga0501045_0018013 3300049824 Bacteria 5015
160 nmdc:mga03683_4299_c1 3300050489 Bacteria 4706
161 nmdc:mga03n38_2536_c1 3300050490 Bacteria 5666
162 nmdc:mga00v17_59_c1 3300050491 Bacteria 36576
163 nmdc:mga0yw44_1407_c1 3300050492 Bacteria 9536
164 nmdc:mga06z11_23005_c1 3300050494 Bacteria 2921
165 nmdc:mga07m45_850_c1 3300050496 Bacteria 13267
166 nmdc:mga0sz30_2400_c1 3300050516 Bacteria 6685
167 nmdc:mga0sz30_6227_c1 3300050516 Bacteria 4424
168 Ga0500608_002146 3300053122 Bacteria 7080
169 Ga0500559_0013105 3300053136 Bacteria 3516
170 Ga0500604_0002396 3300053151 Bacteria 5119
171 Ga0500620_000274 3300053155 Bacteria 9968
172 Ga0500622_0000466 3300053156 Bacteria 38413
173 Ga0501084_0004721 3300054114 Bacteria 11133
174 Ga0501084_0026830 3300054114 Bacteria 4811
175 Ga0590071_005420 3300059421 Bacteria 3065
176 Ga0587090_000081 3300059510 Bacteria 5561
177 Ga0587072_000363 3300059643 Bacteria 4387
178 Ga0501082_0007030 3300060353 Bacteria 9711
179 Ga0501082_0114755 3300060353 Bacteria 2332
180 2503198741 2503198000 Bacteria 6884444
181 2512962058 2512875024 Bacteria 7195110
182 2514039136 2513237164 Bacteria 7563725
183 2523469729 2523231067 Bacteria 5230452
184 2535518465 2534681796 Bacteria 7146037
185 2537875723 2537561587 Bacteria 5425293
186 2554244849 2554235003 Bacteria 5877155
187 2559297317 2558860242 Bacteria 5568029
188 2585203983 2582581294 Bacteria 6626667
189 2599605865 2599185210 Bacteria 5624189
190 2600194444 2599185352 Bacteria 7228948
191 2601611580 2600255279 Bacteria 5605316
192 2601748868 2600255308 Bacteria 5611129
193 2643806937 2643221557 Bacteria 7184309
194 2643921858 2643221582 Bacteria 5804683
195 2644068081 2643221610 Bacteria 7480339
196 2644106510 2643221618 Bacteria 7717186
197 2644149251 2643221626 Bacteria 8069654
198 2644308392 2643221655 Bacteria 7722067
199 2644332105 2643221659 Bacteria 7890716
200 2644380040 2643221668 Bacteria 7306521
201 2644418989 2643221675 Bacteria 7473456
202 2644452370 2643221680 Bacteria 7473610
203 2644519826 2643221693 Bacteria 5513853
204 2644544478 2643221698 Bacteria 7756764
205 2644615780 2643221712 Bacteria 7729434
206 2644673295 2643221723 Bacteria 7095460
207 2644688238 2643221726 Bacteria 7455827
208 2671694236 2671180139 Bacteria 4196045
209 2739348953 2738543031 Bacteria 5769731
210 2753356969 2751185800 Bacteria 5467370
211 2753359921 2751185800 Bacteria 5467370
212 2753361522 2751185800 Bacteria 5467370
213 2757571795 2757320392 Bacteria 3737298
214 2758637998 2758568016 Bacteria 5645291
215 2758640559 2758568016 Bacteria 5645291
216 2758642241 2758568016 Bacteria 5645291
217 2808988725 2808606387 Bacteria 5697198
218 2819561411 2818991439 Bacteria 6907412
219 2834579390 2834578030 Bacteria 3530182
220 2837651122 2837651117 Bacteria 3772164
221 2838679436 2838675328 Bacteria 4909118
222 2838718793 2838714209 Bacteria 5525906
223 2838723791 2838719591 Bacteria 5523910
224 2838729114 2838724970 Bacteria 4908691
225 2840766673 2840764183 Bacteria 6358399
226 2841851118 2841846520 Bacteria 5345850
227 2841863923 2841859092 Bacteria 5436171
228 2842129811 2842124991 Bacteria 5346824
229 2842134445 2842130223 Bacteria 4909145
230 2842156441 2842152218 Bacteria 4908957
231 2842175038 2842170452 Bacteria 5525737
232 2842179955 2842175837 Bacteria 4908771
233 2842191627 2842187318 Bacteria 5524014
234 2842215944 2842211629 Bacteria 5523832
235 2842228556 2842224351 Bacteria 5524473
236 2842520705 2842515876 Bacteria 5436280
237 2854912578 2854911287 Bacteria 5582813
238 2854915716 2854911287 Bacteria 5582813
239 2871491086 2871488783 Bacteria 6929816
240 2878755495 2878753008 Bacteria 6922523
241 2881867811 2881861095 Bacteria 7128710
242 2885324350 2885318864 Bacteria 6729568
243 2888343359 2888337043 Bacteria 6629336
244 2889916254 2889914905 Bacteria 5702301
245 2891048590 2891048133 Bacteria 4447501
246 2898795467 2898795034 Bacteria 4294459
247 2899262365 2899259804 Bacteria 3320927
248 2899794658 2899792073 Bacteria 4926588
249 2899850403 2899845264 Bacteria 5672268
250 2903499030 2903492973 Bacteria 13473544
251 2915653300 2915650412 Bacteria 4288180
252 2919118833 2919114240 Bacteria 5700270
253 2919679090 2919679072 Bacteria 4629602
254 2924791532 2924784321 Bacteria 7416538
255 2926758146 2926754445 Bacteria 5964435
256 2926764287 2926760298 Bacteria 5505990
257 2933011215 2933006813 Bacteria 4912075
258 2933016245 2933011516 Bacteria 5439334
259 2933598958 2933594066 Bacteria 5594265
260 2937826462 2937822353 Bacteria 7290551
261 2937844881 2937843397 Bacteria 5256375
262 2941505254 2941499720 Bacteria 7599444
263 2952255966 2952252522 Bacteria 4171745
264 2961176561 2961170736 Bacteria 7072258
265 2968001422 2967996073 Bacteria 6787468
266 2968007475 2968003550 Bacteria 6929263
267 2970509232 2970503327 Bacteria 7099517
268 2977824635 2977821940 Bacteria 6906439
269 2977831900 2977828996 Bacteria 7007971
270 2979090611 2979089926 Bacteria 5670289
271 2979096135 2979095461 Bacteria 5669583
272 2979101663 2979100975 Bacteria 5423623
273 2979813911 2979808191 Bacteria 7179355
274 2984510385 2984509177 Bacteria 5274802
275 2984518911 2984518228 Bacteria 5277463
276 2984538733 2984537506 Bacteria 5277481
277 2984605440 2984601300 Bacteria 5455244
278 2995394347 2995392953 Bacteria 4539380
279 3000019357 3000017691 Bacteria 3772574
280 3002145714 3002141150 Bacteria 5254435
281 650843749 650716007 Bacteria 5573770
282 8002290676 8002285264 Bacteria 6717907
283 8003573990 8003570095 Bacteria 5747666
284 8004377074 8004374579 Bacteria 6898112
285 8005549385 8005542996 Bacteria 7077758
286 8045864444 8045864390 Bacteria 5043873
287 8054565028 8054563764 Bacteria 5592885
288 Ga0496122_0044697
289 JGI25158J39367_1001704
290 JGI25159J45721_1000335
291 JGI25151J46595_10015442
292 JGI25165J46597_1002298
293 JGI25160J50197_1000538
294 Ga0006562J51391_1007027
295 Ga0006562J51391_1027265
296 Ga0055526_1000883
297 Ga0055524_1000581
298 Ga0055536_1002350
299 Ga0055543_1000561
300 Ga0065165_1000196
301 Ga0070659_100154063
302 Ga0070663_100044172
303 Ga0070665_100004646
304 Ga0070665_100089084
305 Ga0075368_10002112
306 Ga0075363_100000764
307 Ga0075363_100010439
308 Ga0075363_100018564
309 Ga0075363_100021187
310 Ga0075364_10009645
311 Ga0075362_10008202
312 Ga0075369_10011716
313 Ga0075366_10006595
314 Ga0075370_10003374
315 Ga0099826_10001282
316 Ga0157373_10037105
317 Ga0157371_10000235
318 Ga0157370_10002006
319 Ga0157370_10123224
320 Ga0171463_1013
321 Ga0183363_1131
322 Ga0209436_100761
323 Ga0207427_102189
324 Ga0209233_1001982
325 Ga0209130_1000075
326 Ga0209676_1003195
327 Ga0209025_1000277
328 Ga0209025_1005830
329 Ga0209564_1000869
330 Ga0209050_1003033
331 Ga0209256_1000828
332 Ga0209256_1007219
333 Ga0207426_1000163
334 Ga0209257_1002128
335 Ga0207647_10010500
336 Ga0207678_10022811
337 Ga0207648_10066084
338 Ga0209371_1000035
339 Ga0209371_1001482
340 Ga0209282_1000173
341 Ga0268266_10004228
342 Ga0265318_10009174
343 Ga0307515_10000252
344 Ga0268256_1000037
345 Ga0316181_1025740
346 Ga0265340_10019311
347 Ga0265339_10027829
348 Ga0265316_10014272
349 Ga0265316_10048811
350 Ga0265313_10004919
351 Ga0265313_10020109
352 Ga0265314_10014400
353 Ga0265342_10005039
354 Ga0265342_10015016
355 Ga0316576_10005626
356 Ga0316576_10022759
357 Ga0316592_1003633
358 Ga0316586_1003262
359 Ga0316588_1004999
360 Ga0316588_1009381
361 Ga0316588_1010314
362 Ga0316588_1012291
363 Ga0316574_0000091
364 Ga0316574_0010606
365 Ga0316574_0055001
366 Ga0373935_0097351
367 Ga0373927_0000253
368 Ga0316584_0044154
369 Ga0373925_0004876
370 Ga0395899_0025498
371 Ga0453684_0006877
372 Ga0453684_0013399
373 Ga0495606_0013800
374 Ga0495588_0001431
375 Ga0496116_0000582
376 Ga0496116_0004319
377 Ga0496117_0000066
378 Ga0496118_0000231
379 Ga0496119_0004810
380 Ga0496119_0008996
381 Ga0496120_0000463
382 Ga0496121_0013383
383 Ga0496122_0000057
384 Ga0496122_0004319
385 Ga0496122_0008931
386 Ga0496122_0012514
387 Ga0496122_0040512
388 Ga0496122_0053382
389 Ga0496122_0060864
390 Ga0496123_0000401
391 Ga0496124_0012645
392 Ga0496124_0027157
393 Ga0496125_0000101
394 Ga0496125_0000830
395 Ga0496125_0001132
396 Ga0496125_0002530
397 Ga0496125_0014393
398 Ga0496125_0062985
399 Ga0501032_0011231
400 Ga0501033_0002859
401 Ga0501033_0075942
402 Ga0501034_0000088
403 Ga0501034_0000160
404 Ga0501034_0014101
405 Ga0501034_0022248
406 Ga0501036_0201414
407 Ga0501037_0000283
408 Ga0501037_0041052
409 Ga0501038_0016237
410 Ga0501038_0061906
411 Ga0501039_0026891
412 Ga0501040_0002102
413 Ga0501041_0063909
414 Ga0501042_0011601
415 Ga0501043_0000005
416 Ga0501047_0032264
417 Ga0501047_0033349
418 Ga0501047_0063910
419 Ga0501047_0161313
420 Ga0501069_0000033
421 Ga0501070_0000055
422 Ga0501070_0000949
423 Ga0501070_0003497
424 Ga0501070_0029997
425 Ga0501070_0052484
426 Ga0501072_0029164
427 Ga0501073_0013274
428 Ga0501073_0041427
429 Ga0501074_0000053
430 Ga0501074_0040047
431 Ga0501075_0001061
432 Ga0501079_0005333
433 Ga0501080_0000448
434 Ga0501080_0007173
435 Ga0501080_0022084
436 Ga0501080_0068293
437 Ga0501083_0000063
438 Ga0501083_0023398
439 Ga0501035_0000086
440 Ga0501035_0000288
441 Ga0501035_0002104
442 Ga0501035_0067368
443 Ga0501044_0000242
444 Ga0501044_0004354
445 Ga0501044_0036505
446 Ga0501045_0018013
447 nmdc:mga03683_4299_c1
448 nmdc:mga03n38_2536_c1
449 nmdc:mga00v17_59_c1
450 nmdc:mga0yw44_1407_c1
451 nmdc:mga06z11_23005_c1
452 nmdc:mga07m45_850_c1
453 nmdc:mga0sz30_2400_c1
454 nmdc:mga0sz30_6227_c1
455 Ga0500608_002146
456 Ga0500559_0013105
457 Ga0500604_0002396
458 Ga0500620_000274
459 Ga0500622_0000466
460 Ga0501084_0004721
461 Ga0501084_0026830
462 Ga0590071_005420
463 Ga0587090_000081
464 Ga0587072_000363
465 Ga0501082_0007030
466 Ga0501082_0114755
467 2503198741
468 2512962058
469 2514039136
470 2523469729
471 2535518465
472 2537875723
473 2554244849
474 2559297317
475 2585203983
476 2599605865
477 2600194444
478 2601611580
479 2601748868
480 2643806937
481 2643921858
482 2644068081
483 2644106510
484 2644149251
485 2644308392
486 2644332105
487 2644380040
488 2644418989
489 2644452370
490 2644519826
491 2644544478
492 2644615780
493 2644673295
494 2644688238
495 2671694236
496 2739348953
497 2753356969
498 2753359921
499 2753361522
500 2757571795
501 2758637998
502 2758640559
503 2758642241
504 2808988725
505 2819561411
506 2834579390
507 2837651122
508 2838679436
509 2838718793
510 2838723791
511 2838729114
512 2840766673
513 2841851118
514 2841863923
515 2842129811
516 2842134445
517 2842156441
518 2842175038
519 2842179955
520 2842191627
521 2842215944
522 2842228556
523 2842520705
524 2854912578
525 2854915716
526 2871491086
527 2878755495
528 2881867811
529 2885324350
530 2888343359
531 2889916254
532 2891048590
533 2898795467
534 2899262365
535 2899794658
536 2899850403
537 2903499030
538 2915653300
539 2919118833
540 2919679090
541 2924791532
542 2926758146
543 2926764287
544 2933011215
545 2933016245
546 2933598958
547 2937826462
548 2937844881
549 2941505254
550 2952255966
551 2961176561
552 2968001422
553 2968007475
554 2970509232
555 2977824635
556 2977831900
557 2979090611
558 2979096135
559 2979101663
560 2979813911
561 2984510385
562 2984518911
563 2984538733
564 2984605440
565 2995394347
566 3000019357
567 3002145714
568 650843749
569 8002290676
570 8003573990
571 8004377074
572 8005549385
573 8045864444
574 8054565028

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00496

SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

123

503

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1dpp-assembly4.cif.gz_G dipeptide binding protein complex with glycyl-l-leucine 0.9817 32 538
1dpp-assembly4.cif.gz_G dipeptide binding protein complex with glycyl-l-leucine 0.9798 32 538
5f1q-assembly2.cif.gz_B crystal structure of periplasmic dipeptide transport protein from yersinia pestis 0.9797 32 538
5f1q-assembly2.cif.gz_B crystal structure of periplasmic dipeptide transport protein from yersinia pestis 0.9778 32 538
3m8u-assembly1.cif.gz_A crystal structure of glutathione-binding protein a (gbpa) from haemophilus parasuis sh0165 in complex with glutathione disulfide (gssg) 0.9724 32 539
ID Description Score Start End Superfamily
af_P23847_24_252_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.9867 28 255 3.10.105.10
4qflB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9831 215 289 3.40.190.10
3tpaA03 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.9747 293 509 3.10.105.10
af_P23847_24_252_3.10.105.10 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.974 28 255 3.10.105.10
4qfkA03 Alpha Beta;Roll;Dipeptide-binding Protein; domain 3;Dipeptide-binding Protein; Domain 3 0.9704 293 509 3.10.105.10
ID Description Score Start End GO Terms
AF-A0A0F3IHQ5-F1-model_v4 Solute-binding protein family 5 domain-containing protein 0.9872 70 276 GO:0030288
GO:0042938
GO:1904680
AF-I6DMU4-F1-model_v4 Bacterial extracellular solute-binding s, 5 Middle family protein 0.9829 103 436 GO:0030288
GO:0042938
GO:1904680
AF-A0A0F3IHQ5-F1-model_v4 Solute-binding protein family 5 domain-containing protein 0.9825 70 276 GO:0030288
GO:0042938
GO:1904680
AF-A0A4Q3TQI7-F1-model_v4 ABC transporter substrate-binding protein 0.9818 29 163 GO:0030288
GO:0042938
GO:1904680
AF-Q14F37-F1-model_v4 DppA 0.9814 31 190 GO:0030288
GO:0042938
GO:1904680

Map